text stringlengths 185 73.3k | repo stringlengths 7 100 | path stringlengths 4 146 | language stringclasses 7
values | hash stringlengths 16 16 | score float64 7 8.5 | stars int64 0 237k |
|---|---|---|---|---|---|---|
"""Command line interface for subsetting geopackages by catchment ID."""
import argparse
import time
from pathlib import Path
import logging
from data_processing.subset import subset
logger = logging.getLogger(__name__)
def parse_arguments() -> argparse.Namespace:
"""Parse command line arguments."""
parser... | CIROH-UA/NGIAB_data_preprocess | modules/ngiab_data_cli/subset_cli.py | .py | 04da89b1da16c2a7 | 7.62 | 16 |
"""Config-generation regression tests.
Fixture geopackages:
tests/golden/geopackage/cat-1555522_subset.gpkg
tests/golden/geopackage/gage-10109001_subset.gpkg
"""
import difflib
import json
import math
import os
import re
import shutil
from datetime import datetime
from pathlib import Path
import pytest
from... | CIROH-UA/NGIAB_data_preprocess | tests/test_config_generation.py | .py | 3d115f3a95be28cf | 8.12 | 16 |
import logging
import tempfile
from pathlib import Path
import numpy as np
import pandas as pd
import pytest
import xarray as xr
# Import the functions to test
from data_processing.forcings import interpolate_nan_values
# Configure logging
logger = logging.getLogger(__name__)
if not logging.getLogger().hasHandlers()... | CIROH-UA/NGIAB_data_preprocess | tests/test_nan_impute.py | .py | 0e28b7f9da538153 | 8.12 | 16 |
"""Regression (characterization) tests for the generated ngen realization files.
These tests snapshot that output for each model against a committed golden file.
Updating goldens (only when a change is intentional):
UPDATE_GOLDEN=1 uv run pytest tests/test_realization_templates.py
then eyeball the diff in ``tests/g... | CIROH-UA/NGIAB_data_preprocess | tests/test_realization_templates.py | .py | d0ec3079d7b40841 | 8.12 | 16 |
import warnings
import kornia.augmentation as Kaug
import torch
from omegaconf import OmegaConf
from benchmark.augmentations import custom_augmentations as Caug
warnings.simplefilter("once", UserWarning) # Set this at the script start
def get_augmentation(name, **kwargs):
"""Get the augmentation c... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | src/benchmark/augmentations/augmentations.py | .py | 87e3a13b081b7660 | 7.52 | 10 |
from typing import Optional
import kornia.augmentation as K
import numpy as np
import torch
RGB_FROM_HED = np.array([[0.65, 0.70, 0.29], [0.07, 0.99, 0.11], [0.27, 0.57, 0.78]], dtype=np.float32)
HED_FROM_RGB = np.linalg.inv(RGB_FROM_HED)
def torch_rgb2hed(img, hed_t, e):
"""Converts an RGB image to ... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | src/benchmark/augmentations/custom_augmentations.py | .py | 65a6466c976f8bab | 7.52 | 10 |
import pickle
import lmdb
from torch.utils.data import Dataset
class LMDBDataset(Dataset):
def __init__(self, path, include_sample_names=None, include_tile_names=None):
"""Initializes the LMDBDataset.
Args:
path (str): Path to the LMDB file.
include_sample_nam... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | src/benchmark/dataset/lmdb_dataset.py | .py | 604889a5682da841 | 7.52 | 10 |
import numpy as np
from benchmark.utils.utils import get_height_width, to_tuple
def center_pad_to_size(array, desired_shape):
"""
Center pad an array with zeros to reach the desired shape.
Args:
array (numpy.ndarray): The array to pad.
desired_shape (tuple of int): The desired shape afte... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | src/benchmark/dataset/split_to_tiles.py | .py | 66dc5b36f4ff2502 | 7.52 | 10 |
# adapted from CellViT
# https://github.com/TIO-IKIM/CellViT-plus-plus/blob/main/cellvit/models/cell_segmentation/cellvit.py
from collections import OrderedDict
import einops
import torch
import torch.nn as nn
from benchmark.models.simple_segmentation_model import (
clean_str,
load_model_and_transfo... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | src/benchmark/heads/unetr.py | .py | f31924a4c1d30d7f | 7.52 | 10 |
import os
import re
import numpy as np
import pandas as pd
import torch
from skimage.measure import regionprops_table
from tqdm import tqdm
from benchmark.utils.metric_utils import (
accuracy,
confusion_matrix_func,
f1_score_class,
precision,
recall,
)
from benchmark.utils.utils im... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | src/benchmark/run/eval.py | .py | c54b8b082fcdf1ca | 7.52 | 10 |
import os
import torch
import torch.distributed as dist
def init_distributed():
# Initializes the distributed backend which will take care of synchronizing nodes/GPUs
global RANK, WORLD_SIZE, LOCAL_RANK, LOCAL_WORLD_SIZE
# only works with torch.distributed.launch // torch.run
dist.init_proc... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | src/benchmark/utils/init_dist.py | .py | 5e0732be824a4117 | 7.52 | 10 |
import json
import os
from typing import Union
import h5py
import numpy as np
import pandas as pd
import torch
import torch.nn as nn
import torch.nn.functional as F
from torchvision.transforms import v2
from benchmark.dataset.lmdb_dataset import LMDBDataset
def get_height_width(array):
"""Get th... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | src/benchmark/utils/utils.py | .py | f55a92a17f068dc7 | 7.52 | 10 |
import os
import unittest
import numpy as np
from benchmark.dataset.lmdb_dataset import LMDBDataset
class TestLMDBDataset(unittest.TestCase):
"""Unit tests for the LMDBDataset class."""
def setUp(self):
"""Set up the test environment and dataset."""
# Path to the small LMDB dataset
... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | tests/test_lmdb_dataset.py | .py | 1581b1a87962b520 | 8.02 | 10 |
import os
import shutil
import tempfile
import unittest
import numpy as np
import scipy.io as sio
from bio_image_datasets.lizard_dataset import LizardDataset
from PIL import Image
from benchmark.dataset.split_to_tiles import center_pad_to_size, transform_to_tiles
class TestSplitToTiles(unittest.TestCase):
"""Te... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | tests/test_split_to_tiles.py | .py | 4c373ee21deb83af | 8.02 | 10 |
import os
import pickle
import shutil
import tempfile
import unittest
import lmdb
import numpy as np
import scipy.io as sio
# Import the necessary modules from your project
# Adjust the import paths as necessary
from bio_image_datasets.lizard_dataset import LizardDataset
from bio_image_datasets.segpath_dataset import... | Kainmueller-Lab/Pathology-Foundation-Model-Benchmark | tests/test_tiles_to_lmdb.py | .py | 14cc8675f8aa7ccd | 8.02 | 10 |
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
def cry_ads_energy(e_full_system, e_substrate, e_adsorbate):
"""
Calculate the adsorption energy of a system.
Args:
e_full_system (float): Total energy of the full system.
e_substrate (float): Energy of the substrate.
e_adsorbate (flo... | crystaldevs/CRYSTALClear | CRYSTALClear/calculate.py | .py | 44b0c021a8acb884 | 7.56 | 12 |
"""
Basic methods to manipulate pymatgen geometries
"""
def rotate_lattice(struc, rot):
"""
Geometries generated by ``base.crysout.GeomBASE`` might be rotated.
Rotate them back to make them consistent with geometries in output.
.. math::
\mathbf{L}_{crys} = \mathbf{L}_{pmg}\mathbf{R}
:math... | crystaldevs/CRYSTALClear | CRYSTALClear/geometry.py | .py | 59ba7aa2d1a71bbe | 7.56 | 12 |
import re
import fnmatch
import logging
from typing import List
import mayaUsd.lib as mayaUsdLib
from pxr import Sdf
def log_errors(fn):
"""Decorator to log errors on error"""
def wrap(*args, **kwargs):
try:
return fn(*args, **kwargs)
except Exception as exc:
logging... | ynput/ayon-maya | client/ayon_maya/api/chasers/export_filter_properties.py | .py | 20a7d0a8d7422a27 | 7.52 | 10 |
# -*- coding: utf-8 -*-
"""AYON script commands to be used directly in Maya."""
from maya import cmds
from ayon_api import get_project, get_folder_by_path
from ayon_core.pipeline import get_current_project_name, get_current_folder_path
class ToolWindows:
_windows = {}
@classmethod
def get_window(cls, ... | ynput/ayon-maya | client/ayon_maya/api/commands.py | .py | a8876b2cc0ac73b3 | 7.52 | 10 |
"""Host API required Work Files tool"""
import os
from maya import cmds
def file_extensions():
return [".ma", ".mb"]
def has_unsaved_changes():
return cmds.file(query=True, modified=True)
def save_file(filepath):
cmds.file(rename=filepath)
ext = os.path.splitext(filepath)[1]
if ext == ".mb":
... | ynput/ayon-maya | client/ayon_maya/api/workio.py | .py | 7212c283d3c6df56 | 7.52 | 10 |
from ayon_applications import PreLaunchHook, LaunchTypes
class MayaPreAutoLoadPlugins(PreLaunchHook):
"""Define -noAutoloadPlugins command flag.
Note: This also relies on `pre_open_workfile_post_initialization.py` to
ensure workfiles opening on launch open after initialization so we have
the right co... | ynput/ayon-maya | client/ayon_maya/hooks/pre_auto_load_plugins.py | .py | c533588d62263a8c | 7.52 | 10 |
from ayon_applications import PreLaunchHook, LaunchTypes
from ayon_maya.lib import create_workspace_mel
class PreCopyMel(PreLaunchHook):
"""Copy workspace.mel to workdir.
Hook `GlobalHostDataHook` must be executed before this hook.
"""
app_groups = {"maya", "mayapy"}
launch_types = {LaunchTypes.l... | ynput/ayon-maya | client/ayon_maya/hooks/pre_copy_mel.py | .py | 6cbc3a47d7c817a5 | 7.52 | 10 |
import os
from ayon_applications import PreLaunchHook, LaunchTypes
class MayaPreOpenWorkfilePostInitialization(PreLaunchHook):
"""Define whether open last workfile should run post initialize."""
# Before AddLastWorkfileToLaunchArgs.
order = 9
app_groups = {"maya"}
launch_types = {LaunchTypes.loc... | ynput/ayon-maya | client/ayon_maya/hooks/pre_open_workfile_post_initialization.py | .py | 0414e509ca096d0f | 7.52 | 10 |
from ayon_maya.api import (
lib,
plugin
)
from ayon_core.lib import BoolDef
class CreateCamera(plugin.MayaCreator):
"""Single baked camera"""
identifier = "io.openpype.creators.maya.camera"
label = "Camera"
product_base_type = "camera"
product_type = product_base_type
icon = "video-ca... | ynput/ayon-maya | client/ayon_maya/plugins/create/create_camera.py | .py | 63a38204d6a61c56 | 7.52 | 10 |
from ayon_maya.api import (
plugin,
lib
)
from ayon_core.lib import (
BoolDef,
TextDef
)
class CreateLook(plugin.MayaCreator):
"""Shader connections defining shape look"""
identifier = "io.openpype.creators.maya.look"
label = "Look"
product_base_type = "look"
product_type = produc... | ynput/ayon-maya | client/ayon_maya/plugins/create/create_look.py | .py | b454b91a25b3954f | 7.52 | 10 |
from ayon_maya.api import (
lib,
plugin
)
from ayon_core.lib import BoolDef
class CreateMatchmove(plugin.MayaCreator):
"""Instance for more complex setup of cameras.
Might contain multiple cameras, geometries etc.
It is expected to be extracted into .abc or .ma
"""
identifier = "io.open... | ynput/ayon-maya | client/ayon_maya/plugins/create/create_matchmove.py | .py | 748aa3560de1b9f1 | 7.52 | 10 |
from ayon_maya.api import plugin
from ayon_core.lib import EnumDef
class CreateMayaUsdLayer(plugin.MayaCreator):
"""Create Maya USD Export from `mayaUsdProxyShape` layer"""
identifier = "io.openpype.creators.maya.mayausdlayer"
label = "Maya USD Export Layer"
product_base_type = "usd"
product_type... | ynput/ayon-maya | client/ayon_maya/plugins/create/create_maya_usd_layer.py | .py | e5069c5e073ab1bd | 7.52 | 10 |
from ayon_maya.api import plugin
from ayon_core.lib import (
BoolDef,
TextDef
)
class CreateModel(plugin.MayaCreator):
"""Polygonal static geometry"""
identifier = "io.openpype.creators.maya.model"
label = "Model"
product_base_type = "model"
product_type = product_base_type
icon = "cu... | ynput/ayon-maya | client/ayon_maya/plugins/create/create_model.py | .py | c638770e62bca197 | 7.52 | 10 |
import collections
from ayon_api import (
get_folder_by_name,
get_folder_by_path,
get_folders,
get_tasks,
)
from maya import cmds # noqa: F401
from ayon_maya.api import plugin
from ayon_core.lib import EnumDef, TextDef
from ayon_core.pipeline import (
Creator,
get_current_folder_path,
get... | ynput/ayon-maya | client/ayon_maya/plugins/create/create_multishot_layout.py | .py | ae459232591969df | 7.52 | 10 |
import inspect
from ayon_maya.api import plugin
class CreateOxRig(plugin.MayaCreator):
"""Output for Ornatrix nodes"""
identifier = "io.ayon.creators.maya.oxrig"
label = "Ornatrix Rig"
product_base_type = "oxrig"
product_type = product_base_type
icon = "usb"
description = "Ornatrix Rig"
... | ynput/ayon-maya | client/ayon_maya/plugins/create/create_ornatrix_rig.py | .py | a36d40f9f5302295 | 7.52 | 10 |
# -*- coding: utf-8 -*-
"""Creator of Redshift proxy product types."""
from ayon_maya.api import plugin, lib
from ayon_core.lib import BoolDef
class CreateRedshiftProxy(plugin.MayaCreator):
"""Create instance of Redshift Proxy product."""
identifier = "io.openpype.creators.maya.redshiftproxy"
label = "R... | ynput/ayon-maya | client/ayon_maya/plugins/create/create_redshift_proxy.py | .py | bc5eb783971e7bbd | 7.52 | 10 |
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.session import AlbertSession
from albert.core.shared.enums import OrderBy
from albert.core.shared.identifiers import TaskId
from albert.resources.batch_data import BatchData, BatchDataType, BatchValuePatchPayload
c... | albert-labs/albert-python | src/albert/collections/batch_data.py | .py | d620056b8dca481b | 7.54 | 11 |
from collections.abc import Iterator
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.pagination import AlbertPaginator
from albert.core.session import AlbertSession
from albert.core.shared.enums import PaginationMode
from albert.core.shared.identifiers import BTD... | albert-labs/albert-python | src/albert/collections/btdataset.py | .py | c4b5e718954218ff | 7.54 | 11 |
from collections.abc import Iterator
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.pagination import AlbertPaginator
from albert.core.session import AlbertSession
from albert.core.shared.enums import OrderBy, PaginationMode
from albert.core.shared.identifiers i... | albert-labs/albert-python | src/albert/collections/btinsight.py | .py | 0fb5aac4338248cc | 7.54 | 11 |
import re
import warnings
from collections.abc import Iterator
from typing import Any
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.collections.lists import ListsCollection
from albert.core.pagination import AlbertPaginator
from albert.core.session import AlbertSess... | albert-labs/albert-python | src/albert/collections/cas.py | .py | 3397417db3ef3030 | 7.54 | 11 |
from __future__ import annotations
from collections.abc import AsyncIterator
from pydantic import validate_call
from albert.core.async_session import AsyncAlbertSession
from albert.core.pagination import AsyncAlbertPaginator
from albert.resources.chats import ChatFolder
class ChatFolderCollection:
"""Manage fo... | albert-labs/albert-python | src/albert/collections/chat_folders.py | .py | 477a1dda06e746ed | 7.54 | 11 |
from collections.abc import Iterator
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.logging import logger
from albert.core.pagination import AlbertPaginator, PaginationMode
from albert.core.session import AlbertSession
from albert.core.shared.identifiers import ... | albert-labs/albert-python | src/albert/collections/companies.py | .py | 8f09fd18fdc2f1b8 | 7.54 | 11 |
from collections.abc import Iterator
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.pagination import AlbertPaginator
from albert.core.session import AlbertSession
from albert.core.shared.enums import PaginationMode
from albert.core.shared.identifiers import Cus... | albert-labs/albert-python | src/albert/collections/custom_fields.py | .py | 9aaaa2672b534d44 | 7.54 | 11 |
import logging
from collections.abc import Iterator
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.pagination import AlbertPaginator
from albert.core.session import AlbertSession
from albert.core.shared.enums import OrderBy, PaginationMode
from albert.core.share... | albert-labs/albert-python | src/albert/collections/data_columns.py | .py | 789893460f19f0d2 | 7.54 | 11 |
from collections.abc import Iterator
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.pagination import AlbertPaginator, PaginationMode
from albert.core.session import AlbertSession
from albert.core.shared.enums import OrderBy
from albert.core.shared.identifiers i... | albert-labs/albert-python | src/albert/collections/entity_types.py | .py | a78905096551b4ff | 7.54 | 11 |
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.session import AlbertSession
from albert.resources.hazards import HazardStatement, HazardSymbol
class HazardsCollection(BaseCollection):
"""Fetch the platform's reference lists of GHS hazard symbols and stateme... | albert-labs/albert-python | src/albert/collections/hazards.py | .py | 6329adc4caa08472 | 7.54 | 11 |
from collections.abc import Iterator
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.pagination import AlbertPaginator
from albert.core.session import AlbertSession
from albert.core.shared.enums import PaginationMode
from albert.core.shared.identifiers import Lin... | albert-labs/albert-python | src/albert/collections/links.py | .py | 9239455fa2012e93 | 7.54 | 11 |
from collections.abc import Iterator
from albert.collections.base import BaseCollection
from albert.core.pagination import AlbertPaginator
from albert.core.session import AlbertSession
from albert.core.shared.enums import OrderBy, PaginationMode
from albert.resources.lists import ListItem, ListItemCategory
class Lis... | albert-labs/albert-python | src/albert/collections/lists.py | .py | f61ce1385aa4975d | 7.54 | 11 |
from collections.abc import Iterator
from albert.collections.base import BaseCollection
from albert.core.pagination import AlbertPaginator
from albert.core.session import AlbertSession
from albert.core.shared.enums import PaginationMode
from albert.core.utils import ensure_list
from albert.exceptions import BadRequest... | albert-labs/albert-python | src/albert/collections/locations.py | .py | ad7fe4d2b2fd48a1 | 7.54 | 11 |
from albert.collections.base import BaseCollection
from albert.core.session import AlbertSession
from albert.core.shared.enums import OrderBy
from albert.resources.notes import Note
class NotesCollection(BaseCollection):
"""Manage Notes in the Albert platform.
A Note is a free-text comment attached to anothe... | albert-labs/albert-python | src/albert/collections/notes.py | .py | f9194a64ef6e4790 | 7.54 | 11 |
import logging
from collections.abc import Iterator
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.pagination import AlbertPaginator
from albert.core.session import AlbertSession
from albert.core.shared.enums import OrderBy, PaginationMode
from albert.core.share... | albert-labs/albert-python | src/albert/collections/parameters.py | .py | 709faaa019e27f42 | 7.54 | 11 |
from typing import Any
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.session import AlbertSession
from albert.resources.pdf_generator import PDFOptions, PDFS3Storage, PDFTemplate
class PDFGeneratorCollection(BaseCollection):
"""Manage PDF, barcode, and QR... | albert-labs/albert-python | src/albert/collections/pdf_generator.py | .py | 944fd2cf637fd32d | 7.54 | 11 |
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.session import AlbertSession
from albert.core.shared.enums import OrderBy
from albert.core.shared.identifiers import InventoryId
from albert.core.shared.models.patch import PatchDatum, PatchOperation, PatchPayload
fr... | albert-labs/albert-python | src/albert/collections/pricings.py | .py | 1e9a6fcafde4c19c | 7.54 | 11 |
from typing import Literal
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.session import AlbertSession
from albert.core.shared.identifiers import InventoryId
from albert.resources.product_design import UnpackedProductDesign
class ProductDesignCollection(BaseCo... | albert-labs/albert-python | src/albert/collections/product_design.py | .py | da26c221ef2cb4c4 | 7.54 | 11 |
from albert.collections.base import BaseCollection
from albert.core.session import AlbertSession
from albert.resources.report_templates import (
ReportTemplate,
ReportTemplateCategory,
)
class ReportTemplateCollection(BaseCollection):
"""Manage Report Templates in the Albert platform.
A Report Templa... | albert-labs/albert-python | src/albert/collections/report_templates.py | .py | a9ec327dfefac4e7 | 7.54 | 11 |
import urllib
from albert.collections.base import BaseCollection
from albert.core.session import AlbertSession
from albert.resources.roles import Role
class RoleCollection(BaseCollection):
"""Manage Roles in the Albert platform.
A Role defines a set of access permissions (policies) within a tenant.
Role... | albert-labs/albert-python | src/albert/collections/roles.py | .py | f11801a4c108a6a5 | 7.54 | 11 |
from typing import Any
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.collections.inventory import InventoryCollection
from albert.collections.product_design import ProductDesignCollection
from albert.core.session import AlbertSession
from albert.exceptions import Al... | albert-labs/albert-python | src/albert/collections/sds.py | .py | b0ab470acd15c8cd | 7.54 | 11 |
from collections.abc import Iterator
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.pagination import AlbertPaginator
from albert.core.session import AlbertSession
from albert.core.shared.enums import PaginationMode
from albert.core.shared.identifiers import Pro... | albert-labs/albert-python | src/albert/collections/smart_datasets.py | .py | 4e298f4363c1b88d | 7.54 | 11 |
from pydantic import validate_call
from albert.collections.base import BaseCollection
from albert.core.session import AlbertSession
from albert.resources.storage_classes import StorageClass
class StorageClassesCollection(BaseCollection):
"""Access hazardous-materials Storage Classes in the Albert platform.
... | albert-labs/albert-python | src/albert/collections/storage_classes.py | .py | ab719954c2c375bf | 7.54 | 11 |
import logging
from collections.abc import Iterator
from albert.collections.base import BaseCollection
from albert.core.logging import logger
from albert.core.pagination import AlbertPaginator, MappedPaginator
from albert.core.session import AlbertSession
from albert.core.shared.enums import PaginationMode
from albert... | albert-labs/albert-python | src/albert/collections/storage_locations.py | .py | d86001abcdc0f670 | 7.54 | 11 |
import json
from albert.collections.base import BaseCollection
from albert.core.session import AlbertSession
from albert.resources.substance import SubstanceInfo, SubstanceResponse
class SubstanceCollection(BaseCollection):
"""Look up regulatory and hazard information for chemical substances.
A Substance is... | albert-labs/albert-python | src/albert/collections/substance.py | .py | 785652a8380a9edf | 7.54 | 11 |
"""
Application Context for Dependency Injection.
Manages all application-wide controllers and services.
"""
from __future__ import annotations
from dataclasses import dataclass, field
from typing import TYPE_CHECKING, Optional
if TYPE_CHECKING:
from src.lock.lock import GPIOController
from src.messaging.ema... | morzan1001/Kiosk | src/app_context.py | .py | fcd69e23b08ae0dc | 7.42 | 6 |
"""Database connection helpers.
The application initializes the database once at startup and then provides
SQLAlchemy sessions via a singleton `SessionManager`.
To keep side effects contained, the module stores runtime state in a single
state object instead of multiple module-level globals.
"""
from dataclasses impo... | morzan1001/Kiosk | src/database/connection.py | .py | 911201b7cb9277ed | 7.42 | 6 |
"""Shared CRUD mixin used by SQLAlchemy models."""
from typing import List, Optional, Type, TypeVar
T = TypeVar("T", bound="CRUDMixin")
class CRUDMixin:
"""Mixin that adds convenience methods for CRUD (Create, Read, Update, Delete) operations."""
def create(self, session, commit=True):
"""Adds this... | morzan1001/Kiosk | src/database/crud_mixin.py | .py | c1d0bd918bd5f6f5 | 7.42 | 6 |
"""This file holds the item model."""
from typing import Optional
from sqlalchemy import Column, Float, Integer, LargeBinary, String
from src.database.connection import Base
from src.database.crud_mixin import CRUDMixin
# Define the Item model
class Item(Base, CRUDMixin):
__tablename__ = "items"
__table_ar... | morzan1001/Kiosk | src/database/models/item.py | .py | fa05a1b5371cfe4f | 7.42 | 6 |
"""Translation loading and access helpers.
This module loads the locale-specific JSON file into a global cache via
initialize_translations() and exposes it via get_translations().
"""
import json
import locale
from dataclasses import dataclass
from typing import Optional
from src.logmgr import logger
from src.utils.... | morzan1001/Kiosk | src/localization/translator.py | .py | 69172893581c7217 | 7.42 | 6 |
"""
GPIO Manager Module.
Provides initialization and access functions for the GPIOController.
"""
from typing import Optional
from src.app_context import get_app_context
from src.lock.lock import GPIOController
from src.logmgr import logger
def initialize_gpio(chip: str = "/dev/gpiochip0", line_number: int = 4) -> ... | morzan1001/Kiosk | src/lock/gpio_manager.py | .py | 84db7149b871fbc8 | 7.42 | 6 |
"""
GPIO Controller Module.
Provides hardware control for the kiosk lock mechanism.
"""
from typing import Optional
import gpiod
from gpiod.line import Direction, Value
class GPIOController:
"""
Controller for GPIO-based lock mechanism.
Attributes:
chip: The GPIO chip device path.
line_... | morzan1001/Kiosk | src/lock/lock.py | .py | 547e0a0ff53ffd81 | 7.42 | 6 |
"""Logging utilities.
This project historically used a small wrapper (`LogMgr`) around Python's
`logging` module to simplify usage and automatically rotate log files monthly.
The wrapper is kept for backwards compatibility, but its public methods now
accept the standard logging API shape (`msg, *args, **kwargs`) so c... | morzan1001/Kiosk | src/logmgr/logmgr.py | .py | 02a0e807f54b0da8 | 7.42 | 6 |
"""
Main module for the Kiosk application.
Initializes the application, database, and UI.
"""
import os
import sys
from time import sleep
from typing import Optional
import customtkinter
from customtkinter import CTk, set_appearance_mode
sys.path.append(os.path.abspath(os.path.join(os.path.dirname(__file__), "..")))... | morzan1001/Kiosk | src/main.py | .py | 2b7250b4b162351a | 7.42 | 6 |
"""
Base Messaging Controller Module.
Provides an abstract base class for all messaging channels.
"""
import queue
import threading
from abc import ABC, abstractmethod
from typing import Any, Dict, Optional, Union
from src.localization.translator import get_translations
from src.logmgr import logger
class BaseMessa... | morzan1001/Kiosk | src/messaging/base_messaging_controller.py | .py | db73c4cc76e19226 | 7.42 | 6 |
"""Email messaging controller implementation."""
import os
import smtplib
from datetime import datetime
from email.mime.image import MIMEImage
from email.mime.multipart import MIMEMultipart
from email.mime.text import MIMEText
from jinja2 import Environment, FileSystemLoader, TemplateError
from src.localization.tran... | morzan1001/Kiosk | src/messaging/email/email_controller.py | .py | 6f31a0680d472391 | 7.42 | 6 |
"""
Email Manager Module.
Provides initialization and access functions for the EmailController.
"""
from typing import Any, Dict, Optional
from src.app_context import get_app_context
from src.database.connection import get_new_session
from src.database.models.user import User
from src.localization.translator import g... | morzan1001/Kiosk | src/messaging/email/email_manager.py | .py | e5112d7fc3656dfc | 7.42 | 6 |
"""Mattermost messaging controller implementation."""
import requests
from src.localization.translator import get_translations
from src.logmgr import logger
from src.messaging.base_messaging_controller import BaseMessagingController
class MattermostController(BaseMessagingController):
"""Controller for Mattermo... | morzan1001/Kiosk | src/messaging/mattermost/mattermost_controller.py | .py | 3727739acc34f7c2 | 7.42 | 6 |
"""
Mattermost Manager Module.
Provides initialization and access functions for the MattermostController.
"""
from typing import Any, Dict, Optional
from src.app_context import get_app_context
from src.database.connection import get_db
from src.database.models.user import User
from src.localization.translator import ... | morzan1001/Kiosk | src/messaging/mattermost/mattermost_manager.py | .py | a8c633fb47981776 | 7.42 | 6 |
"""
Utility functions for messaging modules.
"""
from datetime import datetime, timedelta
from apscheduler.schedulers.background import BackgroundScheduler
from apscheduler.triggers.cron import CronTrigger
from src.database.models.item import Item
from src.database.models.transaction import Transaction
from src.logm... | morzan1001/Kiosk | src/messaging/utils.py | .py | d02de180fe01d57d | 7.42 | 6 |
"""
NFC Reader Module.
Provides continuous NFC card reading in a separate thread.
"""
import threading
import time
from typing import Callable, List, Optional
from py532lib.i2c import Pn532_i2c
from py532lib.mifare import Mifare
from src.logmgr import logger
pn532: Pn532_i2c = Pn532_i2c()
pn532.SAMconfigure()
mifar... | morzan1001/Kiosk | src/nfc_reader/nfc_reader.py | .py | 26f60a5b3010f2ee | 7.42 | 6 |
"""
Sound Controller Module.
Manages audio playback for positive and negative feedback sounds.
"""
import os
import queue
import secrets
import threading
from typing import List, Literal, Optional
import numpy as np
import sounddevice as sd
import soundfile as sf
from numpy.typing import NDArray
from scipy import sig... | morzan1001/Kiosk | src/sounds/sound_controller.py | .py | 90b65b2d7042347a | 7.42 | 6 |
"""
Sound Manager Module.
Provides initialization and access functions for the SoundController.
"""
from typing import Optional
from src.app_context import get_app_context
from src.logmgr import logger
from src.sounds.sound_controller import SoundController
def initialize_sound_controller(pos_dir: str, neg_dir: str... | morzan1001/Kiosk | src/sounds/sound_manager.py | .py | 0d736b6397ed9d62 | 7.42 | 6 |
"""Transient message overlay component."""
import os
from customtkinter import CTkFrame, CTkImage, CTkLabel
from PIL import Image
from src.logmgr import logger
from src.utils.paths import get_image_path
class ShowMessage(CTkFrame):
"""Simple message frame with icon, heading and text."""
def __init__(self,... | morzan1001/Kiosk | src/ui/components/Message.py | .py | 0b46325443ac2880 | 7.42 | 6 |
"""Admin dashboard card component."""
import tkinter as tk
from typing import Optional
from customtkinter import CTkFrame, CTkImage, CTkLabel
from PIL import Image
from src.logmgr import logger
from src.utils.paths import get_image_path
class DashboardCardFrame(CTkFrame):
"""
A unified card for the admin d... | morzan1001/Kiosk | src/ui/components/dashboard_card_frame.py | .py | ebd151b9c755b7a5 | 7.42 | 6 |
"""Reusable screen heading with back (and optional delete) action."""
from customtkinter import CTkButton, CTkFrame, CTkImage, CTkLabel
from PIL import Image
from src.logmgr import logger
from src.utils.paths import get_image_path
class HeadingFrame(CTkFrame):
"""Heading bar used across screens."""
def __i... | morzan1001/Kiosk | src/ui/components/heading_frame.py | .py | 42753842fccc8924 | 7.42 | 6 |
from io import BytesIO
from typing import Optional
from customtkinter import CTkFrame, CTkImage, CTkLabel
from PIL import Image
class InfoCardFrame(CTkFrame):
"""
A generic frame for displaying an image (left) and two lines of text (right).
Used for Items and Users in lists.
"""
def __init__(
... | morzan1001/Kiosk | src/ui/components/info_card_frame.py | .py | 4ebe47c943f020fd | 7.42 | 6 |
import os
from io import BytesIO
from typing import Optional
from customtkinter import (
CTkButton,
CTkEntry,
CTkFrame,
CTkImage,
CTkLabel,
CTkOptionMenu,
filedialog,
)
from PIL import Image, UnidentifiedImageError
from src.localization.translator import get_translations
from src.logmgr im... | morzan1001/Kiosk | src/ui/components/item_form.py | .py | 254b1a70f7a63215 | 7.42 | 6 |
"""Quantity selector component used in the user cart."""
import tkinter as tk
from customtkinter import CTkButton, CTkEntry, CTkFrame, CTkImage
from PIL import Image
from src.utils.paths import get_image_path
class QuantityFrame(CTkFrame):
def __init__(self, master, data, update_total_price, item_price: float,... | morzan1001/Kiosk | src/ui/components/quantity_frame.py | .py | 5c68caee6603416e | 7.42 | 6 |
"""NFC scan prompt component."""
from customtkinter import CTkButton, CTkFrame, CTkImage, CTkLabel
from PIL import Image
from src.localization.translator import get_translations
from src.logmgr import logger
from src.nfc_reader import NFCReader
from src.ui.components.heading_frame import HeadingFrame
from src.utils.p... | morzan1001/Kiosk | src/ui/components/scan_card.py | .py | b58e60b01d13fe64 | 7.42 | 6 |
"""Admin dashboard screen.
Shows high-level counters (users/items) and provides navigation into admin flows.
"""
from customtkinter import CTkFrame, CTkImage, CTkLabel
from PIL import Image
from src.database import Item, User, get_db
from src.localization.translator import get_translations
from src.logmgr import log... | morzan1001/Kiosk | src/ui/screens/admin_main.py | .py | 6f1bcbca618463f9 | 7.42 | 6 |
"""Item listing screen.
Provides a scrollable list of items for admin flows.
"""
import time
from typing import List
from customtkinter import CTkButton, CTkFrame, CTkScrollableFrame
from src.database import Item, get_db
from src.localization.translator import get_translations
from src.logmgr import logger
from src... | morzan1001/Kiosk | src/ui/screens/item_listing.py | .py | 1f79205ca1f34e2b | 7.42 | 6 |
"""
Sim3PluckerData — static .pkl files (pre-generated offline)
Expected .pkl layout:
<data_dir>/<dataset>_train/
matches.pkl list of (2, n_inliers) int32 arrays
plucker1.pkl list of (n_lines, 6) float32 arrays
plucker2.pkl list of (n_lines, 6) float32 arrays
R_gt.p... | rueyday/ScalePluckerNet | lib/dataloader.py | .py | 7d558c80cbf5dfc3 | 7.45 | 7 |
from typing import Any
from typing import Awaitable
from typing import Callable
from aiogram import BaseMiddleware
from aiogram.types import TelegramObject
from src.db.dal import DataAccessLayer
class DataAccessLayerMiddleware(BaseMiddleware):
"""
Access to DAL from handlers
"""
def __init__(self, ... | bralbral/telegram-stream-notifier | src/bot/middlewares/dal.py | .py | 2df8c18f90317650 | 7.52 | 10 |
from typing import Any
from typing import Awaitable
from typing import Callable
from typing import Optional
from aiocache import Cache
from aiogram.dispatcher.middlewares.base import BaseMiddleware
from aiogram.types import Message
from src.db import DataAccessLayer
from src.db.models import UserModel
from src.db.mod... | bralbral/telegram-stream-notifier | src/bot/middlewares/role.py | .py | f26ce8576579b51a | 7.52 | 10 |
"""Sphinx configuration for the bbg-fetch documentation."""
import os
project = "bbg-fetch"
author = "Artur Sepp"
copyright = "2026, Artur Sepp"
version = "3.1"
release = "3.1.0"
extensions = [
"sphinx.ext.autodoc",
]
root_doc = "index"
source_suffix = ".rst"
exclude_patterns = ["_build"]
html_theme = "alabast... | ArturSepp/BloombergFetch | docs/conf.py | .py | 149f37bfc5776b9f | 7.65 | 19 |
"""BLOOMBERG TERMINAL REQUIRED: fetch a trailing dividend yield."""
from enum import Enum
from bbg_fetch import fetch_div_yields
class Locals(Enum):
"""Available dividend-history example workflows."""
DIVIDEND_YIELD = 1
def run_local(local: Locals) -> None:
"""Fetch and print the trailing dividend yi... | ArturSepp/BloombergFetch | examples/fetch_div_history.py | .py | 90dad66733687b5b | 7.65 | 19 |
"""BLOOMBERG TERMINAL REQUIRED: fetch an option chain and recover its forward.
Run on the Bloomberg machine. bbg_fetch.option_chain.run() does the work — fetch the
chain, infer spot and the year fraction from it, recover the parity forward and rate —
and returns an OptionChainResult. Pass a currently listed expiry on ... | ArturSepp/BloombergFetch | examples/fetch_option_chain.py | .py | 54d92aba4784acf4 | 7.65 | 19 |
"""NO TERMINAL: verify installation with a deterministic public-API workflow."""
import platform
from enum import Enum
from importlib.metadata import version
import numpy as np
import pandas as pd
import bbg_fetch
SPOT = 100.0
FORWARD = 102.0
RATE = 0.03
YEAR_FRACTION = 0.25
class Locals(Enum):
"""Available ... | ArturSepp/BloombergFetch | examples/quickstart_no_terminal.py | .py | cafb08fdebaf6742 | 7.65 | 19 |
"""
Test: cash-adjusted PX_LAST vs TOT_RETURN_INDEX_GROSS_DVDS for dividend-heavy equities.
Validates that fetch_field_timeseries_per_tickers with CshAdjNormal=True, CshAdjAbnormal=True
produces return series economically equivalent to the Bloomberg total return index.
Expected behavior:
- Daily return correlation ... | ArturSepp/BloombergFetch | src/bbg_fetch/tests/bbg_adj_price_vs_tri_test.py | .py | 03d16e63d444f273 | 8.15 | 19 |
"""
every axis=1 ``pd.concat`` in library code states ``sort=`` explicitly.
``pd.concat(objs, axis=1)`` joins the frames on their index, and whether the resulting union is
sorted has been changing under us. pandas 2.2 sorted the union of DatetimeIndexes whatever
``sort=`` said; pandas 3.0 honours an explicit ``sort=Fa... | ArturSepp/BloombergFetch | tests/test_concat_sort_convention.py | .py | 85c2916f13013a3e | 8.15 | 19 |
"""Repository checks for the Sphinx documentation foundation."""
import re
import runpy
import textwrap
from pathlib import Path
from types import SimpleNamespace
from xml.etree import ElementTree
import bbg_fetch
REPOSITORY_ROOT = Path(__file__).resolve().parents[1]
DOCS_ROOT = REPOSITORY_ROOT / "docs"
CANONICAL_D... | ArturSepp/BloombergFetch | tests/test_docs_surface.py | .py | feb9b9016d7074a2 | 8.15 | 19 |
"""Repository-owned package identity and release-metadata checks."""
from pathlib import Path
REPOSITORY_ROOT = Path(__file__).resolve().parents[1]
CANONICAL_DESCRIPTION = (
"Bloomberg Desktop API request/response data in pandas DataFrames for quantitative research"
)
DOCUMENTATION_URL = "https://bloombergfetch.... | ArturSepp/BloombergFetch | tests/test_identity_metadata.py | .py | c977774dd9885c64 | 8.15 | 19 |
"""Contracts separating pytest modules, development runners, and examples."""
from __future__ import annotations
import ast
from pathlib import Path
REPOSITORY_ROOT = Path(__file__).resolve().parents[1]
PACKAGE_ROOT = REPOSITORY_ROOT / "src" / "bbg_fetch"
TESTS_ROOT = REPOSITORY_ROOT / "tests"
EXAMPLES_ROOT = REPOSI... | ArturSepp/BloombergFetch | tests/test_module_layout.py | .py | ef39c2b098298bec | 8.15 | 19 |
"""Repository-only packaging layout checks."""
from pathlib import Path
REPOSITORY_ROOT = Path(__file__).resolve().parents[1]
def test_import_package_uses_src_layout() -> None:
"""Keep the import package isolated from the repository root."""
package_root = REPOSITORY_ROOT / "src" / "bbg_fetch"
assert ... | ArturSepp/BloombergFetch | tests/test_repository_layout.py | .py | 0119ce93ff990fce | 8.15 | 19 |
"""
Script to remove company history entries that are not present in the company list files
"""
import json
import sys
from src.companies import Companies
from src.logging_utils import get_logger
logger = get_logger(__name__)
def cleanup_history(history_file: str, company_list: list, label: str) -> tuple[int, int]:... | crypto-jobs-fyi/crawler | cleanup_history_all.py | .py | e2c9fe27a28f06d0 | 7.48 | 8 |
"""
Script to remove job links from jobs age files that are not in the jobs.json files
"""
import json
import sys
import re
from src.logging_utils import get_logger
logger = get_logger(__name__)
def extract_url_from_html_link(html_link: str) -> str:
"""Extract URL from HTML link tag like <a href='url'>text</a>"... | crypto-jobs-fyi/crawler | cleanup_jobs_age.py | .py | 74dec37cec7e354e | 7.48 | 8 |
import json
from src.companies import Companies
from src.logging_utils import get_logger
# Filter companies specifically for the AI category
company_list = Companies.filter_companies(category="ai")
Companies.write_companies('ai_companies.json', company_list)
logger = get_logger(__name__)
# Main output file for AI job... | crypto-jobs-fyi/crawler | merge_ai_jobs.py | .py | e8530ca8480db29d | 7.48 | 8 |
import json
from src.companies import Companies
from src.logging_utils import get_logger
# Filter companies specifically for the Crypto category
company_list = Companies.filter_companies(category="crypto")
Companies.write_companies('crypto_companies.json', company_list)
logger = get_logger(__name__)
# Main output fil... | crypto-jobs-fyi/crawler | merge_crypto_jobs.py | .py | 96e46743b626a8ff | 7.48 | 8 |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.