dataset stringclasses 45
values | id stringlengths 17 64 | messages listlengths 2 2 |
|---|---|---|
science.medmentions_ner | science.medmentions_ner.1862 | [
{
"role": "user",
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"HealthCareActivity\", \"InjuryOrPoisoning\", \"BodySubstance\", \"IntellectualProduct\", \"AnatomicalStructure\", \"Spatia... |
science.scientific_papers_summarization_single_doc_pubmed | science.scientific_papers_summarization_single_doc_pubmed.26868 | [
{
"role": "user",
"content": "You will be presented with the full text of a biomedical research paper. Please write an abstract for this paper. Your response should include the abstract and no additional text.\n\nPaper text:\na fragment corresponding to the extracellular domain ( 20160 amino acids ) of huma... |
science.scientific_lay_summarisation_plos_single_doc_summ | science.scientific_lay_summarisation_plos_single_doc_summ.22677 | [
{
"role": "user",
"content": "You will be presented with the abstract, introduction, and discussion section from a biomedical research article. Your task is to create a summary that a layperson can understand, capturing the essence of the research article. Keep essential scientific terms, but ensure that th... |
science.qasa_abstractive_qa | science.qasa_abstractive_qa.1505 | [
{
"role": "user",
"content": "You will be shown an excerpt from a computer science scientific research paper, followed by a question about the paper. Please answer the question. Do not include any text in your response other than the answer.\n\nContext: Diffusion models are probabilistic generative models t... |
science.data_reco_mcq_mc | science.data_reco_mcq_mc.2365 | [
{
"role": "user",
"content": "You are provided with a research question, keyphrases about the question, a description of candidate datasets and dataset options. Read the description of popular datasets provided below and select the ones that can be used to validate the following research question. Use your ... |
science.chemprot_re | science.chemprot_re.188 | [
{
"role": "user",
"content": "Given an abstract from a research paper, your task is to identify and label relationships between chemical compounds and genes mentioned in the abstract.\n\nThe relationship type must be one of ['DOWNREGULATOR', 'SUBSTRATE', 'INDIRECT-REGULATOR', 'PART-OF', 'MODULATOR-ACTIVATOR... |
science.covid_deepset_qa | science.covid_deepset_qa.604 | [
{
"role": "user",
"content": "You will be shown a paragraph from a biomedical research paper, followed by a question about the paper. Please extract text from the paragraph to answer the question. Do not include any text in your repsonse other than the answer.\n\nParagraph: Etiology of Influenza-Like Illnes... |
science.scientific_papers_summarization_single_doc_arxiv | science.scientific_papers_summarization_single_doc_arxiv.95294 | [
{
"role": "user",
"content": "You will be presented with the full text of a science research paper. Please write an abstract for this paper. Your response should include the abstract and no additional text.\n\nPaper text:\nthe bhlumi monte carlo ( mc ) program@xcite was developed as a precision tool for cal... |
science.mslr2022_ms2_multidoc_summarization | science.mslr2022_ms2_multidoc_summarization.6735 | [
{
"role": "user",
"content": "You will be presented with a collection of medical randomized controlled trial (RCT) reports addressing a shared clinical question -- for instance, the efficacy of a medical intervention on a disease or condition. Given the titles and abstracts of these reports, your task is to... |
science.multixscience_multidoc_summarization | science.multixscience_multidoc_summarization.6025 | [
{
"role": "user",
"content": "You are provided with the abstract of a scientific paper and the abstracts of the papers it references. Your task is to write a Related Work section for the main paper. This section should concisely summarize and integrate the key points from the cited abstracts, reflecting how... |
science.multixscience_multidoc_summarization | science.multixscience_multidoc_summarization.7184 | [
{
"role": "user",
"content": "You are provided with the abstract of a scientific paper and the abstracts of the papers it references. Your task is to write a Related Work section for the main paper. This section should concisely summarize and integrate the key points from the cited abstracts, reflecting how... |
science.bioasq_factoid_qa | science.bioasq_factoid_qa.1138 | [
{
"role": "user",
"content": "You will be shown biomedical passages and your task is to the answer the provided question. Provide a concise and accurate response and do not include any additional text in the response other than the answer.\n\nQuestion: What is a bacteriocin?\n\nContext: One such strategy in... |
science.scitldr_aic | science.scitldr_aic.876 | [
{
"role": "user",
"content": "Below are the abstract, introduction, and conclusion of a computer science research paper. Please summarize the main contribution of the work in a single sentence. Your response should include the summary and no additional text.\n\nPaper text:\n\nPrevious work shows that advers... |
science.bc7_litcovid_topic_classification | science.bc7_litcovid_topic_classification.3470 | [
{
"role": "user",
"content": "You are presented with a paragraph from a COVID-19 literature. Classify the topics of this piece of text by choosing from the following categories:\n\n- Epidemic Forecasting: The content relates to predictions about the spread of COVID-19.\n- Treatment: The paragraph discusses ... |
science.anat_em_ner | science.anat_em_ner.86 | [
{
"role": "user",
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"AnatomicalEntity\"].\n\nPlease return the output as a JSON object of the format: {\"AnatomicalEntity\": [\"tumor cells\", ... |
science.scitldr_aic | science.scitldr_aic.317 | [
{
"role": "user",
"content": "Below are the abstract, introduction, and conclusion of a computer science research paper. Please summarize the main contribution of the work in a single sentence. Your response should include the summary and no additional text.\n\nPaper text:\n\nDeep neural networks work well ... |
science.craftchem_ner | science.craftchem_ner.3644 | [
{
"role": "user",
"content": "You will be presented a sentence from biomedical research text. Extract all terms that correspond to chemical entities of biological interest (ChEBI).\nReturn your identified terms in a JSON array, formatted like this: [\"Entity1\", \"Entity2\", ...].\nIf no such entities are d... |
science.chemprot_re | science.chemprot_re.147 | [
{
"role": "user",
"content": "Given an abstract from a research paper, your task is to identify and label relationships between chemical compounds and genes mentioned in the abstract.\n\nThe relationship type must be one of ['DOWNREGULATOR', 'SUBSTRATE', 'INDIRECT-REGULATOR', 'PART-OF', 'MODULATOR-ACTIVATOR... |
science.bioasq_factoid_qa | science.bioasq_factoid_qa.401 | [
{
"role": "user",
"content": "You will be shown biomedical passages and your task is to the answer the provided question. Provide a concise and accurate response and do not include any additional text in the response other than the answer.\n\nQuestion: What is the function of the spliceosome complex?\n\nCon... |
science.chia_ner | science.chia_ner.148 | [
{
"role": "user",
"content": "You will be shown inclusion or exclusion criteria for a clinical trial. Given these criteria, your task is to extract all unique entities of the following types: [\"Observation\", \"Condition\", \"Procedure\", \"Drug\", \"Temporal\", \"Multiplier\", \"Qualifier\", \"Negation\",... |
science.healthver_entailment | science.healthver_entailment.1659 | [
{
"role": "user",
"content": "You will be shown a claim about public health, and the abstract of a biomedical research paper. Each sentence from the abstract will be on a separate line. Your task is to return a JSON object with two fields:\n\n- \"verdict\": The fact-checking verdict. If the information in t... |
science.healthver_entailment | science.healthver_entailment.4783 | [
{
"role": "user",
"content": "You will be shown a claim about public health, and the abstract of a biomedical research paper. Each sentence from the abstract will be on a separate line. Your task is to return a JSON object with two fields:\n\n- \"verdict\": The fact-checking verdict. If the information in t... |
science.chemprot_ner | science.chemprot_ner.505 | [
{
"role": "user",
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"Protein\", \"Chemical\"].\n\nPlease return the output as a JSON object of the format: {\"Chemical\" : [\"Dexamethasone\", ... |
science.multixscience_multidoc_summarization | science.multixscience_multidoc_summarization.27096 | [
{
"role": "user",
"content": "You are provided with the abstract of a scientific paper and the abstracts of the papers it references. Your task is to write a Related Work section for the main paper. This section should concisely summarize and integrate the key points from the cited abstracts, reflecting how... |
science.mslr2022_cochrane_multidoc_summarization | science.mslr2022_cochrane_multidoc_summarization.2151 | [
{
"role": "user",
"content": "You will be provided with the titles and abstracts of a collection of medical RCT reports studying a clinical question -- for instance, the efficacy of an intervention on some medical outcome. Please write a few sentences synthesizing the findings of these reports, which could ... |
science.scientific_papers_summarization_single_doc_pubmed | science.scientific_papers_summarization_single_doc_pubmed.48256 | [
{
"role": "user",
"content": "You will be presented with the full text of a biomedical research paper. Please write an abstract for this paper. Your response should include the abstract and no additional text.\n\nPaper text:\nthis investigation was part of a trial evaluating a(h1n1)pdm09 transmission among ... |
science.medmentions_ner | science.medmentions_ner.507 | [
{
"role": "user",
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"HealthCareActivity\", \"InjuryOrPoisoning\", \"BodySubstance\", \"IntellectualProduct\", \"AnatomicalStructure\", \"Spatia... |
science.chia_ner | science.chia_ner.111 | [
{
"role": "user",
"content": "You will be shown inclusion or exclusion criteria for a clinical trial. Given these criteria, your task is to extract all unique entities of the following types: [\"Observation\", \"Condition\", \"Procedure\", \"Drug\", \"Temporal\", \"Multiplier\", \"Qualifier\", \"Negation\",... |
science.chemsum_single_document_summarization | science.chemsum_single_document_summarization.103175 | [
{
"role": "user",
"content": "You will be shown the title of a chemistry paper, together with sections excerpted from the body of the paper. The paper sections may include HTML tags like `<p>` and `</p>`; please ignore these. Your task is to write an abstract for the paper. Your response should include the ... |
science.chemprot_re | science.chemprot_re.244 | [
{
"role": "user",
"content": "Given an abstract from a research paper, your task is to identify and label relationships between chemical compounds and genes mentioned in the abstract.\n\nThe relationship type must be one of ['DOWNREGULATOR', 'SUBSTRATE', 'INDIRECT-REGULATOR', 'PART-OF', 'MODULATOR-ACTIVATOR... |
science.scireviewgen_multidoc_summarization | science.scireviewgen_multidoc_summarization.13546 | [
{
"role": "user",
"content": "You are presented with multiple paper abstracts, alongside the associated literature review and chapter titles. Given the provided information, you are going to do a literature review. Please generate a coherent literature review that synthesizes the content, draws connections ... |
science.craftchem_ner | science.craftchem_ner.9734 | [
{
"role": "user",
"content": "You will be presented a sentence from biomedical research text. Extract all terms that correspond to chemical entities of biological interest (ChEBI).\nReturn your identified terms in a JSON array, formatted like this: [\"Entity1\", \"Entity2\", ...].\nIf no such entities are d... |
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