metadata
dataset_info:
- config_name: train
features:
- name: pdb_name
dtype: string
- name: processed_path
dtype: string
- name: oligomeric_count
dtype: string
- name: oligomeric_detail
dtype: string
- name: resolution
dtype: float64
- name: structure_method
dtype: string
- name: num_chains
dtype: int64
- name: quaternary_category
dtype: string
- name: seq_len
dtype: int64
- name: modeled_seq_len
dtype: int64
- name: coil_percent
dtype: float64
- name: helix_percent
dtype: float64
- name: strand_percent
dtype: float64
- name: radius_gyration
dtype: float64
- name: struct_seq
dtype: string
- name: aa_seq
dtype: string
- name: lddt_ca
dtype: float64
- name: rmsd
dtype: float64
- name: cluster
dtype: string
- name: gvp_feat_path
dtype: string
- name: split
dtype: string
- name: domain_num
dtype: float64
- name: domain_split
dtype: string
- name: avg_plddt
dtype: float64
- name: plddt
sequence: float64
- name: plddt_std
dtype: float64
- name: length
dtype: int64
splits:
- name: train
num_bytes: 987161580
num_examples: 220354
download_size: 435599159
dataset_size: 987161580
- config_name: valid
features:
- name: pdb_name
dtype: string
- name: processed_path
dtype: string
- name: oligomeric_count
dtype: 'null'
- name: oligomeric_detail
dtype: 'null'
- name: resolution
dtype: float64
- name: structure_method
dtype: 'null'
- name: num_chains
dtype: int64
- name: quaternary_category
dtype: string
- name: seq_len
dtype: int64
- name: modeled_seq_len
dtype: int64
- name: coil_percent
dtype: float64
- name: helix_percent
dtype: float64
- name: strand_percent
dtype: float64
- name: radius_gyration
dtype: float64
- name: struct_seq
dtype: string
- name: aa_seq
dtype: string
- name: lddt_ca
dtype: float64
- name: rmsd
dtype: float64
- name: cluster
dtype: float64
- name: gvp_feat_path
dtype: 'null'
- name: split
dtype: string
- name: domain_num
dtype: float64
- name: domain_split
dtype: 'null'
- name: avg_plddt
dtype: float64
- name: plddt
dtype: 'null'
- name: length
dtype: int64
splits:
- name: train
num_bytes: 184672
num_examples: 128
download_size: 150842
dataset_size: 184672
configs:
- config_name: train
data_files:
- split: train
path: train/train-*
- config_name: valid
data_files:
- split: train
path: valid/train-*
task_categories:
- feature-extraction
library_name: byprot
license: mit
This dataset contains preprocessed protein structure and sequence data used for training and evaluating multimodal protein language models. It is based on experimental structures from PDB and AF2-predicted structures from SwissProt, as described in the paper Elucidating the Design Space of Multimodal Protein Language Models.
Project page: https://bytedance.github.io/dplm/dplm-2.1