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from module_base import ModuleBase from module_mixins import NoConfigModuleMixin import module_utils import vtk IMAGE_DATA = 0 POLY_DATA = 1 class StreamerVTK(NoConfigModuleMixin, ModuleBase): def __init__(self, module_manager): ModuleBase.__init__(self, module_manager) self._image_data_streamer ...
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk class RegionGrowing(ScriptedConfigModuleMixin, ModuleBase): def __init__(self, module_manager): ...
Python
import gen_utils from module_base import ModuleBase from module_mixins import NoConfigModuleMixin import module_utils import vtk class polyDataNormals(NoConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # initialise our base class ModuleBase.__init__(self, module_manager) ...
Python
import gen_utils from module_base import ModuleBase from module_mixins import NoConfigModuleMixin import module_utils import vtk import vtkdevide class greyReconstruct(NoConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # initialise our base class ModuleBase.__init__(self, module_...
Python
import gen_utils from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk class opening(ScriptedConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # initialise our base class ModuleBase.__init__(self, module_manager) ...
Python
import operator from module_base import ModuleBase from module_mixins import IntrospectModuleMixin import module_utils import vtk import vtkdevide import wx from module_mixins import ColourDialogMixin class shellSplatSimple(IntrospectModuleMixin, ColourDialogMixin, ModuleBase): def __init_...
Python
# todo: # * vtkVolumeMapper::SetCroppingRegionPlanes(xmin,xmax,ymin,ymax,zmin,zmax) from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk import vtkdevide import vtktudoss class ExpVolumeRender( ScriptedConfigModuleMixin, ModuleBase): def __init...
Python
import gen_utils from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import wx import vtk class closing(ScriptedConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # initialise our base class ModuleBase.__init__(self, mod...
Python
from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk class marchingCubes(ScriptedConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # call parent constructor ModuleBase.__init__(self, module_manager) self....
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. from module_base import ModuleBase from module_mixins import NoConfigModuleMixin import module_utils import vtk import numpy class FitEllipsoidToMask(NoConfigModuleMixin, ModuleBase): def __init__(self, module_manager): ...
Python
# dumy __init__ so this directory can function as a package
Python
# dumy __init__ so this directory can function as a package
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk class ICPTransform(ScriptedConfigModuleMixin, ModuleBase): def __init__(self, module_manager): ...
Python
import gen_utils from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk class seedConnect(ScriptedConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # call parent constructor ModuleBase.__init__(self, module_manager)...
Python
from module_base import ModuleBase from module_mixins import vtkPipelineConfigModuleMixin import module_utils import vtk class contourFLTBase(ModuleBase, vtkPipelineConfigModuleMixin): def __init__(self, module_manager, contourFilterText): # call parent constructor ModuleBase.__init__(self, modul...
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk import input_array_choice_mixin # need this for constants reload(input_array_choice_mixin) from input_array_...
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk import input_array_choice_mixin reload(input_array_choice_mixin) from input_array_choice_mixin import InputA...
Python
import gen_utils from module_base import ModuleBase from module_mixins import NoConfigModuleMixin import module_utils import vtk class clipPolyData(NoConfigModuleMixin, ModuleBase): """Given an input polydata and an implicitFunction, this will clip the polydata. All points that are inside the implicit fun...
Python
# landmark_transform.py copyright (c) 2003 by Charl P. Botha <cpbotha@ieee.org> # $Id$ # see module documentation import gen_utils from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk class landmarkTransform(ScriptedConfigModuleMixin, ModuleBase): ...
Python
import gen_utils from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk OPS = ['add', 'subtract', 'multiply', 'divide', 'invert', 'sin', 'cos', 'exp', 'log', 'abs', 'sqr', 'sqrt', 'min', 'max', 'atan', 'atan2', 'multiply by k', 'add c', 'conj...
Python
from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk import vtkdevide class selectConnectedComponents(ScriptedConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # call parent constructor ModuleBase.__init__(self, mo...
Python
# dumy __init__ so this directory can function as a package
Python
# TODO: simplify module!! all this muck was necessary due to the old # demand-driven model. Keep the code around, it could be used as # illustrative case. import gen_utils from module_base import ModuleBase from module_mixins import NoConfigModuleMixin import module_utils import vtk import vtkdevide class modifyHom...
Python
import gen_utils from module_base import ModuleBase from module_mixins import NoConfigModuleMixin import module_utils import wx import vtk class imageGradientMagnitude(NoConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # initialise our base class ModuleBase.__init__(self, module...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk class ImageLogic(ScriptedConfigModuleMixin, ModuleBase): # get these values from vtkImageMathematic...
Python
from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk class contour(ScriptedConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # call parent constructor ModuleBase.__init__(self, module_manager) self._conto...
Python
# Modified by FrancoisMalan 2011-12-06 so that it can handle an input with larger # extent than its source. Changes constitute the padder module and pad_source method import gen_utils from module_base import ModuleBase from module_mixins import NoConfigModuleMixin import module_utils import vtk class prob...
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. from module_base import ModuleBase from module_mixins import IntrospectModuleMixin import module_kits.vtk_kit import module_utils import vtk import wx from module_kits.misc_kit.devide_types import MedicalMetaData class EditM...
Python
# decimateFLT.py copyright (c) 2003 by Charl P. Botha http://cpbotha.net/ # $Id$ # module that triangulates and decimates polygonal input import gen_utils from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk import gen_utils from module_base import Modul...
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. import vtk DEFAULT_SELECTION_STRING = 'Default active array' class InputArrayChoiceMixin: def __init__(self): self._config.vectorsSelection = DEFAULT_SELECTION_STRING self._config.input_array_names = [] ...
Python
# glenoidMouldDesigner.py copyright 2003 Charl P. Botha http://cpbotha.net/ # $Id$ # devide module that designs glenoid moulds by making use of insertion # axis and model of scapula # this module doesn't satisfy the event handling requirements of DeVIDE yet # if you call update on the output PolyData, this module won'...
Python
from module_base import ModuleBase from module_mixins import NoConfigModuleMixin import module_utils import vtk class transformImageToTarget(NoConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # initialise our base class ModuleBase.__init__(self, module_manager) ...
Python
import gen_utils from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk class imageMedian3D(ScriptedConfigModuleMixin, ModuleBase): def __init__(self, module_manager): # initialise our base class ModuleBase.__init__(self, module_m...
Python
from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk import vtkdevide class imageFillHoles(ScriptedConfigModuleMixin, ModuleBase): def __init__(self, module_manager): ModuleBase.__init__(self, module_manager) self._imageBorderMask =...
Python
from module_base import ModuleBase from module_mixins import IntrospectModuleMixin import module_utils import vtk import vtkdevide import wx class histogramSegment(IntrospectModuleMixin, ModuleBase): """Mooooo! I'm a cow. $Revision: 1.9 $ """ _gridCols = [('Type', 0), ('Number of Handles',0)] _g...
Python
from module_kits.misc_kit.mixins import SubjectMixin import geometry from module_base import ModuleBase from module_mixins import IntrospectModuleMixin import module_utils import Measure2DFrame reload(Measure2DFrame) import vtk import vtktudoss import wx class M2DMeasurementInfo: pass class M2DWidget: """Cla...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. from external.ObjectListView import ColumnDefn, EVT_CELL_EDIT_FINISHING import itk from module_kits import itk_kit import module_utils import vtk import wx ####################################################################...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. class CodeRunner: kits = ['wx_kit', 'vtk_kit'] cats = ['Viewers'] help = \ """CodeRunner facilitates the direct integration of Python code into a DeVIDE network. The top part contains three editor int...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. import comedi_utils reload(comedi_utils) import vtk import vtktudoss from module_kits import vtk_kit import wx ########################################################################### # 2D: # * Checkerboard. # * differe...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. # Hello there person reading this source! # At the moment, I'm trying to get a fully-functioning DICOM browser # out the door as fast as possible. As soon as the first version is # out there and my one user can start giving ...
Python
# - make our own window control for colour-sequence bar # - this should also have separate (?) line with HSV colour vertices # - on this line, there should be vertical lines indicating the current # position of all the opacity transfer function vertices # - abstract floatcanvas-derived linear function editor into wx_...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. import cStringIO import vtk from vtk.wx.wxVTKRenderWindowInteractor import wxVTKRenderWindowInteractor import wx # wxPython 2.8.8.1 wx.aui bugs severely on GTK. See: # http://trac.wxwidgets.org/ticket/9716 # Until this is fi...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. from module_kits.vtk_kit.utils import DVOrientationWidget import operator import vtk import wx class SyncSliceViewers: """Class to link a number of CMSliceViewer instances w.r.t. camera. FIXME: consider adding o...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. # skeleton of an AUI-based viewer module # copy and modify for your own purposes. # set to False for 3D viewer, True for 2D image viewer IMAGE_VIEWER = True # import the frame, i.e. the wx window containing everything impor...
Python
import vtk import wx from vtk.wx.wxVTKRenderWindowInteractor import wxVTKRenderWindowInteractor import external.PyAUI as PyAUI from resources.python import measure2d_panels reload(measure2d_panels) class Measure2DFrame(wx.Frame): def __init__(self, parent, id=-1, title="", pos=wx.DefaultPosition, ...
Python
from external import wxPyPlot import gen_utils from module_base import ModuleBase from module_mixins import IntrospectModuleMixin import module_utils try: import Numeric except: import numarray as Numeric import vtk import wx class histogram1D(IntrospectModuleMixin, ModuleBase): """Calculates and sh...
Python
# slice3d_vwr.py copyright (c) 2002-2010 Charl P. Botha # next-generation of the slicing and dicing devide module # TODO: 'refresh' handlers in set_input() # TODO: front-end / back-end module split (someday) # should we use background renderer for gradient background, or # built-in VTK functionality? BACKGROUND_RENDE...
Python
# dumy __init__ so this directory can function as a package
Python
# dumy __init__ so this directory can function as a package
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. # skeleton of an AUI-based viewer module # copy and modify for your own purposes. # set to False for 3D viewer, True for 2D image viewer IMAGE_VIEWER = True MATCH_MODE_PASSTHROUGH = 0 MATCH_MODE_LANDMARK_SS = 1 MATCH_MODE_...
Python
# check python24/lib/code.py - exceptions raised only result in # printouts. perhaps we want a real exception? import code # deep magic import md5 from module_base import ModuleBase from module_mixins import IntrospectModuleMixin, WindowRenameMixin import module_utils import sys import module_kits.wx_kit from module_...
Python
# implicits.py copyright (c) 2003 Charl P. Botha <cpbotha@ieee.org> # $Id$ import gen_utils from modules.viewers.slice3dVWRmodules.shared import s3dcGridMixin import vtk import wx # ------------------------------------------------------------------------- class implicitInfo: def __init__(self): self.name...
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. import operator import module_utils import vtk import wx class sliceDirection: """Class encapsulating all logic behind a single direction. This class contains the IPWs and related paraphernalia for all layers (pr...
Python
# tdObjects.py copyright (c) 2003 by Charl P. Botha <cpbotha@ieee.org> # $Id$ # class that controls the 3-D objects list import gen_utils reload(gen_utils) import math import module_kits from module_kits.vtk_kit import misc from modules.viewers.slice3dVWRmodules.shared import s3dcGridMixin import operator import vtk i...
Python
# shared.py copyright (c) 2003 Charl P. Botha <cpbotha@ieee.org> # $Id$ # import wx class s3dcGridMixin(object): """ """ def _handlerGridRangeSelect(self, event): """This event handler is a fix for the fact that the row selection in the wxGrid is deliberately broken. It's also ...
Python
# selectedPoints.py copyright (c) 2003 Charl P. Botha <cpbotha@ieee.org> # $Id$ # from module_kits.misc_kit.mixins import SubjectMixin from modules.viewers.slice3dVWRmodules.shared import s3dcGridMixin import operator import vtk import wx # ------------------------------------------------------------------------- c...
Python
# sliceDirections.py copyright (c) 2003 Charl P. Botha <cpbotha@ieee.org> # $Id$ # class encapsulating all instances of the sliceDirection class import gen_utils # the following two lines are only needed during prototyping of the modules # that they import import modules.viewers.slice3dVWRmodules.sliceDirection reloa...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. import cStringIO from vtk.wx.wxVTKRenderWindowInteractor import wxVTKRenderWindowInteractor import wx # wxPython 2.8.8.1 wx.aui bugs severely on GTK. See: # http://trac.wxwidgets.org/ticket/9716 # Until this is fixed, use th...
Python
#Hacked out of from a class contained in Charl Botha's comedi_utils.py #Incorporated edits by by Corine Slagboom & Noeska Smit which formed part of their comedi_utils used as part of their Emphysema Viewer. #Final version by Francois Malan (2010-2011) from module_kits.vtk_kit.utils import DVOrientationWidget impo...
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. # NOTES: # you can't put the RWI in a StaticBox, it never manages to appear. # mode: add / subtract # tool: new region growing, level set (with existing mask), draw # closed polygon, delete # ARGH. region growing results in...
Python
# dumy __init__ so this directory can function as a package
Python
# Modified by Francois Malan, LUMC / TU Delft # Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. from vtk.wx.wxVTKRenderWindowInteractor import wxVTKRenderWindowInteractor import wx import wx.lib.inspection import vtk # wxPython 2.8.8.1 wx.aui bugs severely on GTK. See: # ht...
Python
# $Id$ from module_base import ModuleBase from module_mixins import ScriptedConfigModuleMixin import module_utils import vtk import vtkdevide class histogram2D(ScriptedConfigModuleMixin, ModuleBase): """This module takes two inputs and creates a 2D histogram with input 2 vs input 1, i.e. input 1 on x-axis and...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. import csv import geometry import glob import os import math from module_base import ModuleBase from module_mixins import IntrospectModuleMixin,\ FileOpenDialogModuleMixin import module_utils import vtk import vtkgdcm...
Python
from wxPython._controls import wxLIST_MASK_STATE from wxPython._controls import wxLIST_STATE_SELECTED import os.path # Modified by Francois Malan, LUMC / TU Delft # December 2009 # # based on the SkeletonAUIViewer: # skeleton of an AUI-based viewer module # Copyright (c) Charl P. Botha, TU Delft. # set to False for 3D...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. import cStringIO from vtk.wx.wxVTKRenderWindowInteractor import wxVTKRenderWindowInteractor import wx # wxPython 2.8.8.1 wx.aui bugs severely on GTK. See: # http://trac.wxwidgets.org/ticket/9716 # Until this is fixed, use th...
Python
from module_base import ModuleBase from module_mixins import IntrospectModuleMixin import module_utils import operator HTML_START = '<html><body>' HTML_END = '</body></html>' def render_actions(lines): ms = '<p><b><ul>%s</ul></b></p>' # this should yield: <li>thing 1\n<li>thing 2\n<li>thing 3 etc bullets ...
Python
# __init__.py by Charl P. Botha <cpbotha@ieee.org> # $Id$ # used to be module list, now dummy file
Python
# dumy __init__ so this directory can function as a package
Python
#!/usr/bin/env python # Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. import re import getopt import mutex import os import re import stat import string import sys import time import traceback import ConfigParser # we need to import this explicitly, else...
Python
# snippet to save polydata of all selected objects to disc, transformed with # the currently active object motion for that object. This snippet should be # run within a slice3dVWR introspection context. # $Id$ import os import tempfile import vtk className = obj.__class__.__name__ if className == 'slice3dVWR': ...
Python
# short DeVIDE matplotlib demo. from pylab import * # close previous figure if it exists try: obj.mpl_close_figure(numpy_test_figure) except NameError: pass numpy_test_figure = obj.mpl_new_figure() # this example from http://matplotlib.sourceforge.net/screenshots/log_shot.py dt = 0.01 t = arange(dt, 20.0, d...
Python
# EXPERIMENTAL. DO NOT USE UNLESS YOU ARE JORIK. (OR JORIS) import vtk className = obj.__class__.__name__ if className == 'slice3dVWR': ipw = obj.sliceDirections._sliceDirectionsDict.values()[0]._ipws[0] if ipw.GetInput(): mins, maxs = ipw.GetInput().GetScalarRange() else: mins, maxs...
Python
# this snippet will rotate the camera in the slice3dVWR that you have # selected whilst slowly increasing the isovalue of the marchingCubes that # you have selected and dump every frame as a PNG to the temporary directory # this is ideal for making movies of propagating surfaces in distance fields # 1. right click on ...
Python
import vtk import wx className = obj.__class__.__name__ if className == 'slice3dVWR': sds = obj.sliceDirections.getSelectedSliceDirections() if len(sds) > 0: opacityText = wx.GetTextFromUser( 'Enter a new opacity value (0.0 to 1.0) for all selected ' 'slices.') o...
Python
# snippet to be ran in the introspection window of a slice3dVWR to # export the whole scene as a RIB file. Before you can do this, # both BACKGROUND_RENDERER and GRADIENT_BACKGROUND in slice3dVWR.py # should be set to False. obj._orientation_widget.Off() rw = obj._threedRenderer.GetRenderWindow() re = vtk.vtkRIBExp...
Python
# short DeVIDE matplotlib demo. from pylab import * # close previous figure if it exists try: obj.mpl_close_figure(numpy_test_figure) except NameError: pass numpy_test_figure = obj.mpl_new_figure() a = arange(-30, 30, 0.01) plot(a, sin(a) / a, label='sinc(x)') plot(a, cos(a), label='cos(x)') legend() grid()...
Python
# link cameras of all selected slice3dVWRs # after having run this, all selected slice3dVWRs will have linked # cameras, so if you change the view in anyone, all will follow. # 1. run this in the main DeVIDE introspection window after having # selected a number of slice3dVWRs # 2. to unlink views, type unlink_slic...
Python
# to use this code: # 1. load into slice3dVWR introspection window # 2. execute with ctrl-enter or File | Run current edit # 3. in the bottom window type lm1 = get_lookmark() # 4. do stuff # 5. to restore lookmark, do set_lookmark(lm1) # keep on bugging me to: # 1. fix slice3dVWR # 2. build this sort of functionality ...
Python
# $Id$ # to use a shader on an actor, do this first before export: # a = vtk.vtkRIBProperty() # a.SetVariable('Km', 'float') # a.SetParameter('Km', '1') # a.SetDisplacementShader('dented') # actor.SetProperty(a) import os import tempfile import vtk className = obj.__class__.__name__ if className == 'slice3dVWR': ...
Python
# snippet to change the LookupTables (colourmaps) of the selected objects # this should be run in the introspection context of a slice3dVWR # $Id$ import os import tempfile import vtk className = obj.__class__.__name__ if className == 'slice3dVWR': # find all polydata objects so = obj._tdObjects._getSelecte...
Python
# convert old-style (up to DeVIDE 8.5) to new-style DVN network files # # usage: # load your old network in DeVIDE 8.5, then execute this snippet in # the main Python introspection window. To open the main Python # introspection window, select from the main DeVIDE menu: "Window | # Python Shell". In the window ...
Python
# this is an extremely simple example of a DeVIDE snippet # Open the Python shell (under Window in the Main Window), click on the # "Load Snippet" button and select this file. # it will print the directory where devide is installed and then show # the main application help print devideApp.get_appdir() devideApp.showH...
Python
# this DeVIDE snippet will determine the surface area of all selected # 3D objects in a marked slice3dVWR # in short: # 1. right click on a slice3dVWR in the graphEditor # 2. select "Mark Module" from the drop-down menu # 3. accept "slice3dVWR" as suggestion for the mark index name # 4. execute this snippet import vt...
Python
# $Id$ import os import tempfile import vtk className = obj.__class__.__name__ if className == 'slice3dVWR': rw = obj._threedRenderer.GetRenderWindow() try: e = vtk.vtkGL2PSExporter() except AttributeError: print "Your VTK was compiled without GL2PS support." else: e.S...
Python
import vtk className = obj.__class__.__name__ if className == 'slice3dVWR': rw = obj.threedFrame.threedRWI.GetRenderWindow() rw.SetStereoTypeToCrystalEyes() #rw.SetStereoTypeToRedBlue() rw.SetStereoRender(1) rw.Render() else: print "This snippet must be run from a slice3dVWR introspection win...
Python
# short DeVIDE matplotlib demo. from pylab import * # close previous figure if it exists try: obj.mpl_close_figure(numpy_test_figure) except NameError: pass # square figure and square axes looks better for polar plots numpy_test_figure = obj.mpl_new_figure(figsize=(8,8)) ax = axes([0.1, 0.1, 0.8, 0.8], polar...
Python
# snippet that illustrates programmatic setting of Window/Level # in the slice3dVWR introspection interface W = 500 L = 1000 sds = obj.sliceDirections._sliceDirectionsDict.values() for sd in sds: ipw = sd._ipws[0] ipw.SetWindowLevel(W, L, 0)
Python
# this snippet will rotate the camera in the slice3dVWR that you have # selected and dump every frame as a PNG to the temporary directory # you can modify this snippet if you want to make movies of for instance # deforming surfaces and whatnot # 1. right click on a slice3dVWR in the graphEditor # 2. select "Mark Modul...
Python
import vtk import wx def makeBorderPD(ipw): # setup source ps = vtk.vtkPlaneSource() ps.SetOrigin(ipw.GetOrigin()) ps.SetPoint1(ipw.GetPoint1()) ps.SetPoint2(ipw.GetPoint2()) fe = vtk.vtkFeatureEdges() fe.SetInput(ps.GetOutput()) tubef = vtk.vtkTubeFilter() tubef.SetNumberOfSides...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. import ConfigParser from ConfigParser import NoOptionError import copy from module_kits.misc_kit.mixins import SubjectMixin from module_manager import PickledModuleState, PickledConnection import os import time import types ...
Python
# python rules. severely. # (c) 2007 cpbotha import glob import sys import os import shutil import zipfile def main(): cwd = os.path.abspath(os.curdir) hhp_dir = os.path.join(cwd, 'devidehelp_tmphhp') os.chdir(hhp_dir) htb_list = glob.glob('*.html') + \ glob.glob('*.png') + \ glob....
Python
# example driver script for offline / command-line processing with DeVIDE # the following variables are magically set in this script: # interface - instance of ScriptInterface, with the following calls: # meta_modules = load_and_realise_network() # execute_network(self, meta_modules) # clear_network(self) # in...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. import counter class MetaModule: """Class used to store module-related information. Every instance is contained in a single MetaModule. This is why the cycle-proof module split has not been implemented as Meta...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. """ """ import mutex ######################################################################### class SchedulerException(Exception): pass class CyclesDetectedException(SchedulerException): pass ################...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. """Module containing base class for devide modules. author: Charl P. Botha <cpbotha@ieee.org> """ ######################################################################### class GenericObject(object): """Generic object ...
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. # importing this module shouldn't directly cause other large imports # do large imports in the init() hook so that you can call back to the # ModuleManager progress handler methods. """geometry_kit package driver file. Inser...
Python
import math import numpy epsilon = 1e-12 def abs(v1): return numpy.absolute(v1) def norm(v1): """Given vector v1, return its norm. """ v1a = numpy.array(v1) norm = numpy.sqrt(numpy.sum(v1a * v1a)) return norm def normalise_line(p1, p2): """Given two points, return normal vector, magnitu...
Python
# Copyright (c) Charl P. Botha, TU Delft # All rights reserved. # See COPYRIGHT for details. import wx def get_system_font_size(): # wx.SYS_ANSI_FIXED_FONT seems to return reliable settings under # Windows and Linux. SYS_SYSTEM_FONT doesn't do so well on Win. ft = wx.SystemSettings.GetFont(wx.SYS_ANSI_FI...
Python
# Copyright (c) Charl P. Botha, TU Delft. # All rights reserved. # See COPYRIGHT for details. import os import sys import module_kits.wx_kit from module_kits.wx_kit.python_shell_mixin import PythonShellMixin import wx class Tab: def __init__(self, editwindow, interp): self.editwindow = editwindow ...
Python