code stringlengths 1 1.96M | language stringclasses 1
value |
|---|---|
#!/bin/sh
# rough
export PATH=$PATH:$JAVA_HOME/bin
base=`dirname $0`
export ALLOCATION_JAR=$base/lib/allocation.jar
exec java -cp $base/lib/caliper-@VERSION@.jar:$ALLOCATION_JAR:$CLASSPATH com.google.caliper.Runner $*
| Shell |
#!/bin/bash
cd bin/
javah -jni org.androhid.NativeBtHid
| Shell |
#!/bin/bash
cd bin/
javah -jni org.androhid.NativeBtHid
| Shell |
#!/bin/sh
# Start GUI Vim on a copy of the tutor file.
# Usage: gvimtutor [xx]
# See vimtutor for usage.
exec `dirname $0`/vimtutor -g "$@"
| Shell |
#! /bin/sh
# Start Vim on a copy of the tutor file.
# Usage: vimtutor [-g] [xx]
# Where optional argument -g starts vimtutor in gvim (GUI) instead of vim.
# and xx is a language code like "es" or "nl".
# When an argument is given, it tries loading that tutor.
# When this fails or no argument was given, it tries using... | Shell |
#! /bin/sh
# installman.sh --- install or uninstall manpages for Vim
#
# arguments:
# 1 what: "install", "uninstall" or "xxd"
# 2 target directory e.g., "/usr/local/man/it/man1"
# 3 language addition e.g., "" or "-it"
# 4 vim location as used in manual pages e.g., "/usr/local/share/vim"
# 5 runtime dir ... | Shell |
#! /bin/sh
#
# which.sh -- find where an executable is located. It's here because the
# "which" command is not supported everywhere. Used by Makefile.
IFS=":"
for ac_dir in $PATH; do
if test -f "$ac_dir/$1"; then
echo "$ac_dir/$1"
break
fi
done
| Shell |
#! /bin/sh
#
# link.sh -- try linking Vim with different sets of libraries, finding the
# minimal set for fastest startup. The problem is that configure adds a few
# libraries when they exist, but this doesn't mean they are needed for Vim.
#
# Author: Bram Moolenaar
# Last change: 2010 Nov 03
# License: Publi... | Shell |
#! /bin/sh
#
# osdef.sh -- copy osdef.h.in to osdef.h while removing declarations
# found in the system header files. Caution: weird sed magic going on here.
# Warnings are printed if sed did not survive.
#
# (C) Michael Schroeder, Juergen Weigert
#
# osdef.h.in has been split into osdef1.h.in and osdef2.h.in, because ... | Shell |
#! /bin/sh
# mkinstalldirs --- make directory hierarchy
# Author: Noah Friedman <friedman@prep.ai.mit.edu>
# Created: 1993-05-16
# Public domain
errstatus=0
for file
do
set fnord `echo ":$file" | sed -ne 's/^:\//#/;s/^://;s/\// /g;s/^#/\//;p'`
shift
pathcomp=
for d
do
pathcomp="$pathcomp$d"
... | Shell |
#! /bin/sh
#
# pathdef.sh: adjust pathdef.c for auto/link.sed, if it exists
#
if test -s auto/link.sed; then
cp auto/pathdef.c auto/pathdef.tmp
sed -f auto/link.sed <auto/pathdef.tmp >auto/pathdef.c
rm -f auto/pathdef.tmp
fi
# vim:set sw=2 et:
| Shell |
#!/bin/sh
# toolcheck -- check for tools that have severe bugs. Good that all the buggy
# tools identify by version numbers. This is the spirit of GNU :-)
#
# 24.7.95 jw.
retval=0
reply="`sh -version -c exit 2>&1 < /dev/null`"
case "$reply" in
GNU*1.14.3*)
echo "- sh is '$reply'";
echo " CAUTION: This she... | Shell |
#! /bin/sh
# installml.sh --- install or uninstall manpage links for Vim
#
# arguments:
# 1 what: "install" or "uninstall"
# 2 also do GUI pages: "yes" or ""
# 3 target directory e.g., "/usr/local/man/it/man1"
# 4 vim exe name e.g., "vim"
# 5 vimdiff exe name e.g., "vimdiff"
# 6 evim exe name ... | Shell |
#!/bin/sh
#
# ref - Check spelling of the arguments
#
# Usage: ref word ..
#
# can be used for the K command of Vim
#
spell <<EOF
$*
EOF
| Shell |
#!/bin/sh
# enable DEC locator input model on remote terminal
printf "\033[1;2'z\033[1;3'{\c"
vim "$@"
# disable DEC locator input model on remote terminal
printf "\033[2;4'{\033[0'z\c"
| Shell |
#!/bin/sh
# Shell script to start Vim with less.vim.
# Read stdin if no arguments were given and stdin was redirected.
if test -t 1; then
if test $# = 0; then
if test -t 0; then
echo "Missing filename" 1>&2
exit
fi
vim --cmd 'let no_plugin_maps = 1' -c 'runtime! macros/less.vim' -
else
... | Shell |
#! /bin/sh
prefix=stock_
list=
for file in "$@"
do
name=`echo "$file" | sed 's|-|_|g; s|^.*/||; s|\..*$||'`
list="$list $prefix$name $file"
done
gdk-pixbuf-csource --raw --static --build-list $list
| Shell |
#! /bin/bash
# Binary of the Texturepacker:
TEXTUREPACKER_BINARY=/usr/local/bin/TexturePacker
# Shared Spritesheet-Output-Definitions:
SPRITESHEET_OUTPUT_DIRECTORY="../assets/gfx/spritesheets/"
SPRITESHEET_OUTPUT_JAVAIDS_PACKAGE="org.anddev.andengine.examples.spritesheets"
SPRITESHEET_OUTPUT_JAVAIDS_DIRECTORY="../src... | Shell |
#!/bin/sh
#
# Detects OS we're compiling on and outputs a file specified by the first
# argument, which in turn gets read while processing Makefile.
#
# The output will set the following variables:
# CC C Compiler path
# CXX C++ Compiler path
# PLATFORM_LDFLAGS ... | Shell |
#!/bin/bash
# Adjust these to reflect the location of NUnit in your system,
# and how you want NUnit to run
NUNIT=~/protobuf/NUnit-2.5.0.9122/bin/net-2.0/nunit-console.exe
NUNIT_OPTIONS=-noshadow
# The rest should be okay.
SRC=../src
LIB=../lib
KEYFILE=../keys/Google.ProtocolBuffers.snk
rm -rf bin
mkdir bin
# Runn... | Shell |
#!/bin/bash
echo Compiling protobufs
rm -rf tmp
mkdir tmp
PROTOS_DIR=../protos
./protoc --proto_path=$PROTOS_DIR --descriptor_set_out=tmp/compiled.pb \
$PROTOS_DIR/google/protobuf/descriptor.proto \
$PROTOS_DIR/google/protobuf/csharp_options.proto \
$PROTOS_DIR/google/protobuf/unittest.proto \
$PROTOS_DIR/goo... | Shell |
#!/bin/bash
set -e
# Check if the jar has been built.
if [ ! -e target/bitcoinj-tools-*.jar ] || [[ "$ALWAYS_BUILD_WALLETTOOL" != "" ]]; then
echo "Compiling WalletTool to a JAR"
cd ../core
mvn install -DskipTests
cd ../tools
[ -e target/bitcoinj-tools-*.jar ] && rm target/bitcoinj-tools-*.jar
mvn package... | Shell |
#!/bin/bash
# Copyright 2010 Google Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed t... | Shell |
#! /bin/bash
# Binary of the Texturepacker:
TEXTUREPACKER_BINARY=/usr/local/bin/TexturePacker
# Shared Spritesheet-Output-Definitions:
SPRITESHEET_OUTPUT_DIRECTORY="../assets/gfx/spritesheets/"
SPRITESHEET_OUTPUT_JAVAIDS_PACKAGE="org.anddev.andengine.examples.spritesheets"
SPRITESHEET_OUTPUT_JAVAIDS_DIRECTORY="../src... | Shell |
#! /bin/bash
# Binary of the Texturepacker:
TEXTUREPACKER_BINARY=/usr/local/bin/TexturePacker
# Shared Spritesheet-Output-Definitions:
SPRITESHEET_OUTPUT_DIRECTORY="../assets/gfx/spritesheets/"
SPRITESHEET_OUTPUT_JAVAIDS_PACKAGE="org.website.project.spritesheets"
SPRITESHEET_OUTPUT_JAVAIDS_DIRECTORY="../src/org/websi... | Shell |
#
# This file is part of JGrasstools (http://www.jgrasstools.org)
# (C) HydroloGIS - www.hydrologis.com
#
# JGrasstools is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License,... | Shell |
#!/bin/bash
#
# Starts a basic web server on the port specified.
#
# ./serve.sh 3000 -> http://localhost:3000
#
# Copyright 2012 Eric Bidelman <ebidel@gmail.com>
port=$1
if [ $# -ne 1 ]
then
port=8000
fi
open http://localhost:$port/template.html && python -m SimpleHTTPServer $port;
| Shell |
#!/bin/sh
find . -name "*~" -type f | xargs rm -f
find . -name ".#*" -type f | xargs rm -f
find . -name "*.rej" -type f | xargs rm -f
find . -name "*.orig" -type f | xargs rm -f
find . -name "DEADJOE" -type f | xargs rm -f
find . -type f | grep -v ".psp" | grep -v ".gif" | grep -v ".jpg" | grep -v ".png" | grep -v ".t... | Shell |
#!/bin/sh
find . -name "*~" -type f | xargs rm -f
find . -name ".#*" -type f | xargs rm -f
find . -name "*.rej" -type f | xargs rm -f
find . -name "*.orig" -type f | xargs rm -f
find . -name "DEADJOE" -type f | xargs rm -f
find . -type f | grep -v ".psp" | grep -v ".gif" | grep -v ".jpg" | grep -v ".png" | grep -v ".t... | Shell |
#!/bin/sh
/usr/bin/lynx -source http://example.com/cron.php > /dev/null 2>&1
| Shell |
#!/bin/sh
curl --silent --compressed http://example.com/cron.php
| Shell |
#!/bin/sh
curl --silent --compressed http://example.com/cron.php
| Shell |
<?php
/**
* @file
* This script runs Drupal tests from command line.
*/
define('SIMPLETEST_SCRIPT_COLOR_PASS', 32); // Green.
define('SIMPLETEST_SCRIPT_COLOR_FAIL', 31); // Red.
define('SIMPLETEST_SCRIPT_COLOR_EXCEPTION', 33); // Brown.
// Set defaults and get overrides.
list($args, $count) = simpletest_script_par... | Shell |
#!/bin/sh
/usr/bin/lynx -source http://example.com/cron.php > /dev/null 2>&1
| Shell |
#!/bin/sh
#
# Copyright (c) 2012-2014 Andrea Selva
#
echo " "
echo " ___ ___ _ _ ___ ________ _____ _____ "
echo " | \/ | | | | | | \/ | _ |_ _|_ _| "
echo " | . . | ___ ... | Shell |
#!/bin/sh -x
PROJECT="gmail-delay-send"
USER="blairkutz@gmail.com"
ENV=dev
FILE_NAME="output/${PROJECT}.${ENV}"
echo "Combining and uploading files for $ENV"
rm -f ${FILE_NAME}
touch ${FILE_NAME}
for FILE in ../src/*
do
cat $FILE >> ${FILE_NAME}
done
python utils/googlecode_upload.py -s "Uploading for $ENV" -p ... | Shell |
#!/bin/sh
VERSION=BETA_0.7.3
git tag -f ${VERSION}
mkdir -f output
FILE_NAME=output/${VERSION}.combined
for FILE in ../src/downloaded/*
do
cat $FILE >> ${FILE_NAME}
done
| Shell |
#!/bin/sh
# START-COMMIT HOOK
#
# The start-commit hook is invoked before a Subversion txn is created
# in the process of doing a commit. Subversion runs this hook
# by invoking a program (script, executable, binary, etc.) named
# 'start-commit' (for which this file is a template)
# with the following ordered... | Shell |
#!/bin/sh
# POST-REVPROP-CHANGE HOOK
#
# The post-revprop-change hook is invoked after a revision property
# has been added, modified or deleted. Subversion runs this hook by
# invoking a program (script, executable, binary, etc.) named
# 'post-revprop-change' (for which this file is a template), with the
# f... | Shell |
#!/bin/sh
# POST-LOCK HOOK
#
# The post-lock hook is run after a path is locked. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-lock' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this repos... | Shell |
#!/bin/sh
# POST-LOCK HOOK
#
# The post-lock hook is run after a path is locked. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-lock' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this repos... | Shell |
#!/bin/sh
# PRE-LOCK HOOK
#
# The pre-lock hook is invoked before an exclusive lock is
# created. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-lock' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH (the pat... | Shell |
#!/bin/sh
# POST-UNLOCK HOOK
#
# The post-unlock hook runs after a path is unlocked. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-unlock' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this... | Shell |
#!/bin/sh
# PRE-COMMIT HOOK
#
# The pre-commit hook is invoked before a Subversion txn is
# committed. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-commit' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH (t... | Shell |
#!/bin/sh
# PRE-UNLOCK HOOK
#
# The pre-unlock hook is invoked before an exclusive lock is
# destroyed. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-unlock' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH ... | Shell |
#!/bin/sh
# POST-REVPROP-CHANGE HOOK
#
# The post-revprop-change hook is invoked after a revision property
# has been added, modified or deleted. Subversion runs this hook by
# invoking a program (script, executable, binary, etc.) named
# 'post-revprop-change' (for which this file is a template), with the
# f... | Shell |
#!/bin/sh
# POST-COMMIT HOOK
#
# The post-commit hook is invoked after a commit. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-commit' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this rep... | Shell |
#!/bin/sh
# START-COMMIT HOOK
#
# The start-commit hook is invoked before a Subversion txn is created
# in the process of doing a commit. Subversion runs this hook
# by invoking a program (script, executable, binary, etc.) named
# 'start-commit' (for which this file is a template)
# with the following ordered... | Shell |
#!/bin/sh
# PRE-REVPROP-CHANGE HOOK
#
# The pre-revprop-change hook is invoked before a revision property
# is added, modified or deleted. Subversion runs this hook by invoking
# a program (script, executable, binary, etc.) named 'pre-revprop-change'
# (for which this file is a template), with the following or... | Shell |
#!/bin/sh
# PRE-LOCK HOOK
#
# The pre-lock hook is invoked before an exclusive lock is
# created. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-lock' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH (the pat... | Shell |
#!/bin/sh
# PRE-UNLOCK HOOK
#
# The pre-unlock hook is invoked before an exclusive lock is
# destroyed. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-unlock' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH ... | Shell |
#!/bin/sh
# POST-COMMIT HOOK
#
# The post-commit hook is invoked after a commit. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-commit' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this rep... | Shell |
#!/bin/sh
# PRE-COMMIT HOOK
#
# The pre-commit hook is invoked before a Subversion txn is
# committed. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-commit' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH (t... | Shell |
#!/bin/sh
# PRE-REVPROP-CHANGE HOOK
#
# The pre-revprop-change hook is invoked before a revision property
# is added, modified or deleted. Subversion runs this hook by invoking
# a program (script, executable, binary, etc.) named 'pre-revprop-change'
# (for which this file is a template), with the following or... | Shell |
#!/bin/sh
# POST-UNLOCK HOOK
#
# The post-unlock hook runs after a path is unlocked. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-unlock' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this... | Shell |
#!/bin/sh
# START-COMMIT HOOK
#
# The start-commit hook is invoked before a Subversion txn is created
# in the process of doing a commit. Subversion runs this hook
# by invoking a program (script, executable, binary, etc.) named
# 'start-commit' (for which this file is a template)
# with the following ordered... | Shell |
#!/bin/sh
# POST-REVPROP-CHANGE HOOK
#
# The post-revprop-change hook is invoked after a revision property
# has been added, modified or deleted. Subversion runs this hook by
# invoking a program (script, executable, binary, etc.) named
# 'post-revprop-change' (for which this file is a template), with the
# f... | Shell |
#!/bin/sh
# POST-LOCK HOOK
#
# The post-lock hook is run after a path is locked. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-lock' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this repos... | Shell |
#!/bin/sh
# POST-LOCK HOOK
#
# The post-lock hook is run after a path is locked. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-lock' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this repos... | Shell |
#!/bin/sh
# PRE-LOCK HOOK
#
# The pre-lock hook is invoked before an exclusive lock is
# created. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-lock' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH (the pat... | Shell |
#!/bin/sh
# POST-UNLOCK HOOK
#
# The post-unlock hook runs after a path is unlocked. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-unlock' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this... | Shell |
#!/bin/sh
# PRE-COMMIT HOOK
#
# The pre-commit hook is invoked before a Subversion txn is
# committed. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-commit' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH (t... | Shell |
#!/bin/sh
# PRE-UNLOCK HOOK
#
# The pre-unlock hook is invoked before an exclusive lock is
# destroyed. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-unlock' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH ... | Shell |
#!/bin/sh
# POST-REVPROP-CHANGE HOOK
#
# The post-revprop-change hook is invoked after a revision property
# has been added, modified or deleted. Subversion runs this hook by
# invoking a program (script, executable, binary, etc.) named
# 'post-revprop-change' (for which this file is a template), with the
# f... | Shell |
#!/bin/sh
# POST-COMMIT HOOK
#
# The post-commit hook is invoked after a commit. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-commit' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this rep... | Shell |
#!/bin/sh
# START-COMMIT HOOK
#
# The start-commit hook is invoked before a Subversion txn is created
# in the process of doing a commit. Subversion runs this hook
# by invoking a program (script, executable, binary, etc.) named
# 'start-commit' (for which this file is a template)
# with the following ordered... | Shell |
#!/bin/sh
# PRE-REVPROP-CHANGE HOOK
#
# The pre-revprop-change hook is invoked before a revision property
# is added, modified or deleted. Subversion runs this hook by invoking
# a program (script, executable, binary, etc.) named 'pre-revprop-change'
# (for which this file is a template), with the following or... | Shell |
#!/bin/sh
# PRE-LOCK HOOK
#
# The pre-lock hook is invoked before an exclusive lock is
# created. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-lock' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH (the pat... | Shell |
#!/bin/sh
# PRE-UNLOCK HOOK
#
# The pre-unlock hook is invoked before an exclusive lock is
# destroyed. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-unlock' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH ... | Shell |
#!/bin/sh
# POST-COMMIT HOOK
#
# The post-commit hook is invoked after a commit. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-commit' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this rep... | Shell |
#!/bin/sh
# PRE-COMMIT HOOK
#
# The pre-commit hook is invoked before a Subversion txn is
# committed. Subversion runs this hook by invoking a program
# (script, executable, binary, etc.) named 'pre-commit' (for which
# this file is a template), with the following ordered arguments:
#
# [1] REPOS-PATH (t... | Shell |
#!/bin/sh
# PRE-REVPROP-CHANGE HOOK
#
# The pre-revprop-change hook is invoked before a revision property
# is added, modified or deleted. Subversion runs this hook by invoking
# a program (script, executable, binary, etc.) named 'pre-revprop-change'
# (for which this file is a template), with the following or... | Shell |
#!/bin/sh
# POST-UNLOCK HOOK
#
# The post-unlock hook runs after a path is unlocked. Subversion runs
# this hook by invoking a program (script, executable, binary, etc.)
# named 'post-unlock' (for which this file is a template) with the
# following ordered arguments:
#
# [1] REPOS-PATH (the path to this... | Shell |
#!/bin/bash
################################################################################
#
# Bake is a shell script for running CakePHP bake script
# PHP versions 4 and 5
#
# CakePHP(tm) : Rapid Development Framework (http://www.cakephp.org)
# Copyright 2005-2007, Cake Software Foundation, Inc.
#
# Licensed under ... | Shell |
#!/bin/bash
################################################################################
#
# Bake is a shell script for running CakePHP bake script
# PHP versions 4 and 5
#
# CakePHP(tm) : Rapid Development Framework (http://www.cakephp.org)
# Copyright 2005-2007, Cake Software Foundation, Inc.
#
# Licensed under ... | Shell |
source ../testsupport.sh
run foo.txt test.bed
# the output file is a filter, which acts on test.bed, so the output should be
# test.hello.bed and NOT foo.hello.bed
exists test.hello.bed
| Shell |
rm -f *.hello.bed
| Shell |
source ../testsupport.sh
run test.txt
grep -q "Stage hello" test.out || err "Failed to find expected stage hello"
grep -q "Stage world" test.out || err "Failed to find expected stage world"
[ ! -f test.txt.hello ] && err "Failed to find expected output test.txt"
[ ! -f test.txt.hello.world ] && err "Failed to find e... | Shell |
rm -f test.txt.* null
| Shell |
source ../testsupport.sh
rm -f test.txt.*
run test.txt
grep -q "Stage hello" test.out || err "Failed to find expected stage hello"
grep -q "Stage world" test.out || err "Failed to find expected stage world"
[ ! -f test.txt.hello ] && err "Failed to find expected output test.txt"
[ ! -f test.txt.hello.world ] && err... | Shell |
source ../testsupport.sh
run test*.txt
[ `grep -c "Stage hello" test.out` == 3 ] || err "Failed to find expected stage hello 3 times"
[ ! -f test.chr1.hello.csv ] && err "Failed to find expected output test.chr1.hello.csv"
[ ! -f test.chr2.hello.csv ] && err "Failed to find expected output test.chr2.hello.csv"
[ ! ... | Shell |
rm -rf *.csv
| Shell |
source ../testsupport.sh
. ./cleanup.sh
run childdir/s_*.txt
grep -q "Stage dedupe" test.out || err "Failed to find expected stage dedupe"
grep -q "Stage align" test.out || err "Failed to find expected stage align"
[ ! -f s_1_1.align.csv ] && err "Failed to find expected output s_1_1.align.csv"
[ ! -f s_2_1.align.... | Shell |
rm -f *align* *.csv
| Shell |
source ../testsupport.sh
run *.bam
[ `grep -c "Using bam file test.chr1.bam" test.out` == 2 ] || err "Incorrect number of references to test.chr1.bam"
true
| Shell |
rm -f *.vcf *.txt
| Shell |
source ../testsupport.sh
rm -f test.txt.* *.xml hello.*
# Without an input should get a good message back
run
grep -q "Input expected but not provided" test.out || err "Expected error message asking for input"
# Now run with multiple inputs
run test.csv test.txt
grep -q "Stage hello" test.out || err "Failed to fin... | Shell |
source ../testsupport.sh
rm -f test.world.txt test.txt
run
grep -q "Stage hello" test.out || err "Failed to find expected stage hello"
grep -q "Stage world" test.out || err "Failed to find expected stage world"
grep -q "1 2 3 4" test.out || err "Failed to find expeced output '1 1 cow'"
true
| Shell |
source ../testsupport.sh
run test.txt
exists test.txt.hello
true
| Shell |
rm -f test.txt.*
| Shell |
source ../testsupport.sh
run test.fastq
exists test.align.bai
exists test.align.bam
exists test.align.filter_bam.bam
bpipe cleanup -y >> test.out
exists test.align.filter_bam.bam
# Should be cleaned up because it is an internal node
notexists test.align.bam
# Should be cleaned up because it accompanies an interna... | Shell |
rm -rf .bpipe *.bai *.bam
| Shell |
source ../testsupport.sh
run test*.txt
exists test1.hello.csv test1.2.hello.csv
| Shell |
rm -f *.csv
| Shell |
source ../testsupport.sh
run
grep -q "Stage hello" test.out || err "Failed to find expected stage hello"
true
| Shell |
source ../testsupport.sh
rm foo.txt bar.txt foo.csv foo.txt.world
run test.txt
grep -q "Stage hello" test.out || err "Failed to find expected stage hello"
grep -q "Stage world" test.out || err "Failed to find expected stage world"
[ ! -f foo.txt.world ] && err "Failed to find expected output foo.txt.world"
sort ... | Shell |
rm -f foo.txt bar.txt foo.csv foo.txt.world null
| Shell |
source ../testsupport.sh
run test1.txt test2.txt
exists test1.merge.csv
true
| Shell |
rm -f *.merge.*
| Shell |
#!/bin/bash
# A very minimal test script
if [ "$1" == "start" ];
then
#echo "Starting $*"
echo "$COMMAND" >> dummy2.log.txt
bash -c "if $COMMAND ; then echo 0 > $$.txt ; else echo 1 > $$.txt; fi" &
PROCID=$!
echo $PROCID
echo $$ > $PROCID.id.txt
elif [ "$1" == "status" ];
then
SHELL_PROC_ID=`cat $2.id.tx... | Shell |
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