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f355580 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 | """Compute the surface field errors and the integral force coefficients from the meshes.
Every prediction mesh should contain both the CFD ground truth and the prediction of each surface
field.
Field errors
Computed per run for the pressure coefficient Cp and the wall shear stress magnitude |ws|.
With ground truth t, prediction p, error e = p - t and N surface elements, an absolute and
a relative family of metrics is stored:
mse_abs = mean(e^2) l1_abs = mean(|e|)
l2_abs = sqrt(sum(e^2)) rmse_abs = sqrt(mse_abs)
srmse = rmse_abs / std(t)
mse_rel = sum(e^2) / sum(t^2) l1_rel = sum(|e|) / sum(|t|)
l2_rel = sqrt(sum(e^2) / sum(t^2))
r2 = 1 - sum(e^2) / sum((t - mean(t))^2)
Force coefficients
Drag and lift are integrated over the surface from the cell areas A, the cell normals n and
the dynamic pressure q:
F/q = sum(Cp * n * A) + sum(tau * A) / q
Cd = (F/q)_x / reference_area
Cl = (F/q)_z / reference_area
Writes outputs per split and per model under outputs/metrics/, merged into field_metrics.csv
and coefficients.csv.
Existing files are reused unless --force is given.
Run this before coefficient_error.py and field_screenshots.py, which read its output.
Examples:
python3 surface_metrics.py # everything, 8 workers
python3 surface_metrics.py --splits stratified --models abupt
python3 surface_metrics.py --force --workers 6
"""
from __future__ import annotations
import argparse
import multiprocessing as mp
import os
import sys
from pathlib import Path
import numpy as np
import pandas as pd
sys.path.insert(0, str(Path(__file__).resolve().parent))
from inference_io import ( # noqa: E402
all_model_labels,
coeff_columns,
field_keys,
mesh_files,
mesh_models,
metrics_dir,
read_field,
splits as all_splits,
)
# Flow conditions of the dataset, as configured for every model's training run.
air_density = 1.18858
stream_velocity = 50.0
reference_area = 1.0
dynamic_pressure = 0.5 * air_density * stream_velocity**2
metric_columns = [
"n",
"t_mean",
"t_std",
"p_mean",
"p_std",
"mse_abs",
"l1_abs",
"l2_abs",
"rmse_abs",
"srmse",
"mse_rel",
"l1_rel",
"l2_rel",
"r2",
]
field_columns = ["split", "model", "run_id", "field", *metric_columns]
coefficient_columns = ["split", "model", "run_id", *coeff_columns]
def _magnitude(values: np.ndarray) -> np.ndarray:
"""Collapse a vector field to its magnitude; scalars pass through."""
return np.linalg.norm(values, axis=1) if values.ndim == 2 else values
def _metrics(truth: np.ndarray, pred: np.ndarray) -> dict[str, float]:
error = pred - truth
sq_error = float(np.sum(error**2))
sq_truth = float(np.sum(truth**2))
n = truth.size
variance = float(np.sum((truth - truth.mean()) ** 2))
mse_abs = sq_error / n
return {
"n": n,
"t_mean": float(truth.mean()),
"t_std": float(truth.std()),
"p_mean": float(pred.mean()),
"p_std": float(pred.std()),
"mse_abs": mse_abs,
"l1_abs": float(np.abs(error).mean()),
"l2_abs": float(np.sqrt(sq_error)),
"rmse_abs": float(np.sqrt(mse_abs)),
"srmse": float(np.sqrt(mse_abs) / truth.std()) if truth.std() > 0 else np.nan,
"mse_rel": sq_error / sq_truth if sq_truth > 0 else np.nan,
"l1_rel": float(np.abs(error).sum() / np.abs(truth).sum())
if np.abs(truth).sum() > 0
else np.nan,
"l2_rel": float(np.sqrt(sq_error / sq_truth)) if sq_truth > 0 else np.nan,
"r2": 1.0 - sq_error / variance if variance > 0 else np.nan,
}
def _coefficients(mesh) -> dict[str, float]:
"""Drag and lift of the ground truth and of the prediction, by surface integration."""
# The fields are cell data for most models and point data for X-MeshGraphNet; the integral
# needs one value per cell either way.
if "MeanPressureCoefficient" in mesh.point_data:
mesh = mesh.point_data_to_cell_data(pass_point_data=False)
areas = np.asarray(
mesh.compute_cell_sizes(length=False, area=True, volume=False).cell_data["Area"],
dtype=np.float64,
)
normals = np.asarray(
mesh.compute_normals(
cell_normals=True,
point_normals=False,
consistent_normals=False,
auto_orient_normals=False,
).cell_data["Normals"],
dtype=np.float64,
)
arrays = {
f"{name}{suffix}": read_field(mesh, f"{name}{suffix}")
for name in field_keys
for suffix in ("", "Pred")
}
# One mask for all four arrays, so the truth and the prediction are integrated over exactly
# the same cells even when a prediction is non-finite on one of them.
finite = np.ones(len(areas), dtype=bool)
for values in arrays.values():
finite &= np.isfinite(values).all(axis=1) if values.ndim == 2 else np.isfinite(values)
out = {}
for suffix in ("", "Pred"):
cp = arrays[f"MeanPressureCoefficient{suffix}"][finite]
shear = arrays[f"MeanWallShearStress{suffix}"][finite]
force = (cp[:, None] * normals[finite] * areas[finite, None]).sum(axis=0)
force += (shear * areas[finite, None]).sum(axis=0) / dynamic_pressure
out[f"Cd{suffix}"] = float(force[0] / reference_area)
out[f"Cl{suffix}"] = float(force[2] / reference_area)
return out
def _process(task: tuple[str, str, str, str]) -> tuple[list[dict], dict]:
"""Worker: read one mesh and return its field rows and its coefficient row."""
import pyvista as pv
split, model, run_id, path = task
mesh = pv.read(path)
rows = []
for array, field in field_keys.items():
truth = _magnitude(read_field(mesh, array))
pred = _magnitude(read_field(mesh, f"{array}Pred"))
if truth.shape != pred.shape:
raise ValueError(
f"{path}: {array} shape {truth.shape} != prediction {pred.shape}"
)
# Non-finite elements are dropped so the run still yields a metric; `n` records how
# many elements were actually used.
finite = np.isfinite(truth) & np.isfinite(pred)
if not finite.all():
print(f" {run_id} {field}: dropped {int((~finite).sum())} "
f"non-finite element(s) of {finite.size}", flush=True)
truth, pred = truth[finite], pred[finite]
rows.append(
{"split": split, "model": model, "run_id": run_id, "field": field,
**_metrics(truth, pred)}
)
coefficients = {"split": split, "model": model, "run_id": run_id, **_coefficients(mesh)}
return rows, coefficients
def _shard_paths(split: str, model: str) -> tuple[Path, Path]:
return (
metrics_dir / f"{split}__{model}__fields.csv",
metrics_dir / f"{split}__{model}__coefficients.csv",
)
def compute_shard(split: str, model: str, workers: int, force: bool) -> None:
"""Compute (or reuse) the field metrics and coefficients for one split/model."""
field_path, coeff_path = _shard_paths(split, model)
if field_path.exists() and coeff_path.exists() and not force:
print(f" {split}/{model}: cached ({field_path.name})", flush=True)
return
meshes = mesh_files(split, model)
tasks = [(split, model, run_id, str(p)) for run_id, p in meshes.items()]
print(f" {split}/{model}: {len(tasks)} meshes on {workers} workers", flush=True)
field_rows: list[dict] = []
coeff_rows: list[dict] = []
with mp.Pool(processes=workers) as pool:
for i, (rows, coefficients) in enumerate(
pool.imap_unordered(_process, tasks, chunksize=1), 1
):
field_rows.extend(rows)
coeff_rows.append(coefficients)
if i % 10 == 0 or i == len(tasks):
print(f" {i}/{len(tasks)}", flush=True)
metrics_dir.mkdir(parents=True, exist_ok=True)
(
pd.DataFrame(field_rows, columns=field_columns)
.sort_values(["run_id", "field"])
.reset_index(drop=True)
.to_csv(field_path, index=False)
)
(
pd.DataFrame(coeff_rows, columns=coefficient_columns)
.sort_values("run_id")
.reset_index(drop=True)
.to_csv(coeff_path, index=False)
)
def _merge(pattern: str, sort_by: list[str], out_name: str) -> pd.DataFrame:
"""Concatenate every shard matching `pattern` into one file under outputs/metrics/."""
paths = sorted(metrics_dir.glob(pattern))
if not paths:
raise FileNotFoundError(f"no shards matching {pattern} under {metrics_dir}")
merged = pd.concat(
[pd.read_csv(p, dtype={"run_id": str}) for p in paths], ignore_index=True
)
split_order = {name: i for i, name in enumerate(all_splits)}
model_order = {name: i for i, name in enumerate(all_model_labels)}
merged = merged.sort_values(
sort_by,
key=lambda s: s.map(split_order) if s.name == "split"
else (s.map(model_order) if s.name == "model" else s),
).reset_index(drop=True)
out = metrics_dir / out_name
merged.to_csv(out, index=False)
print(f"wrote {out} ({len(merged)} rows)")
return merged
def merge_shards() -> pd.DataFrame:
"""Merge both shard families; returns the field metrics."""
print()
_merge("*__coefficients.csv", ["split", "model", "run_id"], "coefficients.csv")
return _merge(
"*__fields.csv", ["split", "model", "run_id", "field"], "field_metrics.csv"
)
def main() -> None:
parser = argparse.ArgumentParser(description=__doc__.split("\n")[0])
parser.add_argument("--splits", nargs="+", default=all_splits, choices=all_splits)
parser.add_argument("--models", nargs="+", default=mesh_models(),
choices=list(all_model_labels))
parser.add_argument("--workers", type=int,
default=max(1, min(8, (os.cpu_count() or 4) - 2)))
parser.add_argument("--force", action="store_true",
help="recompute shards that already exist")
args = parser.parse_args()
for split in args.splits:
print(f"{split}:")
for model in args.models:
compute_shard(split, model, args.workers, args.force)
merged = merge_shards()
summary = (
merged.groupby(["split", "model", "field"], sort=False)
.agg(runs=("run_id", "nunique"), l2_rel=("l2_rel", "mean"), mse=("mse_abs", "mean"))
.reset_index()
)
print(summary.to_string(index=False))
if __name__ == "__main__":
main()
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