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<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _get_c_string(data, position): """Decode a BSON 'C' string to python unicode string."""
end = data.index(b"\x00", position) return _utf_8_decode(data[position:end], None, True)[0], end + 1
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _synchronized(meth): """Call method while holding a lock."""
@functools.wraps(meth) def wrapper(self, *args, **kwargs): with self._lock: return meth(self, *args, **kwargs) return wrapper
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def mock_server_receive_request(client, server): """Take a client socket and return a Request."""
header = mock_server_receive(client, 16) length = _UNPACK_INT(header[:4])[0] request_id = _UNPACK_INT(header[4:8])[0] opcode = _UNPACK_INT(header[12:])[0] msg_bytes = mock_server_receive(client, length - 16) if opcode not in OPCODES: raise NotImplementedError("Don't know how to unpack o...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def mock_server_receive(sock, length): """Receive `length` bytes from a socket object."""
msg = b'' while length: chunk = sock.recv(length) if chunk == b'': raise socket.error(errno.ECONNRESET, 'closed') length -= len(chunk) msg += chunk return msg
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def make_docs(*args, **kwargs): """Make the documents for a `Request` or `Reply`. Takes a variety of argument styles, returns a list of dicts. Used by `make_prot...
err_msg = "Can't interpret args: " if not args and not kwargs: return [] if not args: # OpReply(ok=1, ismaster=True). return [kwargs] if isinstance(args[0], (int, float, bool)): # server.receives().ok(0, err='uh oh'). if args[1:]: raise_args_err(err...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def make_prototype_request(*args, **kwargs): """Make a prototype Request for a Matcher."""
if args and inspect.isclass(args[0]) and issubclass(args[0], Request): request_cls, arg_list = args[0], args[1:] return request_cls(*arg_list, **kwargs) if args and isinstance(args[0], Request): if args[1:] or kwargs: raise_args_err("can't interpret args") return arg...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def docs_repr(*args): """Stringify ordered dicts like a regular ones. Preserve order, remove 'u'-prefix on unicodes in Python 2: {"_id": 2} {"_id": 2, "a": "b"},...
sio = StringIO() for doc_idx, doc in enumerate(args): if doc_idx > 0: sio.write(u', ') sio.write(text_type(json_util.dumps(doc))) return sio.getvalue()
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def seq_match(seq0, seq1): """True if seq0 is a subset of seq1 and their elements are in same order. True True False True True True True False """
len_seq1 = len(seq1) if len_seq1 < len(seq0): return False seq1_idx = 0 for i, elem in enumerate(seq0): while seq1_idx < len_seq1: if seq1[seq1_idx] == elem: break seq1_idx += 1 if seq1_idx >= len_seq1 or seq1[seq1_idx] != elem: ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def raise_args_err(message='bad arguments', error_class=TypeError): """Throw an error with standard message, displaying function call. Traceback (most recent cal...
frame = inspect.currentframe().f_back raise error_class(message + ': ' + format_call(frame))
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def interactive_server(port=27017, verbose=True, all_ok=False, name='MockupDB', ssl=False, uds_path=None): """A `MockupDB` that the mongo shell can connect to. C...
if uds_path is not None: port = None server = MockupDB(port=port, verbose=verbose, request_timeout=int(1e6), ssl=ssl, auto_ismaster=True, uds_path=uds_path) if all_ok: server.appen...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def client_port(self): """Client connection's TCP port."""
address = self._client.getpeername() if isinstance(address, tuple): return address[1] # Maybe a Unix domain socket connection. return 0
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def command_err(self, code=1, errmsg='MockupDB command failure', *args, **kwargs): """Error reply to a command. Returns True so it is suitable as an `~MockupDB.a...
kwargs.setdefault('ok', 0) kwargs['code'] = code kwargs['errmsg'] = errmsg self.replies(*args, **kwargs) return True
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def unpack(cls, msg, client, server, request_id): """Parse message and return an `OpMsg`. Takes the client message as bytes, the client and server socket objects...
payload_document = OrderedDict() flags, = _UNPACK_UINT(msg[:4]) pos = 4 if flags != 0 and flags != 2: raise ValueError('OP_MSG flag must be 0 or 2 not %r' % (flags,)) while pos < len(msg): payload_type, = _UNPACK_BYTE(msg[pos:pos + 1]) pos +=...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def unpack(cls, msg, client, server, request_id): """Parse message and return an `OpQuery` or `Command`. Takes the client message as bytes, the client and server...
flags, = _UNPACK_INT(msg[:4]) namespace, pos = _get_c_string(msg, 4) is_command = namespace.endswith('.$cmd') num_to_skip, = _UNPACK_INT(msg[pos:pos + 4]) pos += 4 num_to_return, = _UNPACK_INT(msg[pos:pos + 4]) pos += 4 docs = bson.decode_all(msg[pos:], C...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def unpack(cls, msg, client, server, request_id): """Parse message and return an `OpGetMore`. Takes the client message as bytes, the client and server socket obj...
flags, = _UNPACK_INT(msg[:4]) namespace, pos = _get_c_string(msg, 4) num_to_return, = _UNPACK_INT(msg[pos:pos + 4]) pos += 4 cursor_id, = _UNPACK_LONG(msg[pos:pos + 8]) return OpGetMore(namespace=namespace, flags=flags, _client=client, num_to_ret...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def unpack(cls, msg, client, server, _): """Parse message and return an `OpKillCursors`. Takes the client message as bytes, the client and server socket objects,...
# Leading 4 bytes are reserved. num_of_cursor_ids, = _UNPACK_INT(msg[4:8]) cursor_ids = [] pos = 8 for _ in range(num_of_cursor_ids): cursor_ids.append(_UNPACK_INT(msg[pos:pos + 4])[0]) pos += 4 return OpKillCursors(_client=client, cursor_ids=curs...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def unpack(cls, msg, client, server, request_id): """Parse message and return an `OpInsert`. Takes the client message as bytes, the client and server socket obje...
flags, = _UNPACK_INT(msg[:4]) namespace, pos = _get_c_string(msg, 4) docs = bson.decode_all(msg[pos:], CODEC_OPTIONS) return cls(*docs, namespace=namespace, flags=flags, _client=client, request_id=request_id, _server=server)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def reply_bytes(self, request): """Take a `Request` and return an OP_REPLY message as bytes."""
flags = struct.pack("<i", self._flags) cursor_id = struct.pack("<q", self._cursor_id) starting_from = struct.pack("<i", self._starting_from) number_returned = struct.pack("<i", len(self._docs)) reply_id = random.randint(0, 1000000) response_to = request.request_id ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def reply_bytes(self, request): """Take a `Request` and return an OP_MSG message as bytes."""
flags = struct.pack("<I", self._flags) payload_type = struct.pack("<b", 0) payload_data = bson.BSON.encode(self.doc) data = b''.join([flags, payload_type, payload_data]) reply_id = random.randint(0, 1000000) response_to = request.request_id header = struct.pack...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def run(self): """Begin serving. Returns the bound port, or 0 for domain socket."""
self._listening_sock, self._address = ( bind_domain_socket(self._address) if self._uds_path else bind_tcp_socket(self._address)) if self._ssl: certfile = os.path.join(os.path.dirname(__file__), 'server.pem') self._listening_sock = _ssl.wrap_s...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def stop(self): """Stop serving. Always call this to clean up after yourself."""
self._stopped = True threads = [self._accept_thread] threads.extend(self._server_threads) self._listening_sock.close() for sock in list(self._server_socks): try: sock.shutdown(socket.SHUT_RDWR) except socket.error: pass ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def receives(self, *args, **kwargs): """Pop the next `Request` and assert it matches. Returns None if the server is stopped. Pass a `Request` or request pattern ...
timeout = kwargs.pop('timeout', self._request_timeout) end = time.time() + timeout matcher = Matcher(*args, **kwargs) while not self._stopped: try: # Short timeout so we notice if the server is stopped. request = self._request_q.get(timeout=0....
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def autoresponds(self, matcher, *args, **kwargs): """Send a canned reply to all matching client requests. ``matcher`` is a `Matcher` or a command name, or an ins...
return self._insert_responder("top", matcher, *args, **kwargs)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def append_responder(self, matcher, *args, **kwargs): """Add a responder of last resort. Like `.autoresponds`, but instead of adding a responder to the top of th...
return self._insert_responder("bottom", matcher, *args, **kwargs)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def uri(self): """Connection string to pass to `~pymongo.mongo_client.MongoClient`."""
if self._uds_path: uri = 'mongodb://%s' % (quote_plus(self._uds_path),) else: uri = 'mongodb://%s' % (format_addr(self._address),) return uri + '/?ssl=true' if self._ssl else uri
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _accept_loop(self): """Accept client connections and spawn a thread for each."""
self._listening_sock.setblocking(0) while not self._stopped and not _shutting_down: try: # Wait a short time to accept. if select.select([self._listening_sock.fileno()], [], [], 1): client, client_addr = self._listening_sock.accept() ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _server_loop(self, client, client_addr): """Read requests from one client socket, 'client'."""
while not self._stopped and not _shutting_down: try: with self._unlock(): request = mock_server_receive_request(client, self) self._requests_count += 1 self._log('%d\t%r' % (request.client_port, request)) # Give m...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def check_password(self, username, password): """The actual password checking logic. Separated from the authenticate code from Django for easier updating"""
try: if SUPPORTS_VERIFY: kerberos.checkPassword(username.lower(), password, getattr(settings, "KRB5_SERVICE", ""), getattr(settings, "KRB5_REALM", ""), getattr(settings, "KRB5_VERIFY_KDC", True)) else: kerberos.checkPassword(username.lower(), password, ge...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def main(): """Start an interactive `MockupDB`. Use like ``python -m mockupdb``. """
from optparse import OptionParser parser = OptionParser('Start mock MongoDB server') parser.add_option('-p', '--port', dest='port', default=27017, help='port on which mock mongod listens') parser.add_option('-q', '--quiet', action='store_false', dest='verbose...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _initialize_distance_grid(self): """Initialize the distance grid by calls to _grid_dist."""
p = [self._grid_distance(i) for i in range(self.num_neurons)] return np.array(p)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _grid_distance(self, index): """ Calculate the distance grid for a single index position. This is pre-calculated for fast neighborhood calculations later on ...
# Take every dimension but the first in reverse # then reverse that list again. dimensions = np.cumprod(self.map_dimensions[1::][::-1])[::-1] coord = [] for idx, dim in enumerate(dimensions): if idx != 0: value = (index % dimensions[idx-1]) // dim ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def topographic_error(self, X, batch_size=1): """ Calculate the topographic error. The topographic error is a measure of the spatial organization of the map. Map...
dist = self.transform(X, batch_size) # Sort the distances and get the indices of the two smallest distances # for each datapoint. res = dist.argsort(1)[:, :2] # Lookup the euclidean distance between these points in the distance # grid dgrid = self.distance_grid.r...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def neighbors(self, distance=2.0): """Get all neighbors for all neurons."""
dgrid = self.distance_grid.reshape(self.num_neurons, self.num_neurons) for x, y in zip(*np.nonzero(dgrid <= distance)): if x != y: yield x, y
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def neighbor_difference(self): """Get the euclidean distance between a node and its neighbors."""
differences = np.zeros(self.num_neurons) num_neighbors = np.zeros(self.num_neurons) distance, _ = self.distance_function(self.weights, self.weights) for x, y in self.neighbors(): differences[x] += distance[x, y] num_neighbors[x] += 1 return differences ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def spread(self, X): """ Calculate the average spread for each node. The average spread is a measure of how far each neuron is from the data points which cluster...
distance, _ = self.distance_function(X, self.weights) dists_per_neuron = defaultdict(list) for x, y in zip(np.argmin(distance, 1), distance): dists_per_neuron[x].append(y[x]) out = np.zeros(self.num_neurons) average_spread = {k: np.mean(v) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def receptive_field(self, X, identities, max_len=10, threshold=0.9, batch_size=1): """ Calculate the receptive field of the SOM on some data. The receptive field...
receptive_fields = defaultdict(list) predictions = self.predict(X, batch_size) if len(predictions) != len(identities): raise ValueError("X and identities are not the same length: " "{0} and {1}".format(len(X), len(identities))) for idx, p in en...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def invert_projection(self, X, identities): """ Calculate the inverted projection. The inverted projectio of a SOM is created by association each weight with the...
distances = self.transform(X) if len(distances) != len(identities): raise ValueError("X and identities are not the same length: " "{0} and {1}".format(len(X), len(identities))) node_match = [] for d in distances.__getattribute__(self.argfunc)(...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def map_weights(self): """ Reshaped weights for visualization. The weights are reshaped as (W.shape[0], prod(W.shape[1:-1]), W.shape[2]). This allows one to easi...
first_dim = self.map_dimensions[0] if len(self.map_dimensions) != 1: second_dim = np.prod(self.map_dimensions[1:]) else: second_dim = 1 # Reshape to appropriate dimensions return self.weights.reshape((first_dim, secon...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def load(cls, path): """ Load a SOM from a JSON file saved with this package.. Parameters path : str The path to the JSON file. Returns ------- s : cls A som of ...
data = json.load(open(path)) weights = data['weights'] weights = np.asarray(weights, dtype=np.float64) s = cls(data['map_dimensions'], data['params']['lr']['orig'], data['data_dimensionality'], influence=data['params']['infl']['orig'], ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def remove_dirs(self, directory): """Delete a directory recursively. :param directory: $PATH to directory. :type directory: ``str`` """
LOG.info('Removing directory [ %s ]', directory) local_files = self._drectory_local_files(directory=directory) for file_name in local_files: try: os.remove(file_name['local_object']) except OSError as exp: LOG.error(str(exp)) # B...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _return_container_objects(self): """Return a list of objects to delete. The return tuple will indicate if it was a userd efined list of objects as True of Fa...
container_objects = self.job_args.get('object') if container_objects: return True, [{'container_object': i} for i in container_objects] container_objects = self.job_args.get('objects_file') if container_objects: container_objects = os.path.expanduser(container_...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _index_fs(self): """Returns a deque object full of local file system items. :returns: ``deque`` """
indexed_objects = self._return_deque() directory = self.job_args.get('directory') if directory: indexed_objects = self._return_deque( deque=indexed_objects, item=self._drectory_local_files( directory=directory ) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def match_filter(self, idx_list, pattern, dict_type=False, dict_key='name'): """Return Matched items in indexed files. :param idx_list: :return list """
if dict_type is False: return self._return_deque([ obj for obj in idx_list if re.search(pattern, obj) ]) elif dict_type is True: return self._return_deque([ obj for obj in idx_list if re.search(pattern,...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def print_horiz_table(self, data): """Print a horizontal pretty table from data."""
# Build list of returned objects return_objects = list() fields = self.job_args.get('fields') if not fields: fields = set() for item_dict in data: for field_item in item_dict.keys(): fields.add(field_item) fields =...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def print_virt_table(self, data): """Print a vertical pretty table from data."""
table = prettytable.PrettyTable() keys = sorted(data.keys()) table.add_column('Keys', keys) table.add_column('Values', [data.get(i) for i in keys]) for tbl in table.align.keys(): table.align[tbl] = 'l' self.printer(table)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def printer(self, message, color_level='info'): """Print Messages and Log it. :param message: item to print to screen """
if self.job_args.get('colorized'): print(cloud_utils.return_colorized(msg=message, color=color_level)) else: print(message)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _get_method(method): """Return an imported object. :param method: ``str`` DOT notation for import with Colin used to separate the class used for the job. :re...
# Split the class out from the job module = method.split(':') # Set the import module _module_import = module[0] # Set the class name to use class_name = module[-1] # import the module module_import = __import__(_module_import, fromlist=[class_name]) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def run_manager(self, job_override=None): """The run manager. The run manager is responsible for loading the plugin required based on what the user has inputted ...
for arg_name, arg_value in self.job_args.items(): if arg_name.endswith('_headers'): if isinstance(arg_value, list): self.job_args[arg_name] = self._list_headers( headers=arg_value ) elif not arg_name: ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def range_initialization(X, num_weights): """ Initialize the weights by calculating the range of the data. The data range is calculated by reshaping the input ma...
# Randomly initialize weights to cover the range of each feature. X_ = X.reshape(-1, X.shape[-1]) min_val, max_val = X_.min(0), X_.max(0) data_range = max_val - min_val return data_range * np.random.rand(num_weights, X.shape[-1]) + min_val
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def fit(self, X, num_epochs=10, updates_epoch=None, stop_param_updates=dict(), batch_size=1, show_progressbar=False, show_epoch=False, refit=True): """ Fit the l...
if self.data_dimensionality is None: self.data_dimensionality = X.shape[-1] self.weights = np.zeros((self.num_neurons, self.data_dimensionality)) X = self._check_input(X) if not self.trained or refit: X = self._init_weight...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _init_weights(self, X): """Set the weights and normalize data before starting training."""
X = np.asarray(X, dtype=np.float64) if self.scaler is not None: X = self.scaler.fit_transform(X) if self.initializer is not None: self.weights = self.initializer(X, self.num_neurons) for v in self.params.values(): v['value'] = v['orig'] re...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _pre_train(self, stop_param_updates, num_epochs, updates_epoch): """Set parameters and constants before training."""
# Calculate the total number of updates given early stopping. updates = {k: stop_param_updates.get(k, num_epochs) * updates_epoch for k, v in self.params.items()} # Calculate the value of a single step given the number of allowed # updates. single_steps = {k:...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def fit_predict(self, X, num_epochs=10, updates_epoch=10, stop_param_updates=dict(), batch_size=1, show_progressbar=False): """First fit, then predict."""
self.fit(X, num_epochs, updates_epoch, stop_param_updates, batch_size, show_progressbar) return self.predict(X, batch_size=batch_size)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def fit_transform(self, X, num_epochs=10, updates_epoch=10, stop_param_updates=dict(), batch_size=1, show_progressbar=False, show_epoch=False): """First fit, the...
self.fit(X, num_epochs, updates_epoch, stop_param_updates, batch_size, show_progressbar, show_epoch) return self.transform(X, batch_size=batch_size)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _update_params(self, constants): """Update params and return new influence."""
for k, v in constants.items(): self.params[k]['value'] *= v influence = self._calculate_influence(self.params['infl']['value']) return influence * self.params['lr']['value']
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _create_batches(self, X, batch_size, shuffle_data=True): """ Create batches out of a sequence of data. This function will append zeros to the end of your dat...
if shuffle_data: X = shuffle(X) if batch_size > X.shape[0]: batch_size = X.shape[0] max_x = int(np.ceil(X.shape[0] / batch_size)) X = np.resize(X, (max_x, batch_size, X.shape[-1])) return X
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _propagate(self, x, influences, **kwargs): """Propagate a single batch of examples through the network."""
activation, difference_x = self.forward(x) update = self.backward(difference_x, influences, activation) # If batch size is 1 we can leave out the call to mean. if update.shape[0] == 1: self.weights += update[0] else: self.weights += update.mean(0) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _check_input(self, X): """ Check the input for validity. Ensures that the input data, X, is a 2-dimensional matrix, and that the second dimension of this mat...
if np.ndim(X) == 1: X = np.reshape(X, (1, -1)) if X.ndim != 2: raise ValueError("Your data is not a 2D matrix. " "Actual size: {0}".format(X.shape)) if X.shape[1] != self.data_dimensionality: raise ValueError("Your data size != ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def transform(self, X, batch_size=100, show_progressbar=False): """ Transform input to a distance matrix by measuring the L2 distance. Parameters X : numpy array...
X = self._check_input(X) batched = self._create_batches(X, batch_size, shuffle_data=False) activations = [] prev = self._init_prev(batched) for x in tqdm(batched, disable=not show_progressbar): prev = self.forward(x, prev_activation=prev)[0] activation...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def predict(self, X, batch_size=1, show_progressbar=False): """ Predict the BMU for each input data. Parameters X : numpy array. The input data. batch_size : int...
dist = self.transform(X, batch_size, show_progressbar) res = dist.__getattribute__(self.argfunc)(1) return res
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def quantization_error(self, X, batch_size=1): """ Calculate the quantization error. Find the the minimum euclidean distance between the units and some input. Pa...
dist = self.transform(X, batch_size) res = dist.__getattribute__(self.valfunc)(1) return res
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def load(cls, path): """ Load a SOM from a JSON file saved with this package. Parameters path : str The path to the JSON file. Returns ------- s : cls A som of t...
data = json.load(open(path)) weights = data['weights'] weights = np.asarray(weights, dtype=np.float64) s = cls(data['num_neurons'], data['data_dimensionality'], data['params']['lr']['orig'], neighborhood=data['params']['infl']['orig'], ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def save(self, path): """Save a SOM to a JSON file."""
to_save = {} for x in self.param_names: attr = self.__getattribute__(x) if type(attr) == np.ndarray: attr = [[float(x) for x in row] for row in attr] elif isinstance(attr, types.FunctionType): attr = attr.__name__ to_save[x...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_authversion(job_args): """Get or infer the auth version. Based on the information found in the *AUTH_VERSION_MAP* the authentication version will be set ...
_version = job_args.get('os_auth_version') for version, variants in AUTH_VERSION_MAP.items(): if _version in variants: authversion = job_args['os_auth_version'] = version return authversion else: raise exceptions.AuthenticationProblem( "Auth Version must...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def get_headers(self): """Setup headers for authentication request."""
try: return { 'X-Auth-User': self.job_args['os_user'], 'X-Auth-Key': self.job_args['os_apikey'] } except KeyError as exp: raise exceptions.AuthenticationProblem( 'Missing Credentials. Error: %s', exp ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def auth_request(self, url, headers, body): """Perform auth request for token."""
return self.req.post(url, headers, body=body)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def parse_reqtype(self): """Return the authentication body."""
if self.job_args['os_auth_version'] == 'v1.0': return dict() else: setup = { 'username': self.job_args.get('os_user') } # Check if any prefix items are set. A prefix should be a # dictionary with keys matching the os_* crede...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def execute(): """This is the run section of the application Turbolift."""
if len(sys.argv) <= 1: raise SystemExit( 'No Arguments provided. use [--help] for more information.' ) # Capture user arguments _args = arguments.ArgumentParserator( arguments_dict=turbolift.ARGUMENTS, env_name='TURBO', epilog=turbolift.VINFO, t...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def write(self, log_file, msg): """ Append message to .log file """
try: with open(log_file, 'a') as LogFile: LogFile.write(msg + os.linesep) except: raise Exception('Error Configuring PyLogger.TextStorage Class.') return os.path.isfile(log_file)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def read(self, log_file): """ Read messages from .log file """
if os.path.isdir(os.path.dirname(log_file)) and os.path.isfile(log_file): with open(log_file, 'r') as LogFile: data = LogFile.readlines() data = "".join(line for line in data) else: data = '' return data
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def fit(self, X): """ Fit the scaler based on some data. Takes the columnwise mean and standard deviation of the entire input array. If the array has more than 2...
if X.ndim > 2: X = X.reshape((np.prod(X.shape[:-1]), X.shape[-1])) self.mean = X.mean(0) self.std = X.std(0) self.is_fit = True return self
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def transform(self, X): """Transform your data to zero mean unit variance."""
if not self.is_fit: raise ValueError("The scaler has not been fit yet.") return (X-self.mean) / (self.std + 10e-7)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def stupid_hack(most=10, wait=None): """Return a random time between 1 - 10 Seconds."""
# Stupid Hack For Public Cloud so it is not overwhelmed with API requests. if wait is not None: time.sleep(wait) else: time.sleep(random.randrange(1, most))
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def time_stamp(): """Setup time functions :returns: ``tuple`` """
# Time constants fmt = '%Y-%m-%dT%H:%M:%S.%f' date = datetime.datetime date_delta = datetime.timedelta now = datetime.datetime.utcnow() return fmt, date, date_delta, now
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def unique_list_dicts(dlist, key): """Return a list of dictionaries which are sorted for only unique entries. :param dlist: :param key: :return list: """
return list(dict((val[key], val) for val in dlist).values())
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def quoter(obj): """Return a Quoted URL. The quote function will return a URL encoded string. If there is an exception in the job which results in a "KeyError" t...
try: try: return urllib.quote(obj) except AttributeError: return urllib.parse.quote(obj) except KeyError: return obj
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def start(self): """Clone objects from one container to another. This method was built to clone a container between data-centers while using the same credentials...
LOG.info('Clone warm up...') # Create the target args self._target_auth() last_list_obj = None while True: self.indicator_options['msg'] = 'Gathering object list' with indicator.Spinner(**self.indicator_options): objects_list = self._lis...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def authenticate(job_args): """Authentication For Openstack API. Pulls the full Openstack Service Catalog Credentials are the Users API Username and Key/Password...
# Load any authentication plugins as needed job_args = utils.check_auth_plugin(job_args) # Set the auth version auth_version = utils.get_authversion(job_args=job_args) # Define the base headers that are used in all authentications auth_headers = { 'Content-Type': 'application/json', ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def getConfig(self, key): """ Get a Config Value """
if hasattr(self, key): return getattr(self, key) else: return False
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def addFilter(self, filter): """ Register Custom Filter """
self.FILTERS.append(filter) return "FILTER#{}".format(len(self.FILTERS) - 1)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def addAction(self, action): """ Register Custom Action """
self.ACTIONS.append(action) return "ACTION#{}".format(len(self.ACTIONS) - 1)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def removeFilter(self, filter): """ Remove Registered Filter """
filter = filter.split('#') del self.FILTERS[int(filter[1])] return True
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def removeAction(self, action): """ Remove Registered Action """
action = action.split('#') del self.ACTIONS[int(action[1])] return True
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def info(self, msg): """ Log Info Messages """
self._execActions('info', msg) msg = self._execFilters('info', msg) self._processMsg('info', msg) self._sendMsg('info', msg)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def warning(self, msg): """ Log Warning Messages """
self._execActions('warning', msg) msg = self._execFilters('warning', msg) self._processMsg('warning', msg) self._sendMsg('warning', msg)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def error(self, msg): """ Log Error Messages """
self._execActions('error', msg) msg = self._execFilters('error', msg) self._processMsg('error', msg) self._sendMsg('error', msg)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def critical(self, msg): """ Log Critical Messages """
self._execActions('critical', msg) msg = self._execFilters('critical', msg) self._processMsg('critical', msg) self._sendMsg('critical', msg)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def log(self, msg): """ Log Normal Messages """
self._execActions('log', msg) msg = self._execFilters('log', msg) self._processMsg('log', msg) self._sendMsg('log', msg)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _processMsg(self, type, msg): """ Process Debug Messages """
now = datetime.datetime.now() # Check If Path not provided if self.LOG_FILE_PATH == '': self.LOG_FILE_PATH = os.path.dirname(os.path.abspath(__file__)) + '/' # Build absolute Path log_file = self.LOG_FILE_PATH + now.strftime(self.LOG_FILE_FORMAT) + '.log' ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _configMailer(self): """ Config Mailer Class """
self._MAILER = Mailer(self.MAILER_HOST, self.MAILER_PORT) self._MAILER.login(self.MAILER_USER, self.MAILER_PWD)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _sendMsg(self, type, msg): """ Send Alert Message To Emails """
if self.ALERT_STATUS and type in self.ALERT_TYPES: self._configMailer() self._MAILER.send(self.MAILER_FROM, self.ALERT_EMAIL, self.ALERT_SUBJECT, msg)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _execFilters(self, type, msg): """ Execute Registered Filters """
for filter in self.FILTERS: msg = filter(type, msg) return msg
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _execActions(self, type, msg): """ Execute Registered Actions """
for action in self.ACTIONS: action(type, msg)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def auth_plugins(auth_plugins=None): """Authentication plugins. Usage, Add any plugin here that will serve as a rapid means to authenticate to an OpenStack envir...
__auth_plugins__ = { 'os_rax_auth': { 'os_auth_url': 'https://identity.api.rackspacecloud.com/v2.0/' 'tokens', 'os_prefix': { 'os_apikey': 'RAX-KSKEY:apiKeyCredentials', 'os_password': 'passwordCredentials' }, ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def check_basestring(item): """Return ``bol`` on string check item. :param item: Item to check if its a string :type item: ``str`` :returns: ``bol`` """
try: return isinstance(item, (basestring, unicode)) except NameError: return isinstance(item, str)
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def predict_distance(self, X, batch_size=1, show_progressbar=False): """Predict distances to some input data."""
X = self._check_input(X) X_shape = reduce(np.multiply, X.shape[:-1], 1) batched = self._create_batches(X, batch_size, shuffle_data=False) activations = [] activation = self._init_prev(batched) for x in tqdm(batched, disable=not show_progressbar): activat...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def generate(self, num_to_generate, starting_place): """Generate data based on some initial position."""
res = [] activ = starting_place[None, :] index = activ.__getattribute__(self.argfunc)(1) item = self.weights[index] for x in range(num_to_generate): activ = self.forward(item, prev_activation=activ)[0] index = activ.__getattribute__(self.argfunc)(1) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def forward(self, x, **kwargs): """ Perform a forward pass through the network. The forward pass in recursive som is based on a combination between the activatio...
prev = kwargs['prev_activation'] # Differences is the components of the weights subtracted from # the weight vector. distance_x, diff_x = self.distance_function(x, self.weights) distance_y, diff_y = self.distance_function(prev, self.context_weights) x_ = distance_x * s...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def load(cls, path): """ Load a recursive SOM from a JSON file. You can use this function to load weights of other SOMs. If there are no context weights, they wi...
data = json.load(open(path)) weights = data['weights'] weights = np.asarray(weights, dtype=np.float64) try: context_weights = data['context_weights'] context_weights = np.asarray(context_weights, dtype=np.float64) ...
<SYSTEM_TASK:> Solve the following problem using Python, implementing the functions described below, one line at a time <END_TASK> <USER_TASK:> Description: def _return_base_data(self, url, container, container_object=None, container_headers=None, object_headers=None): """Return headers and a parsed url. :param url: ...
headers = self.job_args['base_headers'] headers.update({'X-Auth-Token': self.job_args['os_token']}) _container_uri = url.geturl().rstrip('/') if container: _container_uri = '%s/%s' % ( _container_uri, cloud_utils.quoter(container) ) if ...