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Given the following text description, write Python code to implement the functionality described below step by step Description: H2O Tutorial Author Step1: Enable inline plotting in the Jupyter Notebook Step2: Intro to H2O Data Munging Read csv data into H2O. This loads the data into the H2O column compressed, in-me...
Python Code: import pandas as pd import numpy from numpy.random import choice from sklearn.datasets import load_boston import h2o h2o.init() # transfer the boston data from pandas to H2O boston_data = load_boston() X = pd.DataFrame(data=boston_data.data, columns=boston_data.feature_names) X["Median_value"] = boston_dat...
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Given the following text problem statement, write Python code to implement the functionality described below in problem statement Problem: Is there any way for me to preserve punctuation marks of !, ?, " and ' from my text documents using text CountVectorizer parameters in scikit-learn?
Problem: import numpy as np import pandas as pd from sklearn.feature_extraction.text import CountVectorizer text = load_data() vent = CountVectorizer(token_pattern=r"(?u)\b\w\w+\b|!|\?|\"|\'") transformed_text = vent.fit_transform([text])
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Given the following text description, write Python code to implement the functionality described below step by step Description: A full-fledged scraper Import our modules or packages that we will need to scrape a website, including requests and bs4 and csv Step1: Make a request to the webpage url that we are scraping...
Python Code: import requests from bs4 import BeautifulSoup import csv Explanation: A full-fledged scraper Import our modules or packages that we will need to scrape a website, including requests and bs4 and csv End of explanation r = requests.get('https://s3-us-west-2.amazonaws.com/nicar-2015/Weekly+Rankings+-+Weekend+...
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Given the following text description, write Python code to implement the functionality described below step by step Description: By deploying or using this software you agree to comply with the AI Hub Terms of Service and the Google APIs Terms of Service. To the extent of a direct conflict of terms, the AI Hub Terms o...
Python Code: PROJECT_ID = "[your-project-id]" #@param {type:"string"} ! gcloud config set project $PROJECT_ID Explanation: By deploying or using this software you agree to comply with the AI Hub Terms of Service and the Google APIs Terms of Service. To the extent of a direct conflict of terms, the AI Hub Terms of Servi...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Variable Coefficient Poisson Derive the form of a test variable-coefficient elliptic equation with periodic boundary conditions for testing the variable-coefficient multigrid solver. We want...
Python Code: %pylab inline from sympy import init_session init_session() alpha = 2.0 + cos(2*pi*x)*cos(2*pi*y) phi = sin(2*pi*x)*sin(2*pi*y) Explanation: Variable Coefficient Poisson Derive the form of a test variable-coefficient elliptic equation with periodic boundary conditions for testing the variable-coefficient m...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Tests overlaying rule 18 values on top of spacetime diagram Step1: Tests overlaying inferred states on top of rule 18 spacetime diagram
Python Code: overlay_test(rule_18.get_spacetime(),rule_18.get_spacetime(),t_max=20, x_max=20, text_color='red') overlay_test(rule_18.get_spacetime(),rule_18.get_spacetime(),t_max=20, x_max=20, colors=plt.cm.Set2, text_color='black') overlay_test(rule_18.get_spacetime(),rule_18.get_spacetime(),t_max=20, x_max=20, colorb...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Exercise from Think Stats, 2nd Edition (thinkstats2.com)<br> Allen Downey Read the female respondent file. Step1: Make a PMF of <tt>numkdhh</tt>, the number of children under 18 in the resp...
Python Code: %matplotlib inline import chap01soln resp = chap01soln.ReadFemResp() Explanation: Exercise from Think Stats, 2nd Edition (thinkstats2.com)<br> Allen Downey Read the female respondent file. End of explanation import thinkstats2 as ts children_PMF = ts.Pmf(resp.numkdhh) Explanation: Make a PMF of <tt>numkdhh...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Repairing artifacts with SSP This tutorial covers the basics of signal-space projection (SSP) and shows how SSP can be used for artifact repair; extended examples illustrate use of SSP for e...
Python Code: import os import numpy as np import matplotlib.pyplot as plt import mne from mne.preprocessing import (create_eog_epochs, create_ecg_epochs, compute_proj_ecg, compute_proj_eog) Explanation: Repairing artifacts with SSP This tutorial covers the basics of signal-space projectio...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Transient Fickian Diffusion The package OpenPNM allows for the simulation of many transport phenomena in porous media such as Stokes flow, Fickian diffusion, advection-diffusion, transport o...
Python Code: import numpy as np import openpnm as op %config InlineBackend.figure_formats = ['svg'] np.random.seed(10) %matplotlib inline np.set_printoptions(precision=5) Explanation: Transient Fickian Diffusion The package OpenPNM allows for the simulation of many transport phenomena in porous media such as Stokes flo...
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Given the following text description, write Python code to implement the functionality described below step by step Description: How to forecast time series in BigQuery ML This notebook accompanies the article How to do time series forecasting in BigQuery Install library and extensions if needed You don't need to do t...
Python Code: #!pip install google-cloud-bigquery %load_ext google.cloud.bigquery Explanation: How to forecast time series in BigQuery ML This notebook accompanies the article How to do time series forecasting in BigQuery Install library and extensions if needed You don't need to do this if you use AI Platform Notebooks...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Machine Learning Using Python by ARCC What is Machine Learning? Machine Learning is the subfield of computer science, which is defined by Arthur Samuel as "Giving computers the ability to le...
Python Code: #NumPy is the fundamental package for scientific computing with Python import numpy as np # Matplotlib is a Python 2D plotting library import matplotlib.pyplot as plt #Number of data points n=50 x=np.random.randn(n) y=np.random.randn(n) #Create a figure and a set of subplots fig, ax = plt.subplots() #Find...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Excercises Electric Machinery Fundamentals Chapter 1 Problem 1-18 Step1: Description Assume that the voltage applied to a load is $\vec{V} = 208\,V\angle -30^\circ$ and the current flowing ...
Python Code: %pylab notebook Explanation: Excercises Electric Machinery Fundamentals Chapter 1 Problem 1-18 End of explanation V = 208.0 * exp(-1j*30/180*pi) # [V] I = 2.0 * exp( 1j*20/180*pi) # [A] Explanation: Description Assume that the voltage applied to a load is $\vec{V} = 208\,V\angle -30^\circ$ and the curr...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Source alignment and coordinate frames The aim of this tutorial is to show how to visually assess that the data are well aligned in space for computing the forward solution, and understand t...
Python Code: import os.path as op import numpy as np from mayavi import mlab import mne from mne.datasets import sample print(__doc__) data_path = sample.data_path() subjects_dir = op.join(data_path, 'subjects') raw_fname = op.join(data_path, 'MEG', 'sample', 'sample_audvis_raw.fif') trans_fname = op.join(data_path, 'M...
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Given the following text description, write Python code to implement the functionality described below step by step Description: ES-DOC CMIP6 Model Properties - Ocean MIP Era Step1: Document Authors Set document authors Step2: Document Contributors Specify document contributors Step3: Document Publication Specify d...
Python Code: # DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'bnu', 'sandbox-1', 'ocean') Explanation: ES-DOC CMIP6 Model Properties - Ocean MIP Era: CMIP6 Institute: BNU Source ID: SANDBOX-1 Topic: Ocean Sub-Topics: Timestepping Framework, Adve...
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Given the following text description, write Python code to implement the functionality described below step by step Description: An IPython notebook that explores the relationship(correlation) between betweenness centrality and community membership of a number of mailing-lists in a given time period. Step1: The follo...
Python Code: %matplotlib inline from bigbang.archive import Archive import bigbang.parse as parse import bigbang.analysis.graph as graph import bigbang.ingress.mailman as mailman import bigbang.analysis.process as process import networkx as nx import matplotlib.pyplot as plt import pandas as pd from pprint import pprin...
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Given the following text description, write Python code to implement the functionality described below step by step Description: In TBtrans and TranSiesta one is capable of performing real space transport calculations by using real space self-energies (see here). Currently the real space self-energy calculation has to...
Python Code: graphene = sisl.geom.graphene(orthogonal=True) # Graphene tight-binding parameters on, nn = 0, -2.7 H_minimal = sisl.Hamiltonian(graphene) H_minimal.construct([[0.1, 1.44], [on, nn]]) Explanation: In TBtrans and TranSiesta one is capable of performing real space transport calculations by using real space s...
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Given the following text problem statement, write Python code to implement the functionality described below in problem statement Problem: How does one convert a left-tailed p-value to a z_score from the Z-distribution (standard normal distribution, Gaussian distribution)? I have yet to find the magical function in Sci...
Problem: import numpy as np import scipy.stats p_values = [0.1, 0.225, 0.5, 0.75, 0.925, 0.95] z_scores = scipy.stats.norm.ppf(p_values)
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Given the following text description, write Python code to implement the functionality described below step by step Description: <h1 align="center">TensorFlow Neural Network Lab</h1> <img src="image/notmnist.png"> In this lab, you'll use all the tools you learned from Introduction to TensorFlow to label images of Engl...
Python Code: import hashlib import os import pickle from urllib.request import urlretrieve import numpy as np from PIL import Image from sklearn.model_selection import train_test_split from sklearn.preprocessing import LabelBinarizer from sklearn.utils import resample from tqdm import tqdm from zipfile import ZipFile p...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Sample code to test features of 'NumPy', 'Matplotlib' and 'Scipy' Importing includes Step1: Testing variable assignment and operations in python Step2: Extra Step3: Simple Linear Regressi...
Python Code: %matplotlib inline %pylab inline from __future__ import print_function import matplotlib.pyplot as plt import matplotlib.animation as animation import theano import numpy as np from theano import tensor as T from numpy.linalg import inv Explanation: Sample code to test features of 'NumPy', 'Matplotlib' and...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Copyright Jana Schaich Borg/Attribution-NonCommercial 4.0 International (CC BY-NC 4.0) MySQL Exercise 3 Step1: 1. Use AS to change the titles of the columns in your output The AS clause all...
Python Code: %load_ext sql %sql mysql://studentuser:studentpw@mysqlserver/dognitiondb %sql USE dognitiondb %config SqlMagic.displaylimit=25 Explanation: Copyright Jana Schaich Borg/Attribution-NonCommercial 4.0 International (CC BY-NC 4.0) MySQL Exercise 3: Formatting Selected Data In this lesson, we are going to learn...
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Given the following text description, write Python code to implement the functionality described below step by step Description: A Network Tour of Data Science, EPFL 2016 Project Step1: Load the data from *.csv file The first step is to load the data from the .csv file. <br> The format of the csv line is<br> class{0...
Python Code: import random import numpy as np import tensorflow as tf import matplotlib.pyplot as plt import csv import scipy.misc import time import collections import os import utils as ut import importlib import copy importlib.reload(ut) # This is a bit of magic to make matplotlib figures appear inline in the notebo...
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Given the following text description, write Python code to implement the functionality described below step by step Description: SAM Registry Hive Handle Request Metadata | | | | Step1: Download & Process Mordor Dataset Step2: Analytic I Monitor for any handle requested for the SAM registry hive...
Python Code: from openhunt.mordorutils import * spark = get_spark() Explanation: SAM Registry Hive Handle Request Metadata | | | |:------------------|:---| | collaborators | ['@Cyb3rWard0g', '@Cyb3rPandaH'] | | creation date | 2019/07/25 | | modification date | 2020/09/20 | | playbook relat...
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Given the following text description, write Python code to implement the functionality described below step by step Description: dataset We generate a dataset, y and a sub-sampled version y_sub Step1: Regularisation We wish to solve problems that involve the term
Python Code: # pull a dataset and make it 1D for now url='https://upload.wikimedia.org/wikipedia/en/0/04/TCF_centre.jpg' im = np.array(Image.open(urllib.request.urlopen(url)).convert("L")).astype(float) # y = im/im.max() plt.imshow(y,cmap='gray') plt.colorbar() # sub-sample # how many samples to mask? nmask = int(y.si...
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Given the following text description, write Python code to implement the functionality described below step by step Description: This is functionally similar to the the other notebook. All the operations here have been vectorized. This results in much much faster code, but is also much unreadable. The vectorization al...
Python Code: import numpy as np Explanation: This is functionally similar to the the other notebook. All the operations here have been vectorized. This results in much much faster code, but is also much unreadable. The vectorization also necessitated the replacement of the Gauss-Seidel smoother with under-relaxed Jacob...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Step1: Nikola Static site generator Features It’s just a bunch of HTML files and assets. Incremental builds/rebuild using doit, so Nikola is fast. Multilingual Extensible Friendly CLI Multip...
Python Code: from nbconvert.exporters import HTMLExporter ... def _compile_string(self, nb_json): Export notebooks as HTML strings. self._req_missing_ipynb() c = Config(self.site.config['IPYNB_CONFIG']) c.update(get_default_jupyter_config()) exportHtml = HTMLExporter(config=c) body, _ = exportHt...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Chapter 1 Introduction Step1: History
Python Code: show_image('fig1_5.png', figsize=[12, 10]) show_image('fig1_4.png', figsize=[10, 8]) Explanation: Chapter 1 Introduction End of explanation show_image('fig1_11.png', figsize=[10, 8]) Explanation: History: distributed representation back-propagation long short-term memory (LSTM) network: used for many seque...
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Given the following text description, write Python code to implement the functionality described below step by step Description: =============================================================== Model selection with Probabilistic PCA and Factor Analysis (FA) ==============================================================...
Python Code: # Authors: Alexandre Gramfort # Denis A. Engemann # License: BSD 3 clause import numpy as np import matplotlib.pyplot as plt from scipy import linalg from sklearn.decomposition import PCA, FactorAnalysis from sklearn.covariance import ShrunkCovariance, LedoitWolf from sklearn.model_selection impor...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Analysing PPG signals from smart rings There's a range of Smart Rings that recently hit the market. Among other things they also record PPG signals on the finger, so let's dive into how to a...
Python Code: #Let's import some packages first import numpy as np import matplotlib.pyplot as plt import heartpy as hp sample_rate = 32 #load the example file data = hp.get_data('ring_data.csv') Explanation: Analysing PPG signals from smart rings There's a range of Smart Rings that recently hit the market. Among other ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Target Connectivity Configurable logging system All LISA modules have been updated to use a more consistent logging which can be configured using a single configuraton file Step1: Each modu...
Python Code: !head -n12 $LISA_HOME/logging.conf Explanation: Target Connectivity Configurable logging system All LISA modules have been updated to use a more consistent logging which can be configured using a single configuraton file: End of explanation !head -n30 $LISA_HOME/logging.conf | tail -n5 Explanation: Each mo...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Introduction This tutorial shows how to use Google Cloud Platform technologies to work with structured healthcare data to build a predictive model. Synthea Synthea is a data generator that s...
Python Code: from google.colab import auth auth.authenticate_user() credentials = auth._check_adc() print(credentials) Explanation: Introduction This tutorial shows how to use Google Cloud Platform technologies to work with structured healthcare data to build a predictive model. Synthea Synthea is a data generator that...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Taylor approximations to color conversion This notebook shows how to come up with all these magic constants that appear in the approximations to LinearRgb in my go-colorful library in order ...
Python Code: %matplotlib inline %config InlineBackend.figure_format = 'retina' import matplotlib as mpl import matplotlib.pyplot as plt plt.style.use('ggplot') import numpy as np from sympy import * init_printing() Explanation: Taylor approximations to color conversion This notebook shows how to come up with all these ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: <table style="width Step1: Use debugging tools throughout! Don't forget all the fun debugging tools we covered while you work on these exercises. %debug %pdb import q;q.d() And (if necessa...
Python Code: %matplotlib inline from __future__ import print_function import os import pandas as pd import matplotlib.pyplot as plt import seaborn as sns PROJ_ROOT = os.path.join(os.pardir, os.pardir) Explanation: <table style="width:100%; border: 0px solid black;"> <tr style="width: 100%; border: 0px solid black;"...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Using the C/C++ API This notebook shows how to use the OpenMC C/C++ API through the openmc.lib module. This module is particularly useful for multiphysics coupling because it allows you to u...
Python Code: %matplotlib inline import openmc import openmc.lib Explanation: Using the C/C++ API This notebook shows how to use the OpenMC C/C++ API through the openmc.lib module. This module is particularly useful for multiphysics coupling because it allows you to update the density of materials and the temperatures o...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Data exploration To start with, let us load the dataframe, summarize the columns, and plot a sactter matrix of the data to check for e.g. missing values, non-linear scaling, etc.. Step1: Sc...
Python Code: import pandas as pd # Sample code number: id number # Clump Thickness: 1 - 10 # 3. Uniformity of Cell Size: 1 - 10 # 4. Uniformity of Cell Shape: 1 - 10 # 5. Marginal Adhesion: 1 - 10 # 6. Single Epithelial Cell Size: 1 - 10 # 7. Bare Nuclei: 1 - 10 # 8. Bland Chromatin: 1 - 10 # 9. Normal Nucleoli: 1 ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: What is the True Normal Human Body Temperature? Background The mean normal body temperature was held to be 37$^{\circ}$C or 98.6$^{\circ}$F for more than 120 years since it was first concept...
Python Code: import pandas as pd df = pd.read_csv('data/human_body_temperature.csv') # Your work here. # Load Matplotlib + Seaborn and SciPy libraries import matplotlib.pyplot as plt import seaborn as sns import numpy as np from scipy import stats %matplotlib inline df.head(5) Explanation: What is the True Normal Human...
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Given the following text description, write Python code to implement the functionality described below step by step Description: <h1>2b. Machine Learning using tf.estimator </h1> In this notebook, we will create a machine learning model using tf.estimator and evaluate its performance. The dataset is rather small (770...
Python Code: !sudo chown -R jupyter:jupyter /home/jupyter/training-data-analyst # Ensure the right version of Tensorflow is installed. !pip freeze | grep tensorflow==2.6 import tensorflow as tf import pandas as pd import numpy as np import shutil print(tf.__version__) Explanation: <h1>2b. Machine Learning using tf.esti...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Geotransforms May-June, 2018, Mauro Alberti Last version Step1: Forward and backward transformation examples Step2: calculating the X, Y geographic coordinate arrays
Python Code: from pygsf.geometries.grids.geotransform import * gt1 = GeoTransform(1500, 3000, 10, 10) gt1 Explanation: Geotransforms May-June, 2018, Mauro Alberti Last version: 2021-04-24 Last running version: 2021-04-24 1. Examples End of explanation ijPixToxyGeogr(gt1, 0, 0) xyGeogrToijPix(gt1, 1500, 3000) ijPixToxyG...
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Given the following text description, write Python code to implement the functionality described below step by step Description: ES-DOC CMIP6 Model Properties - Landice MIP Era Step1: Document Authors Set document authors Step2: Document Contributors Specify document contributors Step3: Document Publication Specify...
Python Code: # DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'ncar', 'sandbox-3', 'landice') Explanation: ES-DOC CMIP6 Model Properties - Landice MIP Era: CMIP6 Institute: NCAR Source ID: SANDBOX-3 Topic: Landice Sub-Topics: Glaciers, Ice. Prop...
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Given the following text description, write Python code to implement the functionality described below step by step Description: <h1> Homework 2 </h1> Matt Buchovecky Astro 283 Step1: Set of measurements $\left{Y_{k}\right}$ at known locations $\left{X_{k}\right}$ Gaussian uncertainty $\sigma=1.0$ $p=30\%$ chance of ...
Python Code: from scipy import random, optimize, std from matplotlib import pyplot %matplotlib inline import numpy import csv Explanation: <h1> Homework 2 </h1> Matt Buchovecky Astro 283 End of explanation sigma_meas = 1.0 # standard deviation of measurements p_err = 0.30 # probability of experimental mistake occurri...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Brief look at Cartopy Cartopy is a Python package that provides easy creation of maps with matplotlib. Cartopy vs Basemap Cartopy is better integrated with matplotlib and in a more active de...
Python Code: import matplotlib.pyplot as plt %matplotlib inline Explanation: Brief look at Cartopy Cartopy is a Python package that provides easy creation of maps with matplotlib. Cartopy vs Basemap Cartopy is better integrated with matplotlib and in a more active development state Proper handling of datelines in carto...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Step2: Optimization problems, objective functions and optimization benchmarks TODO Step3: Type of optimization problems continuous vs discrete problems (possibly combinatorial if the set of...
Python Code: %matplotlib inline import numpy as np import matplotlib matplotlib.rcParams['figure.figsize'] = (8, 8) import math import matplotlib.pyplot as plt import matplotlib.colors as colors from mpl_toolkits.mplot3d import axes3d from matplotlib import cm import scipy.optimize def plot_2d_contour_solution_space(fu...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Trying MountainCar Step1: Let's try some arbitrary thetas And see what the ratio depends on. I've seen above that it's probably not the order of the Fourier FA, but the number of dimensions...
Python Code: mc_env = gym.make("MountainCar-v0") mc_n_weights, mc_feature_vec = fourier_fa.make_feature_vec( np.array([mc_env.low, mc_env.high]), n_acts=3, order=2) mc_experience = linfa.init(lmbda=0.9, ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Introduction to NumPy numpy is a powerful set of tools to perform mathematical operations of on lists of numbers. It works faster than normal python lists operations and can manupilate high ...
Python Code: import numpy as np Explanation: Introduction to NumPy numpy is a powerful set of tools to perform mathematical operations of on lists of numbers. It works faster than normal python lists operations and can manupilate high dimentional arrays too. Additional material: * Another tutorial * Numpy Reference Imp...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Introduction NetworKit provides an easy interface to Gephi that uses the Gephi graph streaming plugin. To be able to use it, install the Graph Streaming plugin using the Gephi plugin manager...
Python Code: G = generators.ErdosRenyiGenerator(300, 0.2).generate() G.addEdge(0, 1) #We want to make sure this specific edge exists, for usage in an example later. Explanation: Introduction NetworKit provides an easy interface to Gephi that uses the Gephi graph streaming plugin. To be able to use it, install the Graph...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Copyright 2020 The TensorFlow Authors. Step1: Writing a training loop from scratch <table class="tfo-notebook-buttons" align="left"> <td> <a target="_blank" href="https Step2: Introd...
Python Code: #@title Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # dist...
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Given the following text description, write Python code to implement the functionality described below step by step Description: 1A.data - Décorrélation de variables aléatoires On construit des variables corrélées gaussiennes et on cherche à construire des variables décorrélées en utilisant le calcul matriciel. Step1:...
Python Code: from jyquickhelper import add_notebook_menu add_notebook_menu() Explanation: 1A.data - Décorrélation de variables aléatoires On construit des variables corrélées gaussiennes et on cherche à construire des variables décorrélées en utilisant le calcul matriciel. End of explanation import random import numpy ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Intoduction to Pandas and Dataframes <hr> Venkat Malladi (Computational Biologist BICF) Agenda <hr> Introduction to Pandas DataSeries Exercise 1 Exercise 2 Dataframe Exercise 3 Exercise 4 E...
Python Code: # Import Pandas and Numpy import pandas as pd import numpy as np Explanation: Intoduction to Pandas and Dataframes <hr> Venkat Malladi (Computational Biologist BICF) Agenda <hr> Introduction to Pandas DataSeries Exercise 1 Exercise 2 Dataframe Exercise 3 Exercise 4 Exercise 5 Import and Store Data Summari...
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Given the following text description, write Python code to implement the functionality described below step by step Description: &larr; Back to Index Jupyter Basics You are looking at a Jupyter Notebook, an interactive Python shell inside of a web browser. With it, you can run individual Python commands and immediatel...
Python Code: 1+2 Explanation: &larr; Back to Index Jupyter Basics You are looking at a Jupyter Notebook, an interactive Python shell inside of a web browser. With it, you can run individual Python commands and immediately view their output. It's basically like the Matlab Desktop or Mathematica Notebook but for Python....
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Given the following text description, write Python code to implement the functionality described below step by step Description: Load station data based on NetCDF files In this example we show how to load station data based on NetCDF files. The data is loaded with the pymepps package. Thanks to Ingo Lange we could use...
Python Code: import pymepps import matplotlib.pyplot as plt Explanation: Load station data based on NetCDF files In this example we show how to load station data based on NetCDF files. The data is loaded with the pymepps package. Thanks to Ingo Lange we could use original data from the Wettermast for this example. In t...
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Given the following text description, write Python code to implement the functionality described below step by step Description: AMPLPY Step1: Google Colab & Kaggle interagration Step2: Use %%ampl_eval to pass the model to AMPL Step3: Set data Step4: Use %%ampl_eval to display values Step5: Use amplpy to retrive ...
Python Code: !pip install -q amplpy ampltools Explanation: AMPLPY: Jupyter Notebook Integration Documentation: http://amplpy.readthedocs.io GitHub Repository: https://github.com/ampl/amplpy PyPI Repository: https://pypi.python.org/pypi/amplpy Jupyter Notebooks: https://github.com/ampl/amplpy/tree/master/notebooks Setup...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Create an auto transform to scale numeric columns automatically. Step1: Create an XGBoost classifier and run 5-fold cross validation on the data.
Python Code: df["target"] = df["target"] - 1 t_auto = auto.Auto_transform(exclude=["target"]) df2 = t_auto.fit_transform(df) df2.head() Explanation: Create an auto transform to scale numeric columns automatically. End of explanation from seldon import xgb import seldon.pipeline.cross_validation as cf xgb = xgb.XGBoostC...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Convergence on low-rank manifolds Ivan Oseledets Skolkovo Institute of Science and Technology Based on joint work with C. Lubich, H. Walach, D. Kolesnikov The topic of this talk Recently, mu...
Python Code: #2d case functions def grad(A, x, x0): #u, s, v = x #u0, s0, v0 = x0 #u_new = np.linalg.qr(np.hstack((u, u0)))[0] #v_new = np.linalg.qr(np.hstack((v, v0)))[0] #s_new = u_new.T.dot(u).dot(s).dot(v.T.dot(v_new)) - u_new.T.dot(u0).dot(s0).dot(v0.T.dot(v_new)) return x0 - A.dot(full(x)....
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Given the following text problem statement, write Python code to implement the functionality described below in problem statement Problem: The function below generate_desc() implements this behavior and generates a textual description given a trained model, and a given prepared photo as input.
Python Code:: # map an integer to a word def word_for_id(integer, tokenizer): for word, index in tokenizer.word_index.items(): if index == integer: return word return None # generate a description for an image def generate_desc(model, tokenizer, photo, max_length): # seed the generation process in_text = 'star...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Building a neural network with TensorFlow In this module we are going to build a neural network for regression. Regression is the prediction of a real-valued number given some inputs. Step1:...
Python Code: import tensorflow as tf import numpy as np import matplotlib.pyplot as plt %matplotlib inline Explanation: Building a neural network with TensorFlow In this module we are going to build a neural network for regression. Regression is the prediction of a real-valued number given some inputs. End of explanati...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Data management in the ocean, weather and climate sciences If you use this lesson in a bootcamp or workshop, please let me know (irving.damien (at) gmail.com). I'd love to keep track of whe...
Python Code: from netCDF4 import Dataset acorn_URL = 'http://thredds.aodn.org.au/thredds/dodsC/IMOS/eMII/demos/ACORN/monthly_gridded_1h-avg-current-map_non-QC/TURQ/2012/IMOS_ACORN_V_20121001T000000Z_TURQ_FV00_monthly-1-hour-avg_END-20121029T180000Z_C-20121030T160000Z.nc.gz' acorn_DATA = Dataset(acorn_URL) Explanation:...
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Given the following text description, write Python code to implement the functionality described. Description: Print any pair of integers with sum of GCD and LCM equals to N Function to print the required pair ; Print the pair ; Driver code
Python Code: def printPair(n ) : print("1", end = "▁ ") print(n - 1 )  n = 14 printPair(n )
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Given the following text description, write Python code to implement the functionality described below step by step Description: Storage of Network Data and Topology Step1: Spreadsheet Analogy The best analogy for explaining data storage in OpenPNM is the humble spreadsheet. According to this analogy, each pore (or ...
Python Code: import openpnm as op %config InlineBackend.figure_formats = ['svg'] import numpy as np np.random.seed(0) Explanation: Storage of Network Data and Topology End of explanation pn = op.network.Cubic(shape=[4, 1, 1]) geo = op.geometry.SpheresAndCylinders(network=pn, pores=pn.Ps, throats=pn.Ts) Explanation: Spr...
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Given the following text problem statement, write Python code to implement the functionality described below in problem statement Problem: I am trying to modify a DataFrame df to only contain rows for which the values in the column closing_price are not between 99 and 101 and trying to do this with the code below.
Problem: import pandas as pd import numpy as np np.random.seed(2) df = pd.DataFrame({'closing_price': np.random.randint(95, 105, 10)}) def g(df): return df.query('closing_price < 99 or closing_price > 101') result = g(df.copy())
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Given the following text description, write Python code to implement the functionality described below step by step Description: Copyright 2020 The TensorFlow Authors. Step1: こんにちは、多くの世界 <table class="tfo-notebook-buttons" align="left"> <td><a target="_blank" href="https Step2: TensorFlow Quantum をインストールします。 Step3...
Python Code: #@title Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # dist...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Using MySQLdb mySQLdb - Library has to be pip'ed' before and now to be imported Step1: Database Connection Properties and Connect to the database Step12: Let's create a sample table and i...
Python Code: import MySQLdb Explanation: Using MySQLdb mySQLdb - Library has to be pip'ed' before and now to be imported End of explanation #Enter the values for you database connection dsn_database = "verein" # e.g. "MySQLdbtest" dsn_hostname = "localhost" # e.g.: "mydbinstance.xyz.us-east-1.rds.amazonaws.com...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Step1: Gc graph imports "article_neg/pos/neu1.gml" - saves "nodes_df_negative/positive/neutral.csv" - node labels, degrees, and centralities for entire network - saves "Gc_negative/posit...
Python Code: # 1_network_df import networkx as nx import numpy as np import pandas as pd import matplotlib.pyplot as plt %matplotlib inline import os from glob import glob plt.style.use('ggplot') pd.set_option('display.width', 5000) pd.set_option('display.max_columns', 60) #gml_files = glob('../output/network/article_...
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Given the following text description, write Python code to implement the functionality described below step by step Description: PyEarthScience Step1: Add cyclic data. Set minimum and maximum contour values although the interval. Step2: Open a workstation, here x11 window. Step3: Set resources. Step4: Draw the plo...
Python Code: import Ngl,Nio #-- define variables fname = "/Users/k204045/NCL/general/data/new_data/rectilinear_grid_2D.nc" #-- data file name #-- open file and read variables f = Nio.open_file(fname,"r") #-- open data file temp = f.variables["tsurf"][0,::-1,:] #-- first time step, reverse la...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Training a convolutional neural network on the MNIST data. The original code in script form is here. Step1: Neural Network Settings Here are most of the settings that describe the neural ne...
Python Code: # Import some stuff from __future__ import print_function, absolute_import, division import numpy as np np.random.seed(1337) # for reproducibility from keras.datasets import mnist from keras.models import Sequential from keras.layers import Dense, Dropout, Activation, Flatten from keras.layers import Conv...
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Given the following text description, write Python code to implement the functionality described below step by step Description: LAB04 Step1: Load taxifare dataset The Taxi Fare dataset for this lab is 106,545 rows and has been pre-processed and split for use in this lab. Note that the dataset is the same as used in...
Python Code: import datetime import logging import os import matplotlib.pyplot as plt import numpy as np import tensorflow as tf from tensorflow import feature_column as fc from tensorflow.keras import layers from tensorflow.keras import models # set TF error log verbosity logging.getLogger("tensorflow").setLevel(loggi...
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Given the following text description, write Python code to implement the functionality described below step by step Description: BigQuery Query To View Create a BigQuery view. License Copyright 2020 Google LLC, Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in complian...
Python Code: !pip install git+https://github.com/google/starthinker Explanation: BigQuery Query To View Create a BigQuery view. License Copyright 2020 Google LLC, Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Exploring the Twitter trends API In this notebook we'll take a quick look at the section of the Twitter Rest API that deals with trending terms Step1: Basic calls The first call trends/avai...
Python Code: from collections import Counter import os from pprint import pprint import tweepy c_key = os.environ['CONSUMER_KEY'] c_secret = os.environ['CONSUMER_SECRET'] a_token = os.environ['ACCESS_TOKEN'] a_token_secret = os.environ['ACCESS_TOKEN_SECRET'] auth = tweepy.OAuthHandler(c_key, c_secret) auth.set_access_t...
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Given the following text description, write Python code to implement the functionality described below step by step Description: NEST implementation of the aeif models Hans Ekkehard Plesser and Tanguy Fardet, 2016-09-09 This notebook provides a reference solution for the Adaptive Exponential Integrate and Fire (AEIF) ...
Python Code: # Install assimulo package in the current Jupyter kernel import sys !{sys.executable} -m pip install assimulo import numpy as np from scipy.integrate import odeint import matplotlib.pyplot as plt %matplotlib inline plt.rcParams['figure.figsize'] = (15, 6) Explanation: NEST implementation of the aeif models...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Step1: Correlation In this section we will develop a measure of how tightly clustered a scatter diagram is about a straight line. Formally, this is called measuring linear association. The c...
Python Code: z = np.random.normal(0, 1, 500) def r_scatter(xs, r): Generate y-values for a scatter plot with correlation approximately r return r*xs + (np.sqrt(1-r**2))*z corr_opts = { 'aspect_ratio': 1, 'xlim': (-3.5, 3.5), 'ylim': (-3.5, 3.5), } nbi.scatter(np.random.normal(size=500), r_...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Introduction to Python and Natural Language Technologies Lecture 01, Introduction to Python September 6, 2017 About this part of the course Goal upper intermediate level Python will cover so...
Python Code: print("Hello world") Explanation: Introduction to Python and Natural Language Technologies Lecture 01, Introduction to Python September 6, 2017 About this part of the course Goal upper intermediate level Python will cover some advanced concepts focus on string manipulation Prerequisites intermediate level ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: 1) With "Lil Wayne" and "Lil Kim" there are a lot of "Lil" musicians. Do a search and print a list of 50 that are playable in the USA (or the country of your choice), along with their popula...
Python Code: import requests response = requests.get('https://api.spotify.com/v1/search?query=artist:lil&type=artist&market=us&limit=50') data = response.json() artists = data['artists']['items'] for artist in artists: print(artist['name'], artist['popularity']) Explanation: 1) With "Lil Wayne" and "Lil Kim" there ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: When I first ran this, my dataframes weren't "aligned". So it's very important to check your datasets after every load. The correspondence between dates and topics and numerical features is ...
Python Code: print(len(dates)) print(len(topics)) print(len(nums)) sum(nums.index == dates.index) == len(dates) sum(nums.index == topics.index) == len(dates) disc = LinearDiscriminantAnalysis() disc category = (np.ceil(nums.favorite_count ** .13)).astype(np.int8) disc = LinearDiscriminantAnalysis().fit(topics, category...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Getting Started with Batfish This notebook uses pybatfish, a Python-based SDK for Batfish, to analyze a sample network. It shows how to submit your configurations and other network data for ...
Python Code: # Import packages %run startup.py bf = Session(host="localhost") Explanation: Getting Started with Batfish This notebook uses pybatfish, a Python-based SDK for Batfish, to analyze a sample network. It shows how to submit your configurations and other network data for analysis and how to query its vendor-ne...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Transport a collection of particles Step1: Optimization - Step 1 Step2: Optimization - Step 2 Step3: Optimization - Step 3 Step4: Optimization - Step 4
Python Code: def grid_of_particles(N, w): # Create a grid of N evenly spaced particles # covering a square patch of width and height w # centered on the region 0 < x < 2, 0 < y < 1 x = np.linspace(1.0-w/2, 1.0+w/2, int(np.sqrt(N))) y = np.linspace(0.5-w/2, 0.5+w/2, int(np.sqrt(N))) x, y = np.m...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Names Step2: 1. Python Return Statements 1.1 Functions Without Returns Thus far we've not paid much attention to function return statements. As many of you have noticed, you don't HAVE to h...
Python Code: from numpy import * Explanation: Names: [Insert Your Names Here] Lab 5 - Return Statements and Plotting Basics Lab 5 Contents Python Return Statements Functions Without Returns Return Statements as Code Breaks Return Statements for Assigned Output Basic Python Plotting End of explanation def dummy_func(x=0...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Getting started with The Joker The Joker (pronounced Yo-kurr) is a highly specialized Monte Carlo (MC) sampler that is designed to generate converged posterior samplings for Keplerian orbita...
Python Code: import astropy.table as at from astropy.time import Time import astropy.units as u from astropy.visualization.units import quantity_support import matplotlib.pyplot as plt import numpy as np %matplotlib inline import thejoker as tj # set up a random generator to ensure reproducibility rnd = np.random.defau...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Multiple Hypothesis Testing! aka "Plenty of P-Values" by Zane Blanton #### Data Scientist in Marketplace at trivago Standard Hypothesis Testing We set an $\alpha$ (False Error Rate) of 0.05....
Python Code: total_null = 500 total_alt = 500 rejected_null = total_null * 0.05 rejected_alt = total_alt * 0.95 hypothesis_df = pd.DataFrame({'null hypotheses': [total_null, total_null - rejected_null, 0], 'rejected nulls': [0, rejected_null, rejected_null], 'alt hypo...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Conditional Probability Activity & Exercise Below is some code to create some fake data on how much stuff people purchase given their age range. It generates 100,000 random "people" and rand...
Python Code: from numpy import random random.seed(0) totals = {20:0, 30:0, 40:0, 50:0, 60:0, 70:0} purchases = {20:0, 30:0, 40:0, 50:0, 60:0, 70:0} totalPurchases = 0 for _ in range(100000): ageDecade = random.choice([20, 30, 40, 50, 60, 70]) purchaseProbability = float(ageDecade) / 100.0 totals[ageDecade] ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: ABU量化系统使用文档 <center> <img src="./image/abu_logo.png" alt="" style="vertical-align Step1: 之前的章节无论讲解策略优化,还是针对回测进行滑点或是手续费都是针对一支股票进行择时操作。 本节将示例讲解多支股票进行择时策略的实现,依然使用AbuFactorBuyBreak做为买入策...
Python Code: from __future__ import print_function from __future__ import division import warnings warnings.filterwarnings('ignore') warnings.simplefilter('ignore') import numpy as np import pandas as pd import matplotlib.pyplot as plt %matplotlib inline import os import sys # 使用insert 0即只使用github,避免交叉使用了pip安装的abupy,导致...
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Given the following text description, write Python code to implement the functionality described below step by step Description: 1. Load train and test data Step1: 2. Tokenize name into (surname, title, first name and maiden name) Step2: 2.1 Extract features from Title variable Step3: It seems we can extract some i...
Python Code: train = pd.read_csv("data/train.csv") train["dataset"] = "train" train.head() test = pd.read_csv("data/test.csv") test["dataset"] = "test" test.head() #Combine both datasets to predict families train = train.append(test) train.set_index(train["PassengerId"],inplace=True) Explanation: 1. Load train and test...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Explore LarterBreakspear model. Run time Step1: Perform the simulation Step2: Plot pretty pictures of what we just did
Python Code: # Third party python libraries import numpy # Try and import from "The Virtual Brain" from tvb.simulator.lab import * from tvb.datatypes.time_series import TimeSeriesRegion import tvb.analyzers.fmri_balloon as bold from tvb.simulator.plot import timeseries_interactive as timeseries_interactive Explanation:...
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Given the following text problem statement, write Python code to implement the functionality described below in problem statement Problem: I have the following dataframe:
Problem: import pandas as pd df = pd.DataFrame({'text': ['abc', 'def', 'ghi', 'jkl']}) def g(df): return pd.DataFrame({'text': [', '.join(df['text'].str.strip('"').tolist())]}) result = g(df.copy())
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Given the following text description, write Python code to implement the functionality described below step by step Description: Copyright 2020 The TensorFlow IO Authors. Step1: 音频数据准备和增强 <table class="tfo-notebook-buttons" align="left"> <td><a target="_blank" href="https Step2: 使用方法 读取音频文件 在 TensorFlow IO 中,利用类 t...
Python Code: #@title Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # dist...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Kampff lab - Polytrode Impedance Here a description of the dataset Step1: create a DataIO (and remove if already exists) Step2: CatalogueConstructor Make catalogue on the first 280. After ...
Python Code: # suposing the datset is downloaded here # workdir = '/media/samuel/dataspikesorting/DataSpikeSortingHD2/kampff/polytrode Impedance/' workdir = '/home/samuel/Documents/projet/DataSpikeSorting/kampff/polytrode Impedance/' # Input file filename = workdir + 'amplifier2017-02-02T17_18_46/amplifier2017-02-02T17...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Naive Bayes and Bayes Classifiers author Step1: Simple Gaussian Example Step2: The data seems like it comes from two normal distributions, with the cyan class being more prevalent than the...
Python Code: %matplotlib inline import matplotlib.pyplot as plt import seaborn; seaborn.set_style('whitegrid') import numpy from pomegranate import * numpy.random.seed(0) numpy.set_printoptions(suppress=True) %load_ext watermark %watermark -m -n -p numpy,scipy,pomegranate Explanation: Naive Bayes and Bayes Classifiers ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Solution to a problem posted at https Step1: Roll six 6-sided dice Step2: Count how many times each outcome occurs and score accordingly Step3: Run many times and accumulate scores Step4:...
Python Code: from __future__ import print_function, division from numpy.random import choice from collections import Counter from collections import defaultdict Explanation: Solution to a problem posted at https://www.reddit.com/r/statistics/comments/4csjee/finding_pab_given_two_sets_of_data/ Copyright 2016 Allen Downe...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Energy Efficiency What can you tell me about the data? Step1: X2, X3, X4 might be candidates for normalization; X5, X6, X8 likely to be discrete values; Y1, Y2 within the same range Step2:...
Python Code: import matplotlib.pyplot as plt %matplotlib inline import pandas as pd df = pd.read_csv('../data/energy/energy.csv') df.shape df.describe() Explanation: Energy Efficiency What can you tell me about the data? End of explanation import matplotlib.pyplot as plt %matplotlib inline from pandas.tools.plotting im...
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Given the following text description, write Python code to implement the functionality described below step by step Description: First, I made a mistake naming the data set! It's 2015 data, not 2014 data. But yes, still use 311-2014.csv. You can rename it. Importing and preparing your data Import your data, but only t...
Python Code: df = pd.read_csv('311-2015.csv', dtype = str) df.head() import datetime def created_date_to_datetime(date_str): return datetime.datetime.strptime(date_str, '%m/%d/%Y %I:%M:%S %p') df['created_datetime'] = df['Created Date'].apply(created_date_to_datetime) df = df.set_index('created_datetime') Explanati...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Simulating a Yo-Yo Modeling and Simulation in Python Copyright 2021 Allen Downey License Step1: Yo-yo Suppose you are holding a yo-yo with a length of string wound around its axle, and you ...
Python Code: # install Pint if necessary try: import pint except ImportError: !pip install pint # download modsim.py if necessary from os.path import exists filename = 'modsim.py' if not exists(filename): from urllib.request import urlretrieve url = 'https://raw.githubusercontent.com/AllenDowney/ModSim/...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Sentinel-2 Cloud Masking with s2cloudless Author Step1: Assemble cloud mask components This section builds an S2 SR collection and defines functions to add cloud and cloud shadow component ...
Python Code: import ee # Trigger the authentication flow. ee.Authenticate() # Initialize the library. ee.Initialize() Explanation: Sentinel-2 Cloud Masking with s2cloudless Author: jdbcode This tutorial is an introduction to masking clouds and cloud shadows in Sentinel-2 (S2) surface reflectance (SR) data using Earth E...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Planet Analytics API Tutorial Summary Statistics Step1: 2. Post a stats job request a) Check API Connection Note Step2: b) Select your subscription The analytics stats API enables you to c...
Python Code: !pip install --quiet hvplot Explanation: Planet Analytics API Tutorial Summary Statistics: Buildings Overview Introduction Post a stats job request Get job report results Visualize the time series Customize area of interest and time range 1. Introduction This notebook demonstrates how to request road summa...
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Given the following text description, write Python code to implement the functionality described below step by step Description: &larr; Back to Index Zero Crossing Rate The zero crossing rate indicates the number of times that a signal crosses the horizontal axis. Let's load a signal Step1: Listen to the signal Step2...
Python Code: x, sr = librosa.load('audio/simple_loop.wav') Explanation: &larr; Back to Index Zero Crossing Rate The zero crossing rate indicates the number of times that a signal crosses the horizontal axis. Let's load a signal: End of explanation ipd.Audio(x, rate=sr) Explanation: Listen to the signal: End of explanat...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Outline IPython and IPython Notebooks Numpy Pandas Python and IPython python is a programming language and also the name of the program that runs scripts written in that language. If you're ...
Python Code: # you don't have to rename numpy to np but it's customary to do so import numpy as np # you can create a 1-d array with a list of numbers a = np.array([1, 4, 6]) print 'a:' print a print 'a.shape:', a.shape print # you can create a 2-d array with a list of lists of numbers b = np.array([[6, 7], [3, 1], [4...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Bokeh <a href="https Step1: Plot lines Source Step2: Scatter plot Source Step3: Squares Step4: Hex Tiles Bokeh can plot hexagonal tiles, which are often used for showing binned aggregati...
Python Code: import bokeh from bokeh.plotting import figure, output_notebook, show Explanation: Bokeh <a href="https://colab.research.google.com/github/jdhp-docs/notebooks/blob/master/python_bokeh_en.ipynb"><img align="left" src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Colab" title="Open ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: PolyFill Step1: Methods Geometry methods Step2: Methods to add vertices and edges to table Step3: Main Script Set initial vertices Step4: Force-directed graph
Python Code: from IPython.core.display import HTML from string import Template import pandas as pd import random, math HTML('<script src="lib/d3/d3.min.js"></script>') Explanation: PolyFill: Example of D3 in Jupyter This example shows the combined use of Python and D3 for a randomized 2D space-filling algorithm and vis...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Matplotlib Below are some code from the code source Data Science from Scratch Step1: Bar Chart Step2: Histogram A bar chart can also be a good choice for plotting histograms of bucketed nu...
Python Code: from matplotlib import pyplot as plt import matplotlib.pyplot as plt from collections import Counter %matplotlib inline years = [1950, 1960, 1970, 1980, 1990, 2000, 2010] gdp = [300.2, 543.3, 1075.9, 2862.5, 5979.6, 10289.7, 14958.3] # create a line chart, years on x-axis, gdp on y-axis plt.plot(years, gd...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Background In this notebook, we show how to feed the embeddings from the language model into the MLP classifier. Then, we take the github repo, kubernetes/kubernetes, as an example. We do tr...
Python Code: import pandas as pd combined_sig_df = pd.read_pickle('combined_sig_df.pkl') feat_df = pd.read_csv('feat_df.csv') # github issue contents combined_sig_df.head(3) # embeddings of github issues [mean, max] feat_df.head(3) # count the labels in the holdout set from collections import Counter c = Counter() for ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: We will try to learn from data using a very simple example of tossing a coin. We will first generate some data (30% heads and 70% tails) and will try to learn the CPD of the coin using Maxim...
Python Code: # Generate data import numpy as np import pandas as pd raw_data = np.array([0] * 30 + [1] * 70) # Representing heads by 0 and tails by 1 data = pd.DataFrame(raw_data, columns=['coin']) print(data) # Defining the Bayesian Model from pgmpy.models import BayesianModel from pgmpy.estimators import MaximumLikel...
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Given the following text description, write Python code to implement the functionality described below step by step Description: In this notebook a simple Q learner will be trained and evaluated. The Q learner recommends when to buy or sell shares of one particular stock, and in which quantity (in fact it determines t...
Python Code: # Basic imports import os import pandas as pd import matplotlib.pyplot as plt import numpy as np import datetime as dt import scipy.optimize as spo import sys from time import time from sklearn.metrics import r2_score, median_absolute_error from multiprocessing import Pool %matplotlib inline %pylab inline ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: DAT-ATX-1 Capstone Project Nikolaos Vergos, February 2016 &#110;&#118;&#101;&#114;&#103;&#111;&#115;&#64;&#103;&#109;&#97;&#105;&#108;&#46;&#99;&#111;&#109; 1. Data Preparation & Exploratory...
Python Code: import warnings warnings.filterwarnings('ignore') import pandas as pd import numpy as np import matplotlib.pyplot as plt import seaborn as sns %matplotlib inline from scipy import stats # For correlation coefficient calculation Explanation: DAT-ATX-1 Capstone Project Nikolaos Vergos, February 2016 &#110;&#...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Mock community quality control This notebook maps observed mock community sequences, which are technically from unknown organisms, to "trueish" taxonomies, i.e., the most likely taxonomic ma...
Python Code: from tax_credit import mock_quality from os.path import expandvars, join Explanation: Mock community quality control This notebook maps observed mock community sequences, which are technically from unknown organisms, to "trueish" taxonomies, i.e., the most likely taxonomic match given a list of expected se...