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Given the following text description, write Python code to implement the functionality described below step by step Description: Psuedo Weight Pruning and Clustering 2017-05-10 Model In this post, we use a trained AlexNet model (training on ImageNet dataset). AlexNet has 8 parameterized layers Step1: The shape of eac...
Python Code: import numpy as np import os import sys weights_path = '/'.join(os.getcwd().split('/')[:-1]) + '/local-trained/alexnet/weights/' print(weights_path) os.listdir(weights_path) keys = ['conv1', 'conv2', 'conv3', 'conv4', 'conv5', 'fc6', 'fc7', 'fc8'] weights = {} for k in keys: weights[k] = np.load(weight...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Long-Short Equity Strategies By Delaney Granizo-Mackenzie Part of the Quantopian Lecture Series Step1: Now that we have factor values and returns, we can see what would happen if we ranked ...
Python Code: import numpy as np import pandas as pd import matplotlib.pyplot as plt # We'll generate a random factor current_factor_values = np.random.normal(0, 1, 10000) equity_names = ['Equity ' + str(x) for x in range(10000)] # Put it into a dataframe factor_data = pd.Series(current_factor_values, index = equity_nam...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Save this file as studentid1_studentid2_lab#.ipynb (Your student-id is the number shown on your student card.) E.g. if you work with 3 people, the notebook should be named Step1: Lab 1 Step...
Python Code: NAME = "Michelle Appel" NAME2 = "Verna Dankers" NAME3 = "Yves van Montfort" EMAIL = "michelle.appel@student.uva.nl" EMAIL2 = "verna.dankers@student.uva.nl" EMAIL3 = "yves.vanmontfort@student.uva.nl" Explanation: Save this file as studentid1_studentid2_lab#.ipynb (Your student-id is the number shown on your...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Converting a Non-Deterministic <span style="font-variant Step1: In order to transform a non-deterministic <span style="font-variant Step2: The function $\delta^$ maps a state into a set o...
Python Code: def epsClosure(s, delta): Result = { s } while True: NewStates = { p for q in Result for p in delta.get((q, ''), set()) } if NewStates <= Result: return frozenset(Result) Result |= NewStates Explanation: Converting a N...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Usage reference guide for haystack-reverse this is an example of every haystack-reverse commands. The zeus.vmem.856.dump is there https Step1: First we need to generate the analysis for the...
Python Code: !haystack-reverse --help Explanation: Usage reference guide for haystack-reverse this is an example of every haystack-reverse commands. The zeus.vmem.856.dump is there https://dl.dropboxusercontent.com/u/10222931/HAYSTACK/zeus.vmem.856.dump.tgz It was extracted from pid 856 from the zeus.img image from htt...
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Given the following text description, write Python code to implement the functionality described below step by step Description: MAT245 Lab 10 Multi-Layer Perceptrons Structure & Flow of Information Multi-layer perceptrons (MLPs) are a simple class of neural networks. It's easiest to understand how an MLP works by exa...
Python Code: import numpy as np import matplotlib.pyplot as plt from scipy.special import expit from sklearn import datasets, mixture xs = np.linspace(-5, 5) fig = plt.figure(figsize=(20, 5)) ## Plot relu ax1 = fig.add_subplot(1, 3, 1) ax1.plot(xs, np.maximum(0, xs)) ## Plot sigmoid ax2 = fig.add_subplot(1, 3, 2) ax2....
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Given the following text description, write Python code to implement the functionality described below step by step Description: Copyright 2019 The TensorFlow Authors. Step1: カスタムフェデレーテッドアルゴリズム、パート 1 Step2: フェデレーテッドデータ TFF の際立った特徴の 1 つは、フェデレーテッドデータに関する TensorFlow ベースの計算をコンパクトに表現できることです。本チュートリアルで使用するフェデレーテッドデータという用語は...
Python Code: #@title Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # dist...
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Given the following text description, write Python code to implement the functionality described below step by step Description: K-fold cross validation - Regression Model Based on the Ludwig regression example Data set This example demonstrates teh following Step1: Contstants Step2: Clean out previous results Ste...
Python Code: import logging import os import os.path import shutil import tempfile import matplotlib.pyplot as plt import numpy as np import pandas as pd import requests import scipy.stats as stats import seaborn as sns from sklearn.model_selection import train_test_split from ludwig.api import kfold_cross_validate, Lu...
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Given the following text description, write Python code to implement the functionality described below step by step Description: ES-DOC CMIP6 Model Properties - Atmoschem MIP Era Step1: Document Authors Set document authors Step2: Document Contributors Specify document contributors Step3: Document Publication Speci...
Python Code: # DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'nuist', 'sandbox-3', 'atmoschem') Explanation: ES-DOC CMIP6 Model Properties - Atmoschem MIP Era: CMIP6 Institute: NUIST Source ID: SANDBOX-3 Topic: Atmoschem Sub-Topics: Transport, E...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Hubs Step1: Exercise Can you create a ranked list of the importance of each individual, based on the number of neighbors they have? Hint Step2: If you inspect the dictionary closely, you ...
Python Code: # Let's find out the number of neighbors that individual #7 has. G.neighbors(7) Explanation: Hubs: How do we evaluate the importance of some individuals in a network? Within a social network, there will be certain individuals which perform certain important functions. For example, there may be hyper-connec...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Copyright 2020 The TensorFlow Hub Authors. Step1: <table class="tfo-notebook-buttons" align="left"> <td> <a target="_blank" href="https Step2: You will use the AdamW optimizer from t...
Python Code: #@title Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # dist...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Working with the pyCNN package The pyCNN package is intended for neural-network processing on the CPU, and is particularly suited for NLP applications. It is a python-wrapper for the CNN pac...
Python Code: # create a model and add the parameters. m = Model() m.add_parameters("W", (8,2)) m.add_parameters("V", (1,8)) m.add_parameters("b", (8)) renew_cg() # new computation graph. not strictly needed here, but good practice. # associate the parameters with cg Expressions W = parameter(m["W"]) V = parameter(m["V"...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Bienvenid@s a otra reunión de Pyladies!! En esta sesión aprenderemos a crear nuestras propias funciones en python.Pero primero que son funciones? Una función en python es un bloque de código...
Python Code: animales = ['perro', 'gato', 'perico'] len(animales) animales[1] x = 4 type(int('43')) Explanation: Bienvenid@s a otra reunión de Pyladies!! En esta sesión aprenderemos a crear nuestras propias funciones en python.Pero primero que son funciones? Una función en python es un bloque de código organizado y reu...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Supervised Learning In-Depth Step1: Motivating Random Forests Step2: The binary splitting makes this extremely efficient. As always, though, the trick is to ask the right questions. This i...
Python Code: %matplotlib inline import numpy as np import matplotlib.pyplot as plt from scipy import stats Explanation: Supervised Learning In-Depth: Random Forests Previously we saw a powerful discriminative classifier, Support Vector Machines. Here we'll take a look at motivating another powerful algorithm. This one ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Dimuon spectrum <hr style="border-top-width Step1: A little extra Step2: Convert to ROOT format and analyse First of all we convert the csv file into ROOT format, i.e. filling up a TTree d...
Python Code: import ROOT Explanation: Dimuon spectrum <hr style="border-top-width: 4px; border-top-color: #34609b;"> This ROOTbook produces a plot of the dimuon spectrum starting from a subset of the CMS collision events of Run2010B. Dataset Reference:<br> McCauley, T. (2014). Dimuon event information derived from the...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Project Step1: <a id='wrangling'></a> Data Wrangling General Properties Step3: Data Cleaning As evident from the data, it seems we have cast of the movie as string separated by | symbol. T...
Python Code: # import necessary libraries %matplotlib inline import matplotlib.pyplot as plt import pandas as pd import numpy as np import seaborn as sns Explanation: Project: Investigate TMDb Movie Data Table of Contents <ul> <li><a href="#intro">Introduction</a></li> <li><a href="#wrangling">Data Wrangling</a></li> <...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Bootstrap replicates in other words repeating the same experiment for a given number of times. Step1: For further experiments Sepal Length variable will be used. Additionally, we will focus...
Python Code: # importing required modules import pandas as pd import seaborn as sns import matplotlib.pyplot as plt %matplotlib inline import numpy as np # runing the functions script %run stats_func.py # loading the iris dataset df = pd.read_csv('iris.csv') df.head() # extracting sepal length and sepal width for furth...
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Given the following text description, write Python code to implement the functionality described below step by step Description: More solving the problem with some code before I write the code. This post is a continuation on solving a problem before writing the code. Defining the problem. 2 objects I want to understan...
Python Code: import logging from pprint import pprint from itertools import chain from datetime import datetime Explanation: More solving the problem with some code before I write the code. This post is a continuation on solving a problem before writing the code. Defining the problem. 2 objects I want to understand are...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Multiple Kernel Learning By Saurabh Mahindre - <a href="https Step1: Introduction <em>Multiple kernel learning</em> (MKL) is about using a combined kernel i.e. a kernel consisting of a line...
Python Code: %pylab inline %matplotlib inline import os SHOGUN_DATA_DIR=os.getenv('SHOGUN_DATA_DIR', '../../../data') # import all shogun classes from shogun import * Explanation: Multiple Kernel Learning By Saurabh Mahindre - <a href="https://github.com/Saurabh7">github.com/Saurabh7</a> This notebook is about multiple...
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Given the following text description, write Python code to implement the functionality described below step by step Description: ES-DOC CMIP6 Model Properties - Land MIP Era Step1: Document Authors Set document authors Step2: Document Contributors Specify document contributors Step3: Document Publication Specify do...
Python Code: # DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'nasa-giss', 'giss-e2-1g', 'land') Explanation: ES-DOC CMIP6 Model Properties - Land MIP Era: CMIP6 Institute: NASA-GISS Source ID: GISS-E2-1G Topic: Land Sub-Topics: Soil, Snow, Veget...
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Given the following text description, write Python code to implement the functionality described below step by step Description: SciPy 2016 Scikit-learn Tutorial Unsupervised Learning Part 1 -- Transformation Many instances of unsupervised learning, such as dimensionality reduction, manifold learning, and feature extr...
Python Code: ary = np.array([1, 2, 3, 4, 5]) ary_standardized = (ary - ary.mean()) / ary.std() ary_standardized Explanation: SciPy 2016 Scikit-learn Tutorial Unsupervised Learning Part 1 -- Transformation Many instances of unsupervised learning, such as dimensionality reduction, manifold learning, and feature extractio...
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Given the following text description, write Python code to implement the functionality described below step by step Description: BigQuery basics BigQuery is a petabyte-scale analytics data warehouse that you can use to run SQL queries over vast amounts of data in near realtime. This page shows you how to get started w...
Python Code: import pandas from google.cloud import bigquery Explanation: BigQuery basics BigQuery is a petabyte-scale analytics data warehouse that you can use to run SQL queries over vast amounts of data in near realtime. This page shows you how to get started with the Google BigQuery API using the Python client libr...
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Given the following text problem statement, write Python code to implement the functionality described below in problem statement Problem: I have many duplicate records - some of them have a bank account. I want to keep the records with a bank account.
Problem: import pandas as pd import numpy as np df = pd.DataFrame({'firstname': ['foo Bar', 'Bar Bar', 'Foo Bar'], 'lastname': ['Foo Bar', 'Bar', 'Foo Bar'], 'email': ['Foo bar', 'Bar', 'Foo Bar'], 'bank': [np.nan, 'abc', 'xyz']}) def g(df): uniq_indx = (df.s...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Notebook for preprocessing NYT op-ed data Goal Step1: 1. Read in the Data Step2: This dataset has 11,648 op-eds from the NY Times. We have additional information for each article (title, a...
Python Code: import pandas as pd import numpy as np import nltk from nltk.tokenize import RegexpTokenizer from nltk.corpus import stopwords from nltk.stem.snowball import SnowballStemmer from nltk.stem.wordnet import WordNetLemmatizer from sklearn.feature_extraction.text import CountVectorizer Explanation: Notebook for...
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Given the following text description, write Python code to implement the functionality described below step by step Description: The Step1: Step2: Now, we can create an Step3: Epochs behave similarly to Step4: You can select subsets of epochs by indexing the Step5: It is also possible to iterate through Ste...
Python Code: import mne import os.path as op import numpy as np from matplotlib import pyplot as plt Explanation: The :class:Epochs &lt;mne.Epochs&gt; data structure: epoched data :class:Epochs &lt;mne.Epochs&gt; objects are a way of representing continuous data as a collection of time-locked trials, stored in an array...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Introduction to ML Deployment Deploying models created using python in a Turi Predictive Service is very easy. This notebook walks you through the step-by-step process. <img src='images/pre...
Python Code: # In order to run this code, you need an already trianed model (see the accompanying notebook) import graphlab as gl model = gl.load_model('pattern_mining_model.gl') model Explanation: Introduction to ML Deployment Deploying models created using python in a Turi Predictive Service is very easy. This notebo...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Model summary Run done with model with three convolutional layers, two fully connected layers and a final softmax layer, with a constant of 48 channels per convolutional layer. Initially run...
Python Code: print('## Model structure summary\n') print(model) params = model.get_params() n_params = {p.name : p.get_value().size for p in params} total_params = sum(n_params.values()) print('\n## Number of parameters\n') print(' ' + '\n '.join(['{0} : {1} ({2:.1f}%)'.format(k, v, 100.*v/total_params) ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Factorial HMM Example synthetic data Step1: Test out learned distribution inside of SMC We'll compare it against a baseline of "bootstrap" SMC, which proposes from the transition dynamics o...
Python Code: devices = factorial_hmm.gen_devices() T = 50 np.random.seed(20) X, Y = factorial_hmm.gen_dataset(devices, T) plt.figure(figsize=(15,3.5)) plt.plot(Y) plt.figure(figsize=(15,10)) plt.imshow((X*devices).T, interpolation='None', aspect=1); plt.yticks(np.arange(len(devices)), devices); print len(devices), 2**l...
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Given the following text description, write Python code to implement the functionality described below step by step Description: <h1> Text Classification using TensorFlow/Keras on Cloud ML Engine </h1> This notebook illustrates Step2: We will look at the titles of articles and figure out whether the article came from...
Python Code: # change these to try this notebook out BUCKET = 'cloud-training-demos-ml' PROJECT = 'cloud-training-demos' REGION = 'us-central1' import os os.environ['BUCKET'] = BUCKET os.environ['PROJECT'] = PROJECT os.environ['REGION'] = REGION os.environ['TFVERSION'] = '1.14' import tensorflow as tf print(tf.__versio...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Ejemplo de word2vec con gensim En la siguiente celda, importamos las librerías necesarias y configuramos los mensajes de los logs. Step1: Entrenamiento de un modelo Implemento una clase Cor...
Python Code: import gensim, logging, os logging.basicConfig(format='%(asctime)s : %(levelname)s : %(message)s', level=logging.INFO) Explanation: Ejemplo de word2vec con gensim En la siguiente celda, importamos las librerías necesarias y configuramos los mensajes de los logs. End of explanation class Corpus(object): ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Step1: Visualizing High-Performance Gradient Boosting with XGBoost and Yellowbrick In this post we'll explore how to evaluate the performance of a gradient boosting classifier from the xgboo...
Python Code: %matplotlib inline import os import requests import pandas as pd import matplotlib.pyplot as plt from xgboost.sklearn import XGBClassifier from sklearn.model_selection import train_test_split as tts from yellowbrick.classifier import ClassBalance, ROCAUC, ClassificationReport, ClassPredictionError def down...
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Given the following text description, write Python code to implement the functionality described below step by step Description: ES-DOC CMIP6 Model Properties - Landice MIP Era Step1: Document Authors Set document authors Step2: Document Contributors Specify document contributors Step3: Document Publication Specify...
Python Code: # DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'uhh', 'sandbox-3', 'landice') Explanation: ES-DOC CMIP6 Model Properties - Landice MIP Era: CMIP6 Institute: UHH Source ID: SANDBOX-3 Topic: Landice Sub-Topics: Glaciers, Ice. Proper...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Theory and Practice of Visualization Exercise 2 Imports Step1: Violations of graphical excellence and integrity Find a data-focused visualization on one of the following websites that is a ...
Python Code: from IPython.display import Image Explanation: Theory and Practice of Visualization Exercise 2 Imports End of explanation # Add your filename and uncomment the following line: Image(filename='graph2.JPG') Explanation: Violations of graphical excellence and integrity Find a data-focused visualization on one...
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Given the following text description, write Python code to implement the functionality described below step by step Description: We see above that there is a entry called "TOTAL". That obvisously cannot be a name. We would need to remove that from the dataset. Before we do, let's confirm it is what it the name suggest...
Python Code: print "print out some values of the observation 'TOTAL'" for name, person in data_dict.iteritems(): if name == 'TOTAL': print person salary = [] for name, person in data_dict.iteritems(): if float(person['salary']) > 0: salary.append(float(person['salary'])) print "the sum of salary of all ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: <h1>Table of Contents<span class="tocSkip"></span></h1> <div class="toc"><ul class="toc-item"><li><span><a href="#Triggers" data-toc-modified-id="Triggers-1"><span class="toc-item-num">1&nbs...
Python Code: from random import randrange from myhdlpeek import * setup(use_wavedrom=True, use_jupyter=True) def create_random_trace(name, num_bits, num_samples): trace = Trace() trace.name = name trace.num_bits = num_bits for i in range(num_samples): trace.append(Sample(i, randrange(0,2**num_bi...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Data Prep Load in cleaned experiment data, generated from this notebook. Step1: Grab the min and max submission dates for filtering main_summary. Step2: Load in main_summary, filtered to t...
Python Code: S3_PATH = "s3://net-mozaws-prod-us-west-2-pipeline-analysis/taarv2/cleaned_data/" # Select essential columns. clean_data = sqlContext.read.parquet(S3_PATH).select('client_id', 'locale', 'branch', 'submission_date_s3') # Display number of rows per branch. clean_data.groupBy('branch').count().collect() Expla...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Copyright 2018 The TensorFlow Authors. Licensed under the Apache License, Version 2.0 (the "License"). Text Generation using a RNN <table class="tfo-notebook-buttons" align="left"><td> <a ta...
Python Code: !pip install unidecode Explanation: Copyright 2018 The TensorFlow Authors. Licensed under the Apache License, Version 2.0 (the "License"). Text Generation using a RNN <table class="tfo-notebook-buttons" align="left"><td> <a target="_blank" href="https://colab.research.google.com/github/tensorflow/tensorfl...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Contents This notebook analyses lag-frequency spectrums of the light curves simulated through impulse response approach. First, a simple case with delta impulse response is covered. Subseque...
Python Code: import numpy as np from matplotlib import pyplot as plt %matplotlib inline Explanation: Contents This notebook analyses lag-frequency spectrums of the light curves simulated through impulse response approach. First, a simple case with delta impulse response is covered. Subsequently, an energy-dependent imp...
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Given the following text description, write Python code to implement the functionality described below step by step Description: First off, an acknowledgement of the usefulness of the Software Carpentry materials, and particularly data, in preparing this session - this course is not, however, affiliated with or endors...
Python Code: with open('data/inflammation-01.csv', 'r') as f: snippet = f.readlines()[:3] print(*snippet) Explanation: First off, an acknowledgement of the usefulness of the Software Carpentry materials, and particularly data, in preparing this session - this course is not, however, affiliated with or endorsed by t...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Part-of-Speech Tagging using NLTK One task in NLP has been to reliably identify a word's part of speech. This can help us with the ever-present task of identifying content words, but can be ...
Python Code: import nltk from nltk import word_tokenize sentence = "For me it has to do with the work that gets done at the crossroads of \ digital media and traditional humanistic study. And that happens in two different ways. \ On the one hand, it's bringing the tools and techniques of digital media to bear \ on trad...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Copyright 2020 The TensorFlow Authors. Step1: 고급 자동 미분 <table class="tfo-notebook-buttons" align="left"> <td><a target="_blank" href="https Step2: 그래디언트 기록 제어하기 자동 미분 가이드에서는 그래디언트 계산을 빌드...
Python Code: #@title Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # dist...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Quicksort Summary | Performance | Complexity | |-----------------------------|------------------| |Worst-case | $O(n^2)$ | |Best-case ...
Python Code: def partition(lst, start, end): # in this formulation, the pivot point is the first item pivot = lst[start] # start partitioning after the pivot point first = start + 1 last = end # keep going until we covered the entire list while first <= last: # find the next element...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Python design patterns Covering only a small portion of what exists. import this creating main functions Take a look at this guide Step1: Explicit is better than implicit Step2: Simple is ...
Python Code: import this as t print(t) Explanation: Python design patterns Covering only a small portion of what exists. import this creating main functions Take a look at this guide: http://docs.python-guide.org/en/latest/writing/style/ Take a look at this "Zen of Python" by example: http://artifex.org/~hblanks/talks/...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Algorithms Exercise 1 Imports Step3: Word counting Write a function tokenize that takes a string of English text returns a list of words. It should also remove stop words, which are common ...
Python Code: %matplotlib inline from matplotlib import pyplot as plt import numpy as np Explanation: Algorithms Exercise 1 Imports End of explanation things = "hello!" def ispuct(char, punctuation='`~!@#$%^&*()_-+={[}]|\:;"<,>.?/}\t'): return (not (char in punctuation)) #x = list(filter(ispuct, things)) #a = '' #a....
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Given the following text description, write Python code to implement the functionality described below step by step Description: ES-DOC CMIP6 Model Properties - Ocean MIP Era Step1: Document Authors Set document authors Step2: Document Contributors Specify document contributors Step3: Document Publication Specify d...
Python Code: # DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'cnrm-cerfacs', 'cnrm-esm2-1', 'ocean') Explanation: ES-DOC CMIP6 Model Properties - Ocean MIP Era: CMIP6 Institute: CNRM-CERFACS Source ID: CNRM-ESM2-1 Topic: Ocean Sub-Topics: Timest...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Initial Value Problems A paper by Jones and Underwood suggests a model for the temperature behaviour $T(t)$ of a PV cell in terms of a nonlinear differential equation. Here we extract the ke...
Python Code: from __future__ import division import numpy %matplotlib notebook from matplotlib import pyplot parameters = { "T_ambient" : 290.0, "c1" : 1.0e-5, "c2" : 0.9, "c3" : 0.0, "c4" : 1.0e-2, "c5" : 1.0} T_initial = 300.0 t_end = 1e-2 def...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Step1: Language Translation In this project, you’re going to take a peek into the realm of neural network machine translation. You’ll be training a sequence to sequence model on a dataset o...
Python Code: DON'T MODIFY ANYTHING IN THIS CELL import helper import problem_unittests as tests source_path = 'data/small_vocab_en' target_path = 'data/small_vocab_fr' source_text = helper.load_data(source_path) target_text = helper.load_data(target_path) #target_text Explanation: Language Translation In this project, ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Class 07 ML Models Step1: We'll import the DecisionTreeClassifier and use all of the default values except for the random_state. We'll provide that so that the output is consistent run-to-r...
Python Code: import pandas as pd import matplotlib.pyplot as plt import seaborn as sns sns.set_style("white") #Note the new use of the dtype option here. We can directly tell pandas to use the Speed column as a category in one step. speeddf = pd.read_csv("../Class04/Class04_speed_data.csv",dtype={'Speed':'category'}) #...
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Given the following text description, write Python code to implement the functionality described below step by step Description: <b>Question 3 Is there any difference in app quality for free apps with in-app purchases?</b> Step1: <p>First, the data set is splitted into two parts, one is app without in-app purchases a...
Python Code: data_q3['is_InAppPurcased'].value_counts() free = data_q3.loc[data_q3['is_InAppPurcased'] == 0] paid = data_q3.loc[data_q3['is_InAppPurcased'] == 1] free['current_rating'].plot(kind = "density") paid['current_rating'].plot(kind = "density") plt.xlabel('Current Rating') plt.legend(labels = ['free','paid'], ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Gaussian Mixture Models (GMM) KDE centers each bin (or kernel rather) at each point. In a mixture model we don't use a kernel for each data point, but rather we fit for the locations of the...
Python Code: from IPython.display import YouTubeVideo YouTubeVideo("B36fzChfyGU") Explanation: Gaussian Mixture Models (GMM) KDE centers each bin (or kernel rather) at each point. In a mixture model we don't use a kernel for each data point, but rather we fit for the locations of the kernels--in addition to the width....
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Given the following text description, write Python code to implement the functionality described below step by step Description: Instacart This workbook about feature generation The generated fetaures are stored as csv files, so can be loaded from subseqent pages TODO Combine the feature generation for train and test....
Python Code: import numpy as np import pandas as pd import time from tqdm import tqdm import gc print('loading prior') priors = pd.read_csv('./data/order_products__prior.csv') print('loading train') train_all = pd.read_csv('./data/order_products__train.csv') ## Have split the trian data into two sets, train and eval ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Sentiment analysis with TFLearn In this notebook, we'll continue Andrew Trask's work by building a network for sentiment analysis on the movie review data. Instead of a network written with ...
Python Code: import pandas as pd import numpy as np import tensorflow as tf import tflearn from tflearn.data_utils import to_categorical Explanation: Sentiment analysis with TFLearn In this notebook, we'll continue Andrew Trask's work by building a network for sentiment analysis on the movie review data. Instead of a n...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Machine Learning Complications Author Step1: Now we plot a single example of both classes, to show what the data looks like. First the pulsar example. Step2: It is clear that the peak is n...
Python Code: # Import the libraries to be used throughout. %pylab inline import matplotlib.pyplot as plt # The HTRU 2 profile data is split - one file containing the real pulsar # profiles, one file containing noise/interference profiles. We load both # these data sources here. First we construct relative paths to the ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: ES-DOC CMIP6 Model Properties - Atmos MIP Era Step1: Document Authors Set document authors Step2: Document Contributors Specify document contributors Step3: Document Publication Specify d...
Python Code: # DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'ipsl', 'sandbox-2', 'atmos') Explanation: ES-DOC CMIP6 Model Properties - Atmos MIP Era: CMIP6 Institute: IPSL Source ID: SANDBOX-2 Topic: Atmos Sub-Topics: Dynamical Core, Radiation,...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Section 5.6 Superposition in space, land strip sudden change same at both ends IHE, Delft, transient groundwater @T.N.Olsthoorn, 2019-01-02 Context The 1D aquifer has a limited width equal t...
Python Code: import numpy as np import matplotlib.pyplot as plt from scipy.special import erfc Explanation: Section 5.6 Superposition in space, land strip sudden change same at both ends IHE, Delft, transient groundwater @T.N.Olsthoorn, 2019-01-02 Context The 1D aquifer has a limited width equal to $L$. The head at $x=...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Gaussian Naive Bayes Classification For most classification problems, it’s nice to have a simple, fast method to provide a quick baseline classification. If the simple and fast method is suf...
Python Code: from sklearn.datasets import load_digits digits = load_digits() from sklearn.naive_bayes import GaussianNB from sklearn.model_selection import train_test_split X_train, X_test, y_train, y_test = train_test_split(digits.data, digits.target) print(len(X_train), len(X_test), y_train, y_test) clf = GaussianNB(...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Home Depot Product Search Relevance The challenge is to predict a relevance score for the provided combinations of search terms and products. To create the ground truth labels, Home Depot ha...
Python Code: import graphlab as gl from nltk.stem import * Explanation: Home Depot Product Search Relevance The challenge is to predict a relevance score for the provided combinations of search terms and products. To create the ground truth labels, Home Depot has crowdsourced the search/product pairs to multiple human ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: TBtrans is capable of calculating transport in $N\ge 1$ electrode systems. In this example we will explore a 4-terminal graphene GNR cross-bar (one zGNR, the other aGNR) system. Step1: Crea...
Python Code: graphene = sisl.geom.graphene(orthogonal=True) R = [0.1, 1.43] hop = [0., -2.7] Explanation: TBtrans is capable of calculating transport in $N\ge 1$ electrode systems. In this example we will explore a 4-terminal graphene GNR cross-bar (one zGNR, the other aGNR) system. End of explanation elec_y = graphene...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Create an interactive TFX pipeline This notebook is the first of two notebooks that guide you through automating the Real-time Item-to-item Recommendation with BigQuery ML Matrix Factorizati...
Python Code: %load_ext autoreload %autoreload 2 !pip install -U -q tfx Explanation: Create an interactive TFX pipeline This notebook is the first of two notebooks that guide you through automating the Real-time Item-to-item Recommendation with BigQuery ML Matrix Factorization and ScaNN solution with a pipeline. Use thi...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Iris introduction course 1. The Iris Cube Learning Outcome Step1: 1.1 Introduction to the Iris Cube<a id='intro_to_iris_cube'></a> The top level object in Iris is called a Cube. A Cube cont...
Python Code: import iris Explanation: Iris introduction course 1. The Iris Cube Learning Outcome: by the end of this section, you will be able to explain the capabilities and functionality of Iris Cubes and Coordinates. Duration: 1 hour Overview:<br> 1.1 Introduction to the Iris Cube<br> 1.2 Working with a Cube<br> 1.3...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Displaying text on a PmodOLED This demonstration shows how to display text on a PmodOLED using the board. The Digilent Pmod OLED is required. In this example it should be connected to PMODA....
Python Code: from pynq.overlays.base import BaseOverlay from pynq.lib import Pmod_OLED base = BaseOverlay("base.bit") pmod_oled = Pmod_OLED(base.PMODA) pmod_oled.clear() pmod_oled.write('Welcome to \nPYNQ!') Explanation: Displaying text on a PmodOLED This demonstration shows how to display text on a PmodOLED using the ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Step1: Command mode vs Edit mode By default we are in COMMAND mode <li>Press **ENTER** the edit the current cell <li>Press **ESC** to switch back to command mode ## Main command mode shortcu...
Python Code: a = 1 b = 2 def my_simple_sum(a, b): Simple addition :param a: fist number :param b: second number print "Sum is:", a+b my_simple_sum(a,b) # Further down in the code we do some changes a = 100 # than we can go back and re-execute just the previous cell Explanation: Command mode vs Edit...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Copyright 2022 The TensorFlow Authors. Step1: Retrain a speech recognition model with TensorFlow Lite Model Maker <table class="tfo-notebook-buttons" align="left"> <td> <a target="_bl...
Python Code: #@title Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # dist...
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Given the following text description, write Python code to implement the functionality described below step by step Description: この例では、GIDで生成されたメッシュを使用しています。メッシュは四面体要素です。 Step1: パラメータの設定 まずはパラメータを設定します。 Step2: メッシュの読み込み メッシュを外部ファイルから読み込みます。 Step3: メッシュをParaviewのスクリプトでpng画像に打ち出し確認します。 Step4: 横と上から見たメッシュ図です。三脚のメッシュフ...
Python Code: import getfem as gf import numpy as np Explanation: この例では、GIDで生成されたメッシュを使用しています。メッシュは四面体要素です。 End of explanation file_msh = 'tripod.GiD.msh' degree = 2 linear = False incompressible = False # ensure that degree > 1 when incompressible is on.. E = 1e3 Nu = 0.3 Lambda = E*Nu/((1+Nu)*(1-2*Nu)) Mu = E/(2*(1+Nu...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Posterior inference for GGP graph model In this notebook, we'll infer the posterior distribution of yeast dataset using generalised gamma process graph model. Original source of the dataset ...
Python Code: import os import pickle import time from collections import defaultdict import matplotlib.pyplot as plt import numpy as np from scipy.io import loadmat from sgp import GGPgraphmcmc %matplotlib inline Explanation: Posterior inference for GGP graph model In this notebook, we'll infer the posterior distributi...
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Given the following text description, write Python code to implement the functionality described below step by step Description: eXamine Automation Tutorial This case study demonstrates how to use the REST API of eXamine to study an annotated module in Cytoscape. The module that we study has 17 nodes and 18 edges and ...
Python Code: # HTTP Client for Python import requests # Cytoscape port number PORT_NUMBER = 1234 BASE_URL = "https://raw.githubusercontent.com/ls-cwi/eXamine/master/data/" # The Base path for the CyRest API BASE = 'http://localhost:' + str(PORT_NUMBER) + '/v1/' #Helper command to call a command via HTTP POST def execut...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Function Node Satra once called the Function module, the "do anything you want card". Which is a perfect description. Because it allows you to put any code you want into an empty node, which...
Python Code: # Import Node and Function module from nipype import Node, Function # Create a small example function def add_two(x_input): return x_input + 2 # Create Node addtwo = Node(Function(input_names=["x_input"], output_names=["val_output"], function=add_two), ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Example for dimensionnality reduction Step1: convert integer in to binary string Step2: we apply this to a data we use enumerate to loop then save a dictionary to encapsulate of the values...
Python Code: import pandas as pd import numpy as np my_data = pd.DataFrame([1,2,3]) Explanation: Example for dimensionnality reduction End of explanation def to_binary(value): return "{0:b}".format(value) to_binary(5) unique_values = my_data.thrid.unique() Explanation: convert integer in to binary string End of exp...
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Given the following text description, write Python code to implement the functionality described below step by step Description: ES-DOC CMIP6 Model Properties - Landice MIP Era Step1: Document Authors Set document authors Step2: Document Contributors Specify document contributors Step3: Document Publication Specify...
Python Code: # DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'bnu', 'sandbox-1', 'landice') Explanation: ES-DOC CMIP6 Model Properties - Landice MIP Era: CMIP6 Institute: BNU Source ID: SANDBOX-1 Topic: Landice Sub-Topics: Glaciers, Ice. Proper...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Microsoft Emotion API Data Images were placed into the API by hand since there were so few. This step was automated using the API for the Baseline data Step1: Plotting sentiment for each im...
Python Code: def read_jsons(f, candidate): tmp_dict = {} with open(f) as json_file: data = json.load(json_file) for i in data[0]['scores']: if data[0]['scores'][i] > 0.55: # confidence score threshold. tmp_dict[i] = data[0]['scores'][i] else: tm...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Quandl Step1: Let's go over the columns Step2: <a id='pipeline'></a> Pipeline Overview Accessing the data in your algorithms & research The only method for accessing partner data within al...
Python Code: # import the dataset from quantopian.interactive.data.quandl import yahoo_index_vix as dataset # Since this data is provided by Quandl for free, there is no _free version of this # data set, as found in the premium sets. This import gets you the entirety of this data set. # import data operations from odo ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: EEG forward operator with a template MRI This tutorial explains how to compute the forward operator from EEG data using the standard template MRI subject fsaverage. .. important Step1: Load...
Python Code: # Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr> # Joan Massich <mailsik@gmail.com> # # License: BSD Style. import os.path as op import mne from mne.datasets import eegbci from mne.datasets import fetch_fsaverage # Download fsaverage files fs_dir = fetch_fsaverage(verbose=True) subjects...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Exploratory Data Analysis Step1: Data Cleaning Step2: Random Forest Step3: Random Forest Results ``` 0.79426 ['AgeSex', 'AgeSexFare', 'Fare', 'Sex', 'Pclass', 'Age'] create_submission(Ran...
Python Code: test.info() train.describe() # train.Cabin.str.split().str.get(-1).str[0] # train.Cabin.str.split(expand=True) # train.Ticket.str.split().str.get(0).str.extract train.Ticket.str.split()[0:].str[0].head() print train[train['Survived']==1]["Age"].mean(), print train[train['Survived']==0]["Age"].mean(), print...
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Given the following text description, write Python code to implement the functionality described below step by step Description: PyGSLIB Draw The GSLIb equivalent parameter file is ``` Parameters for DRAW *** START OF PARAMETERS Step1: Getting the data ready for work If the data is...
Python Code: #general imports import matplotlib.pyplot as plt import pygslib import numpy as np import pandas as pd #make the plots inline %matplotlib inline Explanation: PyGSLIB Draw The GSLIb equivalent parameter file is ``` Parameters for DRAW *** START OF PARAMETERS: data/...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Notebook 4 Step2: Download the sequence data Sequence data for this study are archived on the NCBI sequence read archive (SRA). Below I read in SraRunTable.txt for this project which contai...
Python Code: ### Notebook 4 ### Data set 4 (Orestias) ### Authors: Takahashi & Moreno (2015) ### Data Location: DDBJ DRA DRA003595 Explanation: Notebook 4: This is an IPython notebook. Most of the code is composed of bash scripts, indicated by %%bash at the top of the cell, otherwise it is IPython code. This notebook i...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Introduction A cold atom experimental setup on an optical table is a useful metaphor for the philosophy underlying the cold-atom library. In such an experimental apparatus there are expensiv...
Python Code: import coldatoms import numpy as np %matplotlib notebook import matplotlib.pyplot as plt Explanation: Introduction A cold atom experimental setup on an optical table is a useful metaphor for the philosophy underlying the cold-atom library. In such an experimental apparatus there are expensive, complicated ...
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Given the following text description, write Python code to implement the functionality described below step by step Description: 线性支持向量机的朴素实现 虽然从形式上来说,线性支持向量机(LinearSVM)和感知机的差别只在于损失函数,但如果只是简单地将感知机的训练策略(亦即每次只选出使得损失函数最大的样本点来进行梯度下降)迁移过来的话、会引发一些问题。为方便,我们称感知机的训练策略为极大梯度下降法(注:这不是被广泛承认的称谓,只是本文的一个代称) 我们会先展示极大梯度下降法的有效性,然后会展示极大梯...
Python Code: import numpy as np class LinearSVM: def __init__(self): self._w = self._b = None def fit(self, x, y, c=1, lr=0.01, epoch=10000): x, y = np.asarray(x, np.float32), np.asarray(y, np.float32) self._w = np.zeros(x.shape[1]) self._b = 0. for _ in range(ep...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Compare Solutions - Homogenous (Eurus) Brendan Smithyman | October 2015 This notebook shows comparisons between the responses of the different solvers. Step1: Error plots for Eurus vs. the ...
Python Code: import sys sys.path.append('../') import numpy as np from zephyr.backend import Eurus, SparseKaiserSource, AnalyticalHelmholtz import matplotlib.pyplot as plt import matplotlib.cm as cm import matplotlib %matplotlib inline from IPython.display import set_matplotlib_formats set_matplotlib_formats('png') mat...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Diferencias Finitas El método de diferencias finitas corresponde a una aproximación discreta del dominio del problema, generando un sistema de ecuaciones para tal efecto. Tanto Ecuaciones di...
Python Code: import numpy as np import matplotlib.pyplot as plt %matplotlib inline # Rango de tiempo tt = np.linspace(0, 1, 100) # Solución Analítica def y(t): return (np.exp(-2*t)*(-3*np.exp(2)+np.exp(4)-np.exp(4*t)+ 3*np.exp(2+4*t)))/(-1+np.exp(4)) yy = y(tt) # Matriz de diferencias finitas que depende de n def D...
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Given the following text description, write Python code to implement the functionality described below step by step Description: syncID Step1: For this example, we will read in a reflectance tile in ENVI format. NEON provides an h5 plugin for ENVI Step2: Note that the information is stored differently when read in w...
Python Code: from spectral import * import spectral.io.envi as envi import numpy as np import matplotlib #for clean output, to not print warnings, don't use when developing script import warnings warnings.filterwarnings('ignore') Explanation: syncID: 75f8885948494c0dbe6084099c61dd1e title: "Unsupervised Spectral Classi...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Budget accounting with diffprivlib Diffprivlib includes a budget accountant to allow you to keep track of privacy budget being spent. The budget accounting is handled by the BudgetAccountant...
Python Code: import matplotlib.pyplot as plt from numpy.random import random from diffprivlib import BudgetAccountant from diffprivlib.tools import mean, var X = random(100) acc = BudgetAccountant(epsilon=5, delta=0) dp_mean = mean(X, bounds=(0, 1), accountant=acc) print("Total spent: %r" % (acc.total(),)) print("Remai...
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Given the following text problem statement, write Python code to implement the functionality described below in problem statement Problem: load a DistilGPT2 tokenizer to process the text subfield
Python Code:: from transformers import AutoTokenizer tokenizer = AutoTokenizer.from_pretrained("distilgpt2")
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Given the following text description, write Python code to implement the functionality described below step by step Description: Bayesian Changepoint Detection in Python This code computes the probability of changepoints in a time series.7 In this notebook I show how you can use it. First let's generate some data Step...
Python Code: from __future__ import division import numpy as np import matplotlib.pyplot as plt import seaborn from bayesian_changepoint_detection.generate_data import generate_normal_time_series %matplotlib inline %load_ext autoreload %autoreload 2 partition, data = generate_normal_time_series(7, 50, 200) Explanation:...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Step2: Week 11 Step3: Before we go on a note of caution is needed for class attributes. Do you remember the strange fibonacci sequence function from our first class? Step6: The same issue ...
Python Code: class Person(object): A class definition for a person. The following attributes are supported: Attributes: name: A string representing the person's name. age: An integer representing the person's age. mammal = True def __init__(self, name, age): Return a Perso...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Maximum Likelihood Estimation Step1: Best parameter for n4 Step2: after removing the constant part Step3: Coin example Setup problem Step4: Looking at the experient shown above, we can e...
Python Code: from math import factorial as fac from numpy import math import numpy as np import random from collections import Counter %matplotlib inline n = 1000 experiments = [] for i in range(n): a = random.randint(1, 6) # key = "{}-{}".format(a, b) # experiments[key] = experiments.get(key, 0) + 1 ex...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Adding new passbands to PHOEBE In this tutorial we will show you how to add your own passband to PHOEBE. Adding a passband involves Step1: I don't care about the details, just show/remind m...
Python Code: !pip install -I "phoebe>=2.0,<2.1" Explanation: Adding new passbands to PHOEBE In this tutorial we will show you how to add your own passband to PHOEBE. Adding a passband involves: * providing a passband transmission function; * defining and registering parameters of the passband; * computing blackbody res...
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Given the following text description, write Python code to implement the functionality described below step by step Description: In this notebook we will use the same Cython code as in the last notebook. However, this time we will use the Vode integrator from ODEPACK (available in SciPy in scipy.integrate.ode). The re...
Python Code: import json import numpy as np Explanation: In this notebook we will use the same Cython code as in the last notebook. However, this time we will use the Vode integrator from ODEPACK (available in SciPy in scipy.integrate.ode). The reason for this is that it will be a fairer comparison against our upcoming...
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Given the following text description, write Python code to implement the functionality described below step by step Description: See environment_setup.README (below) for instructions about the use of the DC3_plots_NALMA script. It is a version of the script used to process the DC3 dataset as in Barth et al. (2015, BAM...
Python Code: %%bash cat /data/GLM-wkshp/flashsort/environment_setup.README # Links to representative PDFs. from IPython.display import display, HTML, Image class PDF(object): def __init__(self, filename): self.filename = filename def _repr_pdf_(self): return open(self.filename, 'rb').read() base...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Interpolation with RBF $$ f( x) =\sum ^{P}{p=1} a{p} .R_{p} +b $$ $$ R_{p} = e^{-\frac{1}{2\sigma ^{2}} .\parallel ( X_{i}) -( X_{p}) \parallel ^{2}} $$ $$ \sigma =\frac{P_{max} -P_{min}}{\s...
Python Code: def rbf(inp, out, center): def euclidean_norm(x1, x2): return sqrt(((x1 - x2)**2).sum(axis=0)) def gaussian (x, c): return exp(+1 * pow(euclidean_norm(x, c), 2)) R = np.ones((len(inp), (len(center) + 1))) for i, iv in enumerate(inp): for j, jv in enumerate(...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Introduction This IPython notebook explains a basic workflow two tables using py_entitymatching. Our goal is to come up with a workflow to match DBLP and ACM datasets. Specifically, we want ...
Python Code: import sys sys.path.append('/Users/pradap/Documents/Research/Python-Package/anhaid/py_entitymatching/') import py_entitymatching as em import pandas as pd import os # Display the versions print('python version: ' + sys.version ) print('pandas version: ' + pd.__version__ ) print('magellan version: ' + em.__...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Creating gallery images for annotation review Overview Step1: Connect girder client and set parameters A csv file like the one in histomicstk/annotations_and_masks/tests/test_files/sample_G...
Python Code: import os import tempfile import shutil from imageio import imread from pandas import read_csv import girder_client from histomicstk.annotations_and_masks.review_gallery import \ get_all_rois_from_folder_v2, get_all_rois_from_slide_v2, \ _plot_rapid_review_vis, create_review_galleries import matplo...
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Given the following text description, write Python code to implement the functionality described below step by step Description: 2D Poisson Problem We solve the following problem Step1: Test set 2 Step2: Test set 3 Step3: Test set 4 Step4: Test set 5 Step5: Test set 6 Step6: 3D Poisson Problem Weak Scaling Test ...
Python Code: omg=numpy.array([0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1]) tPCG = numpy.array([5.72, 4.54, 3.78, 3.14, 2.71, 2.38, 2.06, 1.95, 2.49, 10.15]) tPCGF = numpy.array([2.48, 2.14, 2.03, 2.6, 10.7]) tPBICGSTAB = numpy.array([2.79, 2.58, 2.48, 3, 12.1]) pyplot.plot(omg, tPCG, label="PCG") pyplot.plot(omg[5:...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Clean up data Sometimes, unwanted data needs to be deleted. Each of the screenshot data was manually checked, and was moved to the wrong/ directory. This notebook iterates through the wrong/...
Python Code: %ls -lh ../data/csv import pandas as pd import os parent_path = os.path.dirname(os.getcwd()) csv_file = '97802012' csv_file_name = csv_file + '.csv' csv_dir_path = os.path.join(parent_path, 'data', 'csv') csv_file_path = os.path.join(csv_dir_path, csv_file_name) img_dir_path = os.path.join(parent_path, 'd...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Skip-gram word2vec In this notebook, I'll lead you through using TensorFlow to implement the word2vec algorithm using the skip-gram architecture. By implementing this, you'll learn about emb...
Python Code: import time import numpy as np import tensorflow as tf import utils Explanation: Skip-gram word2vec In this notebook, I'll lead you through using TensorFlow to implement the word2vec algorithm using the skip-gram architecture. By implementing this, you'll learn about embedding words for use in natural lang...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Conformal Kernel Distribution Embedding Conformal Anomaly Detector via RBF Kernel Embddeing Below are shown sample results obtained in this project. On left are level sets of the nominal biv...
Python Code: import time import os import numpy as np from sklearn.grid_search import ParameterGrid from sklearn.base import clone from sklearn.gaussian_process import GaussianProcess from scipy.stats import norm from joblib import Parallel, delayed from utils.state import _save from utils.functions_1d import f6, press...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Random variables When the objective is to predict the category (qualitative, such as predicting political party affiliation), we term the it as predicting a qualitative random variable. On t...
Python Code: import math def bin_prob(n,y,pi): a = math.factorial(n)/(math.factorial(y)*math.factorial(n-y)) b = math.pow(pi, y) * math.pow((1-pi), (n-y)) p_y = a*b return p_y Explanation: Random variables When the objective is to predict the category (qualitative, such as predicting political party aff...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Python Basics with Numpy (optional assignment) Welcome to your first assignment. This exercise gives you a brief introduction to Python. Even if you've used Python before, this will help fam...
Python Code: ### START CODE HERE ### (≈ 1 line of code) test = None ### END CODE HERE ### print ("test: " + test) Explanation: Python Basics with Numpy (optional assignment) Welcome to your first assignment. This exercise gives you a brief introduction to Python. Even if you've used Python before, this will help famili...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Logistic Regression with L2 regularization The goal of this second notebook is to implement your own logistic regression classifier with L2 regularization. You will do the following Step1: ...
Python Code: from __future__ import division import graphlab Explanation: Logistic Regression with L2 regularization The goal of this second notebook is to implement your own logistic regression classifier with L2 regularization. You will do the following: Extract features from Amazon product reviews. Convert an SFrame...
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Given the following text description, write Python code to implement the functionality described below step by step Description: A regular expression (regex, RE) is a sequence of characters that define a search pattern. Usually this pattern is used by string searching algorithms for "find" or "find and replace" operat...
Python Code: import re Explanation: A regular expression (regex, RE) is a sequence of characters that define a search pattern. Usually this pattern is used by string searching algorithms for "find" or "find and replace" operations on strings. For example, search engines use regular expressions to find matches to your q...
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Given the following text description, write Python code to implement the functionality described below step by step Description: Conda and binstar are changing the packaging world of Python. Conda made it easy to install re-locatable python binaries that where hard to build, while binstar provides a "Linux repository-...
Python Code: import re import requests import numpy as np from datetime import date from pandas import DataFrame from bs4 import BeautifulSoup from dateutil.relativedelta import relativedelta def todatetime(ul_str): upload = re.compile(r'((?P<year>\d+) years?)?( and )?((?P<month>\d+) months?)?( and )?((?P<day>\d+) ...