__key__ stringlengths 16 21 | __url__ stringclasses 1
value | txt stringlengths 183 1.2k |
|---|---|---|
funcom_train/9765781 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public boolean isMoleculeLoaded() {
MoleculeInterface m = java3dUniverse.getMolecule();
if (m == null) {
JOptionPane.showMessageDialog(this.getParentFrame(), "Load Molecule first!", "Warning",
JOptionPane.WARNING_MESSAGE);
return false;
}
return true;
}
COM: <s> checks whether molecule loaded or not </s>
|
funcom_train/19378184 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: protected void process(String expression) throws IOException {
String methodName = "process";
ExceptionUtils.checkEmpty(methodName, "expression", expression);
try {
Lexer lexer =
new Lexer(new PushbackReader(new StringReader(expression)));
OclParser parser = new OclParser(lexer);
Start startNode = parser.parse();
this.translatedExpression = new Expression(expression);
startNode.apply(this);
} catch (ParserException ex) {
throw new OclParserException(ex.getMessage());
} catch (LexerException ex) {
throw new OclParserException(ex.getMessage());
}
}
COM: <s> parses the expression and applies this translator to it </s>
|
funcom_train/29313975 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: static final public String fromCamelNotation(final String prefix, final String name) {
final int length = prefix == null ? 0 : prefix.length();
String s = "";
for (int j = length; j < name.length(); j++) {
final char c = name.charAt(j);
if (Character.isUpperCase(c)) {
if (j > length)
s += "-";
s += Character.toLowerCase(c);
} else
s += c;
}
return s;
}
COM: <s> transform a string to camel notation </s>
|
funcom_train/13260017 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void trSelf() {
for ( int r = 1; r < 4; r++ ) {
for ( int c = 0; c < r; c++ ) {
float t = get( c, r );
set( c, r, get( r, c ) );
set( r, c, t );
}
}
}
COM: <s> self transposes the matrix </s>
|
funcom_train/39261743 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public String getTex() {
String regex = String.format("%s|%s|%s",
"(?<=[A-Z])(?=[A-Z][a-z])",
"(?<=[^A-Z])(?=[A-Z])",
"(?<=[A-Za-z])(?=[^A-Za-z])"
);
String[] str = this.getRoleName().split(regex);
String outStr = "{{" + str[0] + "}{" + str[1]+ "}}";
if (str.length > 2) {
outStr += "_" + "{" + str[2].substring(1) + "}";
}
return outStr;
}
COM: <s> get a tex representation of this flux object </s>
|
funcom_train/26474901 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public Object getValue(Object row) {
if (this.attribute == null)
return null;
if (this.columnAttribute == null) {
this.columnAttribute = this.getAttributeForColumn(this.attribute);
}
if (this.columnAttribute.equals(this.attribute))
return ViewModelManager.getValue(this, this.attribute);
else
return ModelManager.getValue(row, this.columnAttribute, this);
}
COM: <s> returns the value for this code column code from the specified row </s>
|
funcom_train/39305352 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private Workbook getReadonlyWorkbook(File inputFile) throws ExcelException {
try {
// check the file (throws an exception if there's an error)
inputFile = FileUtils.checkFile(inputFile);
// retrieve the workbook
return Workbook.getWorkbook(inputFile, workbookSettings);
}
catch (IOException ioe) {
throw new ExcelException(ioe);
}
catch (BiffException be) {
throw new ExcelException(be);
}
}
COM: <s> get a reference to a read only excel workbook </s>
|
funcom_train/3813134 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private HypothesisUtterance nextUtterance() throws IOException {
String line = reader.readLine();
if (line != null) {
utteranceCount++;
HypothesisUtterance utterance = new HypothesisUtterance(line);
if (utterance.getWordCount() <= 0) {
return nextUtterance();
} else {
return utterance;
}
} else {
return null;
}
}
COM: <s> returns the next available hypothesis utterance </s>
|
funcom_train/49402607 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private File createIndexFile(File bamFile) throws IOException {
final File bamIndexFile = File.createTempFile("Bai.", ".bai");
final SAMFileReader bam = new SAMFileReader(bamFile);
BuildBamIndex.createIndex(bam, bamIndexFile);
verbose ("Wrote BAM Index file " + bamIndexFile);
return bamIndexFile;
}
COM: <s> generates the index file using the latest java index generating code </s>
|
funcom_train/4780132 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public JPanel getAccessRuleActionsPanel() {
if (accessRuleActionsPanel == null) {
accessRuleActionsPanel = new JPanel(new FlowLayout(FlowLayout.LEFT));
accessRuleActionsPanel.add(getAddAccessRuleButton());
accessRuleActionsPanel.add(getAddProjectAccessRulesButton());
accessRuleActionsPanel.add(getEditAccessRuleButton());
accessRuleActionsPanel.add(getDeleteAccessRuleButton());
}
return accessRuleActionsPanel;
}
COM: <s> this method initializes access rule actions panel </s>
|
funcom_train/43548953 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public OutputStream setContent() throws XmldbException {
try {
return new InsertStream(this);
} catch (IOException e) {
String msg = String.format("Could not store document: '%s'", this);
LOG.error(msg, e);
throw new XmldbException(msg, e);
}
}
COM: <s> sets the documents content using an output stream </s>
|
funcom_train/7266943 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void start() {
if (shutdown.get()) {
throw new IllegalStateException();
}
for (int i = 0; i < MAX_BUFFERS && (i == 0 || i * BUFFER_SIZE + 1 <= remaining); i++) {
bufferPool.add(bufferCache.getHeap(BUFFER_SIZE));
}
spawnJobs();
}
COM: <s> starts the processing queue that reads the file </s>
|
funcom_train/25659907 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public BLoMoResult combine( BLoMoResult arg ) {
return new BLoMoResult(
continueProcessingAll && arg.continueProcessingAll,
continueProcessingThis && arg.continueProcessingThis,
BLoMoResultType.values()[Math.min(type.ordinal(), arg.type.ordinal())],
continueTestingAll && arg.continueTestingAll,
continueTestingThis && arg.continueTestingThis,
rollbackAll || arg.rollbackAll,
rollbackThis || arg.rollbackThis
);
}
COM: <s> combines two results </s>
|
funcom_train/25710163 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public int runDemarcationsCI() {
String[] command = {
binaryDirectory + "demarcationsCI" + binaryExtension,
workingDirectory + "demarcationsIn.dat",
workingDirectory + "demarcationsOut.dat",
Boolean.toString(masterVariables.getDebug())
};
return runApplication("Demarcations CI", command, true);
}
COM: <s> runs the demarcations confidence interval application </s>
|
funcom_train/5380666 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: protected void initializeBounds() {
if (resizeListener != null) {
shell.removeListener(SWT.Resize, resizeListener);
}
if (resizeHasOccurred) { // Check if shell size has been set already.
return;
}
Point size = getInitialSize();
Point location = getInitialLocation(size);
shell.setBounds(getConstrainedShellBounds(new Rectangle(location.x,
location.y, size.x, size.y)));
}
COM: <s> initializes the location and size of this windows swt shell after it has </s>
|
funcom_train/49262781 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void register(final PartTabFolder tabFolder) {
//TODO View parts drag and drop
// tabFolder.addMouseListener(new MouseAdapter() {
// @Override
// public void mouseDown(final MouseEvent e) {
// initializeDrag(tabFolder, tabFolder.getObject(e.x, e.y));
// }
// @Override
// public void mouseUp(final MouseEvent e) {
// finalizeDrag();
// }
// });
}
COM: <s> registers a tab folder to allow drag and drop on it </s>
|
funcom_train/25943834 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private PluginServiceConnection connectToPlugin(String pluginClass) {
PluginServiceConnection conn = new PluginServiceConnection();
boolean connSuccess = ctx.bindService(new Intent(pluginClass), conn, Context.BIND_AUTO_CREATE);
int timeToWait = TIME_TO_WAIT_FOR_PLUGIN_CONNECTION;
while (conn.plugin == null && timeToWait > 0) {
// Logger.DEBUG(TAG, "plugin connection : " +
// conn.plugin);
timeToWait -= 100;
try {
Thread.sleep(100);
} catch (InterruptedException e) {
}
}
return conn;
}
COM: <s> connects to plugin via aidl and returns plugin service connection for use </s>
|
funcom_train/30075670 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: protected ModelAndView onSubmit(Object command) throws ServletException {
Architecture architecture = (Architecture) command;
// delegate the insert to the Business layer
getGpir().storeArchitecture(architecture);
return new ModelAndView(getSuccessView(), "architectureId", Integer.toString(architecture.getId()));
}
COM: <s> method inserts a new code architecture code </s>
|
funcom_train/28024892 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void setEnumeratedProperty (final String key, final String[] values) {
int i;
for (i=0; i < values.length; i++) {
this.setProperty(key + delimiter + i, values[i]);
}
while (this.getProperty(key + delimiter + i) != null) {
this.remove(key + delimiter + i);
i++;
}
}
COM: <s> assigns the supplied array of string values to the supplied key </s>
|
funcom_train/31056839 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void renderDisconnectFromAll( Agent a, Agent[] incoming, Agent[] outgoing ) {
for( int i=0; i < outgoing.length; i++ )
renderDisconnectAgents( a, outgoing[i] );
for( int i=0; i < incoming.length; i++ )
renderDisconnectAgents( incoming[i], a );
}
COM: <s> this method needs to be implemented for when an agent disconnects from all </s>
|
funcom_train/28378580 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void debugf(final String format, final Object... args) {
if (Level.DEBUG.value <= level.value) {
try {
log(Level.DEBUG.name, new Formatter().format(format, args));
} catch (Exception e) {
log(Level.DEBUG.name, format, args, e);
}
}
}
COM: <s> log a formatted message with the given object or primitive arguments if </s>
|
funcom_train/25665364 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private void showProcessedCount(int newCount) {
if (this.processedCountItem == null) {
this.processedCountItem = new StringItem("Processed count:", "0");
append( processedCountItem );
}
this.processedCountItem.setText( String.valueOf(newCount) );
}
COM: <s> show the cout of records restored so far to the user </s>
|
funcom_train/49757359 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void addRoomListener(UPBRoomListenerI theListener, UPBRoomI forRoom) {
synchronized(roomListenerList) {
for (QualifiedRoomListener roomListener: roomListenerList) {
if (roomListener.theListener != theListener) continue;
if (roomListener.theRoom != forRoom) continue;
// Listener already exists
return;
}
roomListenerList.add(new QualifiedRoomListener(theListener, forRoom));
}
}
COM: <s> add a upb room listener for a specific room </s>
|
funcom_train/37207567 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testRavenEnabledBeanConstruction() {
ApplicationContext context = new RavenAwareClassPathXmlApplicationContext(
"applicationContext.xml");
Object o = context.getBean("ravenTestBean");
System.out.println(o.toString());
System.out.println(o.getClass().getClassLoader().toString());
assertEquals(o.getClass().getName(),
"net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce");
context.getBean("testSPI");
}
COM: <s> test verbose form of context configuration and instantiation of a remote </s>
|
funcom_train/50504776 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void save() {
String roleName = roleNameField.getText();
String desc = roleDescField.getText();
if (role == null) {
role = manager.addSecurityRole(roleName, desc);
} else {
role.setName(roleName);
role.setDescription(desc);
}
}
COM: <s> saves the gui inputs to the security role bean </s>
|
funcom_train/13320018 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public String moveSelectedLeft() {
for (Object id : this.selectedActionsForDelete) {
for (SelectItem item : this.assignedActions) {
if (item.getValue().equals(id.toString())) {
this.assignedActions.remove(item);
}
}
}
return BeansUtils.ADD_ROLE_NAVIGATION;
}
COM: <s> this method is used to remove selected actions from list </s>
|
funcom_train/13863413 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public int compare(TableColumn tc1, TableColumn tc2) {
int rank1 = Integer.MAX_VALUE;
if (tc1.isSetDefaultColumnRank())
rank1 = tc1.getDefaultColumnRank();
int rank2 = Integer.MAX_VALUE;
if (tc2.isSetDefaultColumnRank())
rank2 = tc2.getDefaultColumnRank();
if (rank1<rank2)
return -1;
if (rank1>rank2)
return 1;
String title1 = "";
if (tc1.isSetDcTitle())
title1 = tc1.getDcTitle();
String title2 = "";
if (tc2.isSetDcTitle())
title2 = tc2.getDcTitle();
return title1.compareTo(title2);
}
COM: <s> order by rank smallest first then title name </s>
|
funcom_train/3944305 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public Position join(LengthVector v) {
Amount<Length> newX = positionX.plus(v.getLengthX());
Amount<Length> newY = positionY.plus(v.getLengthY());
Amount<Length> newZ = positionZ.plus(v.getLengthZ());
return fromXYZVectors(newX, newY, newZ);
}
COM: <s> creates a new position that is this position translated by </s>
|
funcom_train/32908545 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public boolean isFreshCache(Object key, DbCalendar mostRecent) {
try {
sync.requestRead();
boolean fresh = false;
if (cachedresults.containsKey(key)) {
DbCalendar cachedMostRecent = cachedresults.get(key).mostRecentDate;
if (mostRecent.getTimeInMillis() <= cachedMostRecent.getTimeInMillis()) {
fresh = true;
} else {
fresh = false;
}
} else {
fresh = false;
}
return fresh;
} finally {
sync.readFinished();
}
}
COM: <s> determines if there is a cached list and it is not stale </s>
|
funcom_train/12646416 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void addNotify() {
synchronized (getTreeLock()) {
if (parent != null && parent.peer == null) {
parent.addNotify();
}
if (peer == null)
peer = ((PeerBasedToolkit) getToolkit()).createFileDialog(this);
super.addNotify();
}
}
COM: <s> creates the file dialogs peer </s>
|
funcom_train/38787416 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void orders_clear() {
for (Order o : orderqueue) { //unsubscribe!!!
o.unsubscribe();
}
if (orderAble()) {
orderqueue.clear();
//order.target = new OrderTarget(0,0);
//order.ordertype = Order.OrderType.empty;
}
}
COM: <s> clear orders of the ship </s>
|
funcom_train/2288537 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void setOldWebAppUrl(String webAppUrl) {
if (LOG.isDebugEnabled()) {
LOG.debug(Messages.get().getBundle().key(Messages.LOG_IMPORTEXPORT_SET_OLD_WEBAPP_URL_1, webAppUrl));
}
m_webAppUrl = webAppUrl;
}
COM: <s> sets the url of a 4 </s>
|
funcom_train/43903964 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public int count(final Object metadata, final int max) {
assert type.isInstance(metadata);
int count = 0;
for (int i = 0; i < getters.length; i++) {
if (!isEmpty(get(getters[i], metadata))) {
if (++count >= max) {
break;
}
}
}
return count;
}
COM: <s> counts the number of non null properties </s>
|
funcom_train/32057868 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testGetButtonRectangle() {
System.out.println("testGetButtonRectangle");
GPGraphpad pad = new GPGraphpad();
GPMarqueeHandler handler = new GPMarqueeHandler(pad);
assertEquals("getButtonRectangle failed", handler.getButtonRectangle() != null, true);
//pad.getFrame().dispose();
}
COM: <s> test of get button rectangle method of class gpmarquee handler </s>
|
funcom_train/24140384 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public QualitySequence decode(String fastqQualities) {
ByteBuffer buffer = ByteBuffer.allocate(fastqQualities.length());
for(int i=0; i<fastqQualities.length(); i++){
buffer.put(decode(fastqQualities.charAt(i)).getValue());
}
return new EncodedQualitySequence(
qualityCodec,
PhredQuality.valueOf(buffer.array()));
}
COM: <s> decode the given fastq quality encoded string </s>
|
funcom_train/3990045 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: protected void addCzy_pierwsze_zachorowaniePropertyDescriptor(Object object) {
itemPropertyDescriptors.add
(createItemPropertyDescriptor
(((ComposeableAdapterFactory)adapterFactory).getRootAdapterFactory(),
getResourceLocator(),
getString("_UI_HistoriaChoroby_czy_pierwsze_zachorowanie_feature"),
getString("_UI_PropertyDescriptor_description", "_UI_HistoriaChoroby_czy_pierwsze_zachorowanie_feature", "_UI_HistoriaChoroby_type"),
PrzychodniaPackage.Literals.HISTORIA_CHOROBY__CZY_PIERWSZE_ZACHOROWANIE,
true,
false,
false,
ItemPropertyDescriptor.BOOLEAN_VALUE_IMAGE,
null,
null));
}
COM: <s> this adds a property descriptor for the czy pierwsze zachorowanie feature </s>
|
funcom_train/5858969 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public Vector getFSObjectsAsString() {
Vector v = new Vector();
for(Iterator i = fsobjs.values().iterator(); i.hasNext();) {
FSObject fso = (FSObject) i.next();
v.addElement(new ActiveUserProperty(fso));
}
return v;
}
COM: <s> returns a list of active user property </s>
|
funcom_train/14416531 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void close() {
if (!iClose) {
iClose = true;
try {
iServerSocket.close();
iServerSocket = null;
} catch (Exception e) {
Logger logger = SessionProperties.getGlobalProperties().getLogger();
if (logger.isLoggable(Level.WARNING)) {
logger.log(Level.WARNING, "Exception while closing server socket", e);
}
}
}
}
COM: <s> shuts down the server </s>
|
funcom_train/2903297 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void clearSelection(String id){
if(id == null){
return;
}
if(current != null){
LineBorder border = new LineBorder(current.getForegroundData(), 1, true);
Border margin = new EmptyBorder(2, 3, 2, 3);
current.setBorder(new CompoundBorder(margin, border));
}
if(!ids.contains(id)){
current = null;
}
}
COM: <s> clear current selected switcher selection </s>
|
funcom_train/21688974 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void convertUtf8ToIso() {
this.name = convertUtf8ToIso(name);
this.author = convertUtf8ToIso(author);
this.keywords = convertUtf8ToIso(keywords);
this.description = convertUtf8ToIso(description);
this.code = convertUtf8ToIso(code);
this.example = convertUtf8ToIso(example);
}
COM: <s> convert utf8 to iso 8859 1 </s>
|
funcom_train/14120883 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private Object getOne(Class clazz, String name) {
Criteria crit = getHibernateTemplate().getSessionFactory().getCurrentSession().createCriteria(clazz);
crit.add(Restrictions.eq("name", name));
List l = crit.list();
Object result;
if (l.size() == 0)
result = null;
else
result = l.get(0);
return result;
}
COM: <s> gets first system variable from possible list of system variables with the </s>
|
funcom_train/15801973 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: protected String readInputLine() throws IOException {
StringBuffer buf = new StringBuffer(1024);
int c;
boolean skip = false;
while ((c=in.read()) != -1) {
if (c == '\r')
switch (c=in.read()) {
case -1:
case '\n': break;
default:
in.unread(c);
}
if (c == '\n') break;
if (buf.length() == 1024) skip = true;
if (!skip) buf.append((char)c);
}
return buf.toString();
}
COM: <s> reads a command from the client </s>
|
funcom_train/12333116 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public String getDOI(int doiType) throws Exception {
Call call = service.createCall();
call.setTargetEndpointAddress(endpointAddress);
call.setOperationName(operationName);
String doi = (String)call.invoke(new Object[] { new Integer(doiType) });
return doi;
} //- getDOI
COM: <s> gets a new doi from the doiserver </s>
|
funcom_train/777460 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testGetPlatformObjectNameString() throws JademxException {
JadeAgent jadeAgent = platformMBean.getAgent( AGENT_LOCAL_NAME_PINGER2);
String actualPN = jadeAgent.getPlatformObjectNameString();
assertEquals("expected platform ObjectName string \""+
PINGER2_EXPECTED_PLATFORM_OBJECT_NAME_STRING+
"\" but got \""+actualPN+"\"",
PINGER2_EXPECTED_PLATFORM_OBJECT_NAME_STRING,actualPN);
}
COM: <s> test getting agents platforms object name string </s>
|
funcom_train/8803800 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public int replaceString ( String from, String to){
cpinfo cpi, pool[] = constant_pool;
int len = pool.length, changes = 0;
for ( short cc = 0; cc < len; cc++){
cpi = pool[cc];
if ( TYPE_STRING == cpi.type){
cpi = pool[cpi.arg1_idx];
if ( from.equals(cpi.strValue)){
cpi.strValue = to;
changes += 1;
}
}
}
return changes;
}
COM: <s> replace all strings matching from with to </s>
|
funcom_train/8930836 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public boolean equals(Object obj) {
// Compare handles.
if (this == obj)
return true;
// Compare class.
if (!(obj instanceof DrillFrame))
return false;
// Compare contents.
DrillFrame oOther = (DrillFrame)obj;
return ((fElement == oOther.fElement) &&
(fPropertyName.equals(oOther.fPropertyName)));
}
COM: <s> compares two objects for equality </s>
|
funcom_train/35806402 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: /*
* private JPanel getJPanelInfos() { if (jPanelInfos == null) { jPanelInfos = new JPanel(); BorderLayout jPanelInfosLayout = new BorderLayout(); jPanelInfos.setLayout(jPanelInfosLayout); jPanelInfos.addMouseListener(vueDetaillePanelMouseAdapter); jPanelInfos.add(getJInfosEditorPane(), BorderLayout.CENTER); } return jPanelInfos; }
COM: <s> this method initializes j panel infos </s>
|
funcom_train/17250588 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private void fetchData() throws IOException {
if (!eos) {
// copy (bufsize) bytes from compressed stream to syncState.
int index = syncState.buffer(bufsize);
int bytes = in.read(syncState.data, index, bufsize);
syncState.wrote(bytes);
if (bytes == 0) {
eos = true;
}
}
}
COM: <s> copys data from input stream to sync state </s>
|
funcom_train/10977983 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public boolean equals(Object o) {
if (!(o instanceof MessagesMap)) {
return (false);
}
MessagesMap other = (MessagesMap) o;
if (!messages.equals(other.getMessages())) {
return (false);
}
if (locale == null) {
return (other.getLocale() == null);
} else {
return (locale.equals(other.getLocale()));
}
}
COM: <s> p the code equals code method checks whether equal </s>
|
funcom_train/12179329 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testInvokeMultipleIndexes() throws Exception {
Expression expression =
parser.parse(getFunctionQName() + "('name',1,2,3,4)");
formatReferenceFinderMock.expects
.getFormatReference("name", new int[]{1,2,3,4})
.returns(formatReferenceMock);
doTestFunction(expression);
}
COM: <s> name and multiple indexes </s>
|
funcom_train/21297164 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private JLabel getSpeechLbl(){
if(speechAreaLbl == null)
{ speechAreaLbl = new JLabel("<html>Enter Text Here and Emma will say it!<br>Hit Enter to Send",JLabel.CENTER);
speechAreaLbl.setBounds(getVolume().getX()+getVolume().getWidth()+10, 10, txtSpchPanel.getWidth()/(2), txtSpchPanel.getHeight()-280);
}
return speechAreaLbl;
}
COM: <s> this method initializes speech area lbl </s>
|
funcom_train/26018088 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void setTTLParam(int ttl) {
if (ttl <= 0)
throw new IllegalArgumentException("Bad ttl value");
if (uriParms != null) {
NameValue nv = new NameValue("ttl", Integer.valueOf(ttl));
uriParms.set(nv);
}
}
COM: <s> sets the value of the code ttl code parameter </s>
|
funcom_train/19913245 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void processProperty(AbstractFile file, Prop toProcess) {
assert toProcess != null;
if (!this.hasProperty(toProcess.getName())) {
values.put(toProcess.getName(),
new Integer(toProcess.operate(file)));
Prop[] copy = new Prop[propertyResolvers.length + 1];
System.arraycopy(propertyResolvers, 0, copy, 0,
propertyResolvers.length);
copy[copy.length - 1] = toProcess;
this.propertyResolvers = copy;
}
}
COM: <s> this method will add the given property to the statistics if not already </s>
|
funcom_train/9804336 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public String processOutput(InputStream stdout) {
try {
img = ImageIO.read(stdout);
} catch (IOException ex) {
return "Unable to create PNG image: "+ex.getMessage();
}
if (img==null) return "Unable to create image from the gnuplot output. Null image created.";
return null;
}
COM: <s> read the produced image from gnuplot standard output </s>
|
funcom_train/44466762 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public Icon getIcon(){
if(getViewedObject()==null){
return getViewer().getIconFactory().getSystemIcon(IconFactory.SYSTEM_ICON_MISSING_16);
}else{
return getViewer().getIconFactory().getIconForClass(getViewedObject().getClass());
}
}
COM: <s> returns the icon returned by the icon factory for the class of the </s>
|
funcom_train/21998732 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private QuoteTimeSeries getDayVolume() {
if (dayVolumeGraphSource == null) {
dayVolumeGraphSource = quoteDatasetBundle.getQuoteDataset(contractCounter)
.getVolumeTimeSeries();
}
// else {
// dayVolumeGraphSource = new
// GraphableQuoteFunctionSource(OHLCVQuoteDataset.getQuoteDataset(quoteBundle,
// Quote.DAY_VOLUME));
// }
return dayVolumeGraphSource;
}
COM: <s> returns day volume graph xyplot source for input to graph xyplot </s>
|
funcom_train/18111853 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private JButton getToolMoveUpButton() {
if (toolMoveUpButton == null) {
toolMoveUpButton = new JButton();
toolMoveUpButton.setIcon(new ImageIcon(getClass().getResource("/icons/moveup.gif")));
toolMoveUpButton.setToolTipText("Move up");
toolMoveUpButton.setDisabledIcon(new ImageIcon(getClass().getResource("/icons/moveup_disabled.gif")));
toolMoveUpButton.setPreferredSize(new java.awt.Dimension(20,20));
toolMoveUpButton.addActionListener(this);
}
return toolMoveUpButton;
}
COM: <s> this method initializes tool move up button </s>
|
funcom_train/40616082 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public int readInt() {
byte[] buff = data;
int x = (buff[pos] << 24) + ((buff[pos+1] & 0xff) << 16) + ((buff[pos+2] & 0xff) << 8) + (buff[pos+3] & 0xff);
pos += 4;
return x;
}
COM: <s> read an integer at the current position </s>
|
funcom_train/8437011 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testAddNonOccInstance() {
System.out.println("addNonOccInstance");
String relation = "relation";
String term1 = "term1";
String term2 = "term2";
DataSet instance = new DataSet(termList);
instance.prepRelation(relation, atts.iterator());
instance.addNonOccInstance(relation, term1, term2);
}
COM: <s> test of add non occ instance method of class nii </s>
|
funcom_train/36987431 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: protected Renderer createRenderer(Graphics g) {
((Graphics2D) g).setRenderingHint(RenderingHints.KEY_ANTIALIASING,
_antiAliasing ? RenderingHints.VALUE_ANTIALIAS_ON
: RenderingHints.VALUE_ANTIALIAS_OFF);
((Graphics2D) g).setTransform(_transformation);
return ((Graphics2DRenderer) Factory.create(_renderer))
.init((Graphics2D) g);
}
COM: <s> creates an instance of </s>
|
funcom_train/130211 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void resetOdometry () {
try {
sendHeader (PLAYER_MSGTYPE_REQ, 1); /* 1 byte payload */
os.writeByte (PLAYER_POSITION3D_RESET_ODOM_REQ);
os.flush ();
} catch (Exception e) {
System.err.println ("[Position3D] : Couldn't send " +
"PLAYER_POSITION3D_RESET_ODOM_REQ command: " + e.toString ());
}
}
COM: <s> configuration request reset odometry </s>
|
funcom_train/8662630 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public int addLoadParameters(CtClass[] params, int offset) {
int stacksize = 0;
if (params != null) {
int n = params.length;
for (int i = 0; i < n; ++i)
stacksize += addLoad(stacksize + offset, params[i]);
}
return stacksize;
}
COM: <s> appends instructions for loading all the parameters onto the </s>
|
funcom_train/9409432 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testGetWriteHoldCount() {
ReentrantReadWriteLock lock = new ReentrantReadWriteLock();
for(int i = 1; i <= SIZE; i++) {
lock.writeLock().lock();
assertEquals(i,lock.getWriteHoldCount());
}
for(int i = SIZE; i > 0; i--) {
lock.writeLock().unlock();
assertEquals(i-1,lock.getWriteHoldCount());
}
}
COM: <s> get write hold count returns number of recursive holds </s>
|
funcom_train/7387628 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void redraw(mxCellState state) {
if (state != null) {
Rectangle dirty = state.getBoundingBox().getRectangle();
repaintTripleBuffer(new Rectangle(dirty));
dirty = SwingUtilities.convertRectangle(graphControl, dirty, this);
repaint(dirty);
}
}
COM: <s> updates the buffer if one exists and repaints the given cell state </s>
|
funcom_train/48401264 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void setGraphics(Graphics graphics) {
this.graphics = graphics;
// Calculate column widths and row height at 100% zoom
int numColumns = getColumnCount();
columnWidths = new int[columns.size()];
for(int c = 0; c < numColumns; c++) {
columnWidths[c] = getColumnWidth(graphics, c) + (2 * xPadding);
}
rowHeight = graphics.getFontMetrics().getHeight() + (2 * yPadding);
}
COM: <s> sets the graphics object </s>
|
funcom_train/4364296 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private boolean startsWithStringArray(String sArray[], String value) {
if (value == null)
return false;
for (int i = 0; i < sArray.length; i++) {
if (value.startsWith(sArray[i])) {
return true;
}
}
return false;
}
COM: <s> checks if any entry in the string array starts with the specified value </s>
|
funcom_train/12097738 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private void readLine() throws EOFException, IOException {
if (line == null) {
line = m_reader.readLine(); /*
* this strips platform specific line
* ending
*/
if (line == null) {
/* null means EOF, yet another inconsistent Java convention. */
throw new EOFException();
} else {
line += '\n'; /* apply standard line end for parser to find */
lineCount++;
}
}
} // end of readLine
COM: <s> make sure a line is available for parsing </s>
|
funcom_train/50487441 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void sampleActionToAll() {
// Perform the action on this component here
// Call each sub-component to perform the same action
Element subComponent;
Iterator it = getSubComponentIterator();
while (it.hasNext()) {
subComponent = (Element)it.next();
subComponent.sampleActionToAll();
}
}
COM: <s> perform action on component and its children </s>
|
funcom_train/5395856 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testReadUnsignedShort() throws Exception {
System.out.println("readUnsignedShort");
BlockDataInputStream instance = null;
int expResult = 0;
int result = instance.readUnsignedShort();
assertEquals(expResult, result);
// TODO review the generated test code and remove the default call to fail.
fail("The test case is a prototype.");
}
COM: <s> test of read unsigned short method of class org </s>
|
funcom_train/34526317 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void removeFragments(List<Integer> toBeRemoved) {
// remove fragment descriptors
List<DocumentFragmentDesc> list1 = new LinkedList<DocumentFragmentDesc>();
for (Integer idx : toBeRemoved) {
if (idx < fragmentDescriptors.size()) {
list1.add(fragmentDescriptors.get(idx));
}
}
fragmentDescriptors.removeAll(list1);
// remove fragments
List<Document> list2 = new LinkedList<Document>();
for (Integer idx : toBeRemoved) {
if (idx < fragments.size()) {
list2.add(fragments.get(idx));
}
}
fragments.removeAll(list2);
}
COM: <s> removes the fragments located at the specified indexes </s>
|
funcom_train/18745282 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private void removeFromNodeOutEdgeMap(Map<N,Set<E>> currentMap, E edge) {
if (currentMap != null) {
Set<E> edgeSet = currentMap.get(edge.source());
if (edgeSet != null) {
edgeSet.remove(edge);
}
}
}
COM: <s> removes an outgoing edge from a given node to edgeset mapping </s>
|
funcom_train/10644094 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void setPosition(final Component c, final int position) {
int layer = getLayer(c);
int index = getIndexOf(c);
if (index == -1) {
// do nothing if c is not in the container
return;
}
setLayer(c, layer, position);
}
COM: <s> sets the position of the component inside its layer </s>
|
funcom_train/15406292 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public String toStringFormat() {
if (list.isEmpty()) {
return null;
}
StringBuilder sb = new StringBuilder();
for (int i = 0; i < list.size(); i++) {
Property property = list.get(i);
if (i > 0) {
sb.append(", ");
}
sb.append(property.toStringFormat());
}
return sb.toString();
}
COM: <s> returns the order by in string format </s>
|
funcom_train/10616966 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testSignerStringIdentityScope() throws Exception {
Signer s = new SignerStub("sss4", IdentityScope.getSystemScope());
assertNotNull(s);
assertEquals("sss4", s.getName());
assertSame(IdentityScope.getSystemScope(), s.getScope());
assertNull(s.getPrivateKey());
}
COM: <s> verify signer string identity scope creates instance </s>
|
funcom_train/10977727 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public String getOnsubmit() {
if (this.onsubmit != null) {
return (this.onsubmit);
}
ValueBinding vb = getValueBinding("onsubmit");
if (vb != null) {
return ((String) vb.getValue(getFacesContext()));
} else {
return (null);
}
}
COM: <s> p return the java script to execute on form submit </s>
|
funcom_train/12178582 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testGetValue() throws Exception {
doTestGetValue(StyleValueFactory.getDefaultInstance().getLength(
null, 1.3, LengthUnit.PX), "1");
doTestGetValue(FontSizeKeywords.XX_SMALL, null);
doTestGetValue(StyleValueFactory.getDefaultInstance().getLength(
null, 1.44, LengthUnit.EM), null);
}
COM: <s> test the get line height method </s>
|
funcom_train/9994179 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testCommandAction() throws AssertionFailedException {
System.out.println("commandAction");
Editor instance = null;
Command c_1 = null;
Displayable d_1 = null;
instance.commandAction(c_1, d_1);
fail("The test case is a prototype.");
}
COM: <s> test of test command action method of class editor </s>
|
funcom_train/16794913 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void autoOutline(int startX, int startY, double lower, double upper, int mode) {
lowerThreshold = (float)lower;
upperThreshold = (float)upper;
autoOutline(startX, startY, 0.0, mode|THRESHOLDED_MODE);
}
COM: <s> traces an object defined by lower and upper threshold values </s>
|
funcom_train/32776840 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public boolean insert(Signal signal) {
int i = -1;
if (isEmpty()) {
this.queue.add(signal);
i = 0;
} else {
i = Collections.binarySearch(queue, signal,
signalIdentityComparator);
if (i < 0) {
i = -(i + 1); // Index to insert signal at
queue.add(i, signal);
}
}
return (i == 0); // returns true if s was inserted as first element
}
COM: <s> inserts a signal in the queue sorted in time ascending order </s>
|
funcom_train/47021289 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public Command getExitLoadingPage() {
if (exitLoadingPage == null) {//GEN-END:|143-getter|0|143-preInit
// write pre-init user code here
exitLoadingPage = new Command(getLocalizedString("Cancel"), Command.CANCEL, 1);//GEN-LINE:|143-getter|1|143-postInit
// write post-init user code here
}//GEN-BEGIN:|143-getter|2|
return exitLoadingPage;
}
COM: <s> returns an initiliazed instance of exit loading page component </s>
|
funcom_train/2369681 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void removeEntry(final RepositoryEntry entry) {
if (this.dataTable.containsKey(entry.getKey())) {
final RepositoryEntry reallyRemoved =
this.dataTable.remove(entry.getKey());
synchronized (this.listener) {
for (final RepositoryListener current : this.listener) {
current.entryRemoved(this, reallyRemoved);
}
}
}
}
COM: <s> removes an entry </s>
|
funcom_train/28171131 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void testGetCenter() {
System.out.println("getCenter");
BezierPath instance = new BezierPath();
Point2D.Double expResult = null;
Point2D.Double result = instance.getCenter();
assertEquals(expResult, result);
// TODO review the generated test code and remove the default call to fail.
fail("The test case is a prototype.");
}
COM: <s> test of get center method of class org </s>
|
funcom_train/15453696 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public boolean isAccessGranted(Set levels) {
boolean granted = !isRestricted();
if (levels != null && !granted) {
Iterator itLevels = levels.iterator();
while (itLevels.hasNext() && !granted){
AccessLevel accessLevel = (AccessLevel) itLevels.next();
granted = accessLevels.contains(accessLevel);
}
}
return granted;
}
COM: <s> verify when one of the access levels has granted access to this functionality </s>
|
funcom_train/1676060 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private boolean setTargetBin() {
targetBin = null;
targetIndex = 0;
boolean isDup = (dupBin != null);
dupKey = null;
if (isDup) {
targetBin = dupBin;
targetIndex = dupIndex;
dupKey = dupBin.getDupKey();
} else {
targetBin = bin;
targetIndex = index;
}
return isDup;
}
COM: <s> figure out which bin index set to use </s>
|
funcom_train/23711378 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private void display_session_id(SSL ssl)
{
byte[] session_id = ssl.getSessionId();
if (session_id.length > 0)
{
System.out.println("-----BEGIN SSL SESSION PARAMETERS-----");
bytesToHex(session_id);
System.out.println("-----END SSL SESSION PARAMETERS-----");
}
}
COM: <s> display what session id we have </s>
|
funcom_train/22404007 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void setWidth(String width) {
// This exists to deal with an inconsistency in IE's implementation where
// it won't accept negative numbers in length measurements
assert extractLengthValue(width.trim().toLowerCase()) >= 0 :
"CSS widths should not be negative";
DOM.setStyleAttribute(element, "width", width);
}
COM: <s> sets the objects width </s>
|
funcom_train/42775429 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void send(MidiMessage message, long timeStamp) {
ShortMessage sm = (ShortMessage)message;
try{
midiEventsModel.add(new MIDIEvent(timeStamp, sm.getCommand(), sm.getData1(), sm.getData2(), sm.getChannel()));
}
catch(InvalidMidiDataException ex){
MsgHandler.error(ex.getMessage());
ex.printStackTrace();
}
}
COM: <s> called when the receiver receives a midi message </s>
|
funcom_train/39138399 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public int compareTo(Object o) {
if (o == null) {
throw new NullPointerException("compared object is null");
}
if (o instanceof InlineProperties) {
return ((InlineProperties) o).getPreference() - getPreference();
} else {
throw new ClassCastException("compared object is not a "
+ InlineProperties.class);
}
}
COM: <s> compares this object with the specified object for order </s>
|
funcom_train/19245025 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void addPredicate(final int size, final Predicate predicate) {
if (getPredicateSize(size) == 0) {
if (predicatePool.size() <= size) {
for (int i = predicatePool.size(); i <= size; i++) {
predicatePool.add(new ArrayList());
}
}
}
List list = (List) predicatePool.get(size);
list.add(predicate);
}
COM: <s> add a predicate for interpreting predicate variables </s>
|
funcom_train/8632657 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void accept(ISourceType[] sourceTypes, PackageBinding packageBinding, AccessRestriction accessRestriction) {
this.problemReporter.abortDueToInternalError(
Messages.bind(Messages.abort_againstSourceModel, new String[] { String.valueOf(sourceTypes[0].getName()), String.valueOf(sourceTypes[0].getFileName()) }));
}
COM: <s> add additional source types </s>
|
funcom_train/4540534 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void resetRowId() throws HsqlException {
if (isCached &&!isText) {
return;
}
rowIdSequence = new NumberSequence(null, 0, 1, Types.BIGINT);
RowIterator it = rowIterator(null);
while (it.hasNext()) {
Row row = it.next();
int pos = (int) rowIdSequence.getValue();
row.setPos(pos);
}
}
COM: <s> necessary when over integer </s>
|
funcom_train/48463138 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void setActiveDiagramPanel(String diagramFilePath) {
if (diagramFilePath == null)
return;
JTabbedPane tp = getTabbedPane();
Component[] components = tp.getComponents();
for (int i = 0; i < components.length; i++) {
if (components[i] instanceof DiagramPanel) {
DiagramPanel dPanel = (DiagramPanel) components[i];
String filePath = dPanel.getFilePath();
if (diagramFilePath.equals(filePath)) {
tp.setSelectedComponent(dPanel);
return;
}
}
}
}
COM: <s> looks for an opened diagram from its file path and focus it </s>
|
funcom_train/1104190 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: protected void addMindegerPropertyDescriptor(Object object) {
itemPropertyDescriptors.add
(createItemPropertyDescriptor
(((ComposeableAdapterFactory)adapterFactory).getRootAdapterFactory(),
getResourceLocator(),
getString("_UI_Alan_mindeger_feature"),
getString("_UI_PropertyDescriptor_description", "_UI_Alan_mindeger_feature", "_UI_Alan_type"),
HarzemliPackage.eINSTANCE.getAlan_Mindeger(),
true,
false,
false,
ItemPropertyDescriptor.GENERIC_VALUE_IMAGE,
getString("_UI_validasyonPropertyCategory"),
null));
}
COM: <s> this adds a property descriptor for the mindeger feature </s>
|
funcom_train/47022139 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public Command getOkCommand1() {
if (okCommand1 == null) {//GEN-END:|207-getter|0|207-preInit
// write pre-init user code here
okCommand1 = new Command(getLocalizedString("More Info"), Command.OK, 0);//GEN-LINE:|207-getter|1|207-postInit
// write post-init user code here
}//GEN-BEGIN:|207-getter|2|
return okCommand1;
}
COM: <s> returns an initiliazed instance of ok command1 component </s>
|
funcom_train/38552291 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public void resetTimer(long timerTime) {
if(timerTime < 1) {
throw new Cube42IllegalArgumentException(
ThreadSystemCodes.TIMER_THREAD_TIME_TO_SMALL,
new Object[] {new Long(timerTime)});
} else {
this.timing = true;
this.timerTime = timerTime;
this.thread.interrupt();
}
}
COM: <s> resets the timer on the thread </s>
|
funcom_train/45935960 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: protected void navWithinPage() {
List<String> letters = new Vector<String>();
String letterLink;
for (Object letter : CONF.indexBuilder.elements()) {
letterLink =
(curLetter.equals(letter))
? letter.toString()
: linkToLabelHref(letter.toString(), "index-"
+ letter + CONF.ext);
letters.add(letterLink);
}
print(open("td id=\"WithinPage\""));
printUnorderedListWithLast(letters);
println(close("td"));
}
COM: <s> creates links to index pages for each letter with documented symbols </s>
|
funcom_train/36149693 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public double density(double x) {
if (x <= 0)
return 0;
return Math.pow(0.5, v/2) / Math.exp(SpecialFunctions.gammln(v/2)) *
Math.pow(x, v/2 - 1) * Math.exp(-x/2);
}
COM: <s> returns the density of the distribution at x </s>
|
funcom_train/5735687 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public boolean logout() throws LoginException {
if (subject.isReadOnly()) {
cleanState();
throw new LoginException ("Subject is read-only");
}
Set principals = subject.getPrincipals();
principals.remove(x500Principal);
principals.remove(userPrincipal);
if (authzIdentity != null) {
principals.remove(authzPrincipal);
}
// clean out state
cleanState();
succeeded = false;
commitSucceeded = false;
x500Principal = null;
userPrincipal = null;
authzPrincipal = null;
if (debug) {
System.out.println("\t\t[LdapLoginModule] logged out Subject");
}
return true;
}
COM: <s> logout a user </s>
|
funcom_train/4285007 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: public boolean checkPatternExists(RelationCallExp relationCallExp, DiagnosticChain diagnostics, Map<Object, Object> context) {
Pattern pattern = getPattern(relationCallExp);
if (pattern != null)
return true;
Object[] messageSubstitutions = new Object[] { getObjectLabel(relationCallExp, context) };
appendError(diagnostics, relationCallExp, QVTRelationMessages._UI_RelationCallExp_PatternDoesNotExist, messageSubstitutions);
return false;
}
COM: <s> validates the pattern exists constraint of em relation call exp em </s>
|
funcom_train/3337783 | /tmp/hf-datasets-cache/medium/datasets/31837353763449-config-parquet-and-info-apcl-funcom-java-long-1b0b1ae9/downloads/d42b7d3130dd02820b64692a8810efdf479c66e589141ea4cfe3cb3bba421716 | TDAT: private InputStream openFileStream(File file) {
InputStream ret = null;
if (file.getName().equals("-")) {
ret = stdin;
} else {
ret = IOUtils.openInputStream(file);
if (ret == null) {
err.format(ERR_FILE, file);
}
}
return ret;
}
COM: <s> attempt to open a file writing an error message on failure </s>
|
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