Stack-CellxGene45M / README.md
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metadata
license: cc-by-4.0
tags:
  - single-cell
  - scRNA-seq
  - genomics

CellxGene 45M Collection

A curated subset of CellxGene (~45M cells) used to align the Stack model after pretraining on full human scBaseCount.

Selection Criteria

  • ≥ 50,000 cells per dataset
  • ≥ 5 donors per dataset

Cell Type Annotations

Author-annotated coarse-grained cell type labels were heuristically identified and transferred to adata.obs["author_cell_type"].