repo
stringlengths
7
54
path
stringlengths
4
223
func_name
stringlengths
1
134
original_string
stringlengths
75
104k
language
stringclasses
1 value
code
stringlengths
75
104k
code_tokens
listlengths
20
28.4k
docstring
stringlengths
1
46.3k
docstring_tokens
listlengths
1
1.66k
sha
stringlengths
40
40
url
stringlengths
87
315
partition
stringclasses
1 value
summary
stringlengths
4
350
obf_code
stringlengths
7.85k
764k
opencobra/memote
memote/support/basic.py
find_ngam
def find_ngam(model): u""" Return all potential non growth-associated maintenance reactions. From the list of all reactions that convert ATP to ADP select the reactions that match a defined reaction string and whose metabolites are situated within the main model compartment. The main model compartment is the cytosol, and if that cannot be identified, the compartment with the most metabolites. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list Reactions that qualify as non-growth associated maintenance reactions. Notes ----- [1]_ define the non-growth associated maintenance (NGAM) as the energy required to maintain all constant processes such as turgor pressure and other housekeeping activities. In metabolic models this is expressed by requiring a simple ATP hydrolysis reaction to always have a fixed minimal amount of flux. This value can be measured as described by [1]_ . References ---------- .. [1] Thiele, I., & Palsson, B. Ø. (2010, January). A protocol for generating a high-quality genome-scale metabolic reconstruction. Nature protocols. Nature Publishing Group. http://doi.org/10.1038/nprot.2009.203 """ atp_adp_conv_rxns = helpers.find_converting_reactions( model, ("MNXM3", "MNXM7") ) id_of_main_compartment = helpers.find_compartment_id_in_model(model, 'c') reactants = { helpers.find_met_in_model(model, "MNXM3", id_of_main_compartment)[0], helpers.find_met_in_model(model, "MNXM2", id_of_main_compartment)[0] } products = { helpers.find_met_in_model(model, "MNXM7", id_of_main_compartment)[0], helpers.find_met_in_model(model, "MNXM1", id_of_main_compartment)[0], helpers.find_met_in_model(model, "MNXM9", id_of_main_compartment)[0] } candidates = [rxn for rxn in atp_adp_conv_rxns if rxn.reversibility is False and set(rxn.reactants) == reactants and set(rxn.products) == products] buzzwords = ['maintenance', 'atpm', 'requirement', 'ngam', 'non-growth', 'associated'] refined_candidates = [rxn for rxn in candidates if any( string in filter_none(rxn.name, '').lower() for string in buzzwords )] if refined_candidates: return refined_candidates else: return candidates
python
def find_ngam(model): u""" Return all potential non growth-associated maintenance reactions. From the list of all reactions that convert ATP to ADP select the reactions that match a defined reaction string and whose metabolites are situated within the main model compartment. The main model compartment is the cytosol, and if that cannot be identified, the compartment with the most metabolites. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list Reactions that qualify as non-growth associated maintenance reactions. Notes ----- [1]_ define the non-growth associated maintenance (NGAM) as the energy required to maintain all constant processes such as turgor pressure and other housekeeping activities. In metabolic models this is expressed by requiring a simple ATP hydrolysis reaction to always have a fixed minimal amount of flux. This value can be measured as described by [1]_ . References ---------- .. [1] Thiele, I., & Palsson, B. Ø. (2010, January). A protocol for generating a high-quality genome-scale metabolic reconstruction. Nature protocols. Nature Publishing Group. http://doi.org/10.1038/nprot.2009.203 """ atp_adp_conv_rxns = helpers.find_converting_reactions( model, ("MNXM3", "MNXM7") ) id_of_main_compartment = helpers.find_compartment_id_in_model(model, 'c') reactants = { helpers.find_met_in_model(model, "MNXM3", id_of_main_compartment)[0], helpers.find_met_in_model(model, "MNXM2", id_of_main_compartment)[0] } products = { helpers.find_met_in_model(model, "MNXM7", id_of_main_compartment)[0], helpers.find_met_in_model(model, "MNXM1", id_of_main_compartment)[0], helpers.find_met_in_model(model, "MNXM9", id_of_main_compartment)[0] } candidates = [rxn for rxn in atp_adp_conv_rxns if rxn.reversibility is False and set(rxn.reactants) == reactants and set(rxn.products) == products] buzzwords = ['maintenance', 'atpm', 'requirement', 'ngam', 'non-growth', 'associated'] refined_candidates = [rxn for rxn in candidates if any( string in filter_none(rxn.name, '').lower() for string in buzzwords )] if refined_candidates: return refined_candidates else: return candidates
[ "def", "find_ngam", "(", "model", ")", ":", "atp_adp_conv_rxns", "=", "helpers", ".", "find_converting_reactions", "(", "model", ",", "(", "\"MNXM3\"", ",", "\"MNXM7\"", ")", ")", "id_of_main_compartment", "=", "helpers", ".", "find_compartment_id_in_model", "(", "model", ",", "'c'", ")", "reactants", "=", "{", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM3\"", ",", "id_of_main_compartment", ")", "[", "0", "]", ",", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM2\"", ",", "id_of_main_compartment", ")", "[", "0", "]", "}", "products", "=", "{", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM7\"", ",", "id_of_main_compartment", ")", "[", "0", "]", ",", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM1\"", ",", "id_of_main_compartment", ")", "[", "0", "]", ",", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM9\"", ",", "id_of_main_compartment", ")", "[", "0", "]", "}", "candidates", "=", "[", "rxn", "for", "rxn", "in", "atp_adp_conv_rxns", "if", "rxn", ".", "reversibility", "is", "False", "and", "set", "(", "rxn", ".", "reactants", ")", "==", "reactants", "and", "set", "(", "rxn", ".", "products", ")", "==", "products", "]", "buzzwords", "=", "[", "'maintenance'", ",", "'atpm'", ",", "'requirement'", ",", "'ngam'", ",", "'non-growth'", ",", "'associated'", "]", "refined_candidates", "=", "[", "rxn", "for", "rxn", "in", "candidates", "if", "any", "(", "string", "in", "filter_none", "(", "rxn", ".", "name", ",", "''", ")", ".", "lower", "(", ")", "for", "string", "in", "buzzwords", ")", "]", "if", "refined_candidates", ":", "return", "refined_candidates", "else", ":", "return", "candidates" ]
u""" Return all potential non growth-associated maintenance reactions. From the list of all reactions that convert ATP to ADP select the reactions that match a defined reaction string and whose metabolites are situated within the main model compartment. The main model compartment is the cytosol, and if that cannot be identified, the compartment with the most metabolites. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list Reactions that qualify as non-growth associated maintenance reactions. Notes ----- [1]_ define the non-growth associated maintenance (NGAM) as the energy required to maintain all constant processes such as turgor pressure and other housekeeping activities. In metabolic models this is expressed by requiring a simple ATP hydrolysis reaction to always have a fixed minimal amount of flux. This value can be measured as described by [1]_ . References ---------- .. [1] Thiele, I., & Palsson, B. Ø. (2010, January). A protocol for generating a high-quality genome-scale metabolic reconstruction. Nature protocols. Nature Publishing Group. http://doi.org/10.1038/nprot.2009.203
[ "u", "Return", "all", "potential", "non", "growth", "-", "associated", "maintenance", "reactions", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L81-L148
train
u Return all potential non growth - associated maintenance reactions.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(720 - 609) + chr(0b1110 + 0o44) + chr(0b1101 + 0o46) + '\067', ord("\x08")), nzTpIcepk0o8(chr(48 - 0) + chr(868 - 757) + chr(2133 - 2084) + chr(0b110000) + '\062', 0b1000), nzTpIcepk0o8(chr(0b100 + 0o54) + chr(0b1011011 + 0o24) + '\x33' + chr(0b10111 + 0o34) + chr(0b110000 + 0o3), ord("\x08")), nzTpIcepk0o8(chr(1679 - 1631) + '\x6f' + chr(1603 - 1554) + chr(0b10111 + 0o32), 30111 - 30103), nzTpIcepk0o8('\060' + chr(0b1001011 + 0o44) + chr(0b110010) + chr(336 - 288) + chr(54), 55968 - 55960), nzTpIcepk0o8(chr(915 - 867) + chr(0b1101111) + '\062' + '\x33' + '\060', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110001) + chr(0b110111) + chr(0b110001), 42571 - 42563), nzTpIcepk0o8(chr(0b11 + 0o55) + chr(111) + chr(472 - 418) + chr(2465 - 2414), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(9801 - 9690) + '\066' + chr(53), 0o10), nzTpIcepk0o8('\x30' + chr(0b111 + 0o150) + '\066' + chr(0b100001 + 0o26), 0o10), nzTpIcepk0o8('\060' + chr(111) + '\x32' + chr(0b110100) + chr(2292 - 2243), 61957 - 61949), nzTpIcepk0o8(chr(48) + chr(0b1000011 + 0o54) + '\x31' + '\064' + chr(52), 0b1000), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(0b1101111) + '\x33' + '\x34' + chr(51), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\061' + chr(55) + '\x36', 0o10), nzTpIcepk0o8(chr(0b11111 + 0o21) + chr(0b11 + 0o154) + chr(0b110110), 51445 - 51437), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(0b101101 + 0o102) + '\061' + chr(51) + chr(0b1010 + 0o54), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b11101 + 0o26) + '\063' + chr(54), ord("\x08")), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(0b1100111 + 0o10) + '\x31' + chr(48) + chr(48), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1100000 + 0o17) + '\x31' + '\x30' + chr(589 - 539), 8), nzTpIcepk0o8(chr(2066 - 2018) + chr(2069 - 1958) + '\x32' + '\061' + chr(1093 - 1040), 20658 - 20650), nzTpIcepk0o8('\060' + chr(0b1101111) + '\061' + '\x30' + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(0b10010 + 0o36) + chr(111) + chr(0b110001) + '\066' + '\x33', 0o10), nzTpIcepk0o8(chr(909 - 861) + '\157' + '\061' + chr(0b110010) + chr(0b110110), 0b1000), nzTpIcepk0o8('\060' + chr(0b100100 + 0o113) + '\x34' + chr(0b10110 + 0o37), ord("\x08")), nzTpIcepk0o8(chr(1026 - 978) + chr(111) + '\061' + chr(0b11 + 0o62) + chr(55), 0o10), nzTpIcepk0o8('\060' + chr(0b10 + 0o155) + chr(0b1100 + 0o46) + '\x36' + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(0b10011 + 0o35) + '\157' + chr(0b110011) + chr(55) + '\067', ord("\x08")), nzTpIcepk0o8(chr(0b11011 + 0o25) + '\157' + chr(1376 - 1327) + chr(1766 - 1712) + chr(506 - 457), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(0b10100 + 0o35) + chr(1530 - 1482) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(346 - 298) + chr(0b1101111) + chr(0b11110 + 0o25) + '\061' + chr(2090 - 2036), 0b1000), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(0b1101111) + chr(1108 - 1058) + chr(1859 - 1809) + chr(54), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + '\065' + chr(691 - 637), 0o10), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(0b1011111 + 0o20) + chr(0b110 + 0o61) + '\x33', 65371 - 65363), nzTpIcepk0o8(chr(372 - 324) + chr(0b1101111) + '\x33' + chr(2567 - 2514), 0b1000), nzTpIcepk0o8(chr(0b100110 + 0o12) + chr(0b1101111) + chr(50) + chr(1542 - 1492), 37436 - 37428), nzTpIcepk0o8(chr(0b100001 + 0o17) + '\157' + '\062' + chr(0b11010 + 0o30), 8), nzTpIcepk0o8('\x30' + '\157' + chr(49) + chr(0b110001) + chr(0b1010 + 0o50), 17096 - 17088), nzTpIcepk0o8(chr(2008 - 1960) + '\157' + chr(1232 - 1183) + chr(0b110100) + '\x36', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(10696 - 10585) + '\x35' + chr(54), 8), nzTpIcepk0o8('\x30' + '\x6f' + '\x32' + chr(1373 - 1322) + '\x34', 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(0b1001001 + 0o46) + chr(637 - 584) + chr(159 - 111), ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xb1'), chr(100) + chr(0b0 + 0o145) + '\143' + chr(111) + chr(8787 - 8687) + chr(101))('\165' + chr(0b10110 + 0o136) + chr(1721 - 1619) + chr(0b11110 + 0o17) + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def CNCOTO2rkdtz(KW0sEfjlgNpM): YbivCzlYraQZ = ofBs4ZktVP6z.find_converting_reactions(KW0sEfjlgNpM, (roI3spqORKae(ES5oEprVxulp(b'\xd2\x0c\x83D\xb5'), chr(6085 - 5985) + chr(0b1100101) + chr(0b10010 + 0o121) + '\157' + '\x64' + chr(101))(chr(117) + chr(0b11101 + 0o127) + '\146' + chr(1827 - 1782) + chr(0b101000 + 0o20)), roI3spqORKae(ES5oEprVxulp(b'\xd2\x0c\x83D\xb1'), '\144' + chr(5881 - 5780) + chr(0b1100011) + '\157' + chr(0b1100100) + chr(3483 - 3382))(chr(0b1010100 + 0o41) + chr(0b1110100) + '\146' + chr(1449 - 1404) + chr(56)))) EHtBTS01vrm7 = ofBs4ZktVP6z.find_compartment_id_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xfc'), '\144' + chr(101) + chr(0b1100011) + chr(3581 - 3470) + chr(0b1100100) + '\145')('\x75' + chr(116) + '\146' + chr(0b101101) + chr(0b10010 + 0o46))) GqPyK22ztGj6 = {ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xd2\x0c\x83D\xb5'), '\144' + chr(101) + chr(7339 - 7240) + chr(1125 - 1014) + chr(0b1100100) + chr(101))(chr(11255 - 11138) + chr(5465 - 5349) + '\146' + chr(576 - 531) + chr(56)), EHtBTS01vrm7)[nzTpIcepk0o8(chr(0b110000 + 0o0) + '\157' + chr(0b10110 + 0o32), 26288 - 26280)], ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xd2\x0c\x83D\xb4'), chr(0b1100100) + '\x65' + chr(0b1011010 + 0o11) + chr(111) + chr(0b10010 + 0o122) + '\145')(chr(117) + chr(0b1110100) + '\x66' + '\x2d' + chr(56)), EHtBTS01vrm7)[nzTpIcepk0o8(chr(498 - 450) + chr(111) + chr(1822 - 1774), 8)]} mRqOpoPWPHxj = {ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xd2\x0c\x83D\xb1'), '\x64' + chr(7487 - 7386) + '\x63' + '\157' + chr(4340 - 4240) + '\145')(chr(3437 - 3320) + '\164' + chr(0b110001 + 0o65) + '\055' + '\x38'), EHtBTS01vrm7)[nzTpIcepk0o8(chr(0b100111 + 0o11) + '\157' + chr(48), 8)], ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xd2\x0c\x83D\xb7'), chr(8089 - 7989) + chr(101) + chr(0b1100011) + '\157' + chr(2050 - 1950) + chr(0b1100101 + 0o0))('\x75' + chr(116) + chr(0b10101 + 0o121) + '\055' + chr(2249 - 2193)), EHtBTS01vrm7)[nzTpIcepk0o8(chr(0b110000) + chr(5636 - 5525) + chr(0b110000), 8)], ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xd2\x0c\x83D\xbf'), chr(9632 - 9532) + '\x65' + chr(0b1100011) + chr(9995 - 9884) + '\x64' + chr(101))(chr(11336 - 11219) + '\x74' + '\146' + '\055' + chr(1845 - 1789)), EHtBTS01vrm7)[nzTpIcepk0o8(chr(48) + '\157' + '\060', 8)]} FzWHNpnfM7HR = [cXXyzqlAJbZW for cXXyzqlAJbZW in YbivCzlYraQZ if cXXyzqlAJbZW.reversibility is nzTpIcepk0o8('\060' + '\x6f' + chr(1026 - 978), 8) and Bvi71nNyvlqO(cXXyzqlAJbZW.reactants) == GqPyK22ztGj6 and (Bvi71nNyvlqO(cXXyzqlAJbZW.mRqOpoPWPHxj) == mRqOpoPWPHxj)] iHDr61JSP9SZ = [roI3spqORKae(ES5oEprVxulp(b'\xf2#\xb2g\xf2\xfd\x17R[T\xc4'), chr(0b1100100) + chr(1601 - 1500) + chr(4785 - 4686) + chr(0b1101111) + chr(0b100110 + 0o76) + '\145')(chr(0b1110101) + chr(0b1110100) + chr(7432 - 7330) + '\x2d' + '\070'), roI3spqORKae(ES5oEprVxulp(b'\xfe6\xabd'), chr(100) + chr(0b111001 + 0o54) + chr(0b1100011) + '\x6f' + '\x64' + chr(0b1100101))(chr(0b111101 + 0o70) + chr(0b1 + 0o163) + chr(0b1100110) + chr(0b100000 + 0o15) + chr(56)), roI3spqORKae(ES5oEprVxulp(b"\xed'\xaa|\xef\xea\x1c^PY\xd5"), chr(0b1010010 + 0o22) + chr(101) + chr(4935 - 4836) + chr(111) + chr(7560 - 7460) + chr(0b1110 + 0o127))(chr(0b11 + 0o162) + chr(116) + chr(4208 - 4106) + '\055' + chr(56)), roI3spqORKae(ES5oEprVxulp(b'\xf1%\xbad'), chr(100) + chr(0b1100101) + '\143' + '\x6f' + chr(0b1100100) + chr(0b1001000 + 0o35))(chr(0b1110101) + chr(0b1110100) + '\x66' + '\055' + '\070'), roI3spqORKae(ES5oEprVxulp(b'\xf1-\xb5$\xe1\xea\x16DA_'), chr(100) + chr(0b1100101) + chr(0b1100010 + 0o1) + chr(111) + '\x64' + chr(6418 - 6317))(chr(0b1110101) + chr(0b1010101 + 0o37) + chr(0b1100110) + chr(0b101 + 0o50) + chr(3123 - 3067)), roI3spqORKae(ES5oEprVxulp(b'\xfe1\xa8f\xe5\xf1\x18GPS'), chr(0b1100100) + chr(0b1100101) + chr(1578 - 1479) + chr(111) + '\144' + chr(0b11101 + 0o110))(chr(117) + '\164' + chr(0b1100110) + chr(1325 - 1280) + chr(0b100001 + 0o27))] FdcIarW7CQCS = [cXXyzqlAJbZW for cXXyzqlAJbZW in FzWHNpnfM7HR if VF4pKOObtlPc((aji3jF4_nqWL in K3DkpuzgwuW3(cXXyzqlAJbZW.name, roI3spqORKae(ES5oEprVxulp(b''), chr(0b101110 + 0o66) + '\x65' + chr(0b1000100 + 0o37) + chr(0b111101 + 0o62) + chr(0b1100100) + chr(0b1100101))('\x75' + '\164' + chr(5673 - 5571) + chr(0b101010 + 0o3) + chr(0b10 + 0o66))).Xn8ENWMZdIRt() for aji3jF4_nqWL in iHDr61JSP9SZ))] if FdcIarW7CQCS: return FdcIarW7CQCS else: return FzWHNpnfM7HR
opencobra/memote
memote/support/basic.py
calculate_metabolic_coverage
def calculate_metabolic_coverage(model): u""" Return the ratio of reactions and genes included in the model. Determine whether the amount of reactions and genes in model not equal to zero, then return the ratio. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- float The ratio of reactions to genes also called metabolic coverage. Raises ------ ValueError If the model does not contain either reactions or genes. Notes ----- According to [1]_ this is a good quality indicator expressing the degree of metabolic coverage i.e. modeling detail of a given reconstruction. The authors explain that models with a 'high level of modeling detail have ratios >1, and [models] with low level of detail have ratios <1'. They explain that 'this difference arises because [models] with basic or intermediate levels of detail often include many reactions in which several gene products and their enzymatic transformations are ‘lumped’'. References ---------- .. [1] Monk, J., Nogales, J., & Palsson, B. O. (2014). Optimizing genome-scale network reconstructions. Nature Biotechnology, 32(5), 447–452. http://doi.org/10.1038/nbt.2870 """ if len(model.reactions) == 0 or len(model.genes) == 0: raise ValueError("The model contains no reactions or genes.") return float(len(model.reactions)) / float(len(model.genes))
python
def calculate_metabolic_coverage(model): u""" Return the ratio of reactions and genes included in the model. Determine whether the amount of reactions and genes in model not equal to zero, then return the ratio. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- float The ratio of reactions to genes also called metabolic coverage. Raises ------ ValueError If the model does not contain either reactions or genes. Notes ----- According to [1]_ this is a good quality indicator expressing the degree of metabolic coverage i.e. modeling detail of a given reconstruction. The authors explain that models with a 'high level of modeling detail have ratios >1, and [models] with low level of detail have ratios <1'. They explain that 'this difference arises because [models] with basic or intermediate levels of detail often include many reactions in which several gene products and their enzymatic transformations are ‘lumped’'. References ---------- .. [1] Monk, J., Nogales, J., & Palsson, B. O. (2014). Optimizing genome-scale network reconstructions. Nature Biotechnology, 32(5), 447–452. http://doi.org/10.1038/nbt.2870 """ if len(model.reactions) == 0 or len(model.genes) == 0: raise ValueError("The model contains no reactions or genes.") return float(len(model.reactions)) / float(len(model.genes))
[ "def", "calculate_metabolic_coverage", "(", "model", ")", ":", "if", "len", "(", "model", ".", "reactions", ")", "==", "0", "or", "len", "(", "model", ".", "genes", ")", "==", "0", ":", "raise", "ValueError", "(", "\"The model contains no reactions or genes.\"", ")", "return", "float", "(", "len", "(", "model", ".", "reactions", ")", ")", "/", "float", "(", "len", "(", "model", ".", "genes", ")", ")" ]
u""" Return the ratio of reactions and genes included in the model. Determine whether the amount of reactions and genes in model not equal to zero, then return the ratio. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- float The ratio of reactions to genes also called metabolic coverage. Raises ------ ValueError If the model does not contain either reactions or genes. Notes ----- According to [1]_ this is a good quality indicator expressing the degree of metabolic coverage i.e. modeling detail of a given reconstruction. The authors explain that models with a 'high level of modeling detail have ratios >1, and [models] with low level of detail have ratios <1'. They explain that 'this difference arises because [models] with basic or intermediate levels of detail often include many reactions in which several gene products and their enzymatic transformations are ‘lumped’'. References ---------- .. [1] Monk, J., Nogales, J., & Palsson, B. O. (2014). Optimizing genome-scale network reconstructions. Nature Biotechnology, 32(5), 447–452. http://doi.org/10.1038/nbt.2870
[ "u", "Return", "the", "ratio", "of", "reactions", "and", "genes", "included", "in", "the", "model", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L151-L192
train
u Return the ratio of reactions and genes included in the given model.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(1127 - 1079) + chr(0b1100110 + 0o11) + chr(0b110010) + '\060' + chr(0b10 + 0o56), 0o10), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(3237 - 3126) + chr(53) + chr(0b100000 + 0o25), 0o10), nzTpIcepk0o8(chr(1125 - 1077) + chr(6748 - 6637) + chr(1994 - 1941) + chr(0b110 + 0o60), 54664 - 54656), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(149 - 99) + '\061' + chr(0b100100 + 0o20), 62464 - 62456), nzTpIcepk0o8(chr(48) + chr(0b1101101 + 0o2) + '\x31' + '\063' + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(51) + chr(670 - 622), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(1716 - 1666) + chr(55) + chr(52), 0b1000), nzTpIcepk0o8('\x30' + chr(2078 - 1967) + chr(55) + '\x37', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x32' + chr(52) + chr(1258 - 1208), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(49) + '\062', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(11754 - 11643) + '\x32' + '\x31' + chr(0b101 + 0o56), 61382 - 61374), nzTpIcepk0o8(chr(0b11100 + 0o24) + '\x6f' + chr(0b110001) + chr(0b110101) + chr(1066 - 1017), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x33' + chr(48) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(314 - 266) + chr(0b1101111 + 0o0) + chr(0b110001) + '\066' + '\067', ord("\x08")), nzTpIcepk0o8('\x30' + chr(5687 - 5576) + '\061' + '\061' + chr(0b101100 + 0o7), 16927 - 16919), nzTpIcepk0o8(chr(2178 - 2130) + chr(11895 - 11784) + chr(0b101011 + 0o6) + '\x34' + '\060', 57802 - 57794), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110001) + chr(51) + '\x37', 8), nzTpIcepk0o8(chr(0b110000) + chr(0b10000 + 0o137) + chr(2207 - 2156) + '\067' + chr(0b101111 + 0o6), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\062' + chr(51), 38784 - 38776), nzTpIcepk0o8('\060' + '\x6f' + chr(0b1100 + 0o46) + chr(0b110010) + chr(0b110101 + 0o2), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\062' + '\065' + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(841 - 793) + '\157' + chr(0b1 + 0o60) + chr(0b110010) + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b1101111) + chr(0b110001) + '\x36' + chr(0b100 + 0o56), 0b1000), nzTpIcepk0o8('\060' + chr(0b1001110 + 0o41) + chr(0b11 + 0o60) + chr(2570 - 2519) + chr(48), 8060 - 8052), nzTpIcepk0o8(chr(0b1011 + 0o45) + chr(111) + chr(803 - 752) + '\065' + chr(0b11111 + 0o21), 48517 - 48509), nzTpIcepk0o8(chr(48) + chr(111) + chr(2365 - 2315) + chr(0b10001 + 0o37) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(0b111 + 0o51) + chr(0b1101111) + chr(51) + chr(0b110110) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1010100 + 0o33) + chr(49) + '\x31' + chr(54), 0b1000), nzTpIcepk0o8('\060' + '\157' + '\x33' + chr(0b100011 + 0o24) + chr(52), 0b1000), nzTpIcepk0o8(chr(135 - 87) + chr(0b11111 + 0o120) + '\x32' + chr(2235 - 2185) + '\062', 0o10), nzTpIcepk0o8('\060' + chr(0b11100 + 0o123) + '\x32' + '\x32' + chr(0b110010), 8), nzTpIcepk0o8(chr(48) + chr(0b1101 + 0o142) + chr(0b110000 + 0o3) + chr(918 - 867) + chr(0b11001 + 0o34), 0o10), nzTpIcepk0o8('\x30' + chr(0b1010011 + 0o34) + chr(1460 - 1409) + chr(0b110101) + '\x33', 21500 - 21492), nzTpIcepk0o8(chr(0b110000) + chr(0b100111 + 0o110) + chr(0b110001), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b11111 + 0o25) + '\060', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(3573 - 3462) + '\062' + '\064' + chr(0b110011), 0o10), nzTpIcepk0o8(chr(1609 - 1561) + chr(0b1101111) + chr(490 - 439) + chr(723 - 669) + chr(484 - 433), 0b1000), nzTpIcepk0o8(chr(1530 - 1482) + chr(9997 - 9886) + '\x32' + chr(0b110000) + chr(1613 - 1565), 8), nzTpIcepk0o8(chr(48) + '\x6f' + '\061' + chr(48) + chr(0b110000), 57959 - 57951), nzTpIcepk0o8(chr(48) + chr(281 - 170) + chr(0b101011 + 0o6) + '\061' + '\061', ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(0b1100 + 0o143) + chr(53) + '\x30', 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xae'), chr(0b1100100) + chr(2181 - 2080) + chr(9407 - 9308) + chr(0b110101 + 0o72) + chr(9477 - 9377) + '\145')('\x75' + '\164' + chr(4900 - 4798) + chr(0b101101) + chr(0b1110 + 0o52)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def LQZGcXUZr0AO(KW0sEfjlgNpM): if ftfygxgFas5X(roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xf2HO\xef+q\xd3Q\xd1'), '\144' + chr(0b10011 + 0o122) + chr(0b1100011) + chr(0b1101111) + chr(0b1100000 + 0o4) + chr(3359 - 3258))(chr(0b1110101) + '\x74' + chr(0b1100110) + chr(0b101101) + '\x38'))) == nzTpIcepk0o8('\x30' + '\x6f' + '\x30', ord("\x08")) or ftfygxgFas5X(roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xe3\x1eM\xfb\x00G\xf3R\x929\xcf('), chr(100) + '\x65' + chr(0b1100011) + chr(0b1101111) + chr(0b1100100) + chr(0b1100101))(chr(0b100100 + 0o121) + '\164' + chr(941 - 839) + chr(1635 - 1590) + chr(0b111000)))) == nzTpIcepk0o8(chr(0b0 + 0o60) + chr(5225 - 5114) + '\x30', 8): raise WbNHlDKpyPtQ(roI3spqORKae(ES5oEprVxulp(b"\xd4EK\xac2w\xd8Z\xce*\xe8\x06\xac\x03*\t1\x8e3\xf9\xc3w\x00\xbd\x89\xe1\x83'\x93\xfc\xe1\xfd\x84s\x00\xc4\x96\xee%:\xae"), chr(100) + '\x65' + '\x63' + '\157' + chr(2385 - 2285) + chr(0b110001 + 0o64))(chr(0b11011 + 0o132) + '\164' + chr(0b1100110) + chr(0b101101) + chr(56))) return jLW6pRf2DSRk(ftfygxgFas5X(roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xf2HO\xef+q\xd3Q\xd1'), '\144' + chr(101) + chr(99) + chr(111) + chr(0b1001111 + 0o25) + chr(3605 - 3504))(chr(3759 - 3642) + chr(0b1100001 + 0o23) + chr(9670 - 9568) + chr(45) + '\x38')))) / jLW6pRf2DSRk(ftfygxgFas5X(roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xe3\x1eM\xfb\x00G\xf3R\x929\xcf('), '\144' + chr(0b110011 + 0o62) + '\143' + '\157' + chr(100) + chr(0b10011 + 0o122))(chr(0b1110101) + chr(0b1111 + 0o145) + chr(6246 - 6144) + chr(45) + '\070'))))
opencobra/memote
memote/support/basic.py
find_protein_complexes
def find_protein_complexes(model): """ Find reactions that are catalyzed by at least a heterodimer. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list Reactions whose gene-protein-reaction association contains at least one logical AND combining different gene products (heterodimer). """ complexes = [] for rxn in model.reactions: if not rxn.gene_reaction_rule: continue size = find_top_level_complex(rxn.gene_reaction_rule) if size >= 2: complexes.append(rxn) return complexes
python
def find_protein_complexes(model): """ Find reactions that are catalyzed by at least a heterodimer. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list Reactions whose gene-protein-reaction association contains at least one logical AND combining different gene products (heterodimer). """ complexes = [] for rxn in model.reactions: if not rxn.gene_reaction_rule: continue size = find_top_level_complex(rxn.gene_reaction_rule) if size >= 2: complexes.append(rxn) return complexes
[ "def", "find_protein_complexes", "(", "model", ")", ":", "complexes", "=", "[", "]", "for", "rxn", "in", "model", ".", "reactions", ":", "if", "not", "rxn", ".", "gene_reaction_rule", ":", "continue", "size", "=", "find_top_level_complex", "(", "rxn", ".", "gene_reaction_rule", ")", "if", "size", ">=", "2", ":", "complexes", ".", "append", "(", "rxn", ")", "return", "complexes" ]
Find reactions that are catalyzed by at least a heterodimer. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list Reactions whose gene-protein-reaction association contains at least one logical AND combining different gene products (heterodimer).
[ "Find", "reactions", "that", "are", "catalyzed", "by", "at", "least", "a", "heterodimer", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L195-L218
train
Returns a list of reactions that are catalyzed by at least one protein - reaction association.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b1010 + 0o46) + '\157' + '\x30', 0o10), nzTpIcepk0o8('\060' + '\157' + chr(783 - 734) + chr(767 - 716) + chr(0b1111 + 0o46), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(0b101110 + 0o4) + '\060' + '\061', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x33' + chr(2414 - 2364) + chr(53), 0b1000), nzTpIcepk0o8(chr(0b100100 + 0o14) + chr(0b111110 + 0o61) + chr(50) + chr(0b110110), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + '\x31' + chr(0b100101 + 0o16) + chr(1136 - 1088), 0b1000), nzTpIcepk0o8(chr(0b101110 + 0o2) + '\157' + chr(2387 - 2336) + chr(1432 - 1382) + chr(0b10011 + 0o36), ord("\x08")), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b11010 + 0o125) + chr(50) + '\x36' + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(50) + chr(0b110000) + chr(0b110111), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110010) + chr(2269 - 2218) + chr(48), 0b1000), nzTpIcepk0o8('\060' + chr(0b1100111 + 0o10) + chr(49) + '\x32' + '\061', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(425 - 375) + chr(0b110100) + '\061', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(0b110001) + '\x36' + chr(1843 - 1789), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b1100 + 0o47) + chr(0b100111 + 0o15), 0o10), nzTpIcepk0o8('\060' + chr(9587 - 9476) + chr(49) + '\x36' + chr(0b110001), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b1100 + 0o45) + chr(0b110001) + chr(791 - 739), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110010), 0b1000), nzTpIcepk0o8('\x30' + chr(3754 - 3643) + chr(2391 - 2342) + chr(706 - 651) + chr(2175 - 2127), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x32' + '\x32' + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1011010 + 0o25) + chr(49) + chr(0b110101) + '\x32', 0o10), nzTpIcepk0o8(chr(1536 - 1488) + chr(0b1010000 + 0o37) + chr(0b11100 + 0o27) + chr(0b110101) + chr(0b110110 + 0o1), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b101100 + 0o103) + chr(51) + chr(0b110001) + chr(2752 - 2698), 37083 - 37075), nzTpIcepk0o8(chr(2038 - 1990) + chr(2665 - 2554) + chr(0b110011) + '\x37' + '\063', 0b1000), nzTpIcepk0o8('\060' + chr(2994 - 2883) + chr(1150 - 1100) + chr(0b110110) + chr(0b110100 + 0o3), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(51) + chr(51) + '\067', 0b1000), nzTpIcepk0o8(chr(964 - 916) + chr(6057 - 5946) + chr(50) + chr(2688 - 2633) + chr(0b101111 + 0o1), 11459 - 11451), nzTpIcepk0o8(chr(0b10010 + 0o36) + '\x6f' + chr(0b110001) + chr(0b11 + 0o63) + '\x30', 11043 - 11035), nzTpIcepk0o8('\x30' + chr(111) + chr(0b11010 + 0o31) + chr(96 - 41) + chr(52), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(468 - 419) + chr(51) + '\062', 43884 - 43876), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(50) + chr(1873 - 1821) + '\065', 55000 - 54992), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b10101 + 0o34) + chr(0b110100) + '\x36', 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(0b11101 + 0o24) + '\x34' + chr(0b110010), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b11110 + 0o25) + chr(0b11010 + 0o35) + chr(0b110101), 0o10), nzTpIcepk0o8(chr(1418 - 1370) + chr(0b110110 + 0o71) + chr(1833 - 1781) + chr(205 - 157), 0o10), nzTpIcepk0o8(chr(339 - 291) + chr(0b1101111) + chr(2474 - 2424) + chr(0b110101) + chr(50), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(775 - 725) + '\x30' + chr(398 - 346), 27711 - 27703), nzTpIcepk0o8(chr(48) + '\x6f' + '\x37', 0b1000), nzTpIcepk0o8('\060' + chr(0b1010101 + 0o32) + chr(0b110001) + chr(720 - 671) + chr(0b101 + 0o55), 50852 - 50844), nzTpIcepk0o8('\x30' + '\x6f' + '\062' + chr(2157 - 2106), 58718 - 58710), nzTpIcepk0o8(chr(48) + chr(12282 - 12171) + chr(1922 - 1871) + chr(0b101101 + 0o6) + chr(0b110001 + 0o0), 9268 - 9260)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(53) + chr(0b10000 + 0o40), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'.'), chr(100) + '\x65' + '\143' + chr(0b1001110 + 0o41) + chr(0b1100100) + chr(0b1100101))('\165' + chr(0b1010111 + 0o35) + '\x66' + chr(0b11011 + 0o22) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def G1CAT4WpLG_r(KW0sEfjlgNpM): pVuUNS2vziT1 = [] for cXXyzqlAJbZW in roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'r8\xe0\xb6b1\xbe\xd8\xf4'), '\x64' + '\145' + chr(0b1100011) + chr(10099 - 9988) + chr(0b1001111 + 0o25) + '\x65')(chr(117) + '\164' + '\x66' + '\055' + chr(1219 - 1163))): if not roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'g8\xef\xb0I*\xb4\xd7\xe4\xec8\xce\x18C\x039n\x1d'), chr(0b1001001 + 0o33) + chr(101) + chr(99) + chr(0b10 + 0o155) + chr(0b1100100) + '\145')(chr(0b1110101) + chr(116) + chr(0b1101 + 0o131) + chr(0b1111 + 0o36) + chr(1025 - 969))): continue e1HrJaQHACnl = FoZRyF7XU_cN(cXXyzqlAJbZW.gene_reaction_rule) if e1HrJaQHACnl >= nzTpIcepk0o8(chr(0b11011 + 0o25) + '\x6f' + chr(0b110010), 8): roI3spqORKae(pVuUNS2vziT1, roI3spqORKae(ES5oEprVxulp(b'H\t\xd2\xe1n?\x96\xd9\xed\xf7\x04\x94'), chr(2714 - 2614) + chr(4857 - 4756) + chr(9296 - 9197) + chr(0b1101111) + chr(8397 - 8297) + chr(2074 - 1973))(chr(117) + chr(0b1110100) + '\x66' + chr(0b11001 + 0o24) + chr(392 - 336)))(cXXyzqlAJbZW) return pVuUNS2vziT1
opencobra/memote
memote/support/basic.py
is_constrained_reaction
def is_constrained_reaction(model, rxn): """Return whether a reaction has fixed constraints.""" lower_bound, upper_bound = helpers.find_bounds(model) if rxn.reversibility: return rxn.lower_bound > lower_bound or rxn.upper_bound < upper_bound else: return rxn.lower_bound > 0 or rxn.upper_bound < upper_bound
python
def is_constrained_reaction(model, rxn): """Return whether a reaction has fixed constraints.""" lower_bound, upper_bound = helpers.find_bounds(model) if rxn.reversibility: return rxn.lower_bound > lower_bound or rxn.upper_bound < upper_bound else: return rxn.lower_bound > 0 or rxn.upper_bound < upper_bound
[ "def", "is_constrained_reaction", "(", "model", ",", "rxn", ")", ":", "lower_bound", ",", "upper_bound", "=", "helpers", ".", "find_bounds", "(", "model", ")", "if", "rxn", ".", "reversibility", ":", "return", "rxn", ".", "lower_bound", ">", "lower_bound", "or", "rxn", ".", "upper_bound", "<", "upper_bound", "else", ":", "return", "rxn", ".", "lower_bound", ">", "0", "or", "rxn", ".", "upper_bound", "<", "upper_bound" ]
Return whether a reaction has fixed constraints.
[ "Return", "whether", "a", "reaction", "has", "fixed", "constraints", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L236-L242
train
Return whether a reaction has fixed constraints.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(0b110011 + 0o74) + '\065' + chr(0b110000), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110010) + '\060' + chr(0b100000 + 0o23), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1000111 + 0o50) + '\x33' + chr(0b110010) + chr(0b11001 + 0o30), 0b1000), nzTpIcepk0o8(chr(0b101100 + 0o4) + chr(0b1101111) + '\x35' + chr(48), 8), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(1178 - 1128) + chr(53) + chr(0b100110 + 0o12), 0o10), nzTpIcepk0o8(chr(1214 - 1166) + '\157' + '\063' + chr(0b110101), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b11000 + 0o127) + chr(0b100011 + 0o23) + chr(2006 - 1956), 16849 - 16841), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110100) + chr(0b100 + 0o55), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(50) + '\065' + chr(0b100011 + 0o22), 0b1000), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(1783 - 1672) + chr(0b101101 + 0o4) + chr(0b0 + 0o66) + chr(2167 - 2117), 0b1000), nzTpIcepk0o8('\060' + '\157' + '\063' + '\065' + chr(0b110010), 36181 - 36173), nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(2883 - 2772) + chr(0b110010) + chr(857 - 805) + chr(0b1010 + 0o47), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(7893 - 7782) + '\x34' + chr(1347 - 1296), 0b1000), nzTpIcepk0o8('\x30' + chr(12114 - 12003) + chr(75 - 21) + '\x35', 28643 - 28635), nzTpIcepk0o8(chr(0b11001 + 0o27) + chr(0b1101111) + chr(0b110010) + '\x36' + chr(0b110011), 15961 - 15953), nzTpIcepk0o8(chr(0b101000 + 0o10) + chr(0b1101111) + chr(0b110011) + chr(0b101 + 0o56) + chr(50), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x31' + '\x35' + chr(2321 - 2269), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110011) + chr(463 - 411) + chr(1225 - 1170), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(54) + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + '\061' + chr(0b110001) + chr(52), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110101) + '\066', 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b1001 + 0o50) + chr(819 - 767), ord("\x08")), nzTpIcepk0o8(chr(723 - 675) + chr(0b11101 + 0o122) + chr(0b110001) + chr(0b1 + 0o66) + chr(51), 29086 - 29078), nzTpIcepk0o8(chr(0b110000) + '\157' + '\063' + '\x34' + '\060', 0o10), nzTpIcepk0o8(chr(48) + chr(11938 - 11827) + '\063' + chr(51) + chr(0b10 + 0o61), 0o10), nzTpIcepk0o8('\x30' + chr(0b1001 + 0o146) + '\063' + chr(51) + chr(52), 39520 - 39512), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\063' + chr(0b110110) + chr(0b101100 + 0o5), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\062' + chr(0b101011 + 0o6) + chr(0b101100 + 0o11), 54737 - 54729), nzTpIcepk0o8(chr(0b110000) + '\157' + '\067' + chr(0b10110 + 0o40), 23467 - 23459), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b10111 + 0o31), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110011) + '\x32' + chr(49), 8), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110110) + '\063', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b101101 + 0o102) + chr(0b110010) + '\063' + chr(0b101100 + 0o5), 17017 - 17009), nzTpIcepk0o8('\x30' + '\157' + chr(50) + chr(53) + '\067', 0o10), nzTpIcepk0o8('\060' + '\157' + chr(0b110011) + chr(0b101 + 0o60) + '\066', 0b1000), nzTpIcepk0o8('\x30' + chr(111) + '\x31' + chr(2391 - 2342) + chr(0b100101 + 0o22), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\063' + '\x33' + chr(48), 0o10), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(0b101010 + 0o105) + chr(157 - 107) + '\x30' + '\x37', 1754 - 1746), nzTpIcepk0o8(chr(48) + chr(10850 - 10739) + chr(749 - 700) + chr(0b110110) + chr(2076 - 2023), 29040 - 29032), nzTpIcepk0o8(chr(1536 - 1488) + chr(7156 - 7045) + chr(725 - 674) + chr(0b101 + 0o57) + chr(0b110010), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110101) + chr(0b11100 + 0o24), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x06'), chr(100) + '\x65' + '\x63' + chr(111) + chr(0b101100 + 0o70) + chr(101))(chr(240 - 123) + chr(11963 - 11847) + '\x66' + chr(743 - 698) + chr(0b100 + 0o64)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def wqYEhVObTaXD(KW0sEfjlgNpM, cXXyzqlAJbZW): (oZmGA2tDSegk, IJAWNEqnuoWd) = ofBs4ZktVP6z.find_bounds(KW0sEfjlgNpM) if roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'Z\xe6\xa7M\xdan[C\xc4\x1e\x83\xd5Z'), chr(0b110001 + 0o63) + chr(0b100110 + 0o77) + '\x63' + '\x6f' + chr(100) + '\x65')('\x75' + chr(9496 - 9380) + chr(7411 - 7309) + chr(0b1011 + 0o42) + chr(287 - 231))): return roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'G\xd9\xbco\xe9/Fe\xfe\x17\x8d\xca'), '\x64' + '\x65' + '\143' + chr(0b1010100 + 0o33) + '\144' + chr(0b1100101))(chr(0b1110101) + chr(116) + '\146' + chr(0b10001 + 0o34) + chr(56))) > oZmGA2tDSegk or roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'a\xc9\x90\x7f\xe6XCO\xd8\x1d\xbd\xc5'), chr(0b1100100) + '\145' + chr(7177 - 7078) + chr(0b1101111) + chr(100) + '\x65')('\165' + chr(0b1101011 + 0o11) + chr(0b1100 + 0o132) + chr(0b101101) + chr(0b111000))) < IJAWNEqnuoWd else: return roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'G\xd9\xbco\xe9/Fe\xfe\x17\x8d\xca'), chr(0b100100 + 0o100) + '\x65' + chr(987 - 888) + chr(10267 - 10156) + chr(0b1100100) + chr(0b110110 + 0o57))(chr(2608 - 2491) + chr(0b1110100) + chr(0b11001 + 0o115) + '\055' + '\070')) > nzTpIcepk0o8(chr(48) + chr(111) + '\x30', 8) or roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'a\xc9\x90\x7f\xe6XCO\xd8\x1d\xbd\xc5'), chr(0b111111 + 0o45) + '\x65' + chr(1031 - 932) + '\157' + chr(0b1001100 + 0o30) + chr(0b1000101 + 0o40))(chr(0b1001100 + 0o51) + chr(8271 - 8155) + '\146' + chr(0b101101) + chr(953 - 897))) < IJAWNEqnuoWd
opencobra/memote
memote/support/basic.py
find_oxygen_reactions
def find_oxygen_reactions(model): """Return list of oxygen-producing/-consuming reactions.""" o2_in_model = helpers.find_met_in_model(model, "MNXM4") return set([rxn for met in model.metabolites for rxn in met.reactions if met.formula == "O2" or met in o2_in_model])
python
def find_oxygen_reactions(model): """Return list of oxygen-producing/-consuming reactions.""" o2_in_model = helpers.find_met_in_model(model, "MNXM4") return set([rxn for met in model.metabolites for rxn in met.reactions if met.formula == "O2" or met in o2_in_model])
[ "def", "find_oxygen_reactions", "(", "model", ")", ":", "o2_in_model", "=", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM4\"", ")", "return", "set", "(", "[", "rxn", "for", "met", "in", "model", ".", "metabolites", "for", "rxn", "in", "met", ".", "reactions", "if", "met", ".", "formula", "==", "\"O2\"", "or", "met", "in", "o2_in_model", "]", ")" ]
Return list of oxygen-producing/-consuming reactions.
[ "Return", "list", "of", "oxygen", "-", "producing", "/", "-", "consuming", "reactions", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L245-L250
train
Return list of oxygen - produces and - consuming reactions.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110001) + chr(2164 - 2112) + '\065', 4939 - 4931), nzTpIcepk0o8(chr(1647 - 1599) + chr(0b1011111 + 0o20) + chr(1823 - 1772) + chr(404 - 349) + chr(0b110011), 0o10), nzTpIcepk0o8(chr(975 - 927) + chr(0b101011 + 0o104) + chr(1698 - 1647) + chr(111 - 58) + chr(2078 - 2027), 0o10), nzTpIcepk0o8(chr(0b111 + 0o51) + chr(3506 - 3395) + '\062' + '\x32' + chr(1757 - 1707), 0b1000), nzTpIcepk0o8(chr(0b11110 + 0o22) + chr(2207 - 2096) + chr(0b110001) + chr(52) + chr(52), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b111000 + 0o67) + chr(220 - 169) + '\x32' + chr(2522 - 2469), 64943 - 64935), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110011) + chr(1838 - 1788) + '\x35', 8), nzTpIcepk0o8('\060' + chr(0b110 + 0o151) + chr(0b110010) + chr(0b110011) + chr(0b1110 + 0o44), 33582 - 33574), nzTpIcepk0o8('\060' + '\157' + '\061' + chr(0b11100 + 0o31) + '\x33', 0o10), nzTpIcepk0o8(chr(949 - 901) + chr(9368 - 9257) + chr(0b11001 + 0o36) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(111) + chr(2198 - 2147) + '\067' + chr(0b110001), 53235 - 53227), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(530 - 481) + chr(54) + chr(736 - 682), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\061' + '\x35', 21974 - 21966), nzTpIcepk0o8(chr(48) + chr(0b1001000 + 0o47) + '\x32' + chr(0b110011) + chr(0b101110 + 0o4), 8), nzTpIcepk0o8(chr(0b110000) + chr(9869 - 9758) + chr(50) + '\067' + chr(419 - 365), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(49) + '\x35' + chr(0b111 + 0o51), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + '\063' + chr(53) + '\x30', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(49) + chr(471 - 422) + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(905 - 857) + '\x6f' + chr(1045 - 990), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110001) + '\x37' + '\066', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b100110 + 0o14) + '\062' + chr(50), 8), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(111) + chr(0b110010) + '\063' + '\x36', 9416 - 9408), nzTpIcepk0o8('\060' + chr(0b1000101 + 0o52) + chr(0b110101) + chr(0b110010), 0b1000), nzTpIcepk0o8(chr(0b11111 + 0o21) + chr(0b1011000 + 0o27) + '\063' + '\062' + chr(721 - 666), 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110010) + '\x34' + '\x31', ord("\x08")), nzTpIcepk0o8(chr(1054 - 1006) + '\157' + chr(0b110101) + chr(52), ord("\x08")), nzTpIcepk0o8('\x30' + chr(8523 - 8412) + chr(609 - 558) + '\x30' + chr(866 - 817), ord("\x08")), nzTpIcepk0o8(chr(0b100111 + 0o11) + chr(111) + '\x33' + chr(0b10000 + 0o46), 17778 - 17770), nzTpIcepk0o8(chr(0b100100 + 0o14) + '\x6f' + chr(0b10101 + 0o35) + chr(52) + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110001) + chr(0b11001 + 0o27) + chr(49), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\065' + '\064', 8), nzTpIcepk0o8('\x30' + chr(0b1001 + 0o146) + '\062' + '\062', 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b100011 + 0o16) + chr(0b110100) + chr(48), ord("\x08")), nzTpIcepk0o8(chr(0b10101 + 0o33) + '\x6f' + chr(0b10 + 0o60) + chr(52) + '\x30', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + '\x31' + chr(0b110001) + chr(50), 0o10), nzTpIcepk0o8('\060' + '\157' + chr(0b101100 + 0o11) + chr(2116 - 2067), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(49) + chr(53) + chr(0b100110 + 0o15), 8), nzTpIcepk0o8(chr(48) + '\157' + chr(2490 - 2440) + '\x37' + chr(49), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(50) + chr(1159 - 1111) + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(2123 - 2072) + chr(0b10 + 0o65) + '\067', 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(549 - 501) + '\x6f' + '\065' + '\x30', 42688 - 42680)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'K'), '\144' + '\145' + chr(0b1100011) + chr(111) + chr(0b1000110 + 0o36) + chr(0b10100 + 0o121))('\165' + chr(116) + chr(0b1000 + 0o136) + chr(45) + chr(1588 - 1532)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def xcXWIAvmxBlG(KW0sEfjlgNpM): VytOEWgyGWaC = ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'(\xb5\xb3\xdfP'), '\x64' + '\145' + chr(1669 - 1570) + chr(0b1101111) + '\x64' + chr(0b1100101))(chr(0b1110101) + '\x74' + chr(9973 - 9871) + '\x2d' + chr(1502 - 1446))) return Bvi71nNyvlqO([cXXyzqlAJbZW for dYApxmRvGyhb in roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x08\x9e\x9f\xf3\x06\xba\xb9\xf3\x1fZ\x8a'), chr(0b1100100) + chr(0b1100101) + '\143' + '\x6f' + '\144' + chr(101))('\165' + chr(0b1011010 + 0o32) + chr(102) + '\055' + chr(56))) for cXXyzqlAJbZW in roI3spqORKae(dYApxmRvGyhb, roI3spqORKae(ES5oEprVxulp(b'\x17\x9e\x8a\xf1\x10\xbc\xba\xf4\x18'), '\144' + chr(9555 - 9454) + chr(0b1100011) + chr(0b1011100 + 0o23) + chr(0b1011011 + 0o11) + chr(0b1010110 + 0o17))('\x75' + chr(116) + chr(0b1001011 + 0o33) + chr(0b101 + 0o50) + chr(2779 - 2723))) if roI3spqORKae(dYApxmRvGyhb, roI3spqORKae(ES5oEprVxulp(b'\x03\x94\x99\xff\x11\xb9\xb4'), chr(100) + chr(0b1100101) + '\x63' + chr(0b101111 + 0o100) + '\144' + chr(0b1100101))('\x75' + chr(116) + '\x66' + '\x2d' + chr(0b1010 + 0o56))) == roI3spqORKae(ES5oEprVxulp(b'*\xc9'), '\x64' + chr(0b1100101) + '\x63' + chr(0b1101111) + '\x64' + chr(101))('\165' + chr(0b1110100) + chr(0b1100110) + chr(0b101101) + '\x38') or dYApxmRvGyhb in VytOEWgyGWaC])
opencobra/memote
memote/support/basic.py
find_unique_metabolites
def find_unique_metabolites(model): """Return set of metabolite IDs without duplicates from compartments.""" unique = set() for met in model.metabolites: is_missing = True for comp in model.compartments: if met.id.endswith("_{}".format(comp)): unique.add(met.id[:-(len(comp) + 1)]) is_missing = False break if is_missing: unique.add(met.id) return unique
python
def find_unique_metabolites(model): """Return set of metabolite IDs without duplicates from compartments.""" unique = set() for met in model.metabolites: is_missing = True for comp in model.compartments: if met.id.endswith("_{}".format(comp)): unique.add(met.id[:-(len(comp) + 1)]) is_missing = False break if is_missing: unique.add(met.id) return unique
[ "def", "find_unique_metabolites", "(", "model", ")", ":", "unique", "=", "set", "(", ")", "for", "met", "in", "model", ".", "metabolites", ":", "is_missing", "=", "True", "for", "comp", "in", "model", ".", "compartments", ":", "if", "met", ".", "id", ".", "endswith", "(", "\"_{}\"", ".", "format", "(", "comp", ")", ")", ":", "unique", ".", "add", "(", "met", ".", "id", "[", ":", "-", "(", "len", "(", "comp", ")", "+", "1", ")", "]", ")", "is_missing", "=", "False", "break", "if", "is_missing", ":", "unique", ".", "add", "(", "met", ".", "id", ")", "return", "unique" ]
Return set of metabolite IDs without duplicates from compartments.
[ "Return", "set", "of", "metabolite", "IDs", "without", "duplicates", "from", "compartments", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L253-L265
train
Return set of metabolite IDs without duplicates from compartments.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(111) + chr(51) + '\x35' + chr(2457 - 2402), 10721 - 10713), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x31' + chr(2709 - 2654) + '\061', 14004 - 13996), nzTpIcepk0o8(chr(48) + chr(111) + '\062' + chr(0b1010 + 0o51) + '\x37', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1100001 + 0o16) + '\x31' + '\060' + chr(0b100000 + 0o26), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(0b1110 + 0o46) + chr(0b110000 + 0o5), 0o10), nzTpIcepk0o8('\060' + chr(9884 - 9773) + chr(1298 - 1243) + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(734 - 684) + '\062' + chr(2064 - 2016), ord("\x08")), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(111) + chr(0b110110) + chr(1330 - 1282), 0o10), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(0b1101111) + chr(1750 - 1699) + '\067' + chr(1953 - 1904), 7291 - 7283), nzTpIcepk0o8('\x30' + chr(632 - 521) + chr(0b10 + 0o57) + '\061' + chr(0b110 + 0o56), ord("\x08")), nzTpIcepk0o8(chr(819 - 771) + '\157' + chr(49) + '\062', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110001) + '\x34' + chr(0b110010), ord("\x08")), nzTpIcepk0o8('\x30' + chr(4272 - 4161) + '\x33' + '\x37' + '\064', 3589 - 3581), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(111) + '\065' + chr(0b10000 + 0o41), 0b1000), nzTpIcepk0o8(chr(1157 - 1109) + chr(111) + chr(0b10000 + 0o41) + chr(0b110011 + 0o4) + chr(2383 - 2334), 8), nzTpIcepk0o8('\x30' + chr(136 - 25) + chr(520 - 471) + chr(525 - 474) + '\x34', 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + '\062' + '\x33' + chr(50), 0b1000), nzTpIcepk0o8('\x30' + chr(8964 - 8853) + chr(1974 - 1925) + '\x36' + chr(1546 - 1497), ord("\x08")), nzTpIcepk0o8(chr(0b11101 + 0o23) + '\x6f' + chr(51) + chr(1541 - 1486) + chr(48), ord("\x08")), nzTpIcepk0o8(chr(70 - 22) + chr(3144 - 3033) + chr(0b100100 + 0o17) + chr(0b100 + 0o56) + chr(49), 14916 - 14908), nzTpIcepk0o8(chr(0b11010 + 0o26) + chr(0b1111 + 0o140) + '\061' + '\061' + '\x31', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(1105 - 1053) + chr(0b11011 + 0o34), 0o10), nzTpIcepk0o8('\060' + chr(0b101000 + 0o107) + '\062' + '\x33' + chr(0b110000), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b1100 + 0o52) + chr(877 - 825), 0o10), nzTpIcepk0o8('\060' + chr(12062 - 11951) + '\065' + '\066', 43008 - 43000), nzTpIcepk0o8(chr(1280 - 1232) + chr(111) + chr(49) + chr(53) + chr(52), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\062' + chr(528 - 479) + '\064', 0b1000), nzTpIcepk0o8(chr(2221 - 2173) + '\x6f' + chr(0b110001) + chr(54) + '\x36', 0o10), nzTpIcepk0o8(chr(830 - 782) + chr(10043 - 9932) + '\063' + '\060' + '\x37', 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b110110) + chr(0b110100), 8), nzTpIcepk0o8(chr(643 - 595) + '\157' + '\063' + chr(0b110011), 36337 - 36329), nzTpIcepk0o8('\060' + '\x6f' + '\x32' + chr(53) + chr(0b1111 + 0o41), 0o10), nzTpIcepk0o8('\x30' + '\157' + '\x32' + chr(1852 - 1797), 0b1000), nzTpIcepk0o8(chr(0b11100 + 0o24) + chr(111) + chr(2333 - 2282) + chr(664 - 610) + chr(0b110001), 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\067' + '\x34', ord("\x08")), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(111) + '\062' + chr(0b11100 + 0o24) + chr(2492 - 2437), ord("\x08")), nzTpIcepk0o8(chr(0b101 + 0o53) + '\x6f' + '\062', 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b101100 + 0o7) + chr(54), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\062' + chr(0b11000 + 0o32) + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(0b11101 + 0o23) + chr(111) + chr(53) + chr(0b110111), 9292 - 9284)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + '\x6f' + '\065' + chr(0b110000), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xc1'), chr(0b1100100) + '\x65' + chr(99) + '\x6f' + chr(100) + chr(0b10110 + 0o117))('\x75' + '\164' + chr(102) + chr(1348 - 1303) + chr(1107 - 1051)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def YXGWOqcoY0Ce(KW0sEfjlgNpM): G3de2eWQaS0D = Bvi71nNyvlqO() for dYApxmRvGyhb in roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b"\x82\x1c\xeb'GQ\xfcY\x8d)y"), '\x64' + '\x65' + '\143' + chr(0b110 + 0o151) + chr(100) + '\x65')(chr(7578 - 7461) + '\164' + chr(10305 - 10203) + chr(0b101101) + chr(2562 - 2506))): zYFtC4_vxWk9 = nzTpIcepk0o8('\060' + '\x6f' + chr(49), ord("\x08")) for B881keGOXOsp in roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x8c\x16\xf26DL\xe4]\x9c"~\x11'), '\144' + chr(1928 - 1827) + chr(0b1100011) + chr(111) + chr(577 - 477) + chr(0b1100101))(chr(10284 - 10167) + '\164' + '\x66' + '\x2d' + '\x38')): if roI3spqORKae(dYApxmRvGyhb.id, roI3spqORKae(ES5oEprVxulp(b'\xa6@\xf9\rl}\xd1|\x989@\x10'), chr(3243 - 3143) + chr(0b1010011 + 0o22) + '\x63' + chr(0b1101111) + '\144' + chr(0b1100001 + 0o4))(chr(0b1110101) + '\x74' + chr(0b1 + 0o145) + chr(0b101101) + chr(1132 - 1076)))(roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'\xb0\x02\xe2'), chr(0b1100100) + chr(0b101101 + 0o70) + chr(0b1011110 + 0o5) + chr(0b1101111) + '\x64' + chr(101))('\165' + chr(0b1110100) + chr(0b1100110) + chr(738 - 693) + '\070'), roI3spqORKae(ES5oEprVxulp(b'\x9eJ\xac\rb\r\xf6_\xa8\x13I('), chr(0b1 + 0o143) + '\x65' + '\143' + chr(0b1101111) + chr(100) + chr(0b1011001 + 0o14))(chr(4342 - 4225) + '\x74' + chr(353 - 251) + chr(0b101101 + 0o0) + chr(0b10110 + 0o42)))(B881keGOXOsp)): roI3spqORKae(G3de2eWQaS0D, roI3spqORKae(ES5oEprVxulp(b'\x9aJ\xce"LM\xd9A\xbd*I\x06'), chr(0b1100100) + '\145' + '\143' + '\157' + chr(100) + chr(101))(chr(0b1110101) + chr(116) + chr(6381 - 6279) + chr(0b101101) + chr(56)))(roI3spqORKae(dYApxmRvGyhb, roI3spqORKae(ES5oEprVxulp(b'\x82\x18\xd3(iY\xa8\x7f\xcc6Z6'), '\144' + chr(101) + '\143' + '\x6f' + '\x64' + chr(0b1100101))(chr(1056 - 939) + chr(116) + '\x66' + chr(831 - 786) + chr(0b1011 + 0o55)))[:-(ftfygxgFas5X(B881keGOXOsp) + nzTpIcepk0o8(chr(0b100110 + 0o12) + chr(5761 - 5650) + chr(0b100 + 0o55), 8))]) zYFtC4_vxWk9 = nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(0b1101111) + chr(0b101 + 0o53), ord("\x08")) break if zYFtC4_vxWk9: roI3spqORKae(G3de2eWQaS0D, roI3spqORKae(ES5oEprVxulp(b'\x9aJ\xce"LM\xd9A\xbd*I\x06'), chr(100) + chr(0b1010111 + 0o16) + '\x63' + chr(0b1101111) + '\x64' + chr(4454 - 4353))('\165' + chr(0b1110100) + chr(102) + '\x2d' + chr(0b100001 + 0o27)))(roI3spqORKae(dYApxmRvGyhb, roI3spqORKae(ES5oEprVxulp(b'\x82\x18\xd3(iY\xa8\x7f\xcc6Z6'), chr(0b1 + 0o143) + chr(342 - 241) + '\143' + chr(0b1101111) + '\x64' + '\x65')(chr(0b1110101) + chr(0b1000000 + 0o64) + '\x66' + chr(0b101101) + chr(0b111000)))) return G3de2eWQaS0D
opencobra/memote
memote/support/basic.py
find_duplicate_metabolites_in_compartments
def find_duplicate_metabolites_in_compartments(model): """ Return list of metabolites with duplicates in the same compartment. This function identifies duplicate metabolites in each compartment by determining if any two metabolites have identical InChI-key annotations. For instance, this function would find compounds with IDs ATP1 and ATP2 in the cytosolic compartment, with both having the same InChI annotations. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list A list of tuples of duplicate metabolites. """ unique_identifiers = ["inchikey", "inchi"] duplicates = [] for met_1, met_2 in combinations(model.metabolites, 2): if met_1.compartment == met_2.compartment: for key in unique_identifiers: if key in met_1.annotation and key in met_2.annotation: if met_1.annotation[key] == met_2.annotation[key]: duplicates.append((met_1.id, met_2.id)) break return duplicates
python
def find_duplicate_metabolites_in_compartments(model): """ Return list of metabolites with duplicates in the same compartment. This function identifies duplicate metabolites in each compartment by determining if any two metabolites have identical InChI-key annotations. For instance, this function would find compounds with IDs ATP1 and ATP2 in the cytosolic compartment, with both having the same InChI annotations. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list A list of tuples of duplicate metabolites. """ unique_identifiers = ["inchikey", "inchi"] duplicates = [] for met_1, met_2 in combinations(model.metabolites, 2): if met_1.compartment == met_2.compartment: for key in unique_identifiers: if key in met_1.annotation and key in met_2.annotation: if met_1.annotation[key] == met_2.annotation[key]: duplicates.append((met_1.id, met_2.id)) break return duplicates
[ "def", "find_duplicate_metabolites_in_compartments", "(", "model", ")", ":", "unique_identifiers", "=", "[", "\"inchikey\"", ",", "\"inchi\"", "]", "duplicates", "=", "[", "]", "for", "met_1", ",", "met_2", "in", "combinations", "(", "model", ".", "metabolites", ",", "2", ")", ":", "if", "met_1", ".", "compartment", "==", "met_2", ".", "compartment", ":", "for", "key", "in", "unique_identifiers", ":", "if", "key", "in", "met_1", ".", "annotation", "and", "key", "in", "met_2", ".", "annotation", ":", "if", "met_1", ".", "annotation", "[", "key", "]", "==", "met_2", ".", "annotation", "[", "key", "]", ":", "duplicates", ".", "append", "(", "(", "met_1", ".", "id", ",", "met_2", ".", "id", ")", ")", "break", "return", "duplicates" ]
Return list of metabolites with duplicates in the same compartment. This function identifies duplicate metabolites in each compartment by determining if any two metabolites have identical InChI-key annotations. For instance, this function would find compounds with IDs ATP1 and ATP2 in the cytosolic compartment, with both having the same InChI annotations. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list A list of tuples of duplicate metabolites.
[ "Return", "list", "of", "metabolites", "with", "duplicates", "in", "the", "same", "compartment", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L269-L298
train
This function finds duplicate metabolites in each compartment.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(1693 - 1645) + chr(0b1101111) + chr(0b110010) + '\x34' + chr(0b110010 + 0o1), 53639 - 53631), nzTpIcepk0o8('\x30' + '\157' + '\061' + chr(49) + chr(0b110011), 60841 - 60833), nzTpIcepk0o8('\060' + chr(8728 - 8617) + '\x31' + chr(0b110001) + '\x34', 23573 - 23565), nzTpIcepk0o8(chr(0b101011 + 0o5) + chr(8512 - 8401) + chr(0b110011) + chr(54) + '\060', 0o10), nzTpIcepk0o8(chr(48) + chr(2994 - 2883) + chr(923 - 872) + chr(0b101010 + 0o12) + '\x36', 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\x35' + '\x31', 30745 - 30737), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b10001 + 0o42) + chr(0b10111 + 0o31), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110111) + '\x36', ord("\x08")), nzTpIcepk0o8('\x30' + chr(8646 - 8535) + chr(1837 - 1786) + '\067' + chr(51), 64998 - 64990), nzTpIcepk0o8('\060' + chr(0b1000101 + 0o52) + chr(402 - 352) + chr(1804 - 1756) + chr(53), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b111111 + 0o60) + chr(0b110001) + chr(752 - 697) + chr(0b11011 + 0o26), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + '\x34' + chr(0b1111 + 0o47), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + '\063' + '\061' + chr(412 - 362), 37586 - 37578), nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(111) + '\x37' + '\061', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b101001 + 0o106) + chr(0b110011) + chr(1194 - 1139) + chr(0b110000), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1011011 + 0o24) + '\x31' + chr(0b11010 + 0o34) + chr(0b110101), 0b1000), nzTpIcepk0o8('\x30' + chr(3048 - 2937) + chr(1045 - 991) + chr(0b100000 + 0o21), ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\067' + '\x31', 8), nzTpIcepk0o8(chr(1848 - 1800) + chr(0b1111 + 0o140) + '\x32' + chr(0b110001) + chr(49), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x37', 0b1000), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(4355 - 4244) + chr(1819 - 1768) + chr(0b110011) + '\061', 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(485 - 434) + chr(500 - 450) + '\061', 3070 - 3062), nzTpIcepk0o8(chr(0b101100 + 0o4) + chr(111) + chr(1120 - 1069) + chr(374 - 325) + chr(1354 - 1302), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(50) + chr(991 - 937), 0o10), nzTpIcepk0o8(chr(1790 - 1742) + chr(0b1101111) + chr(0b101 + 0o55) + '\064' + '\065', 32705 - 32697), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110001) + chr(51) + chr(0b101 + 0o56), 49931 - 49923), nzTpIcepk0o8(chr(48) + chr(9889 - 9778) + chr(0b110100) + chr(1452 - 1402), ord("\x08")), nzTpIcepk0o8(chr(0b101110 + 0o2) + chr(0b111010 + 0o65) + chr(0b11110 + 0o23) + '\065' + chr(0b110111), 35411 - 35403), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x31' + '\x33' + '\x36', 13893 - 13885), nzTpIcepk0o8(chr(0b1111 + 0o41) + '\157' + chr(0b110000), 26201 - 26193), nzTpIcepk0o8(chr(0b110000) + chr(0b10100 + 0o133) + '\x32' + chr(0b10100 + 0o42) + chr(55), 5930 - 5922), nzTpIcepk0o8(chr(0b10011 + 0o35) + '\157' + '\x31' + '\x36' + '\x30', 24169 - 24161), nzTpIcepk0o8(chr(48) + chr(2695 - 2584) + '\061' + chr(0b110010) + '\x34', 29205 - 29197), nzTpIcepk0o8(chr(0b10011 + 0o35) + '\x6f' + '\062' + chr(0b110100) + chr(0b110001), 15490 - 15482), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(360 - 309) + chr(445 - 392) + chr(2140 - 2088), 0b1000), nzTpIcepk0o8(chr(0b100010 + 0o16) + '\157' + '\x32' + chr(0b110010) + '\x30', 0o10), nzTpIcepk0o8('\x30' + chr(0b10010 + 0o135) + chr(0b1101 + 0o46) + chr(455 - 402) + chr(617 - 569), 47282 - 47274), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b10010 + 0o37) + '\x32' + chr(51), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + '\x34' + chr(49), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(49) + chr(2588 - 2534) + chr(0b10100 + 0o35), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b101000 + 0o10) + '\x6f' + chr(0b110101) + chr(0b110000), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x8d'), chr(0b1100100) + '\x65' + '\x63' + chr(0b1101111) + '\x64' + chr(0b11000 + 0o115))('\165' + chr(6021 - 5905) + '\146' + chr(1830 - 1785) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def IptrfM1ZyICm(KW0sEfjlgNpM): losiH5HHPoxj = [roI3spqORKae(ES5oEprVxulp(b'\xca%/\x98\x8fB}G'), '\144' + chr(101) + chr(2192 - 2093) + chr(10346 - 10235) + chr(100) + chr(0b1001 + 0o134))('\x75' + '\164' + chr(8605 - 8503) + chr(0b10101 + 0o30) + '\x38'), roI3spqORKae(ES5oEprVxulp(b'\xca%/\x98\x8f'), chr(100) + '\x65' + '\143' + '\x6f' + chr(100) + chr(1332 - 1231))(chr(117) + '\x74' + chr(9562 - 9460) + '\x2d' + chr(0b111000))] I9sz1GWxe0jB = [] for (TrlK6CLmTp6j, iKi35A8ZR1fL) in u9j1YIgP0mZI(roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xce.8\x91\x84FtW\x8f\xe0\n'), chr(100) + chr(0b1100101) + chr(0b1100011) + chr(0b1101111) + '\144' + chr(0b111001 + 0o54))('\x75' + chr(0b1000111 + 0o55) + '\146' + chr(0b10 + 0o53) + chr(0b111000))), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(0b111000 + 0o67) + chr(138 - 88), 17647 - 17639)): if roI3spqORKae(TrlK6CLmTp6j, roI3spqORKae(ES5oEprVxulp(b'\xf4\x1d{\x85\x82Yhk\x8d\xb5\x0fk'), chr(4896 - 4796) + chr(0b10111 + 0o116) + chr(324 - 225) + chr(111) + chr(8223 - 8123) + '\x65')(chr(1674 - 1557) + '\x74' + chr(102) + '\055' + chr(926 - 870))) == roI3spqORKae(iKi35A8ZR1fL, roI3spqORKae(ES5oEprVxulp(b'\xf4\x1d{\x85\x82Yhk\x8d\xb5\x0fk'), '\144' + chr(0b1100101) + '\143' + '\x6f' + chr(100) + chr(0b1100101))(chr(0b1001111 + 0o46) + '\x74' + chr(4229 - 4127) + chr(45) + chr(1285 - 1229))): for QYodcsDtoGq7 in losiH5HHPoxj: if QYodcsDtoGq7 in roI3spqORKae(TrlK6CLmTp6j, roI3spqORKae(ES5oEprVxulp(b'\xc2%"\x9f\x92HlW\x94\xeb'), '\x64' + chr(101) + chr(0b1100011) + chr(0b1000111 + 0o50) + chr(0b1100100) + chr(0b1100101))(chr(5303 - 5186) + '\x74' + chr(0b1100110) + chr(0b101101) + chr(1245 - 1189))) and QYodcsDtoGq7 in roI3spqORKae(iKi35A8ZR1fL, roI3spqORKae(ES5oEprVxulp(b'\xc2%"\x9f\x92HlW\x94\xeb'), chr(0b10100 + 0o120) + chr(0b1100101) + chr(7220 - 7121) + chr(0b1100100 + 0o13) + chr(100) + chr(0b11 + 0o142))('\165' + '\x74' + '\x66' + '\x2d' + chr(2215 - 2159))): if roI3spqORKae(TrlK6CLmTp6j, roI3spqORKae(ES5oEprVxulp(b'\xc2%"\x9f\x92HlW\x94\xeb'), '\144' + '\145' + chr(99) + chr(0b1000100 + 0o53) + chr(100) + chr(0b111001 + 0o54))(chr(0b11101 + 0o130) + chr(5340 - 5224) + '\146' + chr(0b101001 + 0o4) + chr(0b111000)))[QYodcsDtoGq7] == roI3spqORKae(iKi35A8ZR1fL, roI3spqORKae(ES5oEprVxulp(b'\xc2%"\x9f\x92HlW\x94\xeb'), '\144' + chr(101) + chr(2932 - 2833) + chr(111) + chr(0b1100100) + chr(0b1011010 + 0o13))(chr(3269 - 3152) + chr(0b110100 + 0o100) + chr(0b1100110) + '\x2d' + chr(0b111000)))[QYodcsDtoGq7]: roI3spqORKae(I9sz1GWxe0jB, roI3spqORKae(ES5oEprVxulp(b'\xeb\x1f\x1f\xc4\x9eN_Q\x91\xea,\x13'), chr(4830 - 4730) + '\145' + chr(99) + chr(111) + chr(1300 - 1200) + chr(7226 - 7125))('\165' + chr(116) + '\146' + '\055' + '\x38'))((roI3spqORKae(TrlK6CLmTp6j, roI3spqORKae(ES5oEprVxulp(b'\xce*\x00\x9e\xaaN q\xce\xff)r'), chr(3036 - 2936) + chr(8999 - 8898) + '\x63' + chr(0b1101111) + '\144' + chr(0b1001 + 0o134))('\165' + '\x74' + chr(102) + chr(0b101101) + chr(0b111000))), roI3spqORKae(iKi35A8ZR1fL, roI3spqORKae(ES5oEprVxulp(b'\xce*\x00\x9e\xaaN q\xce\xff)r'), '\144' + '\x65' + chr(5220 - 5121) + chr(0b1101111) + chr(0b111010 + 0o52) + chr(0b1100101))(chr(0b1110101) + chr(116) + chr(102) + chr(45) + '\x38')))) break return I9sz1GWxe0jB
opencobra/memote
memote/support/basic.py
find_reactions_with_partially_identical_annotations
def find_reactions_with_partially_identical_annotations(model): """ Return duplicate reactions based on identical annotation. Identify duplicate reactions globally by checking if any two metabolic reactions have the same entries in their annotation attributes. This can be useful to identify one 'type' of reactions that occurs in several compartments, to curate merged models or to clean-up bulk model modifications. The heuristic looks at annotations with the keys "metanetx.reaction", "kegg.reaction", "brenda", "rhea", "biocyc", "bigg.reaction" only. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- dict A mapping from sets of annotations to groups of reactions with those annotations. int The total number of unique reactions that are duplicated. """ duplicates = {} rxn_db_identifiers = ["metanetx.reaction", "kegg.reaction", "brenda", "rhea", "biocyc", "bigg.reaction"] # Build a list that associates a reaction with a set of its annotations. ann_rxns = [] for rxn in model.reactions: ann = [] for key in rxn_db_identifiers: if key in rxn.annotation: if isinstance(rxn.annotation[key], list): ann.extend([(key, elem) for elem in rxn.annotation[key]]) else: ann.append((key, rxn.annotation[key])) ann_rxns.append((rxn, frozenset(ann))) # Compute the intersection between annotations and record the matching # reaction identifiers. for (rxn_a, ann_a), (rxn_b, ann_b) in combinations(ann_rxns, 2): mutual_pair = tuple(ann_a & ann_b) if len(mutual_pair) > 0: duplicates.setdefault(mutual_pair, set()).update( [rxn_a.id, rxn_b.id]) # Transform the object for JSON compatibility num_duplicated = set() duplicated = {} for key in duplicates: # Object keys must be strings in JSON. new_key = ",".join(sorted("{}:{}".format(ns, term) for ns, term in key)) duplicated[new_key] = rxns = list(duplicates[key]) num_duplicated.update(rxns) return duplicated, len(num_duplicated)
python
def find_reactions_with_partially_identical_annotations(model): """ Return duplicate reactions based on identical annotation. Identify duplicate reactions globally by checking if any two metabolic reactions have the same entries in their annotation attributes. This can be useful to identify one 'type' of reactions that occurs in several compartments, to curate merged models or to clean-up bulk model modifications. The heuristic looks at annotations with the keys "metanetx.reaction", "kegg.reaction", "brenda", "rhea", "biocyc", "bigg.reaction" only. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- dict A mapping from sets of annotations to groups of reactions with those annotations. int The total number of unique reactions that are duplicated. """ duplicates = {} rxn_db_identifiers = ["metanetx.reaction", "kegg.reaction", "brenda", "rhea", "biocyc", "bigg.reaction"] # Build a list that associates a reaction with a set of its annotations. ann_rxns = [] for rxn in model.reactions: ann = [] for key in rxn_db_identifiers: if key in rxn.annotation: if isinstance(rxn.annotation[key], list): ann.extend([(key, elem) for elem in rxn.annotation[key]]) else: ann.append((key, rxn.annotation[key])) ann_rxns.append((rxn, frozenset(ann))) # Compute the intersection between annotations and record the matching # reaction identifiers. for (rxn_a, ann_a), (rxn_b, ann_b) in combinations(ann_rxns, 2): mutual_pair = tuple(ann_a & ann_b) if len(mutual_pair) > 0: duplicates.setdefault(mutual_pair, set()).update( [rxn_a.id, rxn_b.id]) # Transform the object for JSON compatibility num_duplicated = set() duplicated = {} for key in duplicates: # Object keys must be strings in JSON. new_key = ",".join(sorted("{}:{}".format(ns, term) for ns, term in key)) duplicated[new_key] = rxns = list(duplicates[key]) num_duplicated.update(rxns) return duplicated, len(num_duplicated)
[ "def", "find_reactions_with_partially_identical_annotations", "(", "model", ")", ":", "duplicates", "=", "{", "}", "rxn_db_identifiers", "=", "[", "\"metanetx.reaction\"", ",", "\"kegg.reaction\"", ",", "\"brenda\"", ",", "\"rhea\"", ",", "\"biocyc\"", ",", "\"bigg.reaction\"", "]", "# Build a list that associates a reaction with a set of its annotations.", "ann_rxns", "=", "[", "]", "for", "rxn", "in", "model", ".", "reactions", ":", "ann", "=", "[", "]", "for", "key", "in", "rxn_db_identifiers", ":", "if", "key", "in", "rxn", ".", "annotation", ":", "if", "isinstance", "(", "rxn", ".", "annotation", "[", "key", "]", ",", "list", ")", ":", "ann", ".", "extend", "(", "[", "(", "key", ",", "elem", ")", "for", "elem", "in", "rxn", ".", "annotation", "[", "key", "]", "]", ")", "else", ":", "ann", ".", "append", "(", "(", "key", ",", "rxn", ".", "annotation", "[", "key", "]", ")", ")", "ann_rxns", ".", "append", "(", "(", "rxn", ",", "frozenset", "(", "ann", ")", ")", ")", "# Compute the intersection between annotations and record the matching", "# reaction identifiers.", "for", "(", "rxn_a", ",", "ann_a", ")", ",", "(", "rxn_b", ",", "ann_b", ")", "in", "combinations", "(", "ann_rxns", ",", "2", ")", ":", "mutual_pair", "=", "tuple", "(", "ann_a", "&", "ann_b", ")", "if", "len", "(", "mutual_pair", ")", ">", "0", ":", "duplicates", ".", "setdefault", "(", "mutual_pair", ",", "set", "(", ")", ")", ".", "update", "(", "[", "rxn_a", ".", "id", ",", "rxn_b", ".", "id", "]", ")", "# Transform the object for JSON compatibility", "num_duplicated", "=", "set", "(", ")", "duplicated", "=", "{", "}", "for", "key", "in", "duplicates", ":", "# Object keys must be strings in JSON.", "new_key", "=", "\",\"", ".", "join", "(", "sorted", "(", "\"{}:{}\"", ".", "format", "(", "ns", ",", "term", ")", "for", "ns", ",", "term", "in", "key", ")", ")", "duplicated", "[", "new_key", "]", "=", "rxns", "=", "list", "(", "duplicates", "[", "key", "]", ")", "num_duplicated", ".", "update", "(", "rxns", ")", "return", "duplicated", ",", "len", "(", "num_duplicated", ")" ]
Return duplicate reactions based on identical annotation. Identify duplicate reactions globally by checking if any two metabolic reactions have the same entries in their annotation attributes. This can be useful to identify one 'type' of reactions that occurs in several compartments, to curate merged models or to clean-up bulk model modifications. The heuristic looks at annotations with the keys "metanetx.reaction", "kegg.reaction", "brenda", "rhea", "biocyc", "bigg.reaction" only. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- dict A mapping from sets of annotations to groups of reactions with those annotations. int The total number of unique reactions that are duplicated.
[ "Return", "duplicate", "reactions", "based", "on", "identical", "annotation", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L301-L356
train
Finds duplicate reactions based on identical annotations.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b1000 + 0o51) + chr(0b11011 + 0o26) + chr(55), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b10110 + 0o131) + '\062' + '\067' + chr(0b110100), 58829 - 58821), nzTpIcepk0o8(chr(48) + '\x6f' + chr(49) + chr(0b101010 + 0o11) + chr(0b101001 + 0o13), 0b1000), nzTpIcepk0o8(chr(113 - 65) + '\x6f' + chr(0b101001 + 0o11) + chr(2189 - 2135) + '\060', 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110101) + chr(820 - 772), 32172 - 32164), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110011) + chr(0b110010) + '\x31', ord("\x08")), nzTpIcepk0o8(chr(2220 - 2172) + chr(3412 - 3301) + chr(89 - 38) + chr(1599 - 1548) + chr(89 - 35), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(1600 - 1549) + chr(0b110001) + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(128 - 80) + chr(0b1101111) + '\x33' + chr(1661 - 1607) + chr(0b10100 + 0o36), 0b1000), nzTpIcepk0o8('\060' + chr(111) + '\x33' + chr(49) + chr(0b110111), 0o10), nzTpIcepk0o8('\x30' + chr(0b1000010 + 0o55) + chr(0b110011) + chr(1726 - 1677) + chr(1521 - 1472), ord("\x08")), nzTpIcepk0o8(chr(1774 - 1726) + chr(111) + '\065', 30783 - 30775), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x33' + chr(51) + chr(48), 0o10), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(0b101110 + 0o101) + chr(53) + chr(0b11101 + 0o31), 0o10), nzTpIcepk0o8('\060' + chr(0b11000 + 0o127) + '\063' + chr(0b110110) + chr(0b11 + 0o63), 61571 - 61563), nzTpIcepk0o8(chr(0b10010 + 0o36) + chr(0b1101111) + chr(1509 - 1458) + '\064', 0b1000), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(111) + '\x33' + chr(2489 - 2438) + '\062', 58738 - 58730), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x33' + '\066' + '\065', 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\064', 36723 - 36715), nzTpIcepk0o8(chr(1714 - 1666) + chr(111) + '\x31' + chr(0b100001 + 0o17) + chr(55), 49140 - 49132), nzTpIcepk0o8(chr(0b110000) + chr(0b1000011 + 0o54) + '\061' + chr(0b110101) + chr(48), 11933 - 11925), nzTpIcepk0o8(chr(48) + chr(111) + '\x32' + '\062' + '\060', 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + '\x33' + '\066' + chr(0b110111), 0o10), nzTpIcepk0o8('\060' + '\157' + '\x33' + chr(0b110101) + chr(0b110110), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1011100 + 0o23) + chr(0b1011 + 0o47) + '\x33' + chr(49), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x31' + chr(0b10010 + 0o45) + chr(55), 0o10), nzTpIcepk0o8(chr(48) + chr(10016 - 9905) + '\061' + '\065' + chr(1230 - 1181), 0o10), nzTpIcepk0o8(chr(2237 - 2189) + '\x6f' + '\061' + chr(0b110101) + chr(50), 47984 - 47976), nzTpIcepk0o8(chr(48) + chr(3292 - 3181) + chr(0b100011 + 0o16) + chr(0b110110) + chr(50), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b100110 + 0o111) + '\062' + chr(50), 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(0b110001) + chr(0b1111 + 0o42) + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1194 - 1145) + chr(0b110111) + '\x34', 53548 - 53540), nzTpIcepk0o8('\x30' + chr(111) + chr(1639 - 1589) + chr(2090 - 2041) + chr(49), 31784 - 31776), nzTpIcepk0o8(chr(0b100111 + 0o11) + chr(11054 - 10943) + '\062' + '\x37' + '\065', 22046 - 22038), nzTpIcepk0o8(chr(0b110000) + chr(0b1100101 + 0o12) + chr(0b110001) + '\x33' + chr(0b111 + 0o56), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b110001 + 0o76) + chr(49) + chr(1013 - 958) + chr(0b110100), 8), nzTpIcepk0o8(chr(1375 - 1327) + '\x6f' + chr(0b110010 + 0o1) + chr(1482 - 1432) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(8056 - 7945) + chr(0b1001 + 0o52) + '\063' + chr(0b1011 + 0o45), 8), nzTpIcepk0o8('\060' + '\x6f' + chr(53) + '\x35', 0o10), nzTpIcepk0o8(chr(0b11001 + 0o27) + '\x6f' + chr(0b110111) + chr(0b1101 + 0o45), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b100 + 0o54) + '\x6f' + chr(0b10 + 0o63) + '\x30', 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'a'), chr(1193 - 1093) + chr(101) + '\143' + chr(4582 - 4471) + chr(0b111 + 0o135) + chr(1362 - 1261))('\165' + chr(0b110000 + 0o104) + chr(6046 - 5944) + chr(419 - 374) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def ecDLhfb4P8O6(KW0sEfjlgNpM): I9sz1GWxe0jB = {} hpNrqI3UMLQ1 = [roI3spqORKae(ES5oEprVxulp(b'"\xd9(\xd1F\xb4\xaa\xb3\xdc\xbd\xacd\xbbZ\x9fs\xb4'), chr(0b111011 + 0o51) + '\x65' + chr(99) + '\x6f' + chr(6919 - 6819) + chr(0b100 + 0o141))(chr(117) + '\x74' + chr(0b1000 + 0o136) + chr(205 - 160) + chr(0b1001 + 0o57)), roI3spqORKae(ES5oEprVxulp(b'$\xd9;\xd7\x06\xa3\xbb\xaa\x91\xbb\xa0j\xb6'), chr(0b111111 + 0o45) + '\145' + chr(99) + chr(111) + chr(0b11010 + 0o112) + '\145')('\x75' + chr(9548 - 9432) + '\146' + '\x2d' + '\x38'), roI3spqORKae(ES5oEprVxulp(b'-\xce9\xdeL\xb0'), chr(6795 - 6695) + chr(0b1100000 + 0o5) + chr(0b1100011) + chr(0b1010000 + 0o37) + chr(0b1001101 + 0o27) + chr(0b1100101))(chr(117) + chr(0b1110100) + chr(0b1010101 + 0o21) + '\055' + '\070'), roI3spqORKae(ES5oEprVxulp(b'=\xd49\xd1'), chr(100) + chr(0b110100 + 0o61) + chr(0b100111 + 0o74) + chr(0b1101111) + '\144' + '\x65')(chr(0b1001110 + 0o47) + chr(7764 - 7648) + '\146' + chr(1712 - 1667) + '\070'), roI3spqORKae(ES5oEprVxulp(b'-\xd53\xd3Q\xb2'), chr(100) + '\145' + '\x63' + chr(0b111000 + 0o67) + chr(100) + '\145')(chr(6143 - 6026) + '\x74' + chr(102) + chr(0b101101) + '\x38'), roI3spqORKae(ES5oEprVxulp(b'-\xd5;\xd7\x06\xa3\xbb\xaa\x91\xbb\xa0j\xb6'), '\x64' + chr(0b1100101) + chr(0b1100011) + '\157' + '\144' + '\145')('\x75' + chr(1346 - 1230) + chr(10096 - 9994) + chr(0b101101) + '\070')] mx8qsyesChdC = [] for cXXyzqlAJbZW in roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'=\xd9=\xd3\\\xb8\xb1\xa5\x81'), chr(2540 - 2440) + chr(101) + chr(4099 - 4000) + chr(0b1101111) + chr(0b1100100) + chr(0b1100010 + 0o3))(chr(0b100111 + 0o116) + '\164' + chr(3442 - 3340) + chr(0b101101) + chr(0b1101 + 0o53))): K1YkoIOxaZYV = [] for QYodcsDtoGq7 in hpNrqI3UMLQ1: if QYodcsDtoGq7 in roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'.\xd22\xdf\\\xb0\xaa\xa2\x9d\xa1'), chr(0b1001101 + 0o27) + chr(101) + '\x63' + '\157' + chr(100) + chr(0b1100101))(chr(0b10110 + 0o137) + chr(145 - 29) + chr(8531 - 8429) + chr(800 - 755) + chr(0b111000))): if suIjIS24Zkqw(roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'.\xd22\xdf\\\xb0\xaa\xa2\x9d\xa1'), chr(0b1100100) + '\x65' + chr(0b11 + 0o140) + chr(111) + chr(5458 - 5358) + '\145')(chr(117) + '\164' + chr(0b1100110) + chr(0b11000 + 0o25) + chr(56)))[QYodcsDtoGq7], H4NoA26ON7iG): roI3spqORKae(K1YkoIOxaZYV, roI3spqORKae(ES5oEprVxulp(b'\x1b\xe3o\xfdG\xb5\x92\x9c\xad\x8d\xabt'), chr(0b1100100) + chr(0b1100101) + chr(0b1100011) + chr(5093 - 4982) + chr(0b1100100) + '\x65')(chr(117) + chr(1186 - 1070) + '\x66' + chr(0b10001 + 0o34) + chr(56)))([(QYodcsDtoGq7, Ge7qqaux3bQW) for Ge7qqaux3bQW in roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'.\xd22\xdf\\\xb0\xaa\xa2\x9d\xa1'), '\144' + '\145' + chr(0b1000001 + 0o42) + chr(111) + '\x64' + chr(0b1100101))(chr(1141 - 1024) + chr(116) + chr(449 - 347) + chr(45) + chr(0b101 + 0o63)))[QYodcsDtoGq7]]) else: roI3spqORKae(K1YkoIOxaZYV, roI3spqORKae(ES5oEprVxulp(b'\x07\xe8\x0f\x84P\xb6\x99\xa4\x98\xa0\x9c0'), chr(9258 - 9158) + chr(101) + chr(0b1100011) + chr(4845 - 4734) + chr(5471 - 5371) + chr(101))(chr(0b1110101) + '\164' + chr(0b1010 + 0o134) + chr(0b11000 + 0o25) + chr(0b111000)))((QYodcsDtoGq7, roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'.\xd22\xdf\\\xb0\xaa\xa2\x9d\xa1'), chr(100) + '\145' + chr(99) + '\x6f' + chr(0b1100100) + chr(101))('\165' + '\164' + chr(7368 - 7266) + chr(45) + '\x38'))[QYodcsDtoGq7])) roI3spqORKae(mx8qsyesChdC, roI3spqORKae(ES5oEprVxulp(b'\x07\xe8\x0f\x84P\xb6\x99\xa4\x98\xa0\x9c0'), chr(6698 - 6598) + chr(1676 - 1575) + chr(8427 - 8328) + '\157' + chr(100) + '\x65')('\x75' + '\x74' + '\146' + chr(0b100011 + 0o12) + '\x38'))((cXXyzqlAJbZW, PNaRkv8AjHWU(K1YkoIOxaZYV))) for ((Z2kNgFUpOEXr, TTMHDEIPGCtC), (hzi3HgXTUwkf, Pw4B2lHQdg0Q)) in u9j1YIgP0mZI(mx8qsyesChdC, nzTpIcepk0o8(chr(0b11101 + 0o23) + '\x6f' + '\x32', ord("\x08"))): kcD2SklJJKQN = nfNqtJL5aRaY(TTMHDEIPGCtC & Pw4B2lHQdg0Q) if ftfygxgFas5X(kcD2SklJJKQN) > nzTpIcepk0o8(chr(48) + '\x6f' + chr(1766 - 1718), 0o10): roI3spqORKae(I9sz1GWxe0jB.setdefault(kcD2SklJJKQN, Bvi71nNyvlqO()), roI3spqORKae(ES5oEprVxulp(b'\x05\xe37\x82a\x88\x9c\xfa\x91\xaa\xb8k'), chr(0b1100100) + '\145' + chr(0b11111 + 0o104) + chr(111) + chr(8937 - 8837) + chr(5890 - 5789))(chr(0b1110101) + chr(116) + chr(0b110000 + 0o66) + chr(45) + chr(0b110001 + 0o7)))([roI3spqORKae(Z2kNgFUpOEXr, roI3spqORKae(ES5oEprVxulp(b'"\xdd\x10\xded\xb6\xe6\x84\xc7\xb5\x99Q'), '\x64' + '\145' + chr(0b1010110 + 0o15) + '\x6f' + chr(100) + chr(0b1001 + 0o134))(chr(3042 - 2925) + '\164' + chr(102) + chr(0b1111 + 0o36) + '\070')), roI3spqORKae(hzi3HgXTUwkf, roI3spqORKae(ES5oEprVxulp(b'"\xdd\x10\xded\xb6\xe6\x84\xc7\xb5\x99Q'), chr(100) + chr(0b1100101) + chr(5503 - 5404) + chr(111) + chr(100) + '\145')(chr(117) + '\x74' + chr(102) + chr(1374 - 1329) + chr(1070 - 1014)))]) whMg4joQbpQr = Bvi71nNyvlqO() dUhYQ1m6A9Z6 = {} for QYodcsDtoGq7 in I9sz1GWxe0jB: VzXAKXWSgBLn = roI3spqORKae(ES5oEprVxulp(b'c'), chr(0b1100100) + chr(7664 - 7563) + '\x63' + chr(0b1101111) + chr(9302 - 9202) + chr(101))(chr(12679 - 12562) + '\x74' + chr(0b11100 + 0o112) + chr(45) + '\x38').Y4yM9BcfTCNq(V3OlOVg98A85((roI3spqORKae(ES5oEprVxulp(b'4\xc1f\xcbU'), '\x64' + '\x65' + '\143' + chr(10647 - 10536) + chr(100) + chr(0b1100101))('\165' + chr(11490 - 11374) + chr(6452 - 6350) + chr(45) + chr(0b1110 + 0o52)).q33KG3foQ_CJ(wQTt89KeAP42, rBf5nrUzE7I0) for (wQTt89KeAP42, rBf5nrUzE7I0) in QYodcsDtoGq7))) dUhYQ1m6A9Z6[VzXAKXWSgBLn] = im1gnkmv3KCd = H4NoA26ON7iG(I9sz1GWxe0jB[QYodcsDtoGq7]) roI3spqORKae(whMg4joQbpQr, roI3spqORKae(ES5oEprVxulp(b'\x05\xe37\x82a\x88\x9c\xfa\x91\xaa\xb8k'), chr(0b1000100 + 0o40) + chr(0b100100 + 0o101) + '\x63' + chr(0b1101111) + '\144' + chr(0b1100101))('\165' + '\164' + chr(0b10100 + 0o122) + chr(48 - 3) + chr(56)))(im1gnkmv3KCd) return (dUhYQ1m6A9Z6, ftfygxgFas5X(whMg4joQbpQr))
opencobra/memote
memote/support/basic.py
map_metabolites_to_structures
def map_metabolites_to_structures(metabolites, compartments): """ Map metabolites from the identifier namespace to structural space. Metabolites who lack structural annotation (InChI or InChIKey) are ignored. Parameters ---------- metabolites : iterable The cobra.Metabolites to map. compartments : iterable The different compartments to consider. Structures are treated separately for each compartment. Returns ------- dict A mapping from a cobra.Metabolite to its compartment specific structure index. """ # TODO (Moritz Beber): Consider SMILES? unique_identifiers = ["inchikey", "inchi"] met2mol = {} molecules = {c: [] for c in compartments} for met in metabolites: ann = [] for key in unique_identifiers: mol = met.annotation.get(key) if mol is not None: ann.append(mol) # Ignore metabolites without the required information. if len(ann) == 0: continue ann = set(ann) # Compare with other structures in the same compartment. mols = molecules[met.compartment] for i, mol_group in enumerate(mols): if len(ann & mol_group) > 0: mol_group.update(ann) # We map to the index of the group because it is hashable and # cheaper to compare later. met2mol[met] = "{}-{}".format(met.compartment, i) break if met not in met2mol: # The length of the list corresponds to the 0-index after appending. met2mol[met] = "{}-{}".format(met.compartment, len(mols)) mols.append(ann) return met2mol
python
def map_metabolites_to_structures(metabolites, compartments): """ Map metabolites from the identifier namespace to structural space. Metabolites who lack structural annotation (InChI or InChIKey) are ignored. Parameters ---------- metabolites : iterable The cobra.Metabolites to map. compartments : iterable The different compartments to consider. Structures are treated separately for each compartment. Returns ------- dict A mapping from a cobra.Metabolite to its compartment specific structure index. """ # TODO (Moritz Beber): Consider SMILES? unique_identifiers = ["inchikey", "inchi"] met2mol = {} molecules = {c: [] for c in compartments} for met in metabolites: ann = [] for key in unique_identifiers: mol = met.annotation.get(key) if mol is not None: ann.append(mol) # Ignore metabolites without the required information. if len(ann) == 0: continue ann = set(ann) # Compare with other structures in the same compartment. mols = molecules[met.compartment] for i, mol_group in enumerate(mols): if len(ann & mol_group) > 0: mol_group.update(ann) # We map to the index of the group because it is hashable and # cheaper to compare later. met2mol[met] = "{}-{}".format(met.compartment, i) break if met not in met2mol: # The length of the list corresponds to the 0-index after appending. met2mol[met] = "{}-{}".format(met.compartment, len(mols)) mols.append(ann) return met2mol
[ "def", "map_metabolites_to_structures", "(", "metabolites", ",", "compartments", ")", ":", "# TODO (Moritz Beber): Consider SMILES?", "unique_identifiers", "=", "[", "\"inchikey\"", ",", "\"inchi\"", "]", "met2mol", "=", "{", "}", "molecules", "=", "{", "c", ":", "[", "]", "for", "c", "in", "compartments", "}", "for", "met", "in", "metabolites", ":", "ann", "=", "[", "]", "for", "key", "in", "unique_identifiers", ":", "mol", "=", "met", ".", "annotation", ".", "get", "(", "key", ")", "if", "mol", "is", "not", "None", ":", "ann", ".", "append", "(", "mol", ")", "# Ignore metabolites without the required information.", "if", "len", "(", "ann", ")", "==", "0", ":", "continue", "ann", "=", "set", "(", "ann", ")", "# Compare with other structures in the same compartment.", "mols", "=", "molecules", "[", "met", ".", "compartment", "]", "for", "i", ",", "mol_group", "in", "enumerate", "(", "mols", ")", ":", "if", "len", "(", "ann", "&", "mol_group", ")", ">", "0", ":", "mol_group", ".", "update", "(", "ann", ")", "# We map to the index of the group because it is hashable and", "# cheaper to compare later.", "met2mol", "[", "met", "]", "=", "\"{}-{}\"", ".", "format", "(", "met", ".", "compartment", ",", "i", ")", "break", "if", "met", "not", "in", "met2mol", ":", "# The length of the list corresponds to the 0-index after appending.", "met2mol", "[", "met", "]", "=", "\"{}-{}\"", ".", "format", "(", "met", ".", "compartment", ",", "len", "(", "mols", ")", ")", "mols", ".", "append", "(", "ann", ")", "return", "met2mol" ]
Map metabolites from the identifier namespace to structural space. Metabolites who lack structural annotation (InChI or InChIKey) are ignored. Parameters ---------- metabolites : iterable The cobra.Metabolites to map. compartments : iterable The different compartments to consider. Structures are treated separately for each compartment. Returns ------- dict A mapping from a cobra.Metabolite to its compartment specific structure index.
[ "Map", "metabolites", "from", "the", "identifier", "namespace", "to", "structural", "space", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L359-L407
train
Maps metabolites to structural space indexes.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(152 - 41) + chr(0b11100 + 0o30) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\061' + chr(0b101000 + 0o17) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(0b101100 + 0o4) + chr(5006 - 4895) + chr(730 - 679) + chr(0b101110 + 0o10) + chr(1895 - 1843), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(50) + chr(2359 - 2309) + chr(0b10010 + 0o42), ord("\x08")), nzTpIcepk0o8(chr(881 - 833) + chr(5647 - 5536) + chr(0b110011) + chr(0b110101) + chr(2505 - 2452), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110011) + '\067' + chr(0b100111 + 0o17), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101010 + 0o5) + '\x32' + chr(1720 - 1668) + chr(50), 44381 - 44373), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(50) + chr(496 - 442) + chr(54), 0b1000), nzTpIcepk0o8(chr(0b101011 + 0o5) + '\x6f' + chr(0b110001) + '\x34' + chr(48), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(2247 - 2198) + chr(51) + chr(0b100101 + 0o14), 0o10), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(0b100000 + 0o117) + chr(0b101010 + 0o11) + chr(138 - 89) + chr(53), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(2138 - 2087) + '\x31', 0o10), nzTpIcepk0o8(chr(2268 - 2220) + chr(0b1101111) + '\063' + chr(0b110001) + chr(0b100110 + 0o13), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(2176 - 2127) + chr(0b110101) + chr(2240 - 2186), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b11101 + 0o122) + '\x31' + '\062' + chr(54), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(1778 - 1667) + chr(49) + '\067', 24123 - 24115), nzTpIcepk0o8('\x30' + chr(2654 - 2543) + '\063' + chr(0b110001) + '\x34', 0o10), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(4260 - 4149) + chr(0b110001) + chr(0b110001) + '\066', 0b1000), nzTpIcepk0o8(chr(399 - 351) + chr(6731 - 6620) + chr(49) + chr(0b0 + 0o63) + chr(0b110001), 8), nzTpIcepk0o8('\x30' + '\x6f' + '\067' + chr(0b10110 + 0o36), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b11000 + 0o31) + chr(55) + '\065', 24177 - 24169), nzTpIcepk0o8(chr(0b10111 + 0o31) + '\157' + chr(0b110011) + '\x37' + chr(55), 0o10), nzTpIcepk0o8('\060' + chr(111) + '\x32' + '\x30' + chr(49), 29770 - 29762), nzTpIcepk0o8('\x30' + chr(111) + chr(0b1000 + 0o52) + '\062' + '\065', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(12065 - 11954) + '\x33' + '\x31' + '\x37', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + chr(1820 - 1770) + '\x37' + '\062', ord("\x08")), nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(111) + '\061' + chr(53) + chr(1658 - 1606), 0o10), nzTpIcepk0o8(chr(734 - 686) + '\x6f' + '\063' + '\x33' + '\061', ord("\x08")), nzTpIcepk0o8(chr(506 - 458) + chr(111) + chr(0b10110 + 0o36) + chr(0b11101 + 0o30), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\064' + chr(0b110010), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(0b10001 + 0o40) + chr(0b110100) + chr(2833 - 2779), 0b1000), nzTpIcepk0o8('\x30' + chr(0b101011 + 0o104) + chr(0b110010 + 0o0) + chr(0b1001 + 0o53) + chr(0b110000), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110010) + '\061' + chr(52), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b10000 + 0o137) + chr(1628 - 1578) + chr(0b110000) + '\x34', 0o10), nzTpIcepk0o8(chr(609 - 561) + chr(0b1000010 + 0o55) + chr(50) + chr(54) + '\061', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1010010 + 0o35) + chr(1096 - 1047) + chr(0b11010 + 0o33) + '\063', 50680 - 50672), nzTpIcepk0o8(chr(0b10111 + 0o31) + '\157' + chr(1485 - 1434) + '\060' + chr(0b110010), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(55) + chr(49), 54121 - 54113), nzTpIcepk0o8(chr(656 - 608) + chr(9892 - 9781) + chr(0b110010) + chr(814 - 760) + '\065', 57973 - 57965), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b100011 + 0o17) + chr(51) + '\x37', 10469 - 10461)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(1314 - 1203) + chr(0b110101) + chr(0b110000), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\r'), '\144' + chr(101) + chr(99) + chr(111) + chr(0b1100100) + chr(101))(chr(9040 - 8923) + chr(116) + chr(102) + chr(340 - 295) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Ap5q9WRwU1P9(nEF0RXSdESqB, vDO5YkrPKpjA): losiH5HHPoxj = [roI3spqORKae(ES5oEprVxulp(b'J\x14\x97\xfc\x84\x95\xc7\xcf'), chr(8055 - 7955) + chr(0b11000 + 0o115) + chr(0b111 + 0o134) + chr(0b1101111) + chr(475 - 375) + chr(9817 - 9716))(chr(0b1110101) + '\x74' + chr(102) + '\x2d' + chr(0b101000 + 0o20)), roI3spqORKae(ES5oEprVxulp(b'J\x14\x97\xfc\x84'), chr(100) + chr(101) + '\143' + '\157' + '\x64' + chr(908 - 807))('\x75' + '\164' + chr(0b10110 + 0o120) + chr(0b101101) + '\070')] zSYIqIaCNRTS = {} cstjivQK6TuE = {teUmM7cKWZUa: [] for teUmM7cKWZUa in vDO5YkrPKpjA} for dYApxmRvGyhb in nEF0RXSdESqB: K1YkoIOxaZYV = [] for QYodcsDtoGq7 in losiH5HHPoxj: jP1HCbWbR33Y = dYApxmRvGyhb.annotation.GUKetu4xaGsJ(QYodcsDtoGq7) if jP1HCbWbR33Y is not None: roI3spqORKae(K1YkoIOxaZYV, roI3spqORKae(ES5oEprVxulp(b'k.\xa7\xa0\x95\x99\xe5\xd9\n6\x98,'), '\144' + chr(3480 - 3379) + chr(4833 - 4734) + chr(0b1101111) + chr(0b111101 + 0o47) + chr(101))(chr(0b1110101) + chr(0b1110100) + '\x66' + chr(0b10001 + 0o34) + chr(249 - 193)))(jP1HCbWbR33Y) if ftfygxgFas5X(K1YkoIOxaZYV) == nzTpIcepk0o8(chr(48) + chr(0b1101100 + 0o3) + chr(0b110000), 0o10): continue K1YkoIOxaZYV = Bvi71nNyvlqO(K1YkoIOxaZYV) WDcSYdDeoBaK = cstjivQK6TuE[dYApxmRvGyhb.WV7udppUv0vM] for (ZlbFMSG8gCoF, v33NE_TeI2Lk) in _kV_Bomx8PZ4(WDcSYdDeoBaK): if ftfygxgFas5X(K1YkoIOxaZYV & v33NE_TeI2Lk) > nzTpIcepk0o8(chr(0b110000) + chr(9811 - 9700) + '\x30', 8): roI3spqORKae(v33NE_TeI2Lk, roI3spqORKae(ES5oEprVxulp(b'i%\x9f\xa6\xa4\xa7\xe0\x87\x03<\xbcw'), chr(0b1100100) + chr(5042 - 4941) + '\143' + '\157' + '\144' + '\145')(chr(0b1001100 + 0o51) + chr(0b110111 + 0o75) + '\146' + chr(1234 - 1189) + chr(0b111000)))(K1YkoIOxaZYV) zSYIqIaCNRTS[dYApxmRvGyhb] = roI3spqORKae(ES5oEprVxulp(b'X\x07\xd9\xef\x90'), '\144' + chr(2020 - 1919) + chr(280 - 181) + '\157' + chr(100) + '\x65')(chr(0b1110101) + chr(116) + chr(102) + '\055' + chr(56)).q33KG3foQ_CJ(dYApxmRvGyhb.WV7udppUv0vM, ZlbFMSG8gCoF) break if dYApxmRvGyhb not in zSYIqIaCNRTS: zSYIqIaCNRTS[dYApxmRvGyhb] = roI3spqORKae(ES5oEprVxulp(b'X\x07\xd9\xef\x90'), '\144' + chr(0b1100101) + chr(0b101000 + 0o73) + '\x6f' + chr(0b11011 + 0o111) + chr(101))(chr(0b110111 + 0o76) + chr(3731 - 3615) + chr(0b1100110) + chr(45) + '\070').q33KG3foQ_CJ(dYApxmRvGyhb.WV7udppUv0vM, ftfygxgFas5X(WDcSYdDeoBaK)) roI3spqORKae(WDcSYdDeoBaK, roI3spqORKae(ES5oEprVxulp(b'k.\xa7\xa0\x95\x99\xe5\xd9\n6\x98,'), chr(100) + '\145' + '\143' + '\157' + '\144' + chr(0b1100101))(chr(0b1110001 + 0o4) + '\164' + '\x66' + '\x2d' + '\x38'))(K1YkoIOxaZYV) return zSYIqIaCNRTS
opencobra/memote
memote/support/basic.py
find_duplicate_reactions
def find_duplicate_reactions(model): """ Return a list with pairs of reactions that are functionally identical. Identify duplicate reactions globally by checking if any two reactions have the same metabolites, same directionality and are in the same compartment. This can be useful to curate merged models or to clean-up bulk model modifications. The heuristic compares reactions in a pairwise manner. For each reaction, the metabolite annotations are checked for a description of the structure (via InChI and InChIKey).If they exist, substrates and products as well as the stoichiometries of any reaction pair are compared. Only reactions where the substrates, products, stoichiometry and reversibility are identical are considered to be duplicates. This test will not be able to identify duplicate reactions if there are no structure annotations. Further, it will report reactions with differing bounds as equal if they otherwise match the above conditions. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list A list of pairs of duplicate reactions based on metabolites. int The number of unique reactions that have a duplicates """ met2mol = map_metabolites_to_structures(model.metabolites, model.compartments) # Build a list associating reactions with their stoichiometry in molecular # structure space. structural = [] for rxn in model.reactions: # Ignore reactions that have metabolites without structures. if not all(met in met2mol for met in rxn.metabolites): continue # We consider substrates and products separately since, for example, # the InChI for H2O and OH is the same. substrates = { met2mol[met]: rxn.get_coefficient(met) for met in rxn.reactants } products = { met2mol[met]: rxn.get_coefficient(met) for met in rxn.products } structural.append((rxn, substrates, products)) # Compare reactions using their structure-based stoichiometries. num_duplicated = set() duplicates = [] for (rxn_a, sub_a, prod_a), (rxn_b, sub_b, prod_b) in combinations( structural, 2): # Compare the substrates. if sub_a != sub_b: continue # Compare the products. if prod_a != prod_b: continue # Compare whether they are both (ir-)reversible. if rxn_a.reversibility != rxn_b.reversibility: continue # TODO (Moritz Beber): We could compare bounds here but it might be # worth knowing about the reactions even if their bounds differ? duplicates.append((rxn_a.id, rxn_b.id)) num_duplicated.add(rxn_a.id) num_duplicated.add(rxn_b.id) return duplicates, len(num_duplicated)
python
def find_duplicate_reactions(model): """ Return a list with pairs of reactions that are functionally identical. Identify duplicate reactions globally by checking if any two reactions have the same metabolites, same directionality and are in the same compartment. This can be useful to curate merged models or to clean-up bulk model modifications. The heuristic compares reactions in a pairwise manner. For each reaction, the metabolite annotations are checked for a description of the structure (via InChI and InChIKey).If they exist, substrates and products as well as the stoichiometries of any reaction pair are compared. Only reactions where the substrates, products, stoichiometry and reversibility are identical are considered to be duplicates. This test will not be able to identify duplicate reactions if there are no structure annotations. Further, it will report reactions with differing bounds as equal if they otherwise match the above conditions. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list A list of pairs of duplicate reactions based on metabolites. int The number of unique reactions that have a duplicates """ met2mol = map_metabolites_to_structures(model.metabolites, model.compartments) # Build a list associating reactions with their stoichiometry in molecular # structure space. structural = [] for rxn in model.reactions: # Ignore reactions that have metabolites without structures. if not all(met in met2mol for met in rxn.metabolites): continue # We consider substrates and products separately since, for example, # the InChI for H2O and OH is the same. substrates = { met2mol[met]: rxn.get_coefficient(met) for met in rxn.reactants } products = { met2mol[met]: rxn.get_coefficient(met) for met in rxn.products } structural.append((rxn, substrates, products)) # Compare reactions using their structure-based stoichiometries. num_duplicated = set() duplicates = [] for (rxn_a, sub_a, prod_a), (rxn_b, sub_b, prod_b) in combinations( structural, 2): # Compare the substrates. if sub_a != sub_b: continue # Compare the products. if prod_a != prod_b: continue # Compare whether they are both (ir-)reversible. if rxn_a.reversibility != rxn_b.reversibility: continue # TODO (Moritz Beber): We could compare bounds here but it might be # worth knowing about the reactions even if their bounds differ? duplicates.append((rxn_a.id, rxn_b.id)) num_duplicated.add(rxn_a.id) num_duplicated.add(rxn_b.id) return duplicates, len(num_duplicated)
[ "def", "find_duplicate_reactions", "(", "model", ")", ":", "met2mol", "=", "map_metabolites_to_structures", "(", "model", ".", "metabolites", ",", "model", ".", "compartments", ")", "# Build a list associating reactions with their stoichiometry in molecular", "# structure space.", "structural", "=", "[", "]", "for", "rxn", "in", "model", ".", "reactions", ":", "# Ignore reactions that have metabolites without structures.", "if", "not", "all", "(", "met", "in", "met2mol", "for", "met", "in", "rxn", ".", "metabolites", ")", ":", "continue", "# We consider substrates and products separately since, for example,", "# the InChI for H2O and OH is the same.", "substrates", "=", "{", "met2mol", "[", "met", "]", ":", "rxn", ".", "get_coefficient", "(", "met", ")", "for", "met", "in", "rxn", ".", "reactants", "}", "products", "=", "{", "met2mol", "[", "met", "]", ":", "rxn", ".", "get_coefficient", "(", "met", ")", "for", "met", "in", "rxn", ".", "products", "}", "structural", ".", "append", "(", "(", "rxn", ",", "substrates", ",", "products", ")", ")", "# Compare reactions using their structure-based stoichiometries.", "num_duplicated", "=", "set", "(", ")", "duplicates", "=", "[", "]", "for", "(", "rxn_a", ",", "sub_a", ",", "prod_a", ")", ",", "(", "rxn_b", ",", "sub_b", ",", "prod_b", ")", "in", "combinations", "(", "structural", ",", "2", ")", ":", "# Compare the substrates.", "if", "sub_a", "!=", "sub_b", ":", "continue", "# Compare the products.", "if", "prod_a", "!=", "prod_b", ":", "continue", "# Compare whether they are both (ir-)reversible.", "if", "rxn_a", ".", "reversibility", "!=", "rxn_b", ".", "reversibility", ":", "continue", "# TODO (Moritz Beber): We could compare bounds here but it might be", "# worth knowing about the reactions even if their bounds differ?", "duplicates", ".", "append", "(", "(", "rxn_a", ".", "id", ",", "rxn_b", ".", "id", ")", ")", "num_duplicated", ".", "add", "(", "rxn_a", ".", "id", ")", "num_duplicated", ".", "add", "(", "rxn_b", ".", "id", ")", "return", "duplicates", ",", "len", "(", "num_duplicated", ")" ]
Return a list with pairs of reactions that are functionally identical. Identify duplicate reactions globally by checking if any two reactions have the same metabolites, same directionality and are in the same compartment. This can be useful to curate merged models or to clean-up bulk model modifications. The heuristic compares reactions in a pairwise manner. For each reaction, the metabolite annotations are checked for a description of the structure (via InChI and InChIKey).If they exist, substrates and products as well as the stoichiometries of any reaction pair are compared. Only reactions where the substrates, products, stoichiometry and reversibility are identical are considered to be duplicates. This test will not be able to identify duplicate reactions if there are no structure annotations. Further, it will report reactions with differing bounds as equal if they otherwise match the above conditions. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- list A list of pairs of duplicate reactions based on metabolites. int The number of unique reactions that have a duplicates
[ "Return", "a", "list", "with", "pairs", "of", "reactions", "that", "are", "functionally", "identical", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L410-L479
train
Find duplicate reactions in a single structure.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(10079 - 9968) + '\063' + '\x30', 0b1000), nzTpIcepk0o8('\x30' + chr(516 - 405) + chr(50) + chr(0b101011 + 0o7) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(965 - 917) + chr(4239 - 4128) + chr(0b110010) + '\065', ord("\x08")), nzTpIcepk0o8(chr(1572 - 1524) + '\x6f' + chr(50) + '\x32' + chr(1598 - 1547), 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(50) + chr(0b1 + 0o64) + '\x36', 16178 - 16170), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001) + '\063' + '\065', ord("\x08")), nzTpIcepk0o8('\060' + chr(6349 - 6238) + '\061', 0b1000), nzTpIcepk0o8(chr(0b100100 + 0o14) + '\x6f' + '\x33' + chr(0b110011) + '\060', 40774 - 40766), nzTpIcepk0o8(chr(2045 - 1997) + chr(0b1010111 + 0o30) + chr(51) + chr(1590 - 1537) + chr(0b110110), 0o10), nzTpIcepk0o8('\060' + '\157' + '\x31' + chr(50) + '\x32', 0b1000), nzTpIcepk0o8('\x30' + '\157' + '\x33' + chr(0b110010) + '\x37', 21261 - 21253), nzTpIcepk0o8(chr(48) + '\157' + chr(0b10010 + 0o40) + '\061' + '\065', 0b1000), nzTpIcepk0o8(chr(0b1011 + 0o45) + '\157' + chr(0b100010 + 0o17) + '\x31' + chr(1898 - 1845), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110111) + chr(55), 0o10), nzTpIcepk0o8(chr(134 - 86) + '\x6f' + chr(619 - 568) + '\060', 8), nzTpIcepk0o8(chr(0b110000) + chr(0b110000 + 0o77) + chr(0b110011) + '\x30' + chr(0b11111 + 0o21), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b111010 + 0o65) + chr(1195 - 1143) + chr(0b110000 + 0o0), 8094 - 8086), nzTpIcepk0o8('\x30' + chr(2221 - 2110) + '\062' + '\x30' + chr(0b110100), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(2371 - 2317) + '\064', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1000 + 0o147) + '\x33' + chr(0b110011 + 0o0) + chr(0b10011 + 0o35), 8), nzTpIcepk0o8(chr(476 - 428) + chr(6364 - 6253) + '\062' + '\x30' + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(249 - 201) + chr(111) + chr(0b1101 + 0o44) + chr(51) + chr(52), 0b1000), nzTpIcepk0o8('\060' + chr(1090 - 979) + '\x32' + chr(0b10100 + 0o37) + chr(0b110100), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110001) + '\x36' + chr(0b11011 + 0o32), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b110001) + chr(0b100100 + 0o21) + chr(48), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b10100 + 0o35) + '\060' + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(50) + chr(0b11110 + 0o24) + chr(0b1011 + 0o50), 8), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\061' + '\061' + '\x31', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1001111 + 0o40) + '\061' + '\067' + '\067', 24883 - 24875), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\061' + chr(54) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b11000 + 0o33) + '\062' + chr(0b10011 + 0o40), 0b1000), nzTpIcepk0o8(chr(1436 - 1388) + chr(0b101110 + 0o101) + chr(49) + '\x31' + '\060', 0o10), nzTpIcepk0o8(chr(0b11100 + 0o24) + '\x6f' + chr(274 - 225) + '\x30' + chr(0b1011 + 0o53), 8), nzTpIcepk0o8(chr(204 - 156) + chr(0b1101111) + chr(0b110011) + chr(577 - 523) + '\062', 0o10), nzTpIcepk0o8('\060' + chr(12010 - 11899) + chr(0b11100 + 0o33) + '\062', 0b1000), nzTpIcepk0o8(chr(48) + chr(8532 - 8421) + chr(0b110001) + chr(948 - 900), 45850 - 45842), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b10001 + 0o46) + '\063', 0b1000), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(774 - 663) + '\x31' + chr(356 - 303) + chr(0b11 + 0o56), ord("\x08")), nzTpIcepk0o8(chr(1551 - 1503) + chr(1968 - 1857) + '\x33' + '\x34' + chr(51), 0o10), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(0b1101111) + '\x32' + '\063' + chr(1340 - 1289), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110101) + chr(0b10000 + 0o40), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'6'), chr(100) + '\145' + chr(0b1100011) + '\x6f' + '\x64' + '\x65')('\165' + '\164' + '\146' + '\x2d' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def pw_ZkYWbKeb4(KW0sEfjlgNpM): zSYIqIaCNRTS = Ap5q9WRwU1P9(KW0sEfjlgNpM.metabolites, KW0sEfjlgNpM.compartments) uKYfp3Y7RwwL = [] for cXXyzqlAJbZW in roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'j\xf1t\xf0\xda4n\xb6\x9d'), '\x64' + '\x65' + '\x63' + chr(111) + '\x64' + '\x65')('\165' + chr(116) + chr(102) + chr(45) + chr(0b10000 + 0o50))): if not qX60lO1lgHA5((dYApxmRvGyhb in zSYIqIaCNRTS for dYApxmRvGyhb in roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'u\xf1a\xf2\xcc2m\xb1\x9a7\xa4'), '\x64' + chr(640 - 539) + '\143' + '\x6f' + chr(0b1100100) + chr(0b1100101))('\165' + chr(0b1110100) + chr(102) + chr(0b11 + 0o52) + chr(0b10101 + 0o43))))): continue vrFIgs0gCXQR = {zSYIqIaCNRTS[dYApxmRvGyhb]: cXXyzqlAJbZW.get_coefficient(dYApxmRvGyhb) for dYApxmRvGyhb in cXXyzqlAJbZW.reactants} mRqOpoPWPHxj = {zSYIqIaCNRTS[dYApxmRvGyhb]: cXXyzqlAJbZW.get_coefficient(dYApxmRvGyhb) for dYApxmRvGyhb in cXXyzqlAJbZW.mRqOpoPWPHxj} roI3spqORKae(uKYfp3Y7RwwL, roI3spqORKae(ES5oEprVxulp(b'P\xc0F\xa7\xd6:F\xb7\x84=\x82\xb8'), chr(0b1100100) + chr(0b1100101) + '\x63' + chr(6449 - 6338) + chr(2392 - 2292) + '\145')('\165' + chr(0b101110 + 0o106) + chr(102) + '\x2d' + '\070'))((cXXyzqlAJbZW, vrFIgs0gCXQR, mRqOpoPWPHxj)) whMg4joQbpQr = Bvi71nNyvlqO() I9sz1GWxe0jB = [] for ((Z2kNgFUpOEXr, NuJZTdWEwOMo, B4sVuMd4Eut_), (hzi3HgXTUwkf, nfd8jif28xl6, NdXRcsD8Xa9Z)) in u9j1YIgP0mZI(uKYfp3Y7RwwL, nzTpIcepk0o8(chr(1086 - 1038) + '\157' + chr(50), 0b1000)): if NuJZTdWEwOMo != nfd8jif28xl6: continue if B4sVuMd4Eut_ != NdXRcsD8Xa9Z: continue if roI3spqORKae(Z2kNgFUpOEXr, roI3spqORKae(ES5oEprVxulp(b'j\xf1c\xf6\xdc.h\xba\x87>\xbe\xf94'), chr(2628 - 2528) + chr(8170 - 8069) + chr(819 - 720) + chr(913 - 802) + chr(0b10101 + 0o117) + '\x65')(chr(117) + '\164' + '\x66' + '\055' + chr(0b111000))) != roI3spqORKae(hzi3HgXTUwkf, roI3spqORKae(ES5oEprVxulp(b'j\xf1c\xf6\xdc.h\xba\x87>\xbe\xf94'), chr(0b1010101 + 0o17) + chr(101) + '\x63' + chr(3109 - 2998) + chr(100) + chr(0b1100101))(chr(117) + chr(4670 - 4554) + chr(102) + chr(1505 - 1460) + chr(0b11 + 0o65))): continue roI3spqORKae(I9sz1GWxe0jB, roI3spqORKae(ES5oEprVxulp(b'P\xc0F\xa7\xd6:F\xb7\x84=\x82\xb8'), '\x64' + chr(101) + '\143' + chr(657 - 546) + '\x64' + chr(0b1010000 + 0o25))('\x75' + chr(2613 - 2497) + '\146' + '\055' + chr(0b111000)))((roI3spqORKae(Z2kNgFUpOEXr, roI3spqORKae(ES5oEprVxulp(b'u\xf5Y\xfd\xe2:9\x97\xdb(\x87\xd9'), chr(100) + '\145' + chr(0b100100 + 0o77) + chr(770 - 659) + '\144' + '\145')(chr(117) + chr(0b1010 + 0o152) + '\x66' + chr(45) + chr(0b111000))), roI3spqORKae(hzi3HgXTUwkf, roI3spqORKae(ES5oEprVxulp(b'u\xf5Y\xfd\xe2:9\x97\xdb(\x87\xd9'), chr(100) + '\x65' + '\143' + chr(111) + chr(0b1111 + 0o125) + chr(0b1100101))(chr(117) + chr(0b1110100) + chr(0b1011000 + 0o16) + chr(0b101101) + chr(56))))) roI3spqORKae(whMg4joQbpQr, roI3spqORKae(ES5oEprVxulp(b'm\xa7D\xf7\xc7.H\xa9\xaa4\x94\xe9'), '\144' + chr(10025 - 9924) + chr(0b111001 + 0o52) + chr(0b1011110 + 0o21) + chr(0b1001010 + 0o32) + '\x65')('\165' + chr(116) + chr(102) + chr(0b101101) + chr(0b111 + 0o61)))(roI3spqORKae(Z2kNgFUpOEXr, roI3spqORKae(ES5oEprVxulp(b'u\xf5Y\xfd\xe2:9\x97\xdb(\x87\xd9'), '\144' + chr(0b1100101) + '\143' + chr(7589 - 7478) + '\x64' + '\x65')(chr(117) + chr(1200 - 1084) + chr(0b1100110) + chr(0b10111 + 0o26) + chr(56)))) roI3spqORKae(whMg4joQbpQr, roI3spqORKae(ES5oEprVxulp(b'm\xa7D\xf7\xc7.H\xa9\xaa4\x94\xe9'), '\144' + '\145' + chr(9338 - 9239) + '\x6f' + '\x64' + chr(0b1000110 + 0o37))(chr(0b1110101) + '\164' + chr(102) + chr(1745 - 1700) + '\070'))(roI3spqORKae(hzi3HgXTUwkf, roI3spqORKae(ES5oEprVxulp(b'u\xf5Y\xfd\xe2:9\x97\xdb(\x87\xd9'), '\144' + chr(0b1100101) + chr(0b11001 + 0o112) + chr(111) + chr(0b1100100) + '\145')(chr(0b1000 + 0o155) + chr(0b1110100) + chr(102) + chr(1697 - 1652) + chr(0b111000)))) return (I9sz1GWxe0jB, ftfygxgFas5X(whMg4joQbpQr))
opencobra/memote
memote/support/basic.py
find_reactions_with_identical_genes
def find_reactions_with_identical_genes(model): """ Return reactions that have identical genes. Identify duplicate reactions globally by checking if any two reactions have the same genes. This can be useful to curate merged models or to clean-up bulk model modifications, but also to identify promiscuous enzymes. The heuristic compares reactions in a pairwise manner and reports on reaction pairs whose genes are identical. Reactions with missing genes are skipped. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- dict A mapping from sets of genes to all the reactions containing those genes. int The total number of unique reactions that appear duplicates based on their gene-protein-reaction associations. """ duplicates = dict() for rxn_a, rxn_b in combinations(model.reactions, 2): if not (rxn_a.genes and rxn_b.genes): continue if rxn_a.genes == rxn_b.genes: # This works because the `genes` are frozen sets. identifiers = rxn_a.genes duplicates.setdefault(identifiers, set()).update( [rxn_a.id, rxn_b.id]) # Transform the object for JSON compatibility num_duplicated = set() duplicated = {} for key in duplicates: # Object keys must be strings in JSON. new_key = ",".join(sorted(g.id for g in key)) duplicated[new_key] = rxns = list(duplicates[key]) num_duplicated.update(rxns) return duplicated, len(num_duplicated)
python
def find_reactions_with_identical_genes(model): """ Return reactions that have identical genes. Identify duplicate reactions globally by checking if any two reactions have the same genes. This can be useful to curate merged models or to clean-up bulk model modifications, but also to identify promiscuous enzymes. The heuristic compares reactions in a pairwise manner and reports on reaction pairs whose genes are identical. Reactions with missing genes are skipped. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- dict A mapping from sets of genes to all the reactions containing those genes. int The total number of unique reactions that appear duplicates based on their gene-protein-reaction associations. """ duplicates = dict() for rxn_a, rxn_b in combinations(model.reactions, 2): if not (rxn_a.genes and rxn_b.genes): continue if rxn_a.genes == rxn_b.genes: # This works because the `genes` are frozen sets. identifiers = rxn_a.genes duplicates.setdefault(identifiers, set()).update( [rxn_a.id, rxn_b.id]) # Transform the object for JSON compatibility num_duplicated = set() duplicated = {} for key in duplicates: # Object keys must be strings in JSON. new_key = ",".join(sorted(g.id for g in key)) duplicated[new_key] = rxns = list(duplicates[key]) num_duplicated.update(rxns) return duplicated, len(num_duplicated)
[ "def", "find_reactions_with_identical_genes", "(", "model", ")", ":", "duplicates", "=", "dict", "(", ")", "for", "rxn_a", ",", "rxn_b", "in", "combinations", "(", "model", ".", "reactions", ",", "2", ")", ":", "if", "not", "(", "rxn_a", ".", "genes", "and", "rxn_b", ".", "genes", ")", ":", "continue", "if", "rxn_a", ".", "genes", "==", "rxn_b", ".", "genes", ":", "# This works because the `genes` are frozen sets.", "identifiers", "=", "rxn_a", ".", "genes", "duplicates", ".", "setdefault", "(", "identifiers", ",", "set", "(", ")", ")", ".", "update", "(", "[", "rxn_a", ".", "id", ",", "rxn_b", ".", "id", "]", ")", "# Transform the object for JSON compatibility", "num_duplicated", "=", "set", "(", ")", "duplicated", "=", "{", "}", "for", "key", "in", "duplicates", ":", "# Object keys must be strings in JSON.", "new_key", "=", "\",\"", ".", "join", "(", "sorted", "(", "g", ".", "id", "for", "g", "in", "key", ")", ")", "duplicated", "[", "new_key", "]", "=", "rxns", "=", "list", "(", "duplicates", "[", "key", "]", ")", "num_duplicated", ".", "update", "(", "rxns", ")", "return", "duplicated", ",", "len", "(", "num_duplicated", ")" ]
Return reactions that have identical genes. Identify duplicate reactions globally by checking if any two reactions have the same genes. This can be useful to curate merged models or to clean-up bulk model modifications, but also to identify promiscuous enzymes. The heuristic compares reactions in a pairwise manner and reports on reaction pairs whose genes are identical. Reactions with missing genes are skipped. Parameters ---------- model : cobra.Model The metabolic model under investigation. Returns ------- dict A mapping from sets of genes to all the reactions containing those genes. int The total number of unique reactions that appear duplicates based on their gene-protein-reaction associations.
[ "Return", "reactions", "that", "have", "identical", "genes", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L482-L526
train
Find reactions that have identical genes.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b11010 + 0o26) + chr(111) + chr(0b11100 + 0o31) + chr(801 - 751), 0b1000), nzTpIcepk0o8(chr(0b11110 + 0o22) + chr(0b10 + 0o155) + '\062' + chr(51) + chr(0b110 + 0o54), ord("\x08")), nzTpIcepk0o8(chr(0b11011 + 0o25) + '\157' + '\061' + '\x30' + chr(0b110110), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(8058 - 7947) + chr(0b110010) + '\x32' + chr(55), 43055 - 43047), nzTpIcepk0o8('\060' + chr(144 - 33) + '\x31' + chr(0b10000 + 0o47) + '\x36', 53795 - 53787), nzTpIcepk0o8('\060' + chr(10099 - 9988) + chr(0b101100 + 0o7) + chr(0b11 + 0o61), ord("\x08")), nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(111) + chr(55) + chr(0b11 + 0o62), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(736 - 686) + '\x34', 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(49) + '\064' + chr(0b100110 + 0o20), 0o10), nzTpIcepk0o8(chr(1927 - 1879) + chr(2020 - 1909) + '\x33' + '\x30', 0b1000), nzTpIcepk0o8(chr(1919 - 1871) + chr(0b1101111) + chr(55) + '\060', 0o10), nzTpIcepk0o8('\060' + '\157' + '\063' + chr(85 - 36), ord("\x08")), nzTpIcepk0o8(chr(2259 - 2211) + '\157' + '\x31' + '\x34' + chr(0b110011), 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110011) + chr(943 - 889) + chr(51), 30042 - 30034), nzTpIcepk0o8(chr(0b1110 + 0o42) + '\x6f' + '\x31' + chr(0b11001 + 0o35) + '\067', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + '\063' + chr(0b110111) + chr(0b110010), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110001) + '\065' + chr(0b110110), 0o10), nzTpIcepk0o8('\060' + chr(2818 - 2707) + chr(0b101001 + 0o12) + chr(0b101101 + 0o12) + chr(55), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(50) + chr(0b110110) + chr(0b100010 + 0o17), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(50) + chr(0b110100) + chr(2781 - 2727), 0b1000), nzTpIcepk0o8(chr(685 - 637) + '\157' + chr(0b110010) + chr(0b10011 + 0o37) + '\x30', 0o10), nzTpIcepk0o8(chr(1923 - 1875) + '\x6f' + chr(49) + chr(0b100100 + 0o17) + '\060', 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b11111 + 0o22) + chr(322 - 273) + chr(53), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b10011 + 0o40) + chr(821 - 773) + chr(49), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(0b110011) + '\066' + '\065', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b101101 + 0o6) + chr(0b110111) + chr(0b1111 + 0o47), 0o10), nzTpIcepk0o8(chr(1137 - 1089) + '\x6f' + chr(2169 - 2120) + '\x33' + chr(0b110110), 0b1000), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(0b1101111) + chr(51) + chr(54 - 5) + chr(196 - 148), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(3984 - 3873) + chr(1202 - 1152) + chr(0b1001 + 0o47) + '\x31', 34544 - 34536), nzTpIcepk0o8(chr(203 - 155) + chr(111) + '\063' + chr(0b100011 + 0o21) + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(1516 - 1465) + '\060', 8), nzTpIcepk0o8(chr(48) + chr(0b110111 + 0o70) + '\062' + chr(0b11000 + 0o32) + chr(52), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + '\x33' + '\x34', 8), nzTpIcepk0o8('\060' + chr(111) + chr(0b110011) + chr(881 - 831) + chr(0b111 + 0o54), 31942 - 31934), nzTpIcepk0o8('\x30' + chr(0b1010011 + 0o34) + chr(956 - 906) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(1129 - 1081) + chr(0b1101111) + '\061', 9352 - 9344), nzTpIcepk0o8(chr(48) + chr(5105 - 4994) + '\x34' + chr(52), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b110101 + 0o72) + chr(0b110011) + '\064' + chr(55), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x33' + chr(51), 53743 - 53735), nzTpIcepk0o8(chr(2136 - 2088) + chr(111) + '\061' + '\064' + '\065', 32101 - 32093)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + '\x6f' + '\065' + chr(48), 3229 - 3221)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x04'), '\x64' + chr(2433 - 2332) + chr(0b1001110 + 0o25) + chr(0b1101111) + chr(9255 - 9155) + '\x65')(chr(0b100 + 0o161) + chr(3850 - 3734) + '\x66' + chr(713 - 668) + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def LzfcKogc9zVo(KW0sEfjlgNpM): I9sz1GWxe0jB = znjnJWK64FDT() for (Z2kNgFUpOEXr, hzi3HgXTUwkf) in u9j1YIgP0mZI(roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b"X\xff'\xf4\nuRz\x15"), chr(0b1100100) + chr(0b1100101) + chr(1997 - 1898) + chr(111) + '\x64' + chr(0b1100101))(chr(0b110001 + 0o104) + chr(9416 - 9300) + chr(102) + '\055' + chr(0b110110 + 0o2))), nzTpIcepk0o8(chr(0b10 + 0o56) + '\x6f' + '\062', ord("\x08"))): if not (roI3spqORKae(Z2kNgFUpOEXr, roI3spqORKae(ES5oEprVxulp(b'I\xa9%\xe0!CryV+|X'), chr(0b100011 + 0o101) + chr(893 - 792) + '\143' + chr(111) + '\144' + chr(0b101 + 0o140))(chr(1839 - 1722) + chr(0b110110 + 0o76) + '\146' + chr(819 - 774) + chr(56))) and roI3spqORKae(hzi3HgXTUwkf, roI3spqORKae(ES5oEprVxulp(b'I\xa9%\xe0!CryV+|X'), '\144' + '\x65' + '\143' + '\157' + chr(9596 - 9496) + '\x65')(chr(918 - 801) + chr(0b11111 + 0o125) + chr(102) + chr(1931 - 1886) + '\x38'))): continue if roI3spqORKae(Z2kNgFUpOEXr, roI3spqORKae(ES5oEprVxulp(b'I\xa9%\xe0!CryV+|X'), chr(0b1010101 + 0o17) + chr(292 - 191) + chr(3974 - 3875) + '\157' + chr(3192 - 3092) + '\x65')('\165' + '\164' + chr(0b1000001 + 0o45) + chr(1085 - 1040) + '\x38')) == roI3spqORKae(hzi3HgXTUwkf, roI3spqORKae(ES5oEprVxulp(b'I\xa9%\xe0!CryV+|X'), '\144' + chr(101) + chr(0b1100011) + chr(0b1101111) + chr(100) + '\145')(chr(0b1110101) + '\164' + '\146' + chr(45) + chr(0b111000))): YmjRMB5k694o = Z2kNgFUpOEXr.c3cw__Om03DA roI3spqORKae(I9sz1GWxe0jB.setdefault(YmjRMB5k694o, Bvi71nNyvlqO()), roI3spqORKae(ES5oEprVxulp(b'`\xc5-\xa57E\x7f%\x05}Iw'), chr(7516 - 7416) + chr(0b100001 + 0o104) + chr(0b1001011 + 0o30) + chr(0b1101111) + chr(9691 - 9591) + chr(0b1100101))(chr(0b1110101) + chr(0b1001000 + 0o54) + chr(0b1001101 + 0o31) + '\055' + '\x38'))([roI3spqORKae(Z2kNgFUpOEXr, roI3spqORKae(ES5oEprVxulp(b'G\xfb\n\xf92{\x05[SbhM'), chr(6567 - 6467) + chr(0b1000000 + 0o45) + chr(0b1100011) + '\157' + chr(0b1011010 + 0o12) + chr(0b11110 + 0o107))(chr(117) + chr(0b1110100) + chr(102) + '\055' + chr(0b11011 + 0o35))), roI3spqORKae(hzi3HgXTUwkf, roI3spqORKae(ES5oEprVxulp(b'G\xfb\n\xf92{\x05[SbhM'), chr(0b101011 + 0o71) + '\x65' + chr(5815 - 5716) + chr(6002 - 5891) + chr(100) + chr(2768 - 2667))(chr(117) + chr(0b1110100) + '\x66' + chr(45) + chr(56)))]) whMg4joQbpQr = Bvi71nNyvlqO() dUhYQ1m6A9Z6 = {} for QYodcsDtoGq7 in I9sz1GWxe0jB: VzXAKXWSgBLn = roI3spqORKae(ES5oEprVxulp(b'\x06'), '\144' + chr(101) + '\143' + chr(111) + '\144' + '\x65')(chr(0b1110101) + chr(4347 - 4231) + chr(2463 - 2361) + chr(0b101101) + '\x38').Y4yM9BcfTCNq(V3OlOVg98A85((KQq7Z9J63zv1.maLnLg8O5zPT for KQq7Z9J63zv1 in QYodcsDtoGq7))) dUhYQ1m6A9Z6[VzXAKXWSgBLn] = im1gnkmv3KCd = H4NoA26ON7iG(I9sz1GWxe0jB[QYodcsDtoGq7]) roI3spqORKae(whMg4joQbpQr, roI3spqORKae(ES5oEprVxulp(b'`\xc5-\xa57E\x7f%\x05}Iw'), chr(0b100001 + 0o103) + chr(1069 - 968) + chr(0b1100011) + '\x6f' + chr(0b1100100) + '\x65')(chr(0b11100 + 0o131) + '\x74' + chr(0b1100110) + chr(1747 - 1702) + chr(0b111 + 0o61)))(im1gnkmv3KCd) return (dUhYQ1m6A9Z6, ftfygxgFas5X(whMg4joQbpQr))
opencobra/memote
memote/support/basic.py
find_medium_metabolites
def find_medium_metabolites(model): """Return the list of metabolites ingested/excreted by the model.""" return [met.id for rxn in model.medium for met in model.reactions.get_by_id(rxn).metabolites]
python
def find_medium_metabolites(model): """Return the list of metabolites ingested/excreted by the model.""" return [met.id for rxn in model.medium for met in model.reactions.get_by_id(rxn).metabolites]
[ "def", "find_medium_metabolites", "(", "model", ")", ":", "return", "[", "met", ".", "id", "for", "rxn", "in", "model", ".", "medium", "for", "met", "in", "model", ".", "reactions", ".", "get_by_id", "(", "rxn", ")", ".", "metabolites", "]" ]
Return the list of metabolites ingested/excreted by the model.
[ "Return", "the", "list", "of", "metabolites", "ingested", "/", "excreted", "by", "the", "model", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L535-L538
train
Return the list of metabolites ingested by the model.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + '\157' + chr(0b110010) + '\x36', 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(0b100001 + 0o26) + '\060', 35708 - 35700), nzTpIcepk0o8('\060' + chr(111) + chr(49) + '\x33' + '\x36', 0o10), nzTpIcepk0o8('\060' + chr(8891 - 8780) + '\067' + chr(0b110010), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110100) + chr(51), 30416 - 30408), nzTpIcepk0o8(chr(594 - 546) + chr(0b1101111) + '\062' + chr(54) + '\x36', ord("\x08")), nzTpIcepk0o8('\x30' + chr(7293 - 7182) + chr(49) + chr(51) + '\062', 15973 - 15965), nzTpIcepk0o8(chr(48) + chr(11359 - 11248) + chr(0b100 + 0o56) + chr(50) + chr(49), 22644 - 22636), nzTpIcepk0o8(chr(48) + chr(922 - 811) + chr(50) + chr(0b1111 + 0o43) + chr(0b101011 + 0o5), 21041 - 21033), nzTpIcepk0o8('\x30' + chr(0b101110 + 0o101) + '\x33' + '\060' + chr(930 - 876), 15032 - 15024), nzTpIcepk0o8(chr(293 - 245) + chr(111) + chr(0b110001) + chr(0b1100 + 0o52) + '\x30', ord("\x08")), nzTpIcepk0o8(chr(1271 - 1223) + '\157' + chr(0b110010) + chr(0b110001) + chr(0b110101), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(8898 - 8787) + chr(0b110111) + chr(0b1110 + 0o44), 8), nzTpIcepk0o8(chr(1273 - 1225) + chr(0b111101 + 0o62) + '\x31' + chr(53) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(894 - 846) + chr(0b1101111) + chr(0b110001) + chr(1286 - 1233) + '\x36', ord("\x08")), nzTpIcepk0o8(chr(756 - 708) + chr(111) + '\x32' + chr(0b110110) + chr(0b110110), 8), nzTpIcepk0o8('\060' + chr(0b0 + 0o157) + '\063' + '\x30' + chr(54), 8), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(0b1101111) + chr(158 - 109) + chr(264 - 214) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(175 - 127) + '\x6f' + '\x32' + chr(49) + chr(2201 - 2151), 19261 - 19253), nzTpIcepk0o8('\060' + chr(111) + chr(1976 - 1925) + '\063' + chr(0b1101 + 0o50), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(51) + chr(0b110010) + chr(53), ord("\x08")), nzTpIcepk0o8('\060' + chr(10138 - 10027) + '\x31' + chr(54) + chr(51), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(49) + '\x34', 0b1000), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(255 - 144) + chr(0b1001 + 0o50) + '\067' + chr(0b110100), 0o10), nzTpIcepk0o8('\x30' + chr(10860 - 10749) + chr(0b110010) + chr(0b110001) + chr(0b110110), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(3106 - 2995) + chr(50) + '\067', ord("\x08")), nzTpIcepk0o8('\060' + chr(10849 - 10738) + chr(0b110011) + '\x34' + chr(51), 0o10), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110011) + chr(0b100010 + 0o17) + chr(0b110110), 55312 - 55304), nzTpIcepk0o8(chr(0b101010 + 0o6) + chr(10450 - 10339) + chr(0b110011) + '\x36' + chr(0b100000 + 0o27), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001) + '\062' + chr(50), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x31' + chr(0b10000 + 0o40) + '\x34', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x33' + chr(0b101110 + 0o5), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(2325 - 2275) + '\x30' + chr(0b110110), 0b1000), nzTpIcepk0o8(chr(2200 - 2152) + chr(111) + '\x34' + chr(0b10 + 0o64), 22299 - 22291), nzTpIcepk0o8('\060' + '\157' + '\x33' + chr(0b110000) + chr(2436 - 2385), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b10000 + 0o43) + chr(0b110101) + chr(49), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(2045 - 1934) + '\061' + '\063' + '\060', 36810 - 36802), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110001 + 0o0) + '\x32' + chr(51), 8), nzTpIcepk0o8(chr(1086 - 1038) + '\157' + '\x31' + '\060' + chr(49), ord("\x08")), nzTpIcepk0o8(chr(1264 - 1216) + chr(6089 - 5978) + chr(0b110010) + chr(0b10011 + 0o42) + chr(0b110000), 13876 - 13868)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b101 + 0o53) + '\157' + chr(533 - 480) + chr(1400 - 1352), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'8'), '\x64' + chr(0b1100101) + chr(0b1100011) + chr(0b1101111) + '\144' + chr(101))('\165' + chr(0b1110100) + chr(0b1100110) + '\x2d' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Z057VYytlJtl(KW0sEfjlgNpM): return [roI3spqORKae(dYApxmRvGyhb, roI3spqORKae(ES5oEprVxulp(b'{Y\x12To\xd1b\xde\xa5\xbc \xd9'), chr(0b1000001 + 0o43) + chr(0b1000110 + 0o37) + '\x63' + '\157' + chr(0b10101 + 0o117) + '\x65')(chr(117) + '\x74' + chr(4187 - 4085) + '\055' + chr(0b111000))) for cXXyzqlAJbZW in roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'Ds,x`\xe27\xf4\xa8\xf23\xc8'), chr(0b1011000 + 0o14) + '\x65' + chr(99) + chr(4676 - 4565) + chr(0b1100100) + '\x65')(chr(0b1110101) + '\x74' + chr(0b1100110) + chr(0b101011 + 0o2) + '\x38')) for dYApxmRvGyhb in roI3spqORKae(KW0sEfjlgNpM.reactions.get_by_id(cXXyzqlAJbZW), roI3spqORKae(ES5oEprVxulp(b'{]*[A\xd96\xf8\xe4\xa3\x03'), chr(0b1100100) + '\x65' + chr(0b1001111 + 0o24) + chr(0b11101 + 0o122) + chr(0b1100100) + chr(1485 - 1384))(chr(117) + '\164' + '\146' + '\x2d' + chr(3084 - 3028)))]
opencobra/memote
memote/support/basic.py
find_external_metabolites
def find_external_metabolites(model): """Return all metabolites in the external compartment.""" ex_comp = find_external_compartment(model) return [met for met in model.metabolites if met.compartment == ex_comp]
python
def find_external_metabolites(model): """Return all metabolites in the external compartment.""" ex_comp = find_external_compartment(model) return [met for met in model.metabolites if met.compartment == ex_comp]
[ "def", "find_external_metabolites", "(", "model", ")", ":", "ex_comp", "=", "find_external_compartment", "(", "model", ")", "return", "[", "met", "for", "met", "in", "model", ".", "metabolites", "if", "met", ".", "compartment", "==", "ex_comp", "]" ]
Return all metabolites in the external compartment.
[ "Return", "all", "metabolites", "in", "the", "external", "compartment", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/basic.py#L541-L544
train
Return all metabolites in the external compartment.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(3018 - 2907) + '\063' + '\x30' + chr(0b11100 + 0o26), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110110) + '\x30', ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(417 - 365) + '\x36', 31806 - 31798), nzTpIcepk0o8(chr(475 - 427) + chr(8858 - 8747) + chr(1771 - 1720) + '\064' + chr(0b100001 + 0o23), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\062' + '\x35' + chr(2006 - 1952), 0o10), nzTpIcepk0o8(chr(0b110000 + 0o0) + chr(0b11110 + 0o121) + '\x32' + chr(0b10000 + 0o41) + chr(0b110001), 16122 - 16114), nzTpIcepk0o8('\060' + '\157' + chr(50) + chr(0b110000) + '\060', 0b1000), nzTpIcepk0o8('\x30' + chr(111) + '\062' + chr(0b110100) + chr(53), 10344 - 10336), nzTpIcepk0o8(chr(0b11110 + 0o22) + '\157' + chr(0b110010) + chr(51) + chr(0b110100), 0b1000), nzTpIcepk0o8('\x30' + chr(9523 - 9412) + '\063' + chr(54) + chr(2651 - 2596), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001) + chr(0b100010 + 0o25) + chr(52), 59226 - 59218), nzTpIcepk0o8(chr(0b110000) + chr(5804 - 5693) + chr(0b110011) + chr(0b110010) + chr(48), 12506 - 12498), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(1176 - 1124) + chr(55), 0o10), nzTpIcepk0o8('\x30' + chr(0b1100111 + 0o10) + '\x31' + chr(0b110000 + 0o4) + chr(0b110111), 48531 - 48523), nzTpIcepk0o8('\060' + chr(111) + chr(0b110011) + '\065' + chr(49), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(283 - 234) + '\x36' + chr(0b110100 + 0o3), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b110100) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(0b100000 + 0o20) + chr(0b1010111 + 0o30) + chr(54), 56052 - 56044), nzTpIcepk0o8('\x30' + chr(111) + chr(0b10101 + 0o35) + '\063' + chr(0b110001), 48931 - 48923), nzTpIcepk0o8(chr(1080 - 1032) + chr(6556 - 6445) + chr(1861 - 1810) + '\067' + '\064', 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b100010 + 0o20) + '\x30' + chr(771 - 719), 0o10), nzTpIcepk0o8(chr(0b10111 + 0o31) + '\x6f' + chr(49) + '\x33' + chr(2242 - 2189), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1111 + 0o140) + '\062' + chr(0b11111 + 0o24) + chr(0b10100 + 0o37), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\x32' + chr(2212 - 2161) + chr(0b110000), 0b1000), nzTpIcepk0o8(chr(48) + chr(8099 - 7988) + chr(0b110010 + 0o2) + chr(0b1001 + 0o54), 0o10), nzTpIcepk0o8(chr(48) + chr(4970 - 4859) + chr(0b110010) + chr(53) + chr(48), 63206 - 63198), nzTpIcepk0o8(chr(315 - 267) + chr(0b110101 + 0o72) + chr(2244 - 2195) + chr(166 - 118) + chr(54), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110001) + chr(0b110101) + '\x34', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110001) + '\x31' + '\x36', 46090 - 46082), nzTpIcepk0o8(chr(48) + '\x6f' + '\x31' + chr(0b101100 + 0o4) + chr(0b110 + 0o53), ord("\x08")), nzTpIcepk0o8(chr(0b101010 + 0o6) + chr(9709 - 9598) + chr(50) + chr(79 - 30) + '\067', 64079 - 64071), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(63 - 8) + chr(0b110000), 49036 - 49028), nzTpIcepk0o8(chr(0b100010 + 0o16) + '\157' + '\x33' + chr(55) + '\x36', 0o10), nzTpIcepk0o8(chr(723 - 675) + chr(12203 - 12092) + chr(0b101000 + 0o12) + '\x35' + chr(1309 - 1260), 0o10), nzTpIcepk0o8(chr(1535 - 1487) + chr(111) + chr(783 - 732) + '\x35' + chr(1422 - 1369), ord("\x08")), nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(111) + '\067' + chr(0b101001 + 0o7), 8), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110000 + 0o3) + chr(0b110100) + chr(0b110111), 8170 - 8162), nzTpIcepk0o8(chr(0b100010 + 0o16) + chr(8249 - 8138) + chr(49) + chr(52) + chr(53), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b100011 + 0o20) + chr(0b1100 + 0o51) + '\x32', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(350 - 301) + chr(55) + chr(0b110111), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(11050 - 10939) + chr(2716 - 2663) + chr(0b100111 + 0o11), ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xec'), '\144' + chr(5244 - 5143) + chr(6918 - 6819) + '\x6f' + '\144' + '\145')(chr(0b1110101) + '\x74' + '\146' + chr(1245 - 1200) + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def ef2b2xhw5Lp7(KW0sEfjlgNpM): yBh4QT5Noi2i = IrxhP5ARt4xR(KW0sEfjlgNpM) return [dYApxmRvGyhb for dYApxmRvGyhb in roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xafUR\x85\xcc\xe6\xec\xcc\xe8\x92\x0f'), '\x64' + chr(101) + chr(0b111100 + 0o47) + chr(2156 - 2045) + chr(0b1100100) + '\x65')(chr(11169 - 11052) + '\x74' + chr(7852 - 7750) + chr(473 - 428) + chr(0b10001 + 0o47))) if roI3spqORKae(dYApxmRvGyhb, roI3spqORKae(ES5oEprVxulp(b'\x95f\x11\x91\xca\xf9\xf0\xf0\xea\xc7\n\x9d'), '\144' + chr(0b1100101) + '\x63' + chr(111) + chr(0b1010010 + 0o22) + chr(0b1100101))('\165' + chr(116) + chr(102) + '\055' + '\070')) == yBh4QT5Noi2i]
opencobra/memote
memote/suite/results/result_manager.py
ResultManager.store
def store(self, result, filename, pretty=True): """ Write a result to the given file. Parameters ---------- result : memote.MemoteResult The dictionary structure of results. filename : str or pathlib.Path Store results directly to the given filename. pretty : bool, optional Whether (default) or not to write JSON in a more legible format. """ LOGGER.info("Storing result in '%s'.", filename) if filename.endswith(".gz"): with gzip.open(filename, "wb") as file_handle: file_handle.write( jsonify(result, pretty=pretty).encode("utf-8") ) else: with open(filename, "w", encoding="utf-8") as file_handle: file_handle.write(jsonify(result, pretty=pretty))
python
def store(self, result, filename, pretty=True): """ Write a result to the given file. Parameters ---------- result : memote.MemoteResult The dictionary structure of results. filename : str or pathlib.Path Store results directly to the given filename. pretty : bool, optional Whether (default) or not to write JSON in a more legible format. """ LOGGER.info("Storing result in '%s'.", filename) if filename.endswith(".gz"): with gzip.open(filename, "wb") as file_handle: file_handle.write( jsonify(result, pretty=pretty).encode("utf-8") ) else: with open(filename, "w", encoding="utf-8") as file_handle: file_handle.write(jsonify(result, pretty=pretty))
[ "def", "store", "(", "self", ",", "result", ",", "filename", ",", "pretty", "=", "True", ")", ":", "LOGGER", ".", "info", "(", "\"Storing result in '%s'.\"", ",", "filename", ")", "if", "filename", ".", "endswith", "(", "\".gz\"", ")", ":", "with", "gzip", ".", "open", "(", "filename", ",", "\"wb\"", ")", "as", "file_handle", ":", "file_handle", ".", "write", "(", "jsonify", "(", "result", ",", "pretty", "=", "pretty", ")", ".", "encode", "(", "\"utf-8\"", ")", ")", "else", ":", "with", "open", "(", "filename", ",", "\"w\"", ",", "encoding", "=", "\"utf-8\"", ")", "as", "file_handle", ":", "file_handle", ".", "write", "(", "jsonify", "(", "result", ",", "pretty", "=", "pretty", ")", ")" ]
Write a result to the given file. Parameters ---------- result : memote.MemoteResult The dictionary structure of results. filename : str or pathlib.Path Store results directly to the given filename. pretty : bool, optional Whether (default) or not to write JSON in a more legible format.
[ "Write", "a", "result", "to", "the", "given", "file", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/results/result_manager.py#L42-L64
train
Store a result in the given file.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(2007 - 1959) + '\x6f' + '\x31' + '\062' + chr(843 - 795), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(5717 - 5606) + chr(672 - 621) + '\x35' + chr(111 - 62), 0b1000), nzTpIcepk0o8(chr(0b11100 + 0o24) + chr(9303 - 9192) + chr(77 - 26) + chr(0b1001 + 0o54) + '\060', 0b1000), nzTpIcepk0o8('\060' + chr(0b110101 + 0o72) + chr(53) + '\062', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x31' + '\064' + '\x34', 0o10), nzTpIcepk0o8('\060' + chr(0b110101 + 0o72) + '\063' + chr(55) + chr(0b110010), 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(0b1000 + 0o52) + chr(0b110000) + chr(54), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\x31' + chr(0b101010 + 0o14) + chr(0b10111 + 0o34), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110010) + chr(54) + chr(0b101011 + 0o10), ord("\x08")), nzTpIcepk0o8(chr(1939 - 1891) + chr(6266 - 6155) + '\x32' + chr(484 - 433) + chr(1732 - 1684), 24613 - 24605), nzTpIcepk0o8('\060' + chr(111) + chr(0b101101 + 0o5) + chr(0b110111) + chr(0b1111 + 0o43), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(50) + chr(0b10010 + 0o36) + chr(728 - 676), 0o10), nzTpIcepk0o8(chr(48) + chr(5818 - 5707) + chr(1916 - 1867) + chr(50) + '\063', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b111010 + 0o65) + chr(577 - 527) + chr(0b110 + 0o53) + chr(0b101110 + 0o5), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110010) + '\x31' + chr(1723 - 1672), 8), nzTpIcepk0o8('\x30' + '\x6f' + chr(2598 - 2546) + '\065', 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(95 - 46) + chr(0b101010 + 0o12) + chr(0b110 + 0o56), 8), nzTpIcepk0o8(chr(2297 - 2249) + '\x6f' + chr(0b110011) + '\x32' + chr(0b101 + 0o56), 2212 - 2204), nzTpIcepk0o8(chr(48) + chr(111) + chr(50) + '\060', 42870 - 42862), nzTpIcepk0o8(chr(0b1011 + 0o45) + chr(111) + chr(51) + '\x36' + chr(0b100000 + 0o21), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110010) + chr(52) + chr(985 - 933), 893 - 885), nzTpIcepk0o8(chr(54 - 6) + chr(11840 - 11729) + '\063' + chr(52) + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(50) + chr(48) + chr(52), 8), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b10101 + 0o34) + '\061', 8690 - 8682), nzTpIcepk0o8('\060' + '\157' + chr(0b110001 + 0o6), 0b1000), nzTpIcepk0o8('\x30' + chr(9387 - 9276) + chr(0b110010) + chr(0b110000) + chr(0b11111 + 0o27), 8), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b101111 + 0o2) + chr(53) + '\060', 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110001) + chr(0b110011) + '\x35', 60232 - 60224), nzTpIcepk0o8('\x30' + '\x6f' + chr(1629 - 1580) + chr(1581 - 1528) + chr(0b110111), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b101101 + 0o4) + chr(0b110100) + chr(0b110101), 0o10), nzTpIcepk0o8(chr(1656 - 1608) + '\157' + chr(0b101111 + 0o2) + chr(1367 - 1317) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(51) + chr(0b1100 + 0o44) + chr(0b110000), 0o10), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b11111 + 0o22) + '\x33' + chr(0b100011 + 0o22), 8), nzTpIcepk0o8(chr(0b11 + 0o55) + chr(111) + '\x31' + chr(1526 - 1477) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b10101 + 0o33) + chr(111) + chr(0b100011 + 0o20) + '\066', 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(1268 - 1219) + chr(1687 - 1639), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(49) + '\x37' + chr(1827 - 1779), 0b1000), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(0b1101111) + chr(1855 - 1806) + chr(0b110100) + '\x36', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(11789 - 11678) + chr(0b1 + 0o60) + chr(49) + chr(0b100011 + 0o17), 0b1000), nzTpIcepk0o8(chr(0b11110 + 0o22) + '\157' + chr(52) + chr(0b10111 + 0o32), 4906 - 4898)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + chr(111) + chr(209 - 156) + chr(48), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'~'), chr(0b1100100) + chr(0b1000110 + 0o37) + '\x63' + '\x6f' + chr(3585 - 3485) + chr(0b100110 + 0o77))(chr(0b1000010 + 0o63) + '\x74' + '\146' + '\055' + chr(1872 - 1816)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Yws2kZcdmcdB(hXMPsSrOQzbh, POx95m7SPOVy, FxZHtXEolYsL, bQgFVZh4cKad=nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110001), 0o10)): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'9\x91\xa6R]\xb6\xf1,\x82\xff\xc8\xcb'), '\144' + chr(101) + chr(0b1100011) + chr(111) + chr(0b111110 + 0o46) + '\x65')(chr(117) + '\164' + chr(102) + '\x2d' + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'\x03\x9d\x87X\r\x94\xe1S\xc1\xfd\xc9\xf1?\xff\xabL\n\xf37\xd4\xd7\xc1\xaa'), '\144' + chr(101) + chr(1998 - 1899) + chr(0b110 + 0o151) + chr(100) + chr(1546 - 1445))(chr(117) + chr(116) + chr(102) + chr(45) + chr(0b111000)), FxZHtXEolYsL) if roI3spqORKae(FxZHtXEolYsL, roI3spqORKae(ES5oEprVxulp(b'\x19\xd0\x8ea-\xb9\xc7?\xd2\xed\xf0\xf6'), chr(0b11101 + 0o107) + chr(101) + chr(99) + chr(0b1011011 + 0o24) + chr(4404 - 4304) + chr(4074 - 3973))('\x75' + '\x74' + chr(0b101111 + 0o67) + chr(839 - 794) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'~\x8e\x92'), chr(0b1100100) + '\x65' + chr(0b1001100 + 0o27) + '\x6f' + chr(238 - 138) + chr(0b1001000 + 0o35))(chr(117) + chr(3800 - 3684) + chr(0b1100110) + '\055' + '\070')): with roI3spqORKae(xx_WP37oeyA3, roI3spqORKae(ES5oEprVxulp(b'\x14\x87\xbd\x196\x8b\xbf=\x86\xf9\xd6\xe5'), '\144' + chr(0b100000 + 0o105) + chr(0b111000 + 0o53) + chr(0b110100 + 0o73) + chr(0b1100100) + '\145')('\165' + chr(0b1110100) + '\x66' + chr(0b1011 + 0o42) + chr(999 - 943)))(FxZHtXEolYsL, roI3spqORKae(ES5oEprVxulp(b"'\x8b"), '\144' + chr(0b1100101) + '\143' + chr(0b1101111) + chr(0b101001 + 0o73) + chr(0b1100000 + 0o5))(chr(0b1110101) + '\x74' + '\x66' + '\x2d' + '\070')) as rC115QJVCRma: roI3spqORKae(rC115QJVCRma, roI3spqORKae(ES5oEprVxulp(b'=\x85\xd8B\x0c\x8a\xf0B\xff\xe8\xcb\xb6'), '\144' + '\145' + '\x63' + chr(0b1101111) + chr(0b110110 + 0o56) + '\145')('\165' + chr(9418 - 9302) + '\x66' + chr(0b100110 + 0o7) + chr(336 - 280)))(roI3spqORKae(KX6AkKujYHMO(POx95m7SPOVy, pretty=bQgFVZh4cKad), roI3spqORKae(ES5oEprVxulp(b'\t\x98\xa1K6\xbc\xe0\x16\xdc\xac\xf2\xe5'), chr(0b1000100 + 0o40) + '\x65' + chr(0b1011010 + 0o11) + chr(0b1101111) + chr(0b1110 + 0o126) + chr(101))(chr(397 - 280) + '\x74' + chr(0b11010 + 0o114) + chr(1563 - 1518) + '\070'))(roI3spqORKae(ES5oEprVxulp(b'%\x9d\x8e\x07\\'), chr(5066 - 4966) + chr(0b1100101) + chr(2932 - 2833) + '\157' + chr(6663 - 6563) + '\x65')(chr(0b101010 + 0o113) + chr(8463 - 8347) + '\146' + chr(45) + chr(0b1 + 0o67)))) else: with DnU3Rq9N5ala(FxZHtXEolYsL, roI3spqORKae(ES5oEprVxulp(b"'"), chr(0b1100100) + '\145' + '\143' + '\157' + chr(0b1100100) + chr(0b111011 + 0o52))(chr(117) + chr(0b1100000 + 0o24) + chr(102) + '\055' + chr(2842 - 2786)), encoding=roI3spqORKae(ES5oEprVxulp(b'%\x9d\x8e\x07\\'), chr(100) + '\x65' + chr(0b1100011) + chr(3311 - 3200) + chr(5261 - 5161) + '\x65')(chr(117) + chr(0b11001 + 0o133) + chr(2641 - 2539) + chr(714 - 669) + chr(801 - 745))) as rC115QJVCRma: roI3spqORKae(rC115QJVCRma, roI3spqORKae(ES5oEprVxulp(b'=\x85\xd8B\x0c\x8a\xf0B\xff\xe8\xcb\xb6'), '\x64' + chr(0b1011100 + 0o11) + '\143' + chr(0b100 + 0o153) + chr(0b1100100) + '\x65')(chr(12078 - 11961) + chr(116) + chr(604 - 502) + chr(0b101101) + chr(56)))(KX6AkKujYHMO(POx95m7SPOVy, pretty=bQgFVZh4cKad))
opencobra/memote
memote/suite/results/result_manager.py
ResultManager.load
def load(self, filename): """Load a result from the given JSON file.""" LOGGER.info("Loading result from '%s'.", filename) if filename.endswith(".gz"): with gzip.open(filename, "rb") as file_handle: result = MemoteResult( json.loads(file_handle.read().decode("utf-8")) ) else: with open(filename, "r", encoding="utf-8") as file_handle: result = MemoteResult(json.load(file_handle)) # TODO (Moritz Beber): Validate the read-in JSON maybe? Trade-off # between extra time taken and correctness. Maybe we re-visit this # issue when there was a new JSON format version needed. return result
python
def load(self, filename): """Load a result from the given JSON file.""" LOGGER.info("Loading result from '%s'.", filename) if filename.endswith(".gz"): with gzip.open(filename, "rb") as file_handle: result = MemoteResult( json.loads(file_handle.read().decode("utf-8")) ) else: with open(filename, "r", encoding="utf-8") as file_handle: result = MemoteResult(json.load(file_handle)) # TODO (Moritz Beber): Validate the read-in JSON maybe? Trade-off # between extra time taken and correctness. Maybe we re-visit this # issue when there was a new JSON format version needed. return result
[ "def", "load", "(", "self", ",", "filename", ")", ":", "LOGGER", ".", "info", "(", "\"Loading result from '%s'.\"", ",", "filename", ")", "if", "filename", ".", "endswith", "(", "\".gz\"", ")", ":", "with", "gzip", ".", "open", "(", "filename", ",", "\"rb\"", ")", "as", "file_handle", ":", "result", "=", "MemoteResult", "(", "json", ".", "loads", "(", "file_handle", ".", "read", "(", ")", ".", "decode", "(", "\"utf-8\"", ")", ")", ")", "else", ":", "with", "open", "(", "filename", ",", "\"r\"", ",", "encoding", "=", "\"utf-8\"", ")", "as", "file_handle", ":", "result", "=", "MemoteResult", "(", "json", ".", "load", "(", "file_handle", ")", ")", "# TODO (Moritz Beber): Validate the read-in JSON maybe? Trade-off", "# between extra time taken and correctness. Maybe we re-visit this", "# issue when there was a new JSON format version needed.", "return", "result" ]
Load a result from the given JSON file.
[ "Load", "a", "result", "from", "the", "given", "JSON", "file", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/results/result_manager.py#L66-L80
train
Load a result from the given JSON file.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(11971 - 11860) + '\062' + chr(0b101001 + 0o12) + chr(1030 - 978), 0o10), nzTpIcepk0o8('\x30' + '\157' + '\x31' + '\063', 0o10), nzTpIcepk0o8(chr(48) + chr(0b110 + 0o151) + chr(0b100000 + 0o23) + chr(2805 - 2751) + chr(50), 0o10), nzTpIcepk0o8('\060' + chr(0b1 + 0o156) + chr(0b110011) + '\065' + '\062', ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + '\062' + chr(0b101000 + 0o10) + chr(49), 0b1000), nzTpIcepk0o8(chr(0b101001 + 0o7) + chr(0b11000 + 0o127) + '\x37' + chr(0b110010), 22470 - 22462), nzTpIcepk0o8(chr(1382 - 1334) + chr(0b100111 + 0o110) + chr(1085 - 1034) + '\061' + chr(1128 - 1078), 0o10), nzTpIcepk0o8('\060' + chr(0b1011000 + 0o27) + chr(51) + '\x37' + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x31' + chr(0b100010 + 0o21) + '\x34', 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110010) + '\067' + chr(563 - 512), 16417 - 16409), nzTpIcepk0o8(chr(48) + chr(111) + '\065' + chr(49), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + '\061' + chr(0b110000 + 0o0), 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\x33' + chr(49) + '\065', ord("\x08")), nzTpIcepk0o8(chr(221 - 173) + chr(3978 - 3867) + '\x32' + chr(0b11 + 0o61) + '\x32', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b10001 + 0o43) + chr(211 - 160), 0o10), nzTpIcepk0o8(chr(0b100100 + 0o14) + chr(0b1101111) + '\x33' + '\x33' + chr(0b11 + 0o64), 0b1000), nzTpIcepk0o8(chr(0b10000 + 0o40) + chr(0b1101111) + chr(49) + chr(0b101100 + 0o10) + chr(0b1101 + 0o50), ord("\x08")), nzTpIcepk0o8(chr(0b0 + 0o60) + '\157' + chr(50) + chr(1403 - 1348) + '\065', ord("\x08")), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(9157 - 9046) + chr(767 - 718) + '\x35' + '\x33', 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + chr(54) + chr(50), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110011), ord("\x08")), nzTpIcepk0o8('\x30' + chr(6701 - 6590) + chr(995 - 945) + '\x35' + '\060', 47214 - 47206), nzTpIcepk0o8(chr(392 - 344) + chr(111) + '\x33' + chr(0b100 + 0o55) + chr(0b110010), 8), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\063' + chr(0b110110) + chr(0b110111), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110010) + chr(0b11010 + 0o27) + chr(0b110101), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\063' + '\x36' + chr(1720 - 1668), 26003 - 25995), nzTpIcepk0o8('\060' + '\x6f' + chr(0b101011 + 0o7) + chr(48) + chr(0b10 + 0o63), 0o10), nzTpIcepk0o8(chr(1589 - 1541) + chr(9761 - 9650) + chr(0b110010) + chr(0b110010) + chr(49), 51642 - 51634), nzTpIcepk0o8('\060' + chr(0b1101111) + '\062' + '\063' + chr(0b110000), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(6182 - 6071) + '\065' + '\x32', ord("\x08")), nzTpIcepk0o8(chr(0b101001 + 0o7) + chr(3415 - 3304) + chr(0b100101 + 0o16) + '\062', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\062' + '\x30' + chr(0b110001), 8), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(51) + chr(0b110001 + 0o4) + '\060', 2578 - 2570), nzTpIcepk0o8(chr(48) + chr(11822 - 11711) + chr(49) + '\062' + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(278 - 230) + '\157' + chr(0b110001 + 0o6) + chr(52), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + '\x33' + chr(0b110100) + chr(0b100 + 0o60), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1010000 + 0o37) + chr(0b110011) + chr(50) + '\x30', 31095 - 31087), nzTpIcepk0o8('\x30' + chr(4688 - 4577) + chr(221 - 172) + chr(0b101 + 0o61) + chr(2589 - 2534), 0b1000), nzTpIcepk0o8('\x30' + chr(0b101110 + 0o101) + chr(0b1110 + 0o44) + chr(60 - 11) + '\x32', ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(0b11001 + 0o30) + '\x31', 54007 - 53999)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + chr(0b1101111) + chr(53) + chr(0b110000), ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xb2'), chr(6404 - 6304) + chr(4339 - 4238) + chr(3997 - 3898) + chr(4426 - 4315) + chr(0b1010101 + 0o17) + chr(0b1100101))('\x75' + chr(0b111111 + 0o65) + chr(102) + chr(45) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def ZERsdc7c1d8E(hXMPsSrOQzbh, FxZHtXEolYsL): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xf5s\xbc\x92\xb8v\xbd\xa4m\xdc[G'), '\144' + chr(0b1011000 + 0o15) + chr(99) + chr(111) + chr(0b1100100) + chr(0b1100101))('\x75' + chr(0b1010001 + 0o43) + chr(0b1100001 + 0o5) + '\055' + chr(0b101011 + 0o15)))(roI3spqORKae(ES5oEprVxulp(b'\xd0d\x93\x8e\xe8T\xad\xdb.\xdeZ}\xa1\xd6\x03\xb9\x17\xd2\x06R$\x8d\xb9\xd0\xa3'), '\144' + chr(0b1100101) + chr(99) + '\x6f' + chr(100) + chr(1271 - 1170))(chr(0b1110101) + chr(116) + chr(0b1100110) + chr(0b101101) + chr(0b111000)), FxZHtXEolYsL) if roI3spqORKae(FxZHtXEolYsL, roI3spqORKae(ES5oEprVxulp(b'\xd52\x94\xa1\xc8y\x8b\xb7=\xcecz'), '\x64' + chr(0b100000 + 0o105) + chr(0b1100011) + chr(2324 - 2213) + chr(0b110110 + 0o56) + '\x65')(chr(0b1110101) + '\164' + chr(8644 - 8542) + '\x2d' + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'\xb2l\x88'), chr(0b1100100) + chr(7030 - 6929) + chr(99) + '\157' + '\x64' + '\x65')(chr(117) + '\164' + chr(0b1100110) + chr(0b11100 + 0o21) + '\x38')): with roI3spqORKae(xx_WP37oeyA3, roI3spqORKae(ES5oEprVxulp(b'\xd8e\xa7\xd9\xd3K\xf3\xb5i\xdaEi'), '\x64' + '\x65' + chr(0b10010 + 0o121) + chr(0b1101111) + chr(100) + chr(0b1100101))('\x75' + chr(0b1010100 + 0o40) + '\146' + '\x2d' + chr(56)))(FxZHtXEolYsL, roI3spqORKae(ES5oEprVxulp(b'\xeei'), chr(2696 - 2596) + chr(0b1100101) + chr(4644 - 4545) + chr(0b1100100 + 0o13) + chr(100) + chr(101))('\x75' + chr(0b1001000 + 0o54) + '\146' + '\x2d' + chr(1514 - 1458))) as rC115QJVCRma: POx95m7SPOVy = VQ83JzKl34Ig(LNUKEwZDIbyb.OiapAM4bM0Ea(rC115QJVCRma.read().lfbFsdWlT3MB(roI3spqORKae(ES5oEprVxulp(b'\xe9\x7f\x94\xc7\xb9'), chr(100) + '\x65' + chr(99) + chr(0b1101111) + chr(3562 - 3462) + chr(0b11010 + 0o113))('\165' + chr(0b1110100) + chr(0b1001010 + 0o34) + chr(0b11101 + 0o20) + chr(56))))) else: with DnU3Rq9N5ala(FxZHtXEolYsL, roI3spqORKae(ES5oEprVxulp(b'\xee'), '\x64' + chr(0b11011 + 0o112) + chr(99) + chr(0b1101111) + chr(100) + '\145')('\165' + '\x74' + chr(0b1000000 + 0o46) + '\x2d' + '\x38'), encoding=roI3spqORKae(ES5oEprVxulp(b'\xe9\x7f\x94\xc7\xb9'), '\144' + chr(0b1100101) + '\x63' + chr(0b1010011 + 0o34) + chr(6751 - 6651) + chr(0b1000011 + 0o42))(chr(8823 - 8706) + chr(0b1000000 + 0o64) + '\146' + '\x2d' + '\x38')) as rC115QJVCRma: POx95m7SPOVy = VQ83JzKl34Ig(LNUKEwZDIbyb.ZERsdc7c1d8E(rC115QJVCRma)) return POx95m7SPOVy
opencobra/memote
memote/support/validation.py
load_cobra_model
def load_cobra_model(path, notifications): """Load a COBRA model with meta information from an SBML document.""" doc = libsbml.readSBML(path) fbc = doc.getPlugin("fbc") sbml_ver = doc.getLevel(), doc.getVersion(), fbc if fbc is None else \ fbc.getVersion() with catch_warnings(record=True) as warnings: simplefilter("always") try: model = read_sbml_model(path) except Exception as err: notifications['errors'].append(str(err)) model = None validate = True else: validate = False notifications['warnings'].extend([str(w.message) for w in warnings]) if validate: run_sbml_validation(doc, notifications) return model, sbml_ver
python
def load_cobra_model(path, notifications): """Load a COBRA model with meta information from an SBML document.""" doc = libsbml.readSBML(path) fbc = doc.getPlugin("fbc") sbml_ver = doc.getLevel(), doc.getVersion(), fbc if fbc is None else \ fbc.getVersion() with catch_warnings(record=True) as warnings: simplefilter("always") try: model = read_sbml_model(path) except Exception as err: notifications['errors'].append(str(err)) model = None validate = True else: validate = False notifications['warnings'].extend([str(w.message) for w in warnings]) if validate: run_sbml_validation(doc, notifications) return model, sbml_ver
[ "def", "load_cobra_model", "(", "path", ",", "notifications", ")", ":", "doc", "=", "libsbml", ".", "readSBML", "(", "path", ")", "fbc", "=", "doc", ".", "getPlugin", "(", "\"fbc\"", ")", "sbml_ver", "=", "doc", ".", "getLevel", "(", ")", ",", "doc", ".", "getVersion", "(", ")", ",", "fbc", "if", "fbc", "is", "None", "else", "fbc", ".", "getVersion", "(", ")", "with", "catch_warnings", "(", "record", "=", "True", ")", "as", "warnings", ":", "simplefilter", "(", "\"always\"", ")", "try", ":", "model", "=", "read_sbml_model", "(", "path", ")", "except", "Exception", "as", "err", ":", "notifications", "[", "'errors'", "]", ".", "append", "(", "str", "(", "err", ")", ")", "model", "=", "None", "validate", "=", "True", "else", ":", "validate", "=", "False", "notifications", "[", "'warnings'", "]", ".", "extend", "(", "[", "str", "(", "w", ".", "message", ")", "for", "w", "in", "warnings", "]", ")", "if", "validate", ":", "run_sbml_validation", "(", "doc", ",", "notifications", ")", "return", "model", ",", "sbml_ver" ]
Load a COBRA model with meta information from an SBML document.
[ "Load", "a", "COBRA", "model", "with", "meta", "information", "from", "an", "SBML", "document", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/validation.py#L30-L49
train
Load a COBRA model with meta information from an SBML document.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(4105 - 3994) + '\063' + chr(55) + '\061', 42249 - 42241), nzTpIcepk0o8(chr(48) + chr(4359 - 4248) + '\x31' + chr(0b110000) + '\065', 4747 - 4739), nzTpIcepk0o8(chr(0b110000) + chr(1222 - 1111) + chr(0b11010 + 0o30) + chr(0b110000) + chr(0b100 + 0o63), ord("\x08")), nzTpIcepk0o8(chr(0b11100 + 0o24) + chr(111) + chr(909 - 860) + '\x36' + chr(0b10011 + 0o35), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(2172 - 2120) + '\x35', 0o10), nzTpIcepk0o8(chr(1788 - 1740) + chr(0b1111 + 0o140) + '\062' + '\x35' + '\x30', 0b1000), nzTpIcepk0o8(chr(2271 - 2223) + '\157' + chr(87 - 37) + chr(0b110101) + chr(0b11010 + 0o34), 0o10), nzTpIcepk0o8(chr(1182 - 1134) + chr(8677 - 8566) + chr(50) + chr(0b110001) + '\063', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101100 + 0o3) + '\065' + chr(0b101101 + 0o7), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(748 - 694) + chr(0b10101 + 0o41), 41712 - 41704), nzTpIcepk0o8(chr(48) + '\157' + chr(54) + '\064', ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(408 - 358) + chr(0b110110) + chr(0b100101 + 0o13), 47132 - 47124), nzTpIcepk0o8(chr(48) + '\x6f' + chr(51) + '\063' + chr(935 - 882), 40305 - 40297), nzTpIcepk0o8(chr(0b100111 + 0o11) + chr(0b1101111) + '\061' + chr(2513 - 2459) + chr(0b10101 + 0o42), 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010) + chr(49), 29387 - 29379), nzTpIcepk0o8(chr(0b100100 + 0o14) + '\157' + '\061' + chr(54), 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\x33' + chr(0b110110) + chr(2438 - 2384), 0b1000), nzTpIcepk0o8(chr(0b1001 + 0o47) + '\x6f' + chr(696 - 646) + chr(2021 - 1968) + '\062', 0b1000), nzTpIcepk0o8(chr(0b1011 + 0o45) + chr(111) + '\x31' + chr(0b110010) + '\x32', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(2191 - 2080) + '\x33' + chr(0b11110 + 0o27) + '\x33', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b10111 + 0o130) + '\063' + chr(0b10100 + 0o36) + '\066', 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010) + chr(0b101011 + 0o5) + chr(165 - 113), 0o10), nzTpIcepk0o8('\060' + chr(1601 - 1490) + '\x31' + '\x31' + '\066', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(313 - 202) + '\x31' + '\x31' + chr(52), 49653 - 49645), nzTpIcepk0o8('\x30' + chr(4022 - 3911) + chr(0b110010) + '\x32' + chr(0b110110 + 0o0), ord("\x08")), nzTpIcepk0o8('\x30' + chr(10666 - 10555) + chr(0b10111 + 0o34) + chr(55) + chr(0b100011 + 0o15), 0b1000), nzTpIcepk0o8(chr(48) + chr(2987 - 2876) + chr(2135 - 2084) + '\x32' + chr(2981 - 2926), 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(50) + '\067' + chr(49), 0o10), nzTpIcepk0o8(chr(721 - 673) + chr(0b1101111) + chr(0b110000 + 0o2) + '\067' + chr(0b110010), 51170 - 51162), nzTpIcepk0o8(chr(0b10011 + 0o35) + '\157' + '\066', ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110010 + 0o0) + chr(50) + '\065', 40650 - 40642), nzTpIcepk0o8('\x30' + chr(111) + '\x32' + '\x32' + chr(1642 - 1593), 47060 - 47052), nzTpIcepk0o8(chr(935 - 887) + '\x6f' + chr(50) + '\x33' + chr(49), 37070 - 37062), nzTpIcepk0o8(chr(0b100110 + 0o12) + chr(111) + chr(50) + chr(450 - 396) + '\066', 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(950 - 899) + chr(0b11100 + 0o27) + chr(0b101100 + 0o6), 0o10), nzTpIcepk0o8('\x30' + chr(8733 - 8622) + chr(1768 - 1719) + '\x32' + '\061', 0b1000), nzTpIcepk0o8('\060' + chr(7792 - 7681) + chr(0b110011) + chr(194 - 146) + chr(0b100000 + 0o23), 15136 - 15128), nzTpIcepk0o8(chr(1982 - 1934) + '\x6f' + chr(0b110001) + chr(0b100010 + 0o21) + '\065', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(129 - 79) + '\062' + '\061', 8), nzTpIcepk0o8('\060' + chr(5721 - 5610) + chr(2367 - 2316) + chr(0b110001) + chr(55), 15565 - 15557)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + chr(0b1001010 + 0o45) + chr(0b110 + 0o57) + chr(0b10001 + 0o37), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xd7'), chr(2680 - 2580) + chr(0b10100 + 0o121) + chr(4035 - 3936) + chr(0b1101111) + '\144' + chr(0b1000110 + 0o37))('\165' + chr(116) + '\x66' + '\055' + chr(2786 - 2730)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def wEL2gOka5sD5(_pSYqrosNb95, cs_JYvA6rYIB): mPg7tgN9u21K = Ep102BqL4nLW.readSBML(_pSYqrosNb95) o4eS3DT0i60x = mPg7tgN9u21K.getPlugin(roI3spqORKae(ES5oEprVxulp(b"\x9f'\xe4"), '\144' + chr(0b10101 + 0o120) + chr(0b110100 + 0o57) + chr(0b1101111) + chr(2431 - 2331) + chr(101))(chr(117) + chr(116) + chr(0b1100110) + chr(0b100100 + 0o11) + chr(0b111000))) mUIFVS9BWttT = (mPg7tgN9u21K.getLevel(), mPg7tgN9u21K.getVersion(), o4eS3DT0i60x if o4eS3DT0i60x is None else o4eS3DT0i60x.getVersion()) with hzOc13bml47U(record=nzTpIcepk0o8(chr(0b110000) + chr(7584 - 7473) + chr(0b10 + 0o57), 0b1000)) as EyN62Frii5S5: Lu6o1E8uFXcx(roI3spqORKae(ES5oEprVxulp(b'\x98)\xf0\x11\\\xdb'), '\x64' + chr(0b1100101) + chr(5149 - 5050) + '\x6f' + '\144' + '\145')(chr(0b1110101) + '\x74' + '\146' + chr(219 - 174) + chr(56))) try: KW0sEfjlgNpM = FuFVU1coi14f(_pSYqrosNb95) except zfo2Sgkz3IVJ as oNU3PevgmWAO: roI3spqORKae(cs_JYvA6rYIB[roI3spqORKae(ES5oEprVxulp(b'\x9c7\xf5\x1fW\xdb'), '\x64' + chr(0b10111 + 0o116) + chr(99) + chr(111) + '\x64' + '\145')(chr(0b1110101) + chr(0b1110100) + chr(102) + '\x2d' + '\x38')], roI3spqORKae(ES5oEprVxulp(b'\xb1\x11\xd4D]\xcf\xe9\xe4FYa\x85'), '\x64' + chr(101) + '\143' + chr(12122 - 12011) + '\x64' + chr(101))(chr(117) + '\x74' + chr(0b100110 + 0o100) + '\x2d' + chr(0b111000)))(N9zlRy29S1SS(oNU3PevgmWAO)) KW0sEfjlgNpM = None G40dcSccAFaB = nzTpIcepk0o8(chr(48) + chr(0b10110 + 0o131) + chr(49), 8) else: G40dcSccAFaB = nzTpIcepk0o8(chr(0b110000) + chr(6736 - 6625) + '\060', 0b1000) roI3spqORKae(cs_JYvA6rYIB[roI3spqORKae(ES5oEprVxulp(b'\x8e$\xf5\x1eL\xc6\xc9\xf8'), '\x64' + chr(5509 - 5408) + '\143' + '\x6f' + chr(0b1000 + 0o134) + '\x65')(chr(6981 - 6864) + chr(0b1110100) + '\x66' + chr(45) + chr(0b111000))], roI3spqORKae(ES5oEprVxulp(b'\xad\x1a\xb4=J\xcc\xe2\xdcstV\xc1'), chr(8446 - 8346) + chr(101) + chr(0b1100011) + chr(0b1101111) + '\x64' + chr(101))(chr(0b1011100 + 0o31) + chr(4810 - 4694) + chr(102) + chr(0b110 + 0o47) + '\x38'))([N9zlRy29S1SS(roI3spqORKae(sm7_CLmeWGR7, roI3spqORKae(ES5oEprVxulp(b'\xbf.\xf4>h\xe0\x9f\xfcsXG\x86'), '\144' + chr(7014 - 6913) + chr(0b11111 + 0o104) + chr(1806 - 1695) + chr(100) + '\145')(chr(0b1110101) + chr(116) + chr(6291 - 6189) + chr(0b101101) + chr(0b10011 + 0o45)))) for sm7_CLmeWGR7 in EyN62Frii5S5]) if G40dcSccAFaB: FPI7zYRP9FzP(mPg7tgN9u21K, cs_JYvA6rYIB) return (KW0sEfjlgNpM, mUIFVS9BWttT)
opencobra/memote
memote/support/validation.py
format_failure
def format_failure(failure): """Format how an error or warning should be displayed.""" return "Line {}, Column {} - #{}: {} - Category: {}, Severity: {}".format( failure.getLine(), failure.getColumn(), failure.getErrorId(), failure.getMessage(), failure.getCategoryAsString(), failure.getSeverity() )
python
def format_failure(failure): """Format how an error or warning should be displayed.""" return "Line {}, Column {} - #{}: {} - Category: {}, Severity: {}".format( failure.getLine(), failure.getColumn(), failure.getErrorId(), failure.getMessage(), failure.getCategoryAsString(), failure.getSeverity() )
[ "def", "format_failure", "(", "failure", ")", ":", "return", "\"Line {}, Column {} - #{}: {} - Category: {}, Severity: {}\"", ".", "format", "(", "failure", ".", "getLine", "(", ")", ",", "failure", ".", "getColumn", "(", ")", ",", "failure", ".", "getErrorId", "(", ")", ",", "failure", ".", "getMessage", "(", ")", ",", "failure", ".", "getCategoryAsString", "(", ")", ",", "failure", ".", "getSeverity", "(", ")", ")" ]
Format how an error or warning should be displayed.
[ "Format", "how", "an", "error", "or", "warning", "should", "be", "displayed", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/validation.py#L52-L61
train
Format a failure message.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(0b1100001 + 0o16) + chr(0b110011) + chr(0b10110 + 0o33) + '\x30', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(1467 - 1417) + chr(0b110101) + '\x33', 0b1000), nzTpIcepk0o8(chr(1632 - 1584) + chr(493 - 382) + chr(51) + '\062' + chr(0b11101 + 0o23), 46858 - 46850), nzTpIcepk0o8(chr(48) + chr(0b1010100 + 0o33) + chr(1031 - 979) + chr(0b110101), 37582 - 37574), nzTpIcepk0o8(chr(48) + '\157' + '\062' + chr(0b110010) + chr(2131 - 2080), 0b1000), nzTpIcepk0o8(chr(1222 - 1174) + chr(4989 - 4878) + '\061' + '\x31' + chr(54), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b101 + 0o152) + chr(49) + chr(0b110011) + chr(0b110010), ord("\x08")), nzTpIcepk0o8('\x30' + chr(7990 - 7879) + chr(1417 - 1368) + chr(0b110110), 0o10), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b11000 + 0o31) + chr(1987 - 1934) + chr(0b110110), 6120 - 6112), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010) + chr(0b110000) + chr(0b110011), 452 - 444), nzTpIcepk0o8('\x30' + chr(111) + chr(0b101111 + 0o2) + chr(0b110111), ord("\x08")), nzTpIcepk0o8('\060' + chr(10414 - 10303) + chr(50) + chr(0b1000 + 0o52) + '\067', ord("\x08")), nzTpIcepk0o8(chr(0b1 + 0o57) + '\x6f' + chr(51) + chr(0b110100) + chr(49), 28694 - 28686), nzTpIcepk0o8(chr(0b110000) + chr(1590 - 1479) + chr(2081 - 2031) + chr(0b100011 + 0o22) + chr(0b110001), 55518 - 55510), nzTpIcepk0o8(chr(0b110000) + chr(968 - 857) + '\x32' + chr(52) + chr(536 - 486), 3046 - 3038), nzTpIcepk0o8('\x30' + '\x6f' + chr(1479 - 1429) + chr(0b101010 + 0o13) + chr(0b11011 + 0o31), 0o10), nzTpIcepk0o8('\060' + chr(0b10100 + 0o133) + '\061' + chr(1686 - 1633) + '\062', 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(2566 - 2515) + chr(51) + '\061', 0o10), nzTpIcepk0o8(chr(528 - 480) + '\157' + chr(0b110010) + '\x35' + chr(52), 8), nzTpIcepk0o8(chr(201 - 153) + '\157' + '\063' + chr(0b110001) + '\062', 63075 - 63067), nzTpIcepk0o8('\060' + chr(0b1101001 + 0o6) + '\x32' + '\x30', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(221 - 171) + chr(1158 - 1110) + chr(0b110110), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x33' + chr(136 - 84) + '\065', ord("\x08")), nzTpIcepk0o8(chr(1101 - 1053) + '\x6f' + chr(0b10111 + 0o36) + chr(1393 - 1338), 22590 - 22582), nzTpIcepk0o8(chr(48) + chr(1384 - 1273) + chr(0b100001 + 0o22) + chr(0b110011) + chr(0b11000 + 0o34), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b11100 + 0o123) + chr(0b1110 + 0o43) + chr(0b110100) + '\064', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b111111 + 0o60) + chr(52) + chr(912 - 857), ord("\x08")), nzTpIcepk0o8(chr(846 - 798) + chr(0b110101 + 0o72) + chr(0b101001 + 0o10) + chr(67 - 13) + chr(0b100101 + 0o15), 0o10), nzTpIcepk0o8(chr(270 - 222) + '\x6f' + chr(0b11000 + 0o31) + chr(0b110011) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + chr(49) + chr(0b10110 + 0o33) + chr(53), 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\063' + '\x34' + chr(0b110011), 0o10), nzTpIcepk0o8('\x30' + chr(10577 - 10466) + '\062' + chr(207 - 155) + '\063', 39086 - 39078), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\061' + chr(0b10011 + 0o41) + chr(49), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(0b11 + 0o60) + chr(0b110010) + chr(918 - 869), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(49) + chr(0b10101 + 0o35) + '\064', 0o10), nzTpIcepk0o8('\060' + chr(0b1101101 + 0o2) + chr(225 - 175) + '\x35' + chr(49), 8), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110001) + chr(0b100 + 0o57) + '\x33', 8), nzTpIcepk0o8(chr(0b1010 + 0o46) + chr(111) + chr(0b11101 + 0o30) + chr(51), 0o10), nzTpIcepk0o8(chr(2001 - 1953) + chr(111) + '\061' + chr(2539 - 2485) + chr(0b1100 + 0o47), 0o10), nzTpIcepk0o8('\060' + chr(5412 - 5301) + chr(50) + chr(0b10101 + 0o40) + '\x37', 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b101101 + 0o3) + chr(111) + chr(53) + '\060', 33045 - 33037)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xe6'), '\x64' + '\145' + chr(0b1100011) + chr(0b1101111) + '\144' + chr(9695 - 9594))(chr(0b1110101) + chr(0b1110100) + chr(0b1100110) + chr(211 - 166) + chr(2789 - 2733)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def IRm6tKSW6MFA(DUbr_vQkcSNT): return roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'\x84\xc2\xbe@\xb35\'"N\xc0`\xfb\x94\xc4\xcc\x8c\x11\xa4\x8c\xe70\xa5\x9eR\xe6D\\\x0f{`\xc3\xe0\x00\xa51\xce4Y\n\x95\xe8\xd0\xad\t\xb3\x1d?x\x0b\xf1f\xe3\x98\x93\x82\xd7\x17'), chr(0b11111 + 0o105) + '\145' + chr(99) + '\157' + '\x64' + '\x65')(chr(0b1110101) + chr(349 - 233) + chr(9348 - 9246) + '\x2d' + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'\xb9\x98\xe3n\xd4}<a?\xdcL\xdd'), '\x64' + chr(0b1010001 + 0o24) + '\143' + chr(111) + chr(0b100011 + 0o101) + chr(101))('\x75' + '\164' + chr(102) + '\055' + '\070'))(roI3spqORKae(DUbr_vQkcSNT, roI3spqORKae(ES5oEprVxulp(b'\xaf\xce\xa4i\xfa ?'), chr(0b1010100 + 0o20) + '\145' + chr(5229 - 5130) + chr(0b1101111) + chr(100) + chr(0b1100101))(chr(0b1011011 + 0o32) + '\164' + '\146' + '\x2d' + chr(0b101000 + 0o20)))(), roI3spqORKae(DUbr_vQkcSNT, roI3spqORKae(ES5oEprVxulp(b'\xaf\xce\xa4f\xfc"/c\x00'), chr(6704 - 6604) + '\145' + chr(99) + '\x6f' + chr(0b1100100) + '\145')(chr(2573 - 2456) + chr(4620 - 4504) + '\x66' + '\055' + chr(1641 - 1585)))(), roI3spqORKae(DUbr_vQkcSNT, roI3spqORKae(ES5oEprVxulp(b"\xaf\xce\xa4`\xe1<5|'\xe7"), chr(0b1100100) + chr(8136 - 8035) + '\x63' + '\157' + chr(0b1100100) + chr(9478 - 9377))(chr(117) + chr(116) + chr(386 - 284) + chr(1041 - 996) + '\x38'))(), roI3spqORKae(DUbr_vQkcSNT, roI3spqORKae(ES5oEprVxulp(b'\xaf\xce\xa4h\xf6=)o\t\xe6'), chr(2098 - 1998) + chr(735 - 634) + '\x63' + '\157' + chr(0b1100100) + chr(101))(chr(117) + chr(116) + '\x66' + chr(45) + '\x38'))(), roI3spqORKae(DUbr_vQkcSNT, roI3spqORKae(ES5oEprVxulp(b'\xaf\xce\xa4f\xf2:?i\x01\xf1v\xd6\x92\xfa\xd6\xde\x03\xb7\xcb'), chr(0b1100100) + chr(0b1000100 + 0o41) + '\143' + '\x6f' + chr(100) + chr(0b10111 + 0o116))(chr(0b1010101 + 0o40) + '\x74' + chr(0b1100110) + chr(119 - 74) + '\x38'))(), roI3spqORKae(DUbr_vQkcSNT, roI3spqORKae(ES5oEprVxulp(b'\xaf\xce\xa4v\xf68?|\x07\xf7v'), '\x64' + chr(5670 - 5569) + chr(99) + chr(0b1101111) + chr(100) + '\x65')('\165' + '\x74' + '\146' + chr(0b101100 + 0o1) + '\x38'))())
opencobra/memote
memote/support/validation.py
run_sbml_validation
def run_sbml_validation(document, notifications): """Report errors and warnings found in an SBML document.""" validator = libsbml.SBMLValidator() validator.validate(document) for i in range(document.getNumErrors()): notifications['errors'].append(format_failure(document.getError(i))) for i in range(validator.getNumFailures()): failure = validator.getFailure(i) if failure.isWarning(): notifications['warnings'].append(format_failure(failure)) else: notifications['errors'].append(format_failure(failure))
python
def run_sbml_validation(document, notifications): """Report errors and warnings found in an SBML document.""" validator = libsbml.SBMLValidator() validator.validate(document) for i in range(document.getNumErrors()): notifications['errors'].append(format_failure(document.getError(i))) for i in range(validator.getNumFailures()): failure = validator.getFailure(i) if failure.isWarning(): notifications['warnings'].append(format_failure(failure)) else: notifications['errors'].append(format_failure(failure))
[ "def", "run_sbml_validation", "(", "document", ",", "notifications", ")", ":", "validator", "=", "libsbml", ".", "SBMLValidator", "(", ")", "validator", ".", "validate", "(", "document", ")", "for", "i", "in", "range", "(", "document", ".", "getNumErrors", "(", ")", ")", ":", "notifications", "[", "'errors'", "]", ".", "append", "(", "format_failure", "(", "document", ".", "getError", "(", "i", ")", ")", ")", "for", "i", "in", "range", "(", "validator", ".", "getNumFailures", "(", ")", ")", ":", "failure", "=", "validator", ".", "getFailure", "(", "i", ")", "if", "failure", ".", "isWarning", "(", ")", ":", "notifications", "[", "'warnings'", "]", ".", "append", "(", "format_failure", "(", "failure", ")", ")", "else", ":", "notifications", "[", "'errors'", "]", ".", "append", "(", "format_failure", "(", "failure", ")", ")" ]
Report errors and warnings found in an SBML document.
[ "Report", "errors", "and", "warnings", "found", "in", "an", "SBML", "document", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/validation.py#L64-L75
train
Validate an SBML document and report errors and warnings.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(310 - 262) + chr(0b1001000 + 0o47) + chr(805 - 756) + chr(53) + '\062', ord("\x08")), nzTpIcepk0o8(chr(1486 - 1438) + chr(0b10010 + 0o135) + chr(1730 - 1680) + chr(0b110111) + '\x37', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110100) + chr(0b110010 + 0o4), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\062' + chr(48), 0b1000), nzTpIcepk0o8('\060' + chr(7317 - 7206) + '\x33' + '\x34' + '\064', 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\061' + chr(1563 - 1515) + '\x35', 0b1000), nzTpIcepk0o8(chr(1612 - 1564) + chr(9206 - 9095) + chr(50) + chr(54) + chr(0b10101 + 0o41), 6091 - 6083), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + '\060', 0o10), nzTpIcepk0o8('\060' + '\157' + '\x31' + '\x31' + chr(0b11001 + 0o30), 0b1000), nzTpIcepk0o8('\x30' + chr(9548 - 9437) + chr(793 - 742) + chr(0b110001) + chr(54), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110101) + chr(52), 0b1000), nzTpIcepk0o8(chr(441 - 393) + chr(436 - 325) + chr(799 - 744) + '\x37', 0b1000), nzTpIcepk0o8(chr(1882 - 1834) + '\x6f' + chr(451 - 398), ord("\x08")), nzTpIcepk0o8(chr(0b100100 + 0o14) + chr(0b1101111) + '\061' + chr(0b111 + 0o54) + chr(1499 - 1446), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(389 - 338) + '\067' + chr(53), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(50) + '\063' + '\063', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\063' + chr(0b110010 + 0o5) + chr(52), 0b1000), nzTpIcepk0o8(chr(0b10111 + 0o31) + '\157' + chr(52) + chr(55), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110011) + chr(0b10010 + 0o44) + chr(0b100 + 0o57), 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010) + chr(0b0 + 0o66) + '\067', 56181 - 56173), nzTpIcepk0o8('\x30' + chr(0b110010 + 0o75) + '\063' + '\x37' + '\063', ord("\x08")), nzTpIcepk0o8(chr(827 - 779) + chr(0b100011 + 0o114) + chr(0b110001) + chr(0b1 + 0o66) + chr(49), 52828 - 52820), nzTpIcepk0o8(chr(1704 - 1656) + chr(111) + '\064' + chr(0b110010), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110001) + '\065' + '\061', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(11435 - 11324) + chr(0b110001 + 0o2) + chr(51) + chr(48), 46924 - 46916), nzTpIcepk0o8(chr(48) + '\157' + '\x33' + '\x35' + chr(0b110101), 65114 - 65106), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(1505 - 1452) + chr(2525 - 2474), 0o10), nzTpIcepk0o8('\x30' + chr(0b1001110 + 0o41) + chr(0b11110 + 0o25) + chr(2861 - 2807) + chr(0b110001 + 0o0), 0b1000), nzTpIcepk0o8('\060' + chr(10389 - 10278) + '\063' + '\064', 0o10), nzTpIcepk0o8(chr(0b111 + 0o51) + '\x6f' + '\063' + '\x35' + chr(0b110101), 8), nzTpIcepk0o8(chr(48) + '\157' + '\061' + '\062' + '\x32', ord("\x08")), nzTpIcepk0o8(chr(0b11101 + 0o23) + chr(9013 - 8902) + '\x33' + '\060' + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x37' + '\x33', 13243 - 13235), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(0b1101111) + chr(0b11010 + 0o27) + '\x32' + '\067', 0o10), nzTpIcepk0o8(chr(48) + chr(0b10111 + 0o130) + chr(0b110010) + chr(0b11 + 0o57) + '\060', 0b1000), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b111010 + 0o65) + chr(0b110011), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110001) + '\062' + '\062', 8), nzTpIcepk0o8(chr(0b110000) + chr(0b11001 + 0o126) + chr(0b110001) + '\x34', 0o10), nzTpIcepk0o8(chr(0b110000 + 0o0) + '\x6f' + chr(50) + chr(799 - 751) + '\065', 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b1001 + 0o51) + chr(0b10011 + 0o35) + chr(0b1111 + 0o43), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + chr(11002 - 10891) + chr(2235 - 2182) + chr(48), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'D'), '\x64' + '\145' + '\x63' + '\x6f' + '\x64' + chr(0b110100 + 0o61))(chr(117) + '\164' + chr(0b1000010 + 0o44) + '\055' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def FPI7zYRP9FzP(K6an18Ylsl3S, cs_JYvA6rYIB): FvWAWsc78sWr = Ep102BqL4nLW.SBMLValidator() roI3spqORKae(FvWAWsc78sWr, roI3spqORKae(ES5oEprVxulp(b'-\x8b\x16t\x87\x16\xd5k\x08\x88M}'), chr(100) + chr(274 - 173) + chr(99) + chr(0b11101 + 0o122) + chr(0b1100100) + chr(0b1100101))(chr(0b1110101) + chr(818 - 702) + chr(102) + '\055' + chr(364 - 308)))(K6an18Ylsl3S) for ZlbFMSG8gCoF in bbT2xIe5pzk7(roI3spqORKae(K6an18Ylsl3S, roI3spqORKae(ES5oEprVxulp(b'\r\xdaR^\x91(\xf3z;\xa1^L'), '\144' + '\x65' + chr(0b1100011) + chr(3866 - 3755) + chr(0b1100100) + chr(0b1100101))(chr(8718 - 8601) + chr(4840 - 4724) + chr(0b101100 + 0o72) + chr(0b11010 + 0o23) + chr(0b101011 + 0o15)))()): roI3spqORKae(cs_JYvA6rYIB[roI3spqORKae(ES5oEprVxulp(b'\x0f\xcdT\x7f\x966'), '\x64' + chr(101) + '\143' + chr(111) + chr(0b1100100) + chr(0b1100101))(chr(0b1110101) + chr(11125 - 11009) + '\x66' + chr(0b1011 + 0o42) + '\x38')], roI3spqORKae(ES5oEprVxulp(b'"\xebu$\x9c"\xf1g#\xa1y\n'), chr(0b1100100) + chr(0b1100101) + chr(0b101 + 0o136) + chr(0b101011 + 0o104) + chr(100) + '\145')(chr(117) + '\x74' + chr(102) + chr(0b1101 + 0o40) + chr(2743 - 2687)))(IRm6tKSW6MFA(roI3spqORKae(K6an18Ylsl3S, roI3spqORKae(ES5oEprVxulp(b'\r\xdaRU\x967\xd9z'), chr(0b100011 + 0o101) + chr(0b1100101) + '\x63' + '\157' + '\x64' + chr(1298 - 1197))(chr(2344 - 2227) + '\164' + chr(0b1100110) + chr(852 - 807) + '\070'))(ZlbFMSG8gCoF))) for ZlbFMSG8gCoF in bbT2xIe5pzk7(roI3spqORKae(FvWAWsc78sWr, roI3spqORKae(ES5oEprVxulp(b'\r\xdaR^\x91(\xf0i \xa2YM`.'), chr(4225 - 4125) + chr(2246 - 2145) + chr(7860 - 7761) + '\x6f' + chr(0b1000100 + 0o40) + chr(101))(chr(117) + '\x74' + chr(0b1001 + 0o135) + chr(473 - 428) + chr(2578 - 2522)))()): DUbr_vQkcSNT = FvWAWsc78sWr.getFailure(ZlbFMSG8gCoF) if roI3spqORKae(DUbr_vQkcSNT, roI3spqORKae(ES5oEprVxulp(b'\x03\xccqq\x96+\xdff.'), chr(100) + '\145' + chr(99) + chr(0b111111 + 0o60) + '\144' + chr(0b1100101))(chr(117) + chr(12388 - 12272) + chr(4081 - 3979) + chr(0b101101) + chr(3066 - 3010)))(): roI3spqORKae(cs_JYvA6rYIB[roI3spqORKae(ES5oEprVxulp(b'\x1d\xdeT~\x8d+\xd1{'), chr(0b1100100) + '\145' + chr(354 - 255) + chr(9354 - 9243) + '\144' + chr(0b1011011 + 0o12))(chr(0b1110101) + '\x74' + chr(102) + chr(0b1100 + 0o41) + chr(0b11010 + 0o36))], roI3spqORKae(ES5oEprVxulp(b'"\xebu$\x9c"\xf1g#\xa1y\n'), chr(8713 - 8613) + chr(0b1100101) + chr(0b1100011) + chr(4891 - 4780) + '\144' + '\x65')(chr(0b1000001 + 0o64) + chr(0b1110100) + chr(270 - 168) + chr(45) + chr(3051 - 2995)))(IRm6tKSW6MFA(DUbr_vQkcSNT)) else: roI3spqORKae(cs_JYvA6rYIB[roI3spqORKae(ES5oEprVxulp(b'\x0f\xcdT\x7f\x966'), chr(0b10010 + 0o122) + chr(101) + '\x63' + chr(111) + chr(0b1100100) + '\145')(chr(117) + chr(0b1101010 + 0o12) + '\146' + '\x2d' + '\070')], roI3spqORKae(ES5oEprVxulp(b'"\xebu$\x9c"\xf1g#\xa1y\n'), '\144' + '\145' + chr(99) + '\x6f' + chr(100) + '\x65')(chr(9654 - 9537) + chr(9343 - 9227) + chr(0b1010010 + 0o24) + chr(0b11 + 0o52) + '\x38'))(IRm6tKSW6MFA(DUbr_vQkcSNT))
opencobra/memote
memote/suite/results/sql_result_manager.py
SQLResultManager.store
def store(self, result, commit=None, **kwargs): """ Store a result in a JSON file attaching git meta information. Parameters ---------- result : memote.MemoteResult The dictionary structure of results. commit : str, optional Unique hexsha of the desired commit. kwargs : Passed to parent function. """ git_info = self.record_git_info(commit) try: row = self.session.query(Result). \ filter_by(hexsha=git_info.hexsha). \ one() LOGGER.info("Updating result '%s'.", git_info.hexsha) row.memote_result = result except NoResultFound: row = Result(memote_result=result) LOGGER.info("Storing result '%s'.", git_info.hexsha) row.hexsha = git_info.hexsha row.author = git_info.author row.email = git_info.email row.authored_on = git_info.authored_on self.session.add(row) self.session.commit()
python
def store(self, result, commit=None, **kwargs): """ Store a result in a JSON file attaching git meta information. Parameters ---------- result : memote.MemoteResult The dictionary structure of results. commit : str, optional Unique hexsha of the desired commit. kwargs : Passed to parent function. """ git_info = self.record_git_info(commit) try: row = self.session.query(Result). \ filter_by(hexsha=git_info.hexsha). \ one() LOGGER.info("Updating result '%s'.", git_info.hexsha) row.memote_result = result except NoResultFound: row = Result(memote_result=result) LOGGER.info("Storing result '%s'.", git_info.hexsha) row.hexsha = git_info.hexsha row.author = git_info.author row.email = git_info.email row.authored_on = git_info.authored_on self.session.add(row) self.session.commit()
[ "def", "store", "(", "self", ",", "result", ",", "commit", "=", "None", ",", "*", "*", "kwargs", ")", ":", "git_info", "=", "self", ".", "record_git_info", "(", "commit", ")", "try", ":", "row", "=", "self", ".", "session", ".", "query", "(", "Result", ")", ".", "filter_by", "(", "hexsha", "=", "git_info", ".", "hexsha", ")", ".", "one", "(", ")", "LOGGER", ".", "info", "(", "\"Updating result '%s'.\"", ",", "git_info", ".", "hexsha", ")", "row", ".", "memote_result", "=", "result", "except", "NoResultFound", ":", "row", "=", "Result", "(", "memote_result", "=", "result", ")", "LOGGER", ".", "info", "(", "\"Storing result '%s'.\"", ",", "git_info", ".", "hexsha", ")", "row", ".", "hexsha", "=", "git_info", ".", "hexsha", "row", ".", "author", "=", "git_info", ".", "author", "row", ".", "email", "=", "git_info", ".", "email", "row", ".", "authored_on", "=", "git_info", ".", "authored_on", "self", ".", "session", ".", "add", "(", "row", ")", "self", ".", "session", ".", "commit", "(", ")" ]
Store a result in a JSON file attaching git meta information. Parameters ---------- result : memote.MemoteResult The dictionary structure of results. commit : str, optional Unique hexsha of the desired commit. kwargs : Passed to parent function.
[ "Store", "a", "result", "in", "a", "JSON", "file", "attaching", "git", "meta", "information", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/results/sql_result_manager.py#L58-L87
train
Store a result in a JSON file attaching git meta information.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b100000 + 0o23) + chr(55) + chr(1984 - 1936), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(2224 - 2175) + chr(51) + chr(1091 - 1040), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(51) + chr(1475 - 1420), 38901 - 38893), nzTpIcepk0o8(chr(48) + '\157' + chr(0b10010 + 0o41) + '\060' + '\061', 18262 - 18254), nzTpIcepk0o8(chr(0b100111 + 0o11) + chr(0b1011010 + 0o25) + chr(50) + chr(646 - 596) + '\063', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b1100 + 0o47) + '\x30' + '\x32', 25798 - 25790), nzTpIcepk0o8(chr(48) + chr(5547 - 5436) + chr(51) + chr(0b110001) + chr(49), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x36' + chr(2338 - 2288), 19857 - 19849), nzTpIcepk0o8(chr(776 - 728) + '\x6f' + chr(2025 - 1975) + chr(50) + chr(0b110111), 52633 - 52625), nzTpIcepk0o8(chr(0b10010 + 0o36) + chr(0b1101111) + chr(0b10100 + 0o35) + chr(48) + '\065', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(2380 - 2330) + chr(0b11101 + 0o26) + chr(251 - 198), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\063' + '\063' + '\x34', 0o10), nzTpIcepk0o8(chr(1732 - 1684) + chr(0b1101111) + chr(0b110010) + chr(0b11010 + 0o26) + chr(52), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(50), 64129 - 64121), nzTpIcepk0o8(chr(0b110000) + chr(3506 - 3395) + chr(654 - 603) + chr(0b110010 + 0o1) + chr(0b11010 + 0o31), ord("\x08")), nzTpIcepk0o8('\060' + chr(3686 - 3575) + '\061' + chr(2559 - 2505) + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b100010 + 0o115) + chr(51) + chr(0b110100) + chr(0b101001 + 0o16), 0o10), nzTpIcepk0o8(chr(0b101101 + 0o3) + '\157' + '\x37' + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\063' + chr(48) + '\064', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110010) + '\063', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + '\062' + chr(0b110111) + chr(1247 - 1197), 33657 - 33649), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\062' + '\065' + chr(50), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\063' + '\064' + '\x32', ord("\x08")), nzTpIcepk0o8('\060' + chr(4974 - 4863) + chr(0b110010) + '\062' + chr(51), 8), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(6403 - 6292) + chr(521 - 472) + '\061' + chr(48), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(3534 - 3423) + chr(0b10111 + 0o32) + chr(1443 - 1390) + chr(949 - 896), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(1144 - 1089) + '\x32', 12002 - 11994), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(2426 - 2376) + '\x33' + '\060', 24907 - 24899), nzTpIcepk0o8(chr(0b11001 + 0o27) + chr(0b1101100 + 0o3) + '\065', 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(0b100100 + 0o16) + chr(1664 - 1611) + '\x33', ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\x34' + '\066', 0o10), nzTpIcepk0o8(chr(0b101001 + 0o7) + chr(111) + chr(0b110001) + '\067' + chr(143 - 91), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(4829 - 4718) + chr(51) + '\065' + '\x36', 37386 - 37378), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\061' + chr(0b110101) + '\060', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(52) + chr(49), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x31' + chr(0b11111 + 0o30) + '\x30', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(123 - 73) + chr(51) + chr(1043 - 995), 8), nzTpIcepk0o8(chr(2183 - 2135) + '\x6f' + '\062' + '\061' + '\067', ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(2339 - 2287) + chr(0b100001 + 0o26), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110001) + chr(1787 - 1736) + '\x36', 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(111) + '\x35' + chr(48), 30623 - 30615)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xd6'), chr(100) + '\145' + chr(99) + chr(4913 - 4802) + '\x64' + chr(0b111011 + 0o52))(chr(0b110011 + 0o102) + chr(116) + '\146' + '\055' + chr(2359 - 2303)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Yws2kZcdmcdB(hXMPsSrOQzbh, POx95m7SPOVy, An6zT8UjKIsO=None, **q5n0sHDDTy90): Kdo_ylGtG7GR = hXMPsSrOQzbh.record_git_info(An6zT8UjKIsO) try: o6UWUO21mH25 = hXMPsSrOQzbh.session.query(D6q5RoiAcKRx).filter_by(hexsha=Kdo_ylGtG7GR.hexsha).one() roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x91#Q\xb9\xaa\x8e\xbem\xa6"\xef\x93'), '\144' + chr(0b1100101) + chr(0b1011111 + 0o4) + '\157' + chr(100) + chr(0b11111 + 0o106))(chr(0b1110101) + chr(0b110111 + 0o75) + chr(5243 - 5141) + chr(1020 - 975) + chr(1943 - 1887)))(roI3spqORKae(ES5oEprVxulp(b'\xad+{\xa0\xe7\xab\xa7U\xb77\xf8\xaf\xf1n\xafW\xc0\x19\xb74\x94'), '\x64' + '\x65' + '\143' + chr(111) + chr(0b1011010 + 0o12) + '\145')('\165' + chr(0b1110010 + 0o2) + chr(0b1100110) + '\055' + chr(0b111000)), roI3spqORKae(Kdo_ylGtG7GR, roI3spqORKae(ES5oEprVxulp(b'\xb24/\xf5\xf6\x89\x8eU\xff-\xa4\xb5'), chr(100) + '\145' + chr(6523 - 6424) + chr(111) + '\x64' + chr(0b110011 + 0o62))(chr(0b1110101) + chr(7893 - 7777) + chr(10386 - 10284) + chr(0b101101) + '\070'))) o6UWUO21mH25.iUA_w3rbPxi3 = POx95m7SPOVy except DxH7QtdxuA7s: o6UWUO21mH25 = D6q5RoiAcKRx(memote_result=POx95m7SPOVy) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x91#Q\xb9\xaa\x8e\xbem\xa6"\xef\x93'), chr(0b1000110 + 0o36) + '\145' + '\x63' + chr(0b111100 + 0o63) + '\144' + chr(0b1100101))(chr(3602 - 3485) + '\x74' + chr(3310 - 3208) + chr(0b101101) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'\xab/p\xb3\xfa\xac\xae\x12\xe5 \xee\xa9\xe8v\xfbP\xc2O\xe3='), chr(0b1100100) + '\145' + chr(0b111100 + 0o47) + '\157' + chr(0b100 + 0o140) + chr(101))(chr(0b1110101) + '\164' + chr(102) + '\x2d' + '\070'), roI3spqORKae(Kdo_ylGtG7GR, roI3spqORKae(ES5oEprVxulp(b'\xb24/\xf5\xf6\x89\x8eU\xff-\xa4\xb5'), '\144' + '\x65' + '\x63' + '\x6f' + chr(0b101111 + 0o65) + chr(5893 - 5792))('\x75' + chr(116) + chr(0b111001 + 0o55) + chr(45) + chr(0b111000)))) o6UWUO21mH25.Jo04eKGghh9i = Kdo_ylGtG7GR.Jo04eKGghh9i o6UWUO21mH25.u2TBKXo7sv5e = Kdo_ylGtG7GR.u2TBKXo7sv5e o6UWUO21mH25.BhwKvDaXtiJh = Kdo_ylGtG7GR.BhwKvDaXtiJh o6UWUO21mH25.NsJqp5mbhZRM = Kdo_ylGtG7GR.NsJqp5mbhZRM roI3spqORKae(hXMPsSrOQzbh.session, roI3spqORKae(ES5oEprVxulp(b'\x8dhN\xa5\xfa\xb1\x80C\xd3#\xde\xb8'), chr(0b1100100) + chr(8107 - 8006) + '\x63' + '\x6f' + '\144' + chr(3165 - 3064))(chr(4259 - 4142) + '\x74' + chr(102) + chr(0b101101) + chr(0b111000)))(o6UWUO21mH25) roI3spqORKae(hXMPsSrOQzbh.session, roI3spqORKae(ES5oEprVxulp(b'\xb95)\xbb\xc7\xfa\x9cX\xdc\x0c\xee\x93'), chr(0b1100100) + chr(9687 - 9586) + chr(0b0 + 0o143) + '\157' + '\144' + chr(0b1100101))(chr(117) + chr(0b1110100) + chr(0b1100110) + '\055' + chr(2743 - 2687)))()
opencobra/memote
memote/suite/results/sql_result_manager.py
SQLResultManager.load
def load(self, commit=None): """Load a result from the database.""" git_info = self.record_git_info(commit) LOGGER.info("Loading result from '%s'.", git_info.hexsha) result = MemoteResult( self.session.query(Result.memote_result). filter_by(hexsha=git_info.hexsha). one().memote_result) # Add git info so the object is equivalent to the one returned by the # RepoResultManager. self.add_git(result.meta, git_info) return result
python
def load(self, commit=None): """Load a result from the database.""" git_info = self.record_git_info(commit) LOGGER.info("Loading result from '%s'.", git_info.hexsha) result = MemoteResult( self.session.query(Result.memote_result). filter_by(hexsha=git_info.hexsha). one().memote_result) # Add git info so the object is equivalent to the one returned by the # RepoResultManager. self.add_git(result.meta, git_info) return result
[ "def", "load", "(", "self", ",", "commit", "=", "None", ")", ":", "git_info", "=", "self", ".", "record_git_info", "(", "commit", ")", "LOGGER", ".", "info", "(", "\"Loading result from '%s'.\"", ",", "git_info", ".", "hexsha", ")", "result", "=", "MemoteResult", "(", "self", ".", "session", ".", "query", "(", "Result", ".", "memote_result", ")", ".", "filter_by", "(", "hexsha", "=", "git_info", ".", "hexsha", ")", ".", "one", "(", ")", ".", "memote_result", ")", "# Add git info so the object is equivalent to the one returned by the", "# RepoResultManager.", "self", ".", "add_git", "(", "result", ".", "meta", ",", "git_info", ")", "return", "result" ]
Load a result from the database.
[ "Load", "a", "result", "from", "the", "database", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/results/sql_result_manager.py#L89-L100
train
Load a result from the database.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110010) + chr(0b110100) + chr(54), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(51) + chr(54) + '\x34', ord("\x08")), nzTpIcepk0o8(chr(0b10111 + 0o31) + '\x6f' + chr(51) + '\065' + '\061', 0b1000), nzTpIcepk0o8(chr(394 - 346) + '\x6f' + chr(0b110111) + '\067', 23750 - 23742), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(1312 - 1201) + chr(51) + chr(810 - 760), 0b1000), nzTpIcepk0o8(chr(682 - 634) + chr(6840 - 6729) + chr(0b1111 + 0o42) + chr(159 - 107) + '\x34', 62774 - 62766), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(2865 - 2811), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1100100 + 0o13) + chr(0b110101) + chr(0b100001 + 0o21), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(809 - 758) + chr(0b11100 + 0o32) + chr(0b0 + 0o66), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(1993 - 1943) + chr(0b100010 + 0o22) + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(1641 - 1593) + '\x6f' + chr(0b11 + 0o60) + chr(1117 - 1068) + '\x34', ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\x31' + chr(52) + '\x31', ord("\x08")), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(4824 - 4713) + chr(2472 - 2419) + chr(0b110000 + 0o0), 0b1000), nzTpIcepk0o8('\060' + chr(3740 - 3629) + '\065', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(4416 - 4305) + chr(52), 51406 - 51398), nzTpIcepk0o8(chr(0b11100 + 0o24) + '\157' + '\x33' + '\064' + chr(0b1111 + 0o45), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(49) + chr(0b110110) + chr(2173 - 2122), 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(49) + '\x33' + chr(53), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(8451 - 8340) + chr(55) + chr(0b110110), 18803 - 18795), nzTpIcepk0o8(chr(0b11011 + 0o25) + '\157' + chr(0b110010 + 0o0) + chr(48) + chr(975 - 922), 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(1637 - 1587) + chr(0b11111 + 0o26) + chr(588 - 539), 0o10), nzTpIcepk0o8(chr(1633 - 1585) + '\x6f' + chr(51) + '\066' + '\x36', 8), nzTpIcepk0o8('\x30' + '\157' + '\061' + chr(0b110000) + chr(52), 0b1000), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(0b1101000 + 0o7) + chr(49) + chr(0b110001) + chr(54), 3849 - 3841), nzTpIcepk0o8(chr(1246 - 1198) + chr(3007 - 2896) + '\062' + chr(0b110010), 0b1000), nzTpIcepk0o8(chr(0b110000 + 0o0) + chr(0b1101111) + chr(0b11110 + 0o26) + '\x31', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(55) + chr(230 - 179), ord("\x08")), nzTpIcepk0o8(chr(785 - 737) + chr(3342 - 3231) + chr(0b110111) + chr(2118 - 2067), 8), nzTpIcepk0o8(chr(2095 - 2047) + '\157' + chr(0b1011 + 0o46) + chr(0b110000) + chr(0b10011 + 0o36), 49689 - 49681), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110001) + chr(0b110110) + chr(50), 0b1000), nzTpIcepk0o8(chr(1082 - 1034) + chr(0b1101111) + '\x31' + '\x36' + chr(53), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(2978 - 2867) + chr(50) + chr(0b110011), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110011) + '\065' + chr(0b110001), 8), nzTpIcepk0o8('\060' + '\x6f' + chr(51) + '\x36' + '\x34', 8), nzTpIcepk0o8(chr(964 - 916) + chr(111) + chr(1155 - 1105) + chr(0b110010) + chr(656 - 606), 21386 - 21378), nzTpIcepk0o8(chr(0b11111 + 0o21) + '\x6f' + '\062' + chr(0b110100) + '\x36', 8), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b100 + 0o57) + chr(0b110001) + chr(0b101100 + 0o11), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b100100 + 0o16) + chr(0b110100) + chr(0b110111), 35327 - 35319), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x31' + '\066' + chr(0b101000 + 0o10), 41659 - 41651), nzTpIcepk0o8(chr(0b110000) + chr(0b1000100 + 0o53) + '\063' + chr(0b11110 + 0o30) + chr(2082 - 2034), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(1667 - 1556) + chr(0b110101) + '\060', 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x88'), chr(0b1111 + 0o125) + '\x65' + chr(1485 - 1386) + chr(0b1100111 + 0o10) + '\144' + '\145')('\165' + chr(116) + chr(7674 - 7572) + chr(411 - 366) + chr(1773 - 1717)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def ZERsdc7c1d8E(hXMPsSrOQzbh, An6zT8UjKIsO=None): Kdo_ylGtG7GR = hXMPsSrOQzbh.record_git_info(An6zT8UjKIsO) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xcf\x8c\xa7G#(qu\xc7\xc3\xbe.'), chr(2648 - 2548) + chr(0b100111 + 0o76) + chr(99) + chr(9805 - 9694) + '\x64' + '\x65')(chr(0b111111 + 0o66) + chr(10159 - 10043) + chr(5400 - 5298) + '\055' + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'\xea\x9b\x88[s\na\n\x84\xc1\xbf\x14Dq$\x82\x012S\xa5\x8e\xd37i<'), '\144' + chr(778 - 677) + chr(0b110111 + 0o54) + chr(0b1101111) + '\144' + '\145')(chr(117) + chr(0b1110100) + '\x66' + chr(440 - 395) + '\x38'), roI3spqORKae(Kdo_ylGtG7GR, roI3spqORKae(ES5oEprVxulp(b'\xec\x9b\xd9\x0b\x7f/AM\x9e\xcc\xf5\x08'), '\x64' + chr(1539 - 1438) + chr(0b101011 + 0o70) + chr(111) + '\x64' + chr(101))('\x75' + '\x74' + '\x66' + chr(0b101011 + 0o2) + chr(2535 - 2479)))) POx95m7SPOVy = VQ83JzKl34Ig(hXMPsSrOQzbh.session.query(D6q5RoiAcKRx.memote_result).filter_by(hexsha=Kdo_ylGtG7GR.hexsha).one().iUA_w3rbPxi3) roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\xc7\x90\x8d`}\rr'), '\x64' + chr(2728 - 2627) + chr(99) + chr(111) + chr(8887 - 8787) + chr(0b11000 + 0o115))(chr(0b1101101 + 0o10) + '\164' + '\146' + chr(0b101101) + chr(0b101111 + 0o11)))(roI3spqORKae(POx95m7SPOVy, roI3spqORKae(ES5oEprVxulp(b'\xe2\xb7\xa2wr-0R\xba\xfc\xf5\x06'), chr(0b10 + 0o142) + chr(4341 - 4240) + chr(0b11000 + 0o113) + chr(0b1101101 + 0o2) + chr(0b1100100) + '\x65')(chr(10493 - 10376) + chr(0b1110100) + chr(908 - 806) + chr(0b101101) + '\070')), Kdo_ylGtG7GR) return POx95m7SPOVy
opencobra/memote
memote/suite/reporting/history.py
HistoryReport.collect_history
def collect_history(self): """Build the structure of results in terms of a commit history.""" def format_data(data): """Format result data according to the user-defined type.""" # TODO Remove this failsafe once proper error handling is in place. if type == "percent" or data is None: # Return an empty list here to reduce the output file size. # The angular report will ignore the `data` and instead display # the `metric`. return [] if type == "count": return len(data) return data base = dict() tests = base.setdefault("tests", dict()) score = base.setdefault("score", dict()) score_collection = score.setdefault("total_score", dict()) for branch, commits in self._history.iter_branches(): for commit in reversed(commits): result = self.result = self._history.get_result(commit) # Calculate the score for each result and store all the total # scores for each commit in the base dictionary. self.compute_score() total_score = self.result["score"]["total_score"] score_collection.setdefault("history", list()) score_collection["format_type"] = "score" score_collection["history"].append({ "branch": branch, "commit": commit, "metric": total_score}) # Now arrange the results for each test into the appropriate # format. Specifically such that the Accordion and the Vega # Plot components can easily read them. for test in result.cases: tests.setdefault(test, dict()) if "title" not in tests[test]: tests[test]["title"] = result.cases[test]["title"] if "summary" not in tests[test]: tests[test]["summary"] = result.cases[test]["summary"] if "type" not in tests[test]: tests[test]["format_type"] = result.cases[test][ "format_type"] type = tests[test]["format_type"] metric = result.cases[test].get("metric") data = result.cases[test].get("data") res = result.cases[test].get("result") if isinstance(metric, dict): tests[test].setdefault("history", dict()) for param in metric: tests[test]["history"].setdefault(param, list()). \ append({ "branch": branch, "commit": commit, "metric": metric.get(param), "data": format_data(data.get(param)), "result": res.get(param)}) else: tests[test].setdefault("history", list()).append({ "branch": branch, "commit": commit, "metric": metric, "data": format_data(data), "result": res }) return base
python
def collect_history(self): """Build the structure of results in terms of a commit history.""" def format_data(data): """Format result data according to the user-defined type.""" # TODO Remove this failsafe once proper error handling is in place. if type == "percent" or data is None: # Return an empty list here to reduce the output file size. # The angular report will ignore the `data` and instead display # the `metric`. return [] if type == "count": return len(data) return data base = dict() tests = base.setdefault("tests", dict()) score = base.setdefault("score", dict()) score_collection = score.setdefault("total_score", dict()) for branch, commits in self._history.iter_branches(): for commit in reversed(commits): result = self.result = self._history.get_result(commit) # Calculate the score for each result and store all the total # scores for each commit in the base dictionary. self.compute_score() total_score = self.result["score"]["total_score"] score_collection.setdefault("history", list()) score_collection["format_type"] = "score" score_collection["history"].append({ "branch": branch, "commit": commit, "metric": total_score}) # Now arrange the results for each test into the appropriate # format. Specifically such that the Accordion and the Vega # Plot components can easily read them. for test in result.cases: tests.setdefault(test, dict()) if "title" not in tests[test]: tests[test]["title"] = result.cases[test]["title"] if "summary" not in tests[test]: tests[test]["summary"] = result.cases[test]["summary"] if "type" not in tests[test]: tests[test]["format_type"] = result.cases[test][ "format_type"] type = tests[test]["format_type"] metric = result.cases[test].get("metric") data = result.cases[test].get("data") res = result.cases[test].get("result") if isinstance(metric, dict): tests[test].setdefault("history", dict()) for param in metric: tests[test]["history"].setdefault(param, list()). \ append({ "branch": branch, "commit": commit, "metric": metric.get(param), "data": format_data(data.get(param)), "result": res.get(param)}) else: tests[test].setdefault("history", list()).append({ "branch": branch, "commit": commit, "metric": metric, "data": format_data(data), "result": res }) return base
[ "def", "collect_history", "(", "self", ")", ":", "def", "format_data", "(", "data", ")", ":", "\"\"\"Format result data according to the user-defined type.\"\"\"", "# TODO Remove this failsafe once proper error handling is in place.", "if", "type", "==", "\"percent\"", "or", "data", "is", "None", ":", "# Return an empty list here to reduce the output file size.", "# The angular report will ignore the `data` and instead display", "# the `metric`.", "return", "[", "]", "if", "type", "==", "\"count\"", ":", "return", "len", "(", "data", ")", "return", "data", "base", "=", "dict", "(", ")", "tests", "=", "base", ".", "setdefault", "(", "\"tests\"", ",", "dict", "(", ")", ")", "score", "=", "base", ".", "setdefault", "(", "\"score\"", ",", "dict", "(", ")", ")", "score_collection", "=", "score", ".", "setdefault", "(", "\"total_score\"", ",", "dict", "(", ")", ")", "for", "branch", ",", "commits", "in", "self", ".", "_history", ".", "iter_branches", "(", ")", ":", "for", "commit", "in", "reversed", "(", "commits", ")", ":", "result", "=", "self", ".", "result", "=", "self", ".", "_history", ".", "get_result", "(", "commit", ")", "# Calculate the score for each result and store all the total", "# scores for each commit in the base dictionary.", "self", ".", "compute_score", "(", ")", "total_score", "=", "self", ".", "result", "[", "\"score\"", "]", "[", "\"total_score\"", "]", "score_collection", ".", "setdefault", "(", "\"history\"", ",", "list", "(", ")", ")", "score_collection", "[", "\"format_type\"", "]", "=", "\"score\"", "score_collection", "[", "\"history\"", "]", ".", "append", "(", "{", "\"branch\"", ":", "branch", ",", "\"commit\"", ":", "commit", ",", "\"metric\"", ":", "total_score", "}", ")", "# Now arrange the results for each test into the appropriate", "# format. Specifically such that the Accordion and the Vega", "# Plot components can easily read them.", "for", "test", "in", "result", ".", "cases", ":", "tests", ".", "setdefault", "(", "test", ",", "dict", "(", ")", ")", "if", "\"title\"", "not", "in", "tests", "[", "test", "]", ":", "tests", "[", "test", "]", "[", "\"title\"", "]", "=", "result", ".", "cases", "[", "test", "]", "[", "\"title\"", "]", "if", "\"summary\"", "not", "in", "tests", "[", "test", "]", ":", "tests", "[", "test", "]", "[", "\"summary\"", "]", "=", "result", ".", "cases", "[", "test", "]", "[", "\"summary\"", "]", "if", "\"type\"", "not", "in", "tests", "[", "test", "]", ":", "tests", "[", "test", "]", "[", "\"format_type\"", "]", "=", "result", ".", "cases", "[", "test", "]", "[", "\"format_type\"", "]", "type", "=", "tests", "[", "test", "]", "[", "\"format_type\"", "]", "metric", "=", "result", ".", "cases", "[", "test", "]", ".", "get", "(", "\"metric\"", ")", "data", "=", "result", ".", "cases", "[", "test", "]", ".", "get", "(", "\"data\"", ")", "res", "=", "result", ".", "cases", "[", "test", "]", ".", "get", "(", "\"result\"", ")", "if", "isinstance", "(", "metric", ",", "dict", ")", ":", "tests", "[", "test", "]", ".", "setdefault", "(", "\"history\"", ",", "dict", "(", ")", ")", "for", "param", "in", "metric", ":", "tests", "[", "test", "]", "[", "\"history\"", "]", ".", "setdefault", "(", "param", ",", "list", "(", ")", ")", ".", "append", "(", "{", "\"branch\"", ":", "branch", ",", "\"commit\"", ":", "commit", ",", "\"metric\"", ":", "metric", ".", "get", "(", "param", ")", ",", "\"data\"", ":", "format_data", "(", "data", ".", "get", "(", "param", ")", ")", ",", "\"result\"", ":", "res", ".", "get", "(", "param", ")", "}", ")", "else", ":", "tests", "[", "test", "]", ".", "setdefault", "(", "\"history\"", ",", "list", "(", ")", ")", ".", "append", "(", "{", "\"branch\"", ":", "branch", ",", "\"commit\"", ":", "commit", ",", "\"metric\"", ":", "metric", ",", "\"data\"", ":", "format_data", "(", "data", ")", ",", "\"result\"", ":", "res", "}", ")", "return", "base" ]
Build the structure of results in terms of a commit history.
[ "Build", "the", "structure", "of", "results", "in", "terms", "of", "a", "commit", "history", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/reporting/history.py#L61-L126
train
Collect the history of the results.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(1178 - 1130) + '\x6f' + '\x33' + chr(0b110100) + chr(2338 - 2283), 18225 - 18217), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110001) + chr(0b10100 + 0o35) + chr(0b1100 + 0o45), 0o10), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(0b1000101 + 0o52) + chr(1662 - 1611) + '\x33' + chr(53), 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\x31' + '\x33' + '\067', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(321 - 267) + chr(0b110100), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(51) + chr(54 - 3) + chr(848 - 796), 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(0b101001 + 0o10) + chr(48) + chr(0b110000), 0b1000), nzTpIcepk0o8('\060' + chr(0b111 + 0o150) + chr(1668 - 1617) + '\x30' + chr(0b110100), 32695 - 32687), nzTpIcepk0o8('\060' + chr(312 - 201) + chr(637 - 588) + chr(0b100111 + 0o14) + '\060', 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(51) + '\x33', 0b1000), nzTpIcepk0o8(chr(0b100011 + 0o15) + chr(0b1101111) + chr(0b110001) + '\061' + chr(487 - 437), 0o10), nzTpIcepk0o8(chr(1357 - 1309) + chr(0b1100101 + 0o12) + '\x32' + chr(1487 - 1432) + chr(0b11100 + 0o32), 56767 - 56759), nzTpIcepk0o8('\x30' + '\157' + chr(2770 - 2717) + chr(0b11001 + 0o33), 50049 - 50041), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\061' + chr(54) + chr(0b110100), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\061' + chr(51) + chr(53), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(55) + chr(52), 0o10), nzTpIcepk0o8('\x30' + chr(0b111 + 0o150) + chr(49) + chr(1814 - 1761) + chr(2068 - 2016), 60921 - 60913), nzTpIcepk0o8('\x30' + chr(0b1101111 + 0o0) + chr(133 - 82) + chr(0b11110 + 0o24), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + '\063' + chr(0b10100 + 0o40) + '\x32', 0o10), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(6203 - 6092) + '\x33' + chr(0b100101 + 0o15) + chr(49), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(4919 - 4808) + '\062' + chr(1236 - 1184) + '\x32', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + '\x33' + chr(1861 - 1813) + chr(0b100001 + 0o24), 19584 - 19576), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(0b1001010 + 0o45) + chr(917 - 865) + chr(53), 0b1000), nzTpIcepk0o8(chr(532 - 484) + chr(8288 - 8177) + '\x33' + '\x30' + chr(0b110010), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1100010 + 0o15) + chr(0b110010) + chr(645 - 593) + chr(0b10011 + 0o41), ord("\x08")), nzTpIcepk0o8('\x30' + chr(380 - 269) + chr(0b110001) + '\x32' + '\x35', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(5434 - 5323) + chr(0b110100) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\063' + chr(54) + chr(0b10110 + 0o40), 0o10), nzTpIcepk0o8(chr(1758 - 1710) + chr(111) + '\063' + chr(0b110101), ord("\x08")), nzTpIcepk0o8(chr(647 - 599) + '\157' + '\x32' + '\065' + chr(608 - 556), 0o10), nzTpIcepk0o8(chr(1610 - 1562) + '\x6f' + chr(0b110001) + '\064' + '\x37', 0o10), nzTpIcepk0o8(chr(48) + chr(5463 - 5352) + chr(0b10 + 0o57) + chr(0b110100) + chr(1901 - 1847), 0o10), nzTpIcepk0o8('\060' + '\157' + '\062' + chr(55) + chr(0b110110), 8), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b100100 + 0o15) + chr(0b101000 + 0o13) + chr(1270 - 1221), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(50) + '\x37' + '\063', ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(49) + '\061' + chr(0b110010), 8), nzTpIcepk0o8('\x30' + chr(0b1101000 + 0o7) + chr(54) + '\064', 8), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(50) + chr(0b110111) + chr(0b110100), 0o10), nzTpIcepk0o8('\x30' + chr(0b100001 + 0o116) + chr(49) + chr(0b101011 + 0o10) + '\x33', 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(49) + chr(816 - 761) + chr(0b110110), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x35' + '\060', 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xc9'), chr(0b1100100) + chr(2886 - 2785) + '\143' + '\157' + chr(0b1100100) + chr(3415 - 3314))(chr(0b1101111 + 0o6) + chr(2700 - 2584) + chr(0b101100 + 0o72) + chr(0b10100 + 0o31) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def _s9A9DzBLIHD(hXMPsSrOQzbh): def r0t8yr2lxmFR(FfKOThdpoDTb): if MJ07XsN5uFgW == roI3spqORKae(ES5oEprVxulp(b'\x97,\xaf<Q\xb24'), chr(100) + chr(0b11011 + 0o112) + chr(99) + chr(0b1101011 + 0o4) + chr(0b1100100) + chr(0b1011101 + 0o10))(chr(0b1110101) + chr(116) + '\146' + chr(0b101101) + chr(0b111000)) or FfKOThdpoDTb is None: return [] if MJ07XsN5uFgW == roI3spqORKae(ES5oEprVxulp(b'\x84&\xa81@'), chr(673 - 573) + '\145' + '\143' + '\157' + chr(5045 - 4945) + chr(8602 - 8501))('\165' + chr(0b101101 + 0o107) + chr(102) + '\055' + chr(3136 - 3080)): return ftfygxgFas5X(FfKOThdpoDTb) return FfKOThdpoDTb xvptlew7LsBo = znjnJWK64FDT() JAxaJeZALw_t = xvptlew7LsBo.ze0JMuK9roWS(roI3spqORKae(ES5oEprVxulp(b'\x93,\xae+G'), chr(5872 - 5772) + chr(0b11001 + 0o114) + chr(4634 - 4535) + chr(0b1011101 + 0o22) + chr(100) + chr(8958 - 8857))('\165' + chr(12287 - 12171) + chr(0b0 + 0o146) + '\x2d' + chr(0b111000)), znjnJWK64FDT()) CLmnnuotoMDU = xvptlew7LsBo.ze0JMuK9roWS(roI3spqORKae(ES5oEprVxulp(b'\x94*\xb2-Q'), chr(2930 - 2830) + chr(0b11 + 0o142) + chr(4774 - 4675) + '\157' + chr(8325 - 8225) + chr(4033 - 3932))(chr(117) + '\x74' + '\146' + chr(0b101101) + '\070'), znjnJWK64FDT()) XpuW1pQXMX0E = CLmnnuotoMDU.ze0JMuK9roWS(roI3spqORKae(ES5oEprVxulp(b'\x93&\xa9>X\x833\xa77i/'), chr(0b1010010 + 0o22) + chr(101) + '\x63' + chr(0b100101 + 0o112) + chr(100) + chr(101))(chr(117) + chr(0b1110100) + chr(0b1010 + 0o134) + '\055' + chr(0b111000)), znjnJWK64FDT()) for (LN9bTY8xm1lt, dg9GdsJOXzDc) in roI3spqORKae(hXMPsSrOQzbh._history, roI3spqORKae(ES5oEprVxulp(b'\x8e=\xb8-k\xbe2\xa56x"\xdb_'), chr(0b101011 + 0o71) + chr(101) + '\x63' + chr(0b1101111) + chr(100) + chr(101))('\165' + '\164' + '\x66' + chr(0b1111 + 0o36) + '\070'))(): for An6zT8UjKIsO in DoS4vLAglV8A(dg9GdsJOXzDc): POx95m7SPOVy = hXMPsSrOQzbh.POx95m7SPOVy = hXMPsSrOQzbh._history.tS9p5_ZAQIfy(An6zT8UjKIsO) roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\x84&\xb0/A\xa8%\x9b+x%\xccI'), chr(100) + chr(0b1001110 + 0o27) + chr(0b1010111 + 0o14) + chr(111) + '\144' + '\x65')('\165' + chr(11602 - 11486) + chr(0b1100110) + chr(45) + chr(0b111000)))() QuOZYPM5d8jj = hXMPsSrOQzbh.POx95m7SPOVy[roI3spqORKae(ES5oEprVxulp(b'\x94*\xb2-Q'), chr(100) + chr(8463 - 8362) + chr(99) + '\157' + '\x64' + chr(101))(chr(0b1110101) + chr(116) + '\146' + chr(0b11101 + 0o20) + chr(0b10001 + 0o47))][roI3spqORKae(ES5oEprVxulp(b'\x93&\xa9>X\x833\xa77i/'), '\144' + chr(8195 - 8094) + chr(99) + '\x6f' + chr(0b1000110 + 0o36) + chr(0b1011110 + 0o7))(chr(0b1110101) + chr(0b1001111 + 0o45) + '\x66' + chr(0b101101) + chr(1597 - 1541))] roI3spqORKae(XpuW1pQXMX0E, roI3spqORKae(ES5oEprVxulp(b'\x9d,\xed\x15y\xa9\x0b\xfd*t\x1d\xed'), '\144' + '\x65' + chr(0b110000 + 0o63) + chr(111) + chr(0b1010100 + 0o20) + '\x65')(chr(4041 - 3924) + chr(0b1110100) + '\x66' + chr(0b101101) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'\x8f \xae+[\xae9'), chr(0b1100100) + chr(9878 - 9777) + chr(8825 - 8726) + '\157' + chr(3362 - 3262) + chr(101))('\x75' + chr(0b101 + 0o157) + '\146' + chr(179 - 134) + '\x38'), H4NoA26ON7iG()) XpuW1pQXMX0E[roI3spqORKae(ES5oEprVxulp(b'\x81&\xaf2U\xa8\x1f\xb0!k/'), '\x64' + chr(0b10001 + 0o124) + chr(0b1101 + 0o126) + chr(10043 - 9932) + chr(0b111111 + 0o45) + chr(8502 - 8401))('\x75' + '\x74' + '\146' + chr(0b101101) + chr(2464 - 2408))] = roI3spqORKae(ES5oEprVxulp(b'\x94*\xb2-Q'), chr(100) + chr(0b1100101) + chr(99) + '\157' + '\144' + '\145')('\165' + chr(0b1110100) + '\x66' + chr(45) + chr(56)) roI3spqORKae(XpuW1pQXMX0E[roI3spqORKae(ES5oEprVxulp(b'\x8f \xae+[\xae9'), chr(0b1100100) + chr(0b1100101) + chr(99) + chr(0b1101111) + '\x64' + chr(101))(chr(117) + '\164' + chr(0b1100110) + chr(76 - 31) + chr(2405 - 2349))], roI3spqORKae(ES5oEprVxulp(b'\xaf\x1d\x8ekL\xbb\x07\xab2t\x1f\x8b'), '\x64' + chr(2619 - 2518) + '\143' + chr(111) + chr(1143 - 1043) + chr(101))(chr(7331 - 7214) + '\164' + chr(10273 - 10171) + chr(955 - 910) + chr(2333 - 2277)))({roI3spqORKae(ES5oEprVxulp(b'\x85;\xbc1W\xb4'), '\144' + '\145' + chr(0b1100011) + chr(0b1101111) + '\144' + '\145')(chr(0b110010 + 0o103) + chr(0b1110100) + chr(2234 - 2132) + '\x2d' + chr(56)): LN9bTY8xm1lt, roI3spqORKae(ES5oEprVxulp(b'\x84&\xb02]\xa8'), chr(0b111001 + 0o53) + '\x65' + chr(99) + chr(3958 - 3847) + chr(0b1100100) + '\145')(chr(0b1110101) + chr(0b1110100) + chr(102) + chr(499 - 454) + '\x38'): An6zT8UjKIsO, roI3spqORKae(ES5oEprVxulp(b'\x8a,\xa9-]\xbf'), '\x64' + chr(1511 - 1410) + chr(1826 - 1727) + chr(0b1101111) + chr(0b1100100) + chr(0b10110 + 0o117))(chr(0b1110101) + chr(13142 - 13026) + chr(0b1100110) + chr(45) + chr(0b110000 + 0o10)): QuOZYPM5d8jj}) for lGTavdCofTYw in roI3spqORKae(POx95m7SPOVy, roI3spqORKae(ES5oEprVxulp(b'\x84(\xae:G'), chr(5521 - 5421) + chr(0b1100101) + chr(0b1100001 + 0o2) + chr(0b1101111) + '\144' + '\x65')(chr(117) + chr(0b1110100) + '\x66' + chr(45) + chr(917 - 861))): roI3spqORKae(JAxaJeZALw_t, roI3spqORKae(ES5oEprVxulp(b'\x9d,\xed\x15y\xa9\x0b\xfd*t\x1d\xed'), chr(5738 - 5638) + '\145' + chr(3720 - 3621) + '\x6f' + chr(0b1100100) + chr(101))('\165' + chr(0b11010 + 0o132) + '\x66' + chr(0b100010 + 0o13) + chr(56)))(lGTavdCofTYw, znjnJWK64FDT()) if roI3spqORKae(ES5oEprVxulp(b'\x93 \xa93Q'), '\x64' + chr(3612 - 3511) + '\x63' + '\157' + chr(0b0 + 0o144) + chr(101))('\165' + chr(0b1110100) + chr(0b1100110) + chr(0b10100 + 0o31) + chr(0b111000)) not in JAxaJeZALw_t[lGTavdCofTYw]: JAxaJeZALw_t[lGTavdCofTYw][roI3spqORKae(ES5oEprVxulp(b'\x93 \xa93Q'), chr(6400 - 6300) + '\145' + chr(0b1100011) + chr(0b11100 + 0o123) + chr(0b1100100) + chr(8611 - 8510))(chr(13443 - 13326) + chr(0b1110100) + '\146' + '\055' + chr(56))] = POx95m7SPOVy.cases[lGTavdCofTYw][roI3spqORKae(ES5oEprVxulp(b'\x93 \xa93Q'), chr(0b1100100) + chr(1478 - 1377) + chr(0b1010000 + 0o23) + chr(5615 - 5504) + chr(0b1100100) + chr(2806 - 2705))('\165' + chr(116) + chr(10060 - 9958) + chr(1702 - 1657) + chr(56))] if roI3spqORKae(ES5oEprVxulp(b'\x94<\xb02U\xae9'), chr(0b1100100) + chr(5886 - 5785) + chr(0b1100011) + chr(111) + chr(100) + chr(634 - 533))('\165' + chr(4900 - 4784) + chr(0b11101 + 0o111) + chr(45) + chr(109 - 53)) not in JAxaJeZALw_t[lGTavdCofTYw]: JAxaJeZALw_t[lGTavdCofTYw][roI3spqORKae(ES5oEprVxulp(b'\x94<\xb02U\xae9'), chr(0b1100100) + '\x65' + '\x63' + chr(8600 - 8489) + '\x64' + chr(0b100101 + 0o100))(chr(117) + '\164' + chr(102) + '\x2d' + chr(0b111000))] = POx95m7SPOVy.cases[lGTavdCofTYw][roI3spqORKae(ES5oEprVxulp(b'\x94<\xb02U\xae9'), chr(0b101101 + 0o67) + chr(0b1100101) + chr(0b100100 + 0o77) + '\157' + '\x64' + chr(0b110 + 0o137))('\x75' + chr(179 - 63) + '\x66' + chr(0b10011 + 0o32) + '\070')] if roI3spqORKae(ES5oEprVxulp(b'\x930\xad:'), '\144' + '\145' + chr(7666 - 7567) + chr(0b1101111) + '\x64' + chr(101))(chr(117) + chr(0b1101111 + 0o5) + '\x66' + chr(1718 - 1673) + chr(2871 - 2815)) not in JAxaJeZALw_t[lGTavdCofTYw]: JAxaJeZALw_t[lGTavdCofTYw][roI3spqORKae(ES5oEprVxulp(b'\x81&\xaf2U\xa8\x1f\xb0!k/'), chr(0b1100100) + '\x65' + chr(0b111110 + 0o45) + '\x6f' + chr(0b1010 + 0o132) + '\145')('\165' + '\164' + chr(0b1100110) + '\x2d' + chr(56))] = POx95m7SPOVy.cases[lGTavdCofTYw][roI3spqORKae(ES5oEprVxulp(b'\x81&\xaf2U\xa8\x1f\xb0!k/'), chr(0b110011 + 0o61) + chr(0b100110 + 0o77) + '\143' + chr(0b110 + 0o151) + chr(1544 - 1444) + '\x65')('\x75' + '\x74' + chr(102) + chr(45) + chr(2091 - 2035))] MJ07XsN5uFgW = JAxaJeZALw_t[lGTavdCofTYw][roI3spqORKae(ES5oEprVxulp(b'\x81&\xaf2U\xa8\x1f\xb0!k/'), chr(0b1100100) + chr(7744 - 7643) + '\x63' + chr(0b1001111 + 0o40) + chr(2931 - 2831) + chr(101))(chr(0b1110101) + '\164' + chr(0b1000100 + 0o42) + chr(0b101101) + chr(0b111000))] ZXcxKHlxi_pV = POx95m7SPOVy.cases[lGTavdCofTYw].GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b'\x8a,\xa9-]\xbf'), '\144' + '\x65' + '\143' + chr(111) + chr(6897 - 6797) + chr(0b11110 + 0o107))(chr(10341 - 10224) + '\x74' + chr(9407 - 9305) + chr(45) + '\070')) FfKOThdpoDTb = POx95m7SPOVy.cases[lGTavdCofTYw].GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b'\x83(\xa9>'), chr(0b1100100) + '\x65' + chr(99) + chr(0b1101111) + chr(0b1001011 + 0o31) + chr(0b1011100 + 0o11))(chr(0b1110101) + chr(2013 - 1897) + chr(4770 - 4668) + chr(321 - 276) + chr(0b111000))) _XdQFJpnzJor = POx95m7SPOVy.cases[lGTavdCofTYw].GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b'\x95,\xae*X\xa8'), chr(0b110111 + 0o55) + '\x65' + chr(0b1100011) + chr(0b1101111) + '\x64' + chr(0b1100101))(chr(0b1110101) + chr(6737 - 6621) + chr(0b111011 + 0o53) + '\x2d' + chr(2331 - 2275))) if suIjIS24Zkqw(ZXcxKHlxi_pV, znjnJWK64FDT): roI3spqORKae(JAxaJeZALw_t[lGTavdCofTYw], roI3spqORKae(ES5oEprVxulp(b'\x9d,\xed\x15y\xa9\x0b\xfd*t\x1d\xed'), '\x64' + chr(0b111001 + 0o54) + '\143' + chr(0b1101111) + '\x64' + chr(101))(chr(0b1110101) + chr(0b1110100) + '\x66' + chr(480 - 435) + chr(1045 - 989)))(roI3spqORKae(ES5oEprVxulp(b'\x8f \xae+[\xae9'), chr(100) + chr(0b1000101 + 0o40) + chr(99) + chr(111) + chr(7958 - 7858) + chr(0b1100101))(chr(0b1110101) + chr(1228 - 1112) + chr(0b111100 + 0o52) + chr(0b11011 + 0o22) + chr(56)), znjnJWK64FDT()) for BDr7SxpOFXwl in ZXcxKHlxi_pV: roI3spqORKae(JAxaJeZALw_t[lGTavdCofTYw][roI3spqORKae(ES5oEprVxulp(b'\x8f \xae+[\xae9'), '\x64' + '\145' + chr(99) + chr(0b1011001 + 0o26) + chr(0b111001 + 0o53) + chr(0b1100101))(chr(458 - 341) + '\164' + '\146' + '\x2d' + chr(0b111000))].setdefault(BDr7SxpOFXwl, H4NoA26ON7iG()), roI3spqORKae(ES5oEprVxulp(b'\xaf\x1d\x8ekL\xbb\x07\xab2t\x1f\x8b'), '\144' + '\x65' + chr(0b1100011) + '\x6f' + chr(100) + '\145')(chr(5564 - 5447) + chr(0b1000111 + 0o55) + chr(8451 - 8349) + '\x2d' + chr(0b111000)))({roI3spqORKae(ES5oEprVxulp(b'\x85;\xbc1W\xb4'), '\x64' + '\145' + '\x63' + chr(111) + '\144' + chr(101))(chr(10712 - 10595) + chr(0b110101 + 0o77) + '\146' + chr(0b100000 + 0o15) + chr(1492 - 1436)): LN9bTY8xm1lt, roI3spqORKae(ES5oEprVxulp(b'\x84&\xb02]\xa8'), '\144' + chr(0b1100101) + '\143' + chr(0b1101111) + chr(0b1011010 + 0o12) + chr(0b1100101))(chr(0b1110101) + chr(0b1001101 + 0o47) + chr(102) + '\055' + chr(56)): An6zT8UjKIsO, roI3spqORKae(ES5oEprVxulp(b'\x8a,\xa9-]\xbf'), chr(0b1100100) + '\x65' + chr(99) + chr(0b1101111) + chr(0b110000 + 0o64) + chr(101))(chr(0b1110101) + chr(1763 - 1647) + chr(0b1011101 + 0o11) + chr(0b101101) + '\x38'): roI3spqORKae(ZXcxKHlxi_pV, roI3spqORKae(ES5oEprVxulp(b'\xa0\x1c\x96:@\xa9t\xbc9\\9\xf4'), chr(0b10011 + 0o121) + '\145' + chr(5477 - 5378) + chr(0b1101111) + chr(100) + chr(101))(chr(0b11010 + 0o133) + chr(116) + chr(102) + chr(0b101101) + chr(0b111000)))(BDr7SxpOFXwl), roI3spqORKae(ES5oEprVxulp(b'\x83(\xa9>'), chr(2068 - 1968) + '\x65' + '\143' + '\157' + '\144' + '\x65')(chr(117) + chr(6065 - 5949) + chr(0b101010 + 0o74) + chr(0b101101) + chr(0b110011 + 0o5)): r0t8yr2lxmFR(roI3spqORKae(FfKOThdpoDTb, roI3spqORKae(ES5oEprVxulp(b'\xa0\x1c\x96:@\xa9t\xbc9\\9\xf4'), chr(9593 - 9493) + chr(101) + chr(9699 - 9600) + chr(0b110111 + 0o70) + chr(0b1100100) + chr(0b1100101))('\x75' + '\x74' + chr(0b1100110) + chr(0b1100 + 0o41) + '\070'))(BDr7SxpOFXwl)), roI3spqORKae(ES5oEprVxulp(b'\x95,\xae*X\xa8'), chr(0b100011 + 0o101) + chr(0b1100101) + chr(0b100110 + 0o75) + chr(2620 - 2509) + '\x64' + chr(5928 - 5827))(chr(0b1110101) + '\x74' + chr(3768 - 3666) + '\x2d' + chr(56)): roI3spqORKae(_XdQFJpnzJor, roI3spqORKae(ES5oEprVxulp(b'\xa0\x1c\x96:@\xa9t\xbc9\\9\xf4'), chr(100) + chr(6847 - 6746) + '\x63' + '\157' + '\x64' + chr(0b1010000 + 0o25))(chr(0b1110101) + chr(0b100001 + 0o123) + '\x66' + '\x2d' + chr(0b111000)))(BDr7SxpOFXwl)}) else: roI3spqORKae(JAxaJeZALw_t[lGTavdCofTYw].setdefault(roI3spqORKae(ES5oEprVxulp(b'\x8f \xae+[\xae9'), chr(0b1100100) + chr(101) + chr(4217 - 4118) + chr(0b1101111) + chr(7552 - 7452) + chr(0b1100101))('\165' + chr(0b1110010 + 0o2) + '\146' + '\055' + chr(56)), H4NoA26ON7iG()), roI3spqORKae(ES5oEprVxulp(b'\xaf\x1d\x8ekL\xbb\x07\xab2t\x1f\x8b'), chr(100) + '\x65' + '\x63' + chr(0b1101111) + '\144' + chr(0b110011 + 0o62))(chr(117) + chr(0b1110100) + chr(0b1010000 + 0o26) + chr(0b101101) + chr(2175 - 2119)))({roI3spqORKae(ES5oEprVxulp(b'\x85;\xbc1W\xb4'), chr(6021 - 5921) + '\145' + chr(0b1100011) + chr(111) + '\144' + chr(101))('\165' + chr(0b1110100) + chr(2875 - 2773) + chr(0b101101) + '\x38'): LN9bTY8xm1lt, roI3spqORKae(ES5oEprVxulp(b'\x84&\xb02]\xa8'), '\144' + chr(0b1100101) + '\x63' + chr(0b1101111) + chr(100) + '\145')('\165' + chr(0b1011110 + 0o26) + '\146' + chr(0b101001 + 0o4) + chr(624 - 568)): An6zT8UjKIsO, roI3spqORKae(ES5oEprVxulp(b'\x8a,\xa9-]\xbf'), '\x64' + chr(0b1100101) + chr(0b11111 + 0o104) + chr(111) + chr(100) + chr(4878 - 4777))(chr(117) + chr(116) + chr(0b101000 + 0o76) + chr(0b101101) + '\x38'): ZXcxKHlxi_pV, roI3spqORKae(ES5oEprVxulp(b'\x83(\xa9>'), chr(100) + chr(101) + '\143' + chr(111) + chr(100) + chr(7847 - 7746))(chr(10161 - 10044) + '\164' + '\x66' + '\x2d' + chr(1252 - 1196)): r0t8yr2lxmFR(FfKOThdpoDTb), roI3spqORKae(ES5oEprVxulp(b'\x95,\xae*X\xa8'), chr(0b10111 + 0o115) + chr(101) + chr(99) + chr(0b1101111) + '\144' + chr(101))(chr(9894 - 9777) + chr(116) + chr(0b101101 + 0o71) + '\x2d' + chr(0b100101 + 0o23)): _XdQFJpnzJor}) return xvptlew7LsBo
opencobra/memote
memote/suite/reporting/diff.py
DiffReport.format_and_score_diff_data
def format_and_score_diff_data(self, diff_results): """Reformat the api results to work with the front-end.""" base = dict() meta = base.setdefault('meta', dict()) tests = base.setdefault('tests', dict()) score = base.setdefault('score', dict()) for model_filename, result in iteritems(diff_results): if meta == dict(): meta = result["meta"] for test_id, test_results in iteritems(result["tests"]): tests.setdefault(test_id, dict()) if tests[test_id] == dict(): tests[test_id]["summary"] = test_results["summary"] tests[test_id]["title"] = test_results["title"] tests[test_id]["format_type"] = test_results["format_type"] if isinstance(test_results["metric"], dict): tests[test_id].setdefault("diff", dict()) for param in test_results["metric"]: tests[test_id]["diff"].setdefault(param, list()). \ append({ "model": model_filename, "data": test_results["data"].setdefault(param), "duration": test_results["duration"].setdefault(param), "message": test_results["message"].setdefault(param), "metric": test_results["metric"].setdefault(param), "result": test_results["result"].setdefault(param)}) else: tests[test_id].setdefault("diff", list()) tests[test_id]["diff"].append({ "model": model_filename, "data": test_results.setdefault("data"), "duration": test_results.setdefault("duration"), "message": test_results.setdefault("message"), "metric": test_results.setdefault("metric"), "result": test_results.setdefault("result")}) self.result = result self.compute_score() score.setdefault('total_score', dict()).setdefault('diff', list()) score.setdefault('sections', dict()).setdefault('diff', list()) score['total_score']['diff'].append({ "model": model_filename, "total_score": self.result['score']['total_score']}) for section in self.result['score']['sections']: section.update({"model": model_filename}) score['sections']['diff'].append(section) return base
python
def format_and_score_diff_data(self, diff_results): """Reformat the api results to work with the front-end.""" base = dict() meta = base.setdefault('meta', dict()) tests = base.setdefault('tests', dict()) score = base.setdefault('score', dict()) for model_filename, result in iteritems(diff_results): if meta == dict(): meta = result["meta"] for test_id, test_results in iteritems(result["tests"]): tests.setdefault(test_id, dict()) if tests[test_id] == dict(): tests[test_id]["summary"] = test_results["summary"] tests[test_id]["title"] = test_results["title"] tests[test_id]["format_type"] = test_results["format_type"] if isinstance(test_results["metric"], dict): tests[test_id].setdefault("diff", dict()) for param in test_results["metric"]: tests[test_id]["diff"].setdefault(param, list()). \ append({ "model": model_filename, "data": test_results["data"].setdefault(param), "duration": test_results["duration"].setdefault(param), "message": test_results["message"].setdefault(param), "metric": test_results["metric"].setdefault(param), "result": test_results["result"].setdefault(param)}) else: tests[test_id].setdefault("diff", list()) tests[test_id]["diff"].append({ "model": model_filename, "data": test_results.setdefault("data"), "duration": test_results.setdefault("duration"), "message": test_results.setdefault("message"), "metric": test_results.setdefault("metric"), "result": test_results.setdefault("result")}) self.result = result self.compute_score() score.setdefault('total_score', dict()).setdefault('diff', list()) score.setdefault('sections', dict()).setdefault('diff', list()) score['total_score']['diff'].append({ "model": model_filename, "total_score": self.result['score']['total_score']}) for section in self.result['score']['sections']: section.update({"model": model_filename}) score['sections']['diff'].append(section) return base
[ "def", "format_and_score_diff_data", "(", "self", ",", "diff_results", ")", ":", "base", "=", "dict", "(", ")", "meta", "=", "base", ".", "setdefault", "(", "'meta'", ",", "dict", "(", ")", ")", "tests", "=", "base", ".", "setdefault", "(", "'tests'", ",", "dict", "(", ")", ")", "score", "=", "base", ".", "setdefault", "(", "'score'", ",", "dict", "(", ")", ")", "for", "model_filename", ",", "result", "in", "iteritems", "(", "diff_results", ")", ":", "if", "meta", "==", "dict", "(", ")", ":", "meta", "=", "result", "[", "\"meta\"", "]", "for", "test_id", ",", "test_results", "in", "iteritems", "(", "result", "[", "\"tests\"", "]", ")", ":", "tests", ".", "setdefault", "(", "test_id", ",", "dict", "(", ")", ")", "if", "tests", "[", "test_id", "]", "==", "dict", "(", ")", ":", "tests", "[", "test_id", "]", "[", "\"summary\"", "]", "=", "test_results", "[", "\"summary\"", "]", "tests", "[", "test_id", "]", "[", "\"title\"", "]", "=", "test_results", "[", "\"title\"", "]", "tests", "[", "test_id", "]", "[", "\"format_type\"", "]", "=", "test_results", "[", "\"format_type\"", "]", "if", "isinstance", "(", "test_results", "[", "\"metric\"", "]", ",", "dict", ")", ":", "tests", "[", "test_id", "]", ".", "setdefault", "(", "\"diff\"", ",", "dict", "(", ")", ")", "for", "param", "in", "test_results", "[", "\"metric\"", "]", ":", "tests", "[", "test_id", "]", "[", "\"diff\"", "]", ".", "setdefault", "(", "param", ",", "list", "(", ")", ")", ".", "append", "(", "{", "\"model\"", ":", "model_filename", ",", "\"data\"", ":", "test_results", "[", "\"data\"", "]", ".", "setdefault", "(", "param", ")", ",", "\"duration\"", ":", "test_results", "[", "\"duration\"", "]", ".", "setdefault", "(", "param", ")", ",", "\"message\"", ":", "test_results", "[", "\"message\"", "]", ".", "setdefault", "(", "param", ")", ",", "\"metric\"", ":", "test_results", "[", "\"metric\"", "]", ".", "setdefault", "(", "param", ")", ",", "\"result\"", ":", "test_results", "[", "\"result\"", "]", ".", "setdefault", "(", "param", ")", "}", ")", "else", ":", "tests", "[", "test_id", "]", ".", "setdefault", "(", "\"diff\"", ",", "list", "(", ")", ")", "tests", "[", "test_id", "]", "[", "\"diff\"", "]", ".", "append", "(", "{", "\"model\"", ":", "model_filename", ",", "\"data\"", ":", "test_results", ".", "setdefault", "(", "\"data\"", ")", ",", "\"duration\"", ":", "test_results", ".", "setdefault", "(", "\"duration\"", ")", ",", "\"message\"", ":", "test_results", ".", "setdefault", "(", "\"message\"", ")", ",", "\"metric\"", ":", "test_results", ".", "setdefault", "(", "\"metric\"", ")", ",", "\"result\"", ":", "test_results", ".", "setdefault", "(", "\"result\"", ")", "}", ")", "self", ".", "result", "=", "result", "self", ".", "compute_score", "(", ")", "score", ".", "setdefault", "(", "'total_score'", ",", "dict", "(", ")", ")", ".", "setdefault", "(", "'diff'", ",", "list", "(", ")", ")", "score", ".", "setdefault", "(", "'sections'", ",", "dict", "(", ")", ")", ".", "setdefault", "(", "'diff'", ",", "list", "(", ")", ")", "score", "[", "'total_score'", "]", "[", "'diff'", "]", ".", "append", "(", "{", "\"model\"", ":", "model_filename", ",", "\"total_score\"", ":", "self", ".", "result", "[", "'score'", "]", "[", "'total_score'", "]", "}", ")", "for", "section", "in", "self", ".", "result", "[", "'score'", "]", "[", "'sections'", "]", ":", "section", ".", "update", "(", "{", "\"model\"", ":", "model_filename", "}", ")", "score", "[", "'sections'", "]", "[", "'diff'", "]", ".", "append", "(", "section", ")", "return", "base" ]
Reformat the api results to work with the front-end.
[ "Reformat", "the", "api", "results", "to", "work", "with", "the", "front", "-", "end", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/reporting/diff.py#L48-L97
train
Reformat the api results to work with the front - end.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + '\157' + '\x31' + chr(0b11110 + 0o25) + chr(359 - 304), 0o10), nzTpIcepk0o8(chr(48) + chr(1079 - 968) + chr(0b11111 + 0o24) + chr(53) + '\x35', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\064' + '\x33', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(8885 - 8774) + chr(326 - 275) + '\x34' + chr(0b100111 + 0o17), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110011) + '\x37' + chr(0b11011 + 0o26), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(54) + '\x31', 50035 - 50027), nzTpIcepk0o8(chr(1323 - 1275) + chr(111) + chr(0b101 + 0o55) + chr(738 - 688) + chr(0b100000 + 0o20), 0o10), nzTpIcepk0o8('\x30' + chr(8824 - 8713) + '\062' + chr(0b110101) + '\060', ord("\x08")), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(111) + chr(2115 - 2065) + chr(50) + '\063', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(2068 - 2017) + chr(54) + chr(0b101101 + 0o10), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1011 + 0o144) + chr(0b100001 + 0o20) + '\x34' + chr(2960 - 2905), 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + chr(2095 - 2040) + chr(0b11100 + 0o30), 49866 - 49858), nzTpIcepk0o8(chr(1880 - 1832) + chr(0b1101111) + chr(0b10110 + 0o34) + chr(2081 - 2029) + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + '\062' + '\x36' + chr(2775 - 2721), ord("\x08")), nzTpIcepk0o8(chr(1277 - 1229) + '\x6f' + '\x33' + chr(0b100001 + 0o21) + chr(920 - 870), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(0b10 + 0o60) + chr(0b110111) + chr(0b101001 + 0o13), 0o10), nzTpIcepk0o8(chr(2129 - 2081) + '\157' + '\067' + chr(0b110101), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(1751 - 1701) + chr(1295 - 1242) + '\x37', 47198 - 47190), nzTpIcepk0o8(chr(0b101011 + 0o5) + chr(0b1101111) + '\x32' + chr(0b100 + 0o61) + '\063', 9900 - 9892), nzTpIcepk0o8('\060' + '\157' + '\067' + '\x36', 0o10), nzTpIcepk0o8('\x30' + chr(6112 - 6001) + '\x31' + chr(1718 - 1666) + chr(0b110010), 32344 - 32336), nzTpIcepk0o8(chr(0b10101 + 0o33) + chr(111) + '\063' + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(0b101010 + 0o6) + chr(0b1001110 + 0o41) + chr(0b10010 + 0o37) + '\066' + '\x33', 0b1000), nzTpIcepk0o8(chr(0b100 + 0o54) + chr(111) + '\061' + chr(52) + chr(0b100110 + 0o14), 8), nzTpIcepk0o8(chr(506 - 458) + chr(0b101101 + 0o102) + chr(49) + chr(53) + '\x36', 47016 - 47008), nzTpIcepk0o8('\x30' + chr(111) + chr(2558 - 2507) + chr(54) + '\x30', 0o10), nzTpIcepk0o8('\x30' + chr(0b101011 + 0o104) + '\064' + chr(1599 - 1550), 0b1000), nzTpIcepk0o8('\060' + chr(7050 - 6939) + '\061' + chr(54) + '\063', 8), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110001) + chr(0b110001) + chr(0b11101 + 0o24), 12339 - 12331), nzTpIcepk0o8(chr(601 - 553) + '\x6f' + '\x31' + chr(0b110000) + '\060', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(9951 - 9840) + chr(0b101101 + 0o5) + chr(49) + chr(0b1000 + 0o50), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + '\x32' + chr(1284 - 1229) + chr(51), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(3291 - 3180) + '\063' + chr(0b110111) + chr(0b110101), 0o10), nzTpIcepk0o8(chr(661 - 613) + chr(3584 - 3473) + '\062' + '\065' + chr(505 - 452), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\062' + chr(51), 25824 - 25816), nzTpIcepk0o8('\x30' + chr(0b110010 + 0o75) + chr(0b110010) + '\061' + chr(0b1001 + 0o56), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110011) + '\064' + '\065', 26277 - 26269), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110010) + chr(0b11011 + 0o30), 8), nzTpIcepk0o8(chr(0b1111 + 0o41) + '\157' + chr(0b110001) + '\x36' + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(48) + chr(11866 - 11755) + chr(0b1 + 0o62) + '\066' + chr(0b110101), 8)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + chr(11881 - 11770) + chr(0b11000 + 0o35) + '\060', 60167 - 60159)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'q'), chr(4020 - 3920) + '\145' + chr(99) + '\x6f' + chr(100) + chr(101))('\x75' + '\164' + '\x66' + chr(702 - 657) + chr(0b100101 + 0o23)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def AlIwqIYISQRj(hXMPsSrOQzbh, PxlPTs9P0k3c): xvptlew7LsBo = znjnJWK64FDT() DCKHhI6xLX9g = xvptlew7LsBo.ze0JMuK9roWS(roI3spqORKae(ES5oEprVxulp(b'2\x88W\x87'), '\144' + chr(0b1100101) + '\143' + chr(9605 - 9494) + chr(5583 - 5483) + chr(0b1100101))(chr(0b1110101) + '\x74' + chr(102) + chr(0b0 + 0o55) + chr(0b111000)), znjnJWK64FDT()) JAxaJeZALw_t = xvptlew7LsBo.ze0JMuK9roWS(roI3spqORKae(ES5oEprVxulp(b'+\x88P\x92\x8a'), '\x64' + chr(0b1100101) + '\143' + '\x6f' + '\144' + chr(101))(chr(117) + chr(7112 - 6996) + chr(0b1010000 + 0o26) + '\055' + chr(56)), znjnJWK64FDT()) CLmnnuotoMDU = xvptlew7LsBo.ze0JMuK9roWS(roI3spqORKae(ES5oEprVxulp(b',\x8eL\x94\x9c'), '\144' + chr(0b1100101) + chr(0b1100011) + chr(0b1101111) + '\x64' + chr(6935 - 6834))('\x75' + '\164' + chr(102) + chr(45) + chr(1955 - 1899)), znjnJWK64FDT()) for (mzBqnYWciVVa, POx95m7SPOVy) in tcSkjcrLksk1(PxlPTs9P0k3c): if DCKHhI6xLX9g == znjnJWK64FDT(): DCKHhI6xLX9g = POx95m7SPOVy[roI3spqORKae(ES5oEprVxulp(b'2\x88W\x87'), chr(255 - 155) + chr(0b1110 + 0o127) + '\x63' + chr(0b1101111) + '\144' + chr(0b1100101))(chr(0b1110101) + chr(0b1110100) + chr(102) + chr(0b1011 + 0o42) + '\x38')] for (qOaisbPnJ3WC, pRO1vq2CdDrs) in tcSkjcrLksk1(POx95m7SPOVy[roI3spqORKae(ES5oEprVxulp(b'+\x88P\x92\x8a'), chr(0b1010100 + 0o20) + chr(9924 - 9823) + chr(0b1100011) + chr(0b1101111) + chr(100) + chr(0b1100011 + 0o2))(chr(0b1110101) + chr(116) + chr(102) + chr(85 - 40) + '\070')]): roI3spqORKae(JAxaJeZALw_t, roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), '\144' + '\145' + chr(0b1101 + 0o126) + chr(0b110 + 0o151) + chr(100) + chr(2848 - 2747))('\165' + chr(0b1110100) + chr(0b10110 + 0o120) + '\x2d' + '\x38'))(qOaisbPnJ3WC, znjnJWK64FDT()) if JAxaJeZALw_t[qOaisbPnJ3WC] == znjnJWK64FDT(): JAxaJeZALw_t[qOaisbPnJ3WC][roI3spqORKae(ES5oEprVxulp(b',\x98N\x8b\x98C\xe9'), chr(8187 - 8087) + chr(0b1001000 + 0o35) + '\143' + '\157' + chr(0b1100100) + chr(0b111110 + 0o47))('\165' + chr(1077 - 961) + chr(102) + chr(0b101101) + chr(56))] = pRO1vq2CdDrs[roI3spqORKae(ES5oEprVxulp(b',\x98N\x8b\x98C\xe9'), chr(0b1100100) + chr(101) + chr(99) + chr(10607 - 10496) + chr(100) + '\145')(chr(0b1100110 + 0o17) + chr(0b1110100) + '\x66' + chr(0b11101 + 0o20) + '\070')] JAxaJeZALw_t[qOaisbPnJ3WC][roI3spqORKae(ES5oEprVxulp(b'+\x84W\x8a\x9c'), chr(2747 - 2647) + chr(0b1001100 + 0o31) + chr(0b110110 + 0o55) + '\157' + '\144' + chr(243 - 142))('\165' + chr(0b1101 + 0o147) + '\x66' + chr(1854 - 1809) + chr(0b101000 + 0o20))] = pRO1vq2CdDrs[roI3spqORKae(ES5oEprVxulp(b'+\x84W\x8a\x9c'), chr(0b11111 + 0o105) + '\x65' + chr(0b1000110 + 0o35) + chr(9099 - 8988) + chr(0b1100100) + '\x65')(chr(0b1110101) + chr(0b100011 + 0o121) + '\x66' + '\x2d' + chr(0b110101 + 0o3))] JAxaJeZALw_t[qOaisbPnJ3WC][roI3spqORKae(ES5oEprVxulp(b'9\x82Q\x8b\x98E\xcf\xdc\xea\x85\x02'), chr(8819 - 8719) + chr(0b1100101) + chr(0b1100011) + '\157' + chr(9438 - 9338) + '\x65')(chr(0b1000100 + 0o61) + chr(0b1110100) + chr(0b1001011 + 0o33) + chr(0b101101) + chr(2164 - 2108))] = pRO1vq2CdDrs[roI3spqORKae(ES5oEprVxulp(b'9\x82Q\x8b\x98E\xcf\xdc\xea\x85\x02'), '\x64' + '\x65' + chr(99) + '\x6f' + chr(0b1100011 + 0o1) + chr(5539 - 5438))(chr(117) + chr(0b1011001 + 0o33) + chr(0b1100110) + '\x2d' + '\070')] if suIjIS24Zkqw(pRO1vq2CdDrs[roI3spqORKae(ES5oEprVxulp(b'2\x88W\x94\x90R'), chr(0b10110 + 0o116) + '\x65' + '\x63' + chr(495 - 384) + chr(9536 - 9436) + chr(101))(chr(0b100110 + 0o117) + '\x74' + chr(0b101111 + 0o67) + chr(1837 - 1792) + '\070')], znjnJWK64FDT): roI3spqORKae(JAxaJeZALw_t[qOaisbPnJ3WC], roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), '\144' + chr(0b1100101) + chr(0b101111 + 0o64) + chr(111) + chr(0b1100100) + chr(2170 - 2069))(chr(10503 - 10386) + chr(116) + chr(0b10010 + 0o124) + chr(45) + chr(743 - 687)))(roI3spqORKae(ES5oEprVxulp(b';\x84E\x80'), '\144' + chr(101) + chr(0b1100011) + chr(0b1101111) + chr(0b110100 + 0o60) + '\x65')(chr(8089 - 7972) + '\164' + chr(0b1100110) + chr(45) + '\x38'), znjnJWK64FDT()) for BDr7SxpOFXwl in pRO1vq2CdDrs[roI3spqORKae(ES5oEprVxulp(b'2\x88W\x94\x90R'), '\x64' + chr(0b1011100 + 0o11) + chr(99) + chr(111) + chr(100) + chr(0b1010 + 0o133))('\165' + '\x74' + '\146' + chr(0b101101) + chr(56))]: roI3spqORKae(JAxaJeZALw_t[qOaisbPnJ3WC][roI3spqORKae(ES5oEprVxulp(b';\x84E\x80'), chr(0b1100100) + '\145' + chr(0b1100011) + chr(0b1101111) + '\x64' + '\x65')(chr(117) + chr(8032 - 7916) + chr(0b110000 + 0o66) + chr(0b101101) + chr(0b100101 + 0o23))].setdefault(BDr7SxpOFXwl, H4NoA26ON7iG()), roI3spqORKae(ES5oEprVxulp(b'\x17\xb9p\xd2\x81V\xd7\xc7\xf9\x9a2I'), chr(100) + chr(3800 - 3699) + '\x63' + '\x6f' + chr(7307 - 7207) + chr(101))(chr(10821 - 10704) + chr(5195 - 5079) + chr(0b101001 + 0o75) + '\055' + chr(1995 - 1939)))({roI3spqORKae(ES5oEprVxulp(b'2\x82G\x83\x95'), chr(5949 - 5849) + '\145' + chr(0b1010000 + 0o23) + chr(11967 - 11856) + '\x64' + chr(101))('\165' + chr(116) + chr(267 - 165) + chr(106 - 61) + chr(568 - 512)): mzBqnYWciVVa, roI3spqORKae(ES5oEprVxulp(b';\x8cW\x87'), chr(0b1001 + 0o133) + '\145' + chr(0b10001 + 0o122) + '\157' + chr(6329 - 6229) + chr(0b1100101))('\165' + '\164' + '\146' + chr(45) + chr(0b111000)): roI3spqORKae(pRO1vq2CdDrs[roI3spqORKae(ES5oEprVxulp(b';\x8cW\x87'), chr(9445 - 9345) + chr(746 - 645) + '\143' + chr(111) + chr(100) + '\145')(chr(117) + chr(0b1110100) + '\x66' + chr(0b10110 + 0o27) + chr(2856 - 2800))], roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(0b1010111 + 0o15) + chr(0b11110 + 0o107) + '\x63' + chr(0b111000 + 0o67) + chr(0b1100100) + '\145')(chr(9952 - 9835) + chr(0b11001 + 0o133) + '\x66' + '\055' + chr(1190 - 1134)))(BDr7SxpOFXwl), roI3spqORKae(ES5oEprVxulp(b';\x98Q\x87\x8dX\xff\xc6'), chr(0b1000000 + 0o44) + chr(4164 - 4063) + '\x63' + '\157' + '\144' + chr(101))('\165' + '\x74' + '\x66' + chr(45) + '\070'): roI3spqORKae(pRO1vq2CdDrs[roI3spqORKae(ES5oEprVxulp(b';\x98Q\x87\x8dX\xff\xc6'), chr(1465 - 1365) + '\x65' + '\x63' + chr(111) + chr(100) + chr(0b11010 + 0o113))(chr(117) + chr(116) + chr(0b1100110) + chr(0b101011 + 0o2) + chr(56))], roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(7596 - 7496) + chr(0b100000 + 0o105) + chr(0b11110 + 0o105) + chr(0b1101111) + chr(0b1100100) + chr(0b1100101))(chr(117) + '\164' + '\x66' + chr(45) + '\x38'))(BDr7SxpOFXwl), roI3spqORKae(ES5oEprVxulp(b'2\x88P\x95\x98V\xf5'), '\x64' + chr(8799 - 8698) + chr(0b1100011) + chr(111) + chr(0b111010 + 0o52) + chr(101))(chr(2257 - 2140) + chr(116) + '\146' + chr(0b1010 + 0o43) + chr(0b111000)): roI3spqORKae(pRO1vq2CdDrs[roI3spqORKae(ES5oEprVxulp(b'2\x88P\x95\x98V\xf5'), chr(2048 - 1948) + '\145' + chr(0b100 + 0o137) + '\157' + '\x64' + chr(0b1100101))(chr(0b1010 + 0o153) + chr(116) + '\146' + chr(0b100 + 0o51) + chr(0b1 + 0o67))], roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), '\144' + chr(8018 - 7917) + chr(492 - 393) + chr(0b11110 + 0o121) + chr(0b100101 + 0o77) + chr(0b1100101))(chr(11925 - 11808) + chr(2590 - 2474) + chr(0b1100110) + chr(0b101101) + chr(0b11101 + 0o33)))(BDr7SxpOFXwl), roI3spqORKae(ES5oEprVxulp(b'2\x88W\x94\x90R'), chr(0b1100100) + '\x65' + chr(99) + chr(0b111010 + 0o65) + chr(0b1001111 + 0o25) + chr(7533 - 7432))(chr(0b1000000 + 0o65) + chr(0b10 + 0o162) + chr(102) + chr(0b101101) + chr(0b110111 + 0o1)): roI3spqORKae(pRO1vq2CdDrs[roI3spqORKae(ES5oEprVxulp(b'2\x88W\x94\x90R'), chr(100) + chr(0b1100101) + '\143' + '\x6f' + '\x64' + '\145')(chr(117) + chr(116) + chr(102) + chr(819 - 774) + chr(56))], roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(0b1100100) + '\x65' + chr(0b1100011) + '\x6f' + chr(2533 - 2433) + chr(101))(chr(0b111010 + 0o73) + chr(0b1110100) + chr(2962 - 2860) + chr(45) + '\070'))(BDr7SxpOFXwl), roI3spqORKae(ES5oEprVxulp(b'-\x88P\x93\x95E'), chr(8108 - 8008) + chr(0b100010 + 0o103) + chr(99) + chr(0b1101111) + chr(1037 - 937) + '\145')('\165' + '\164' + chr(0b100110 + 0o100) + '\x2d' + '\x38'): roI3spqORKae(pRO1vq2CdDrs[roI3spqORKae(ES5oEprVxulp(b'-\x88P\x93\x95E'), chr(3984 - 3884) + chr(0b1100101) + '\143' + '\x6f' + '\144' + '\x65')(chr(0b1110101) + '\x74' + chr(0b1100110) + chr(0b100010 + 0o13) + chr(0b11000 + 0o40))], roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(0b1100100) + '\x65' + chr(0b1100011) + chr(4307 - 4196) + '\144' + '\145')(chr(0b1100100 + 0o21) + '\164' + '\x66' + chr(1380 - 1335) + chr(2560 - 2504)))(BDr7SxpOFXwl)}) else: roI3spqORKae(JAxaJeZALw_t[qOaisbPnJ3WC], roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(0b1100100) + '\x65' + '\x63' + '\157' + '\144' + chr(0b1100101))('\x75' + '\x74' + chr(0b1100110) + chr(423 - 378) + '\070'))(roI3spqORKae(ES5oEprVxulp(b';\x84E\x80'), chr(0b1001001 + 0o33) + chr(0b1001100 + 0o31) + chr(0b1100011) + chr(4724 - 4613) + '\x64' + chr(0b1100101))(chr(0b110110 + 0o77) + chr(0b1011011 + 0o31) + chr(0b0 + 0o146) + chr(0b101101) + '\070'), H4NoA26ON7iG()) roI3spqORKae(JAxaJeZALw_t[qOaisbPnJ3WC][roI3spqORKae(ES5oEprVxulp(b';\x84E\x80'), '\x64' + '\x65' + chr(262 - 163) + '\x6f' + chr(0b1100100) + '\145')(chr(0b1110101) + chr(116) + chr(102) + chr(1553 - 1508) + chr(0b101011 + 0o15))], roI3spqORKae(ES5oEprVxulp(b'\x17\xb9p\xd2\x81V\xd7\xc7\xf9\x9a2I'), chr(0b110101 + 0o57) + '\145' + chr(0b1100011) + chr(2666 - 2555) + '\144' + chr(9954 - 9853))('\x75' + chr(0b1 + 0o163) + '\x66' + chr(0b11110 + 0o17) + chr(2001 - 1945)))({roI3spqORKae(ES5oEprVxulp(b'2\x82G\x83\x95'), chr(100) + '\x65' + chr(9404 - 9305) + '\157' + '\144' + '\145')('\x75' + chr(0b1000111 + 0o55) + chr(0b1100110) + chr(0b101101) + chr(324 - 268)): mzBqnYWciVVa, roI3spqORKae(ES5oEprVxulp(b';\x8cW\x87'), chr(100) + chr(1803 - 1702) + chr(0b111101 + 0o46) + chr(6491 - 6380) + chr(0b101000 + 0o74) + chr(0b111 + 0o136))(chr(117) + '\164' + chr(0b10000 + 0o126) + '\055' + chr(56)): roI3spqORKae(pRO1vq2CdDrs, roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), '\144' + chr(0b1000010 + 0o43) + chr(99) + chr(0b1101111) + '\x64' + chr(0b110110 + 0o57))(chr(0b1001101 + 0o50) + '\x74' + chr(0b1100110) + '\x2d' + chr(0b10000 + 0o50)))(roI3spqORKae(ES5oEprVxulp(b';\x8cW\x87'), chr(0b1100100) + chr(1935 - 1834) + '\143' + chr(3447 - 3336) + chr(0b1100100) + '\x65')(chr(117) + chr(0b100000 + 0o124) + '\x66' + '\x2d' + '\x38')), roI3spqORKae(ES5oEprVxulp(b';\x98Q\x87\x8dX\xff\xc6'), '\x64' + '\x65' + chr(0b100111 + 0o74) + chr(7540 - 7429) + '\144' + chr(0b100111 + 0o76))('\165' + chr(116) + chr(0b1100110) + '\055' + '\x38'): roI3spqORKae(pRO1vq2CdDrs, roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(100) + '\145' + chr(9667 - 9568) + chr(5713 - 5602) + '\144' + chr(0b1100101))(chr(0b1100100 + 0o21) + chr(116) + chr(0b1100110) + chr(0b100010 + 0o13) + chr(0b101011 + 0o15)))(roI3spqORKae(ES5oEprVxulp(b';\x98Q\x87\x8dX\xff\xc6'), chr(0b1010 + 0o132) + chr(0b1001 + 0o134) + chr(3303 - 3204) + chr(0b1101111) + chr(100) + chr(0b10000 + 0o125))(chr(0b1110101) + '\x74' + chr(0b1100 + 0o132) + chr(154 - 109) + '\x38')), roI3spqORKae(ES5oEprVxulp(b'2\x88P\x95\x98V\xf5'), '\144' + chr(101) + chr(0b111011 + 0o50) + chr(0b101 + 0o152) + chr(0b1100100) + chr(0b1111 + 0o126))('\165' + chr(0b1100111 + 0o15) + chr(0b1100110) + '\x2d' + '\070'): roI3spqORKae(pRO1vq2CdDrs, roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(5029 - 4929) + '\145' + chr(0b1100011) + '\157' + '\144' + chr(101))(chr(0b1110101) + chr(0b10011 + 0o141) + '\146' + '\055' + chr(525 - 469)))(roI3spqORKae(ES5oEprVxulp(b'2\x88P\x95\x98V\xf5'), chr(100) + chr(101) + '\x63' + chr(111) + chr(0b1000110 + 0o36) + chr(0b111001 + 0o54))('\x75' + chr(2952 - 2836) + '\x66' + chr(458 - 413) + chr(0b110010 + 0o6))), roI3spqORKae(ES5oEprVxulp(b'2\x88W\x94\x90R'), chr(0b1100100) + chr(0b101010 + 0o73) + chr(7519 - 7420) + chr(0b1101111) + chr(0b1100100) + '\x65')(chr(117) + chr(0b1100010 + 0o22) + '\146' + chr(0b11010 + 0o23) + chr(0b111000)): roI3spqORKae(pRO1vq2CdDrs, roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(0b100000 + 0o104) + '\145' + chr(9436 - 9337) + chr(0b1001110 + 0o41) + chr(100) + '\x65')(chr(0b10100 + 0o141) + chr(12879 - 12763) + chr(0b1100110) + chr(45) + '\070'))(roI3spqORKae(ES5oEprVxulp(b'2\x88W\x94\x90R'), '\x64' + '\145' + '\143' + chr(111) + chr(100) + chr(0b1100101))('\x75' + '\x74' + chr(102) + chr(0b101101) + chr(141 - 85))), roI3spqORKae(ES5oEprVxulp(b'-\x88P\x93\x95E'), chr(0b101011 + 0o71) + chr(6032 - 5931) + chr(0b1100011) + chr(111) + chr(0b1100100) + '\x65')(chr(117) + chr(0b1110100) + chr(102) + chr(0b101101) + chr(2647 - 2591)): roI3spqORKae(pRO1vq2CdDrs, roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(100) + chr(101) + chr(6065 - 5966) + chr(5832 - 5721) + chr(0b1010000 + 0o24) + chr(6064 - 5963))(chr(117) + '\164' + '\146' + '\x2d' + '\070'))(roI3spqORKae(ES5oEprVxulp(b'-\x88P\x93\x95E'), chr(4921 - 4821) + chr(0b1001111 + 0o26) + chr(0b1100011) + '\x6f' + '\x64' + chr(0b1010 + 0o133))(chr(9918 - 9801) + chr(0b10001 + 0o143) + '\146' + chr(96 - 51) + chr(0b1010 + 0o56)))}) hXMPsSrOQzbh.POx95m7SPOVy = POx95m7SPOVy roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'<\x82N\x96\x8cE\xf5\xf7\xe0\x96\x08\x0e\xc4'), chr(0b1100100) + chr(0b110000 + 0o65) + chr(0b100001 + 0o102) + '\x6f' + chr(100) + chr(101))(chr(0b1110101) + '\164' + '\x66' + chr(45) + chr(56)))() roI3spqORKae(CLmnnuotoMDU.setdefault(roI3spqORKae(ES5oEprVxulp(b'+\x82W\x87\x95n\xe3\xcb\xfc\x87\x02'), chr(0b1100100) + chr(0b1100101) + chr(0b101000 + 0o73) + chr(2406 - 2295) + '\144' + chr(0b1100101))(chr(117) + chr(116) + chr(102) + '\055' + chr(0b111000)), znjnJWK64FDT()), roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(0b1100100) + chr(0b1011 + 0o132) + '\143' + '\157' + chr(0b1100100) + '\x65')('\x75' + chr(0b1110100) + chr(102) + chr(0b11000 + 0o25) + '\070'))(roI3spqORKae(ES5oEprVxulp(b';\x84E\x80'), chr(100) + chr(0b11100 + 0o111) + chr(4998 - 4899) + chr(9919 - 9808) + chr(100) + chr(0b1100101))('\x75' + chr(116) + chr(0b1001011 + 0o33) + chr(57 - 12) + '\070'), H4NoA26ON7iG()) roI3spqORKae(CLmnnuotoMDU.setdefault(roI3spqORKae(ES5oEprVxulp(b',\x88@\x92\x90^\xfe\xdb'), '\144' + chr(4039 - 3938) + chr(0b1100011) + chr(0b1101111) + chr(100) + '\x65')('\165' + chr(4142 - 4026) + chr(0b1100110) + chr(1885 - 1840) + chr(0b111000)), znjnJWK64FDT()), roI3spqORKae(ES5oEprVxulp(b'%\x88\x13\xac\xb4D\xdb\x91\xe1\x9a0/'), chr(0b1100100) + chr(101) + chr(0b11100 + 0o107) + '\157' + chr(0b111110 + 0o46) + chr(101))(chr(0b101001 + 0o114) + chr(0b1110100) + chr(102) + '\x2d' + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b';\x84E\x80'), chr(100) + '\145' + '\x63' + chr(111) + chr(0b11100 + 0o110) + chr(0b1001001 + 0o34))(chr(6582 - 6465) + chr(0b110101 + 0o77) + chr(102) + chr(0b11000 + 0o25) + '\070'), H4NoA26ON7iG()) roI3spqORKae(CLmnnuotoMDU[roI3spqORKae(ES5oEprVxulp(b'+\x82W\x87\x95n\xe3\xcb\xfc\x87\x02'), '\x64' + chr(7188 - 7087) + chr(0b111100 + 0o47) + chr(0b1101010 + 0o5) + chr(0b1100100) + chr(101))('\165' + chr(0b1111 + 0o145) + chr(0b1001100 + 0o32) + chr(0b101000 + 0o5) + chr(792 - 736))][roI3spqORKae(ES5oEprVxulp(b';\x84E\x80'), chr(0b101001 + 0o73) + chr(0b110110 + 0o57) + chr(99) + chr(111) + chr(4122 - 4022) + chr(101))('\x75' + '\164' + chr(102) + '\x2d' + '\x38')], roI3spqORKae(ES5oEprVxulp(b'\x17\xb9p\xd2\x81V\xd7\xc7\xf9\x9a2I'), chr(100) + chr(9503 - 9402) + '\143' + chr(9771 - 9660) + chr(0b1011101 + 0o7) + chr(101))(chr(6642 - 6525) + chr(0b11111 + 0o125) + chr(0b1011000 + 0o16) + '\055' + chr(0b110111 + 0o1)))({roI3spqORKae(ES5oEprVxulp(b'2\x82G\x83\x95'), chr(100) + chr(6536 - 6435) + chr(99) + chr(3201 - 3090) + chr(0b1100100) + chr(5844 - 5743))(chr(117) + chr(0b1110100) + chr(0b101 + 0o141) + '\055' + chr(56)): mzBqnYWciVVa, roI3spqORKae(ES5oEprVxulp(b'+\x82W\x87\x95n\xe3\xcb\xfc\x87\x02'), '\144' + chr(3848 - 3747) + '\x63' + '\x6f' + chr(0b1100100) + '\145')(chr(1059 - 942) + chr(0b1100 + 0o150) + chr(102) + chr(1839 - 1794) + chr(56)): roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\x0f\xa2[\xdf\xcc\\\xa7\xfb\xc3\xba1\x05'), chr(0b11101 + 0o107) + chr(101) + chr(0b1100011) + chr(0b10101 + 0o132) + chr(100) + chr(0b1100101))(chr(0b1101010 + 0o13) + '\x74' + chr(0b111011 + 0o53) + chr(45) + chr(0b111000)))[roI3spqORKae(ES5oEprVxulp(b',\x8eL\x94\x9c'), chr(100) + chr(0b100010 + 0o103) + chr(2409 - 2310) + chr(6225 - 6114) + chr(0b1100100) + '\x65')('\165' + chr(116) + chr(0b1100110 + 0o0) + chr(45) + chr(2581 - 2525))][roI3spqORKae(ES5oEprVxulp(b'+\x82W\x87\x95n\xe3\xcb\xfc\x87\x02'), '\144' + chr(101) + chr(0b1100011) + chr(7335 - 7224) + '\144' + chr(5007 - 4906))('\x75' + '\164' + chr(0b1010010 + 0o24) + chr(0b101101) + chr(0b111000))]}) for qpII1aNYuV7Z in roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\x0f\xa2[\xdf\xcc\\\xa7\xfb\xc3\xba1\x05'), '\x64' + chr(0b1100101) + '\x63' + chr(10832 - 10721) + '\x64' + chr(101))('\165' + chr(13288 - 13172) + '\x66' + chr(1758 - 1713) + chr(0b111000)))[roI3spqORKae(ES5oEprVxulp(b',\x8eL\x94\x9c'), chr(100) + chr(0b110000 + 0o65) + '\x63' + '\157' + '\x64' + '\145')(chr(5267 - 5150) + chr(0b1110100) + chr(0b10110 + 0o120) + chr(0b100111 + 0o6) + chr(0b110110 + 0o2))][roI3spqORKae(ES5oEprVxulp(b',\x88@\x92\x90^\xfe\xdb'), chr(100) + chr(0b1100100 + 0o1) + '\143' + chr(0b111100 + 0o63) + chr(4356 - 4256) + chr(0b1100101))('\x75' + chr(116) + chr(102) + '\x2d' + chr(0b1100 + 0o54))]: roI3spqORKae(qpII1aNYuV7Z, roI3spqORKae(ES5oEprVxulp(b'\x15\xb2H\xd4\xb0h\xd2\x99\xf0\x90\x16\x12'), '\x64' + '\145' + '\x63' + chr(0b1100010 + 0o15) + '\x64' + '\145')('\x75' + chr(4014 - 3898) + chr(6638 - 6536) + chr(1762 - 1717) + chr(56)))({roI3spqORKae(ES5oEprVxulp(b'2\x82G\x83\x95'), chr(0b1100010 + 0o2) + '\145' + chr(0b1100011) + '\x6f' + '\x64' + '\x65')(chr(117) + '\x74' + chr(0b101011 + 0o73) + '\055' + chr(2223 - 2167)): mzBqnYWciVVa}) roI3spqORKae(CLmnnuotoMDU[roI3spqORKae(ES5oEprVxulp(b',\x88@\x92\x90^\xfe\xdb'), '\x64' + chr(101) + chr(0b1100011) + '\x6f' + chr(0b1100100) + '\x65')('\165' + '\x74' + chr(0b1100110) + chr(0b1111 + 0o36) + chr(0b111000))][roI3spqORKae(ES5oEprVxulp(b';\x84E\x80'), '\x64' + chr(0b111011 + 0o52) + '\143' + chr(0b1101111) + chr(0b1011010 + 0o12) + chr(0b1010010 + 0o23))('\165' + chr(0b1110100) + chr(0b1 + 0o145) + chr(45) + '\070')], roI3spqORKae(ES5oEprVxulp(b'\x17\xb9p\xd2\x81V\xd7\xc7\xf9\x9a2I'), '\x64' + chr(101) + chr(329 - 230) + chr(0b1101111) + chr(7141 - 7041) + chr(0b110111 + 0o56))(chr(117) + '\x74' + chr(102) + chr(0b11000 + 0o25) + '\070'))(qpII1aNYuV7Z) return xvptlew7LsBo
opencobra/memote
scripts/annotate_mnx_shortlists.py
generate_shortlist
def generate_shortlist(mnx_db, shortlist): """ Create a condensed cross-references format from data in long form. Both data frames must contain a column 'MNX_ID' and the dump is assumed to also have a column 'XREF'. Parameters ---------- mnx_db : pandas.DataFrame The entire MetaNetX dump as a data frame. shortlist : pandas.DataFrame The shortlist of targets as a data frame. Returns ------- pandas.DataFrame A condensed format with MetaNetX identifiers as the column index and database identifiers as the row index. Elements are lists and often have multiple entries. """ # Reduce the whole database to targets of interest. xref = mnx_db.loc[mnx_db["MNX_ID"].isin(shortlist["MNX_ID"]), :] # Drop deprecated MetaNetX identifiers. Disabled for now. # xref = xref.loc[~xref["XREF"].str.startswith("deprecated", na=False), :] # Drop self-references for now since they don't follow the format. xref = xref.loc[xref["XREF"] != xref["MNX_ID"], :] # Split namespaces from identifiers. xref[["XREF_ID", "XREF"]] = xref["XREF"].str.split(":", n=1, expand=True) # Group the data in the xref dataframe so that one MNX ID maps to all # corresponding cross-references from other databases. Then list all # identifiers that belong to these databases: # MNX_ID XREF_ID # MNXM0 chebi [23367, 59999] # metacyc [UNKNOWN] # Make a separate column for every XREF_ID: # MNX_ID chebi metacyc # MNXM0 [23367, 59999] [UNKNOWN] xref = xref.groupby(["MNX_ID", "XREF_ID"], as_index=False, sort=False)[ "XREF"].apply(list).unstack('XREF_ID') # Re-insert MetaNetX identifiers as lists. # FIXME: Shouldn't we use metanetx.chemical here instead of 'mnx'? xref["mnx"] = [[x] for x in xref.index] # Transpose the data frame such that the index are now xref databases and # the column names are MetaNetX identifiers. return xref.T
python
def generate_shortlist(mnx_db, shortlist): """ Create a condensed cross-references format from data in long form. Both data frames must contain a column 'MNX_ID' and the dump is assumed to also have a column 'XREF'. Parameters ---------- mnx_db : pandas.DataFrame The entire MetaNetX dump as a data frame. shortlist : pandas.DataFrame The shortlist of targets as a data frame. Returns ------- pandas.DataFrame A condensed format with MetaNetX identifiers as the column index and database identifiers as the row index. Elements are lists and often have multiple entries. """ # Reduce the whole database to targets of interest. xref = mnx_db.loc[mnx_db["MNX_ID"].isin(shortlist["MNX_ID"]), :] # Drop deprecated MetaNetX identifiers. Disabled for now. # xref = xref.loc[~xref["XREF"].str.startswith("deprecated", na=False), :] # Drop self-references for now since they don't follow the format. xref = xref.loc[xref["XREF"] != xref["MNX_ID"], :] # Split namespaces from identifiers. xref[["XREF_ID", "XREF"]] = xref["XREF"].str.split(":", n=1, expand=True) # Group the data in the xref dataframe so that one MNX ID maps to all # corresponding cross-references from other databases. Then list all # identifiers that belong to these databases: # MNX_ID XREF_ID # MNXM0 chebi [23367, 59999] # metacyc [UNKNOWN] # Make a separate column for every XREF_ID: # MNX_ID chebi metacyc # MNXM0 [23367, 59999] [UNKNOWN] xref = xref.groupby(["MNX_ID", "XREF_ID"], as_index=False, sort=False)[ "XREF"].apply(list).unstack('XREF_ID') # Re-insert MetaNetX identifiers as lists. # FIXME: Shouldn't we use metanetx.chemical here instead of 'mnx'? xref["mnx"] = [[x] for x in xref.index] # Transpose the data frame such that the index are now xref databases and # the column names are MetaNetX identifiers. return xref.T
[ "def", "generate_shortlist", "(", "mnx_db", ",", "shortlist", ")", ":", "# Reduce the whole database to targets of interest.", "xref", "=", "mnx_db", ".", "loc", "[", "mnx_db", "[", "\"MNX_ID\"", "]", ".", "isin", "(", "shortlist", "[", "\"MNX_ID\"", "]", ")", ",", ":", "]", "# Drop deprecated MetaNetX identifiers. Disabled for now.", "# xref = xref.loc[~xref[\"XREF\"].str.startswith(\"deprecated\", na=False), :]", "# Drop self-references for now since they don't follow the format.", "xref", "=", "xref", ".", "loc", "[", "xref", "[", "\"XREF\"", "]", "!=", "xref", "[", "\"MNX_ID\"", "]", ",", ":", "]", "# Split namespaces from identifiers.", "xref", "[", "[", "\"XREF_ID\"", ",", "\"XREF\"", "]", "]", "=", "xref", "[", "\"XREF\"", "]", ".", "str", ".", "split", "(", "\":\"", ",", "n", "=", "1", ",", "expand", "=", "True", ")", "# Group the data in the xref dataframe so that one MNX ID maps to all", "# corresponding cross-references from other databases. Then list all", "# identifiers that belong to these databases:", "# MNX_ID XREF_ID", "# MNXM0 chebi [23367, 59999]", "# metacyc [UNKNOWN]", "# Make a separate column for every XREF_ID:", "# MNX_ID chebi metacyc", "# MNXM0 [23367, 59999] [UNKNOWN]", "xref", "=", "xref", ".", "groupby", "(", "[", "\"MNX_ID\"", ",", "\"XREF_ID\"", "]", ",", "as_index", "=", "False", ",", "sort", "=", "False", ")", "[", "\"XREF\"", "]", ".", "apply", "(", "list", ")", ".", "unstack", "(", "'XREF_ID'", ")", "# Re-insert MetaNetX identifiers as lists.", "# FIXME: Shouldn't we use metanetx.chemical here instead of 'mnx'?", "xref", "[", "\"mnx\"", "]", "=", "[", "[", "x", "]", "for", "x", "in", "xref", ".", "index", "]", "# Transpose the data frame such that the index are now xref databases and", "# the column names are MetaNetX identifiers.", "return", "xref", ".", "T" ]
Create a condensed cross-references format from data in long form. Both data frames must contain a column 'MNX_ID' and the dump is assumed to also have a column 'XREF'. Parameters ---------- mnx_db : pandas.DataFrame The entire MetaNetX dump as a data frame. shortlist : pandas.DataFrame The shortlist of targets as a data frame. Returns ------- pandas.DataFrame A condensed format with MetaNetX identifiers as the column index and database identifiers as the row index. Elements are lists and often have multiple entries.
[ "Create", "a", "condensed", "cross", "-", "references", "format", "from", "data", "in", "long", "form", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/scripts/annotate_mnx_shortlists.py#L50-L96
train
Generate a condensed cross - reference format from data in long form.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(54) + '\x35', 0b1000), nzTpIcepk0o8(chr(0b11001 + 0o27) + chr(0b1101111) + chr(49) + '\x32' + chr(0b110010 + 0o0), 0o10), nzTpIcepk0o8(chr(2110 - 2062) + '\x6f' + chr(0b111 + 0o54) + chr(0b110011) + chr(53), 62793 - 62785), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(49) + '\x35' + chr(52), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b100101 + 0o21) + '\x36', 0o10), nzTpIcepk0o8('\060' + chr(111) + '\x32' + chr(0b110000), 21117 - 21109), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\067' + chr(51), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + '\x32' + '\064' + chr(0b110100), 0o10), nzTpIcepk0o8('\060' + chr(4330 - 4219) + chr(52) + chr(0b110011), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(1075 - 1024) + '\x30' + chr(1344 - 1295), 0o10), nzTpIcepk0o8(chr(48) + chr(11890 - 11779) + chr(0b101000 + 0o12) + chr(696 - 642) + chr(51), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(0b101111 + 0o4) + chr(1930 - 1875) + chr(0b101001 + 0o13), 32527 - 32519), nzTpIcepk0o8(chr(0b1011 + 0o45) + chr(0b1101111) + '\061' + chr(0b11110 + 0o25) + chr(79 - 24), 36417 - 36409), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110010) + chr(0b110010) + '\061', 49481 - 49473), nzTpIcepk0o8(chr(0b110000) + chr(0b1010 + 0o145) + chr(0b10010 + 0o45) + chr(0b1001 + 0o47), 0b1000), nzTpIcepk0o8(chr(231 - 183) + chr(422 - 311) + '\063' + '\062' + chr(0b10111 + 0o32), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(1602 - 1554), 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(0b100011 + 0o17) + '\x35' + chr(0b110000), 0b1000), nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(0b1000000 + 0o57) + chr(439 - 390) + '\061' + '\x32', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110001) + '\066' + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(0b11110 + 0o22) + '\157' + '\063' + chr(0b110111) + '\061', 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x33' + chr(0b100011 + 0o17), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110010) + '\060', 8), nzTpIcepk0o8('\060' + chr(0b10011 + 0o134) + chr(0b1001 + 0o51) + chr(53) + chr(51), 57041 - 57033), nzTpIcepk0o8('\x30' + chr(111) + '\063' + chr(52) + '\067', 0b1000), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(0b1101111) + '\062' + '\x31' + chr(0b100000 + 0o25), 0b1000), nzTpIcepk0o8(chr(1275 - 1227) + '\x6f' + '\067' + chr(54), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x32' + chr(2904 - 2849) + '\067', 0o10), nzTpIcepk0o8(chr(959 - 911) + chr(0b1100000 + 0o17) + '\x31' + '\x32' + chr(53), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(295 - 245) + chr(0b110100) + chr(0b110001), 18952 - 18944), nzTpIcepk0o8(chr(687 - 639) + chr(0b101 + 0o152) + chr(0b110001) + chr(2290 - 2242) + chr(0b10 + 0o62), ord("\x08")), nzTpIcepk0o8(chr(0b11100 + 0o24) + chr(111) + chr(0b100110 + 0o15) + chr(49) + '\065', 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(50) + chr(0b110110) + '\060', 20517 - 20509), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b100 + 0o57) + chr(0b110011) + chr(0b110001 + 0o2), 0o10), nzTpIcepk0o8(chr(0b11111 + 0o21) + chr(0b1011101 + 0o22) + chr(49) + '\x37' + chr(1699 - 1651), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110010) + chr(0b110111) + chr(0b110011), 0b1000), nzTpIcepk0o8('\x30' + chr(8684 - 8573) + '\x35' + '\064', 1701 - 1693), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b100000 + 0o23) + '\x33' + chr(49), 63071 - 63063), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x33' + chr(0b101101 + 0o5) + chr(0b110011), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + '\x6f' + chr(718 - 665) + chr(0b110000), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x1b'), chr(100) + '\145' + chr(0b1111 + 0o124) + '\157' + chr(100) + '\145')(chr(0b101 + 0o160) + chr(0b10010 + 0o142) + chr(10087 - 9985) + chr(45) + chr(2450 - 2394)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def qukBQYWf479y(N9gVMzChWLjW, PIQCQ2GwNcmI): Qz5R7wINHhh1 = N9gVMzChWLjW.UQ8hRiBoHcn5[N9gVMzChWLjW[roI3spqORKae(ES5oEprVxulp(b'x\x1c\x853\x7fT'), '\x64' + chr(3137 - 3036) + '\143' + chr(111) + chr(0b10111 + 0o115) + '\145')(chr(0b1110101) + '\164' + chr(0b1100110) + chr(0b101101) + chr(0b1010 + 0o56))].isin(PIQCQ2GwNcmI[roI3spqORKae(ES5oEprVxulp(b'x\x1c\x853\x7fT'), chr(4575 - 4475) + chr(0b10101 + 0o120) + '\x63' + chr(111) + chr(0b110101 + 0o57) + chr(0b1010010 + 0o23))('\165' + '\x74' + chr(102) + '\x2d' + chr(2755 - 2699))]), :] Qz5R7wINHhh1 = Qz5R7wINHhh1.UQ8hRiBoHcn5[Qz5R7wINHhh1[roI3spqORKae(ES5oEprVxulp(b'm\x00\x98*'), '\x64' + chr(0b111000 + 0o55) + chr(0b1000 + 0o133) + '\x6f' + '\144' + chr(0b1100101))(chr(117) + chr(1823 - 1707) + chr(0b1100110) + chr(0b101011 + 0o2) + '\x38')] != Qz5R7wINHhh1[roI3spqORKae(ES5oEprVxulp(b'x\x1c\x853\x7fT'), chr(100) + '\145' + chr(0b110111 + 0o54) + '\x6f' + chr(2170 - 2070) + chr(101))('\165' + '\164' + chr(0b1110 + 0o130) + chr(0b101101) + chr(809 - 753))], :] Qz5R7wINHhh1[[roI3spqORKae(ES5oEprVxulp(b'm\x00\x98*iY\x7f'), chr(0b1100100) + chr(101) + '\x63' + chr(10098 - 9987) + chr(100) + chr(0b1100101))(chr(10010 - 9893) + '\164' + chr(10280 - 10178) + '\x2d' + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'm\x00\x98*'), chr(0b1100100) + '\145' + chr(0b1100011) + chr(1204 - 1093) + chr(0b100000 + 0o104) + '\145')('\x75' + chr(0b1110100) + chr(0b1100110) + chr(2014 - 1969) + chr(0b100100 + 0o24))]] = Qz5R7wINHhh1[roI3spqORKae(ES5oEprVxulp(b'm\x00\x98*'), chr(8833 - 8733) + chr(0b1100101) + chr(99) + '\157' + chr(100) + chr(101))('\165' + chr(116) + '\x66' + chr(0b11101 + 0o20) + chr(0b10101 + 0o43))].str.LfRrQOxuDvnC(roI3spqORKae(ES5oEprVxulp(b'\x0f'), chr(100) + chr(101) + '\143' + chr(0b1101111) + chr(0b1100100) + chr(1739 - 1638))('\x75' + chr(0b1110100) + '\x66' + '\x2d' + chr(56)), n=nzTpIcepk0o8('\060' + chr(0b101010 + 0o105) + chr(0b1000 + 0o51), 0o10), expand=nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(49), 8)) Qz5R7wINHhh1 = Qz5R7wINHhh1.groupby([roI3spqORKae(ES5oEprVxulp(b'x\x1c\x853\x7fT'), chr(100) + '\145' + chr(0b1100011) + chr(11675 - 11564) + '\x64' + chr(0b1010100 + 0o21))(chr(0b1101111 + 0o6) + chr(3140 - 3024) + '\x66' + chr(45) + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'm\x00\x98*iY\x7f'), chr(9898 - 9798) + chr(0b1100101) + chr(4591 - 4492) + chr(0b1101111) + chr(100) + chr(0b1100011 + 0o2))(chr(6489 - 6372) + '\x74' + chr(0b1100110) + chr(1503 - 1458) + '\070')], as_index=nzTpIcepk0o8('\x30' + chr(111) + chr(0b110000), 8), sort=nzTpIcepk0o8('\060' + chr(111) + chr(0b110000), 8))[roI3spqORKae(ES5oEprVxulp(b'm\x00\x98*'), '\x64' + '\145' + chr(0b1100011) + '\x6f' + chr(0b1100100) + chr(0b1100101))('\x75' + '\164' + '\x66' + '\x2d' + '\x38')].apply(H4NoA26ON7iG).unstack(roI3spqORKae(ES5oEprVxulp(b'm\x00\x98*iY\x7f'), '\144' + chr(101) + '\143' + chr(9271 - 9160) + '\144' + chr(0b110010 + 0o63))('\165' + chr(0b1110100) + chr(0b1100110) + chr(45) + chr(1724 - 1668))) Qz5R7wINHhh1[roI3spqORKae(ES5oEprVxulp(b'X<\xa5'), '\x64' + '\x65' + chr(0b1010111 + 0o14) + chr(111) + chr(100) + chr(0b1000110 + 0o37))('\x75' + chr(9444 - 9328) + '\x66' + chr(45) + chr(56))] = [[bI5jsQ9OkQtj] for bI5jsQ9OkQtj in Qz5R7wINHhh1.ZpfN5tSLaZze] return roI3spqORKae(Qz5R7wINHhh1, roI3spqORKae(ES5oEprVxulp(b']#\xeb4s$d\xeaK\xa5\x85\xae'), '\144' + chr(101) + chr(3800 - 3701) + '\157' + chr(100) + chr(0b1000110 + 0o37))(chr(0b1110101) + '\x74' + '\x66' + '\x2d' + chr(56)))
opencobra/memote
scripts/annotate_mnx_shortlists.py
generate
def generate(mnx_dump): """ Annotate a shortlist of metabolites with cross-references using MetaNetX. MNX_DUMP : The chemicals dump from MetaNetX usually called 'chem_xref.tsv'. Will be downloaded if it doesn't exist. """ LOGGER.info("Read shortlist.") targets = pd.read_table(join(dirname(__file__), "shortlist.tsv")) if not exists(mnx_dump): # Download the MetaNetX chemicals dump if it doesn't exists. # Download done as per https://stackoverflow.com/a/16696317. LOGGER.info("MetaNetX dump '%s' does not exist. Downloading...", mnx_dump) with open(mnx_dump, "wb") as file_handle, \ get("https://www.metanetx.org/cgi-bin/mnxget/mnxref/chem_xref.tsv", stream=True) as stream: for chunk in stream.iter_content(chunk_size=1024): file_handle.write(chunk) LOGGER.info("Done.") LOGGER.info("Read the MetaNetX dump with cross-references.") db = pd.read_table(mnx_dump, comment='#', names=['XREF', 'MNX_ID', 'Evidence', 'Description']) LOGGER.info("Generate the shortlist cross-references.") res = generate_shortlist(db, targets) LOGGER.info("Save result.") res.to_json(join(dirname(__file__), pardir, "memote", "support", "data", "met_id_shortlist.json"), force_ascii=False)
python
def generate(mnx_dump): """ Annotate a shortlist of metabolites with cross-references using MetaNetX. MNX_DUMP : The chemicals dump from MetaNetX usually called 'chem_xref.tsv'. Will be downloaded if it doesn't exist. """ LOGGER.info("Read shortlist.") targets = pd.read_table(join(dirname(__file__), "shortlist.tsv")) if not exists(mnx_dump): # Download the MetaNetX chemicals dump if it doesn't exists. # Download done as per https://stackoverflow.com/a/16696317. LOGGER.info("MetaNetX dump '%s' does not exist. Downloading...", mnx_dump) with open(mnx_dump, "wb") as file_handle, \ get("https://www.metanetx.org/cgi-bin/mnxget/mnxref/chem_xref.tsv", stream=True) as stream: for chunk in stream.iter_content(chunk_size=1024): file_handle.write(chunk) LOGGER.info("Done.") LOGGER.info("Read the MetaNetX dump with cross-references.") db = pd.read_table(mnx_dump, comment='#', names=['XREF', 'MNX_ID', 'Evidence', 'Description']) LOGGER.info("Generate the shortlist cross-references.") res = generate_shortlist(db, targets) LOGGER.info("Save result.") res.to_json(join(dirname(__file__), pardir, "memote", "support", "data", "met_id_shortlist.json"), force_ascii=False)
[ "def", "generate", "(", "mnx_dump", ")", ":", "LOGGER", ".", "info", "(", "\"Read shortlist.\"", ")", "targets", "=", "pd", ".", "read_table", "(", "join", "(", "dirname", "(", "__file__", ")", ",", "\"shortlist.tsv\"", ")", ")", "if", "not", "exists", "(", "mnx_dump", ")", ":", "# Download the MetaNetX chemicals dump if it doesn't exists.", "# Download done as per https://stackoverflow.com/a/16696317.", "LOGGER", ".", "info", "(", "\"MetaNetX dump '%s' does not exist. Downloading...\"", ",", "mnx_dump", ")", "with", "open", "(", "mnx_dump", ",", "\"wb\"", ")", "as", "file_handle", ",", "get", "(", "\"https://www.metanetx.org/cgi-bin/mnxget/mnxref/chem_xref.tsv\"", ",", "stream", "=", "True", ")", "as", "stream", ":", "for", "chunk", "in", "stream", ".", "iter_content", "(", "chunk_size", "=", "1024", ")", ":", "file_handle", ".", "write", "(", "chunk", ")", "LOGGER", ".", "info", "(", "\"Done.\"", ")", "LOGGER", ".", "info", "(", "\"Read the MetaNetX dump with cross-references.\"", ")", "db", "=", "pd", ".", "read_table", "(", "mnx_dump", ",", "comment", "=", "'#'", ",", "names", "=", "[", "'XREF'", ",", "'MNX_ID'", ",", "'Evidence'", ",", "'Description'", "]", ")", "LOGGER", ".", "info", "(", "\"Generate the shortlist cross-references.\"", ")", "res", "=", "generate_shortlist", "(", "db", ",", "targets", ")", "LOGGER", ".", "info", "(", "\"Save result.\"", ")", "res", ".", "to_json", "(", "join", "(", "dirname", "(", "__file__", ")", ",", "pardir", ",", "\"memote\"", ",", "\"support\"", ",", "\"data\"", ",", "\"met_id_shortlist.json\"", ")", ",", "force_ascii", "=", "False", ")" ]
Annotate a shortlist of metabolites with cross-references using MetaNetX. MNX_DUMP : The chemicals dump from MetaNetX usually called 'chem_xref.tsv'. Will be downloaded if it doesn't exist.
[ "Annotate", "a", "shortlist", "of", "metabolites", "with", "cross", "-", "references", "using", "MetaNetX", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/scripts/annotate_mnx_shortlists.py#L105-L133
train
Generate a shortlist of metabolites with cross - references using MetaNetX.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(0b100011 + 0o114) + '\x31' + '\x30' + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b10111 + 0o31) + '\157' + chr(0b1111 + 0o43) + chr(620 - 567) + chr(52), 18432 - 18424), nzTpIcepk0o8(chr(0b100001 + 0o17) + '\x6f' + '\x37' + chr(1075 - 1025), 44356 - 44348), nzTpIcepk0o8(chr(1094 - 1046) + chr(111) + '\x35' + chr(513 - 465), 0b1000), nzTpIcepk0o8('\x30' + '\157' + '\063' + chr(0b110011 + 0o4) + '\x36', 32437 - 32429), nzTpIcepk0o8(chr(0b110000) + chr(0b10110 + 0o131) + chr(0b10 + 0o61) + '\062' + '\065', 0b1000), nzTpIcepk0o8('\060' + chr(0b111110 + 0o61) + chr(0b11101 + 0o25) + '\065' + chr(2184 - 2134), 0b1000), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(0b111100 + 0o63) + chr(0b110011) + chr(1195 - 1142) + chr(0b100000 + 0o21), ord("\x08")), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(111) + chr(2380 - 2330) + chr(0b0 + 0o65) + '\x30', 35476 - 35468), nzTpIcepk0o8('\060' + chr(111) + '\063' + chr(1765 - 1714) + chr(219 - 164), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110001) + chr(154 - 105) + '\x31', 29925 - 29917), nzTpIcepk0o8(chr(0b10 + 0o56) + '\x6f' + chr(50) + '\x36' + chr(55), 7375 - 7367), nzTpIcepk0o8('\x30' + '\157' + '\x31' + chr(1464 - 1414) + chr(0b100010 + 0o16), 0o10), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(111) + '\062' + chr(661 - 607) + chr(0b101000 + 0o15), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + '\062' + '\x36' + chr(0b11100 + 0o26), ord("\x08")), nzTpIcepk0o8('\x30' + chr(8334 - 8223) + '\x32' + chr(0b110100) + chr(50), 0o10), nzTpIcepk0o8(chr(48) + chr(2413 - 2302) + chr(49) + chr(48) + chr(0b110111), 8), nzTpIcepk0o8('\060' + chr(0b1010100 + 0o33) + chr(1012 - 961) + chr(0b110000), 62924 - 62916), nzTpIcepk0o8('\x30' + chr(9399 - 9288) + chr(1084 - 1035) + chr(53) + chr(1428 - 1380), 41137 - 41129), nzTpIcepk0o8(chr(0b1110 + 0o42) + '\x6f' + chr(49) + '\063' + chr(0b110111), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(0b101 + 0o62) + chr(50), 8), nzTpIcepk0o8(chr(1294 - 1246) + chr(973 - 862) + chr(0b110001) + '\x32' + '\x37', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b1001 + 0o52) + '\x36' + chr(0b110111), 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110001) + chr(0b1111 + 0o41) + chr(50), 11021 - 11013), nzTpIcepk0o8(chr(0b11011 + 0o25) + chr(0b1101111) + chr(1830 - 1781) + chr(2401 - 2346) + '\067', 925 - 917), nzTpIcepk0o8(chr(1325 - 1277) + chr(0b10100 + 0o133) + '\x32' + '\x31' + chr(0b110100), 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(0b110011) + chr(50) + '\x36', 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110010) + chr(1075 - 1024) + chr(0b101111 + 0o6), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b10100 + 0o133) + '\061' + chr(0b10001 + 0o44) + '\x30', 8), nzTpIcepk0o8(chr(48) + chr(0b111110 + 0o61) + chr(0b110000 + 0o3) + chr(2101 - 2049), 41679 - 41671), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(0b1101111) + chr(667 - 617) + '\061' + chr(971 - 922), ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + chr(866 - 817) + chr(0b110000) + chr(49), 64034 - 64026), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x31' + chr(2585 - 2531) + chr(55), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + '\062' + chr(0b110111), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110010) + chr(0b110110) + chr(0b101110 + 0o10), 0o10), nzTpIcepk0o8(chr(0b101 + 0o53) + chr(111) + '\x31' + '\066', ord("\x08")), nzTpIcepk0o8(chr(0b11010 + 0o26) + chr(111) + chr(197 - 148) + chr(48), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b101 + 0o55) + '\061' + chr(0b111 + 0o54), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(1158 - 1107) + '\x33' + chr(0b110011), 4752 - 4744), nzTpIcepk0o8(chr(48) + chr(6586 - 6475) + chr(0b110011) + chr(53) + '\x37', ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + chr(0b1001000 + 0o47) + '\065' + chr(0b110000), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'i'), chr(0b1100100) + '\145' + chr(7483 - 7384) + chr(0b1101111) + '\x64' + chr(0b1100101))(chr(2424 - 2307) + chr(10250 - 10134) + chr(0b1100110) + chr(340 - 295) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def oOKT6lggWhPk(IAU50GMpkadz): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'.\xd4tP\xc7\x99\xdd\xb6\x99\xb8;\xf8'), chr(0b1011011 + 0o11) + chr(1560 - 1459) + chr(0b1100011) + '\x6f' + chr(0b1100100) + chr(9023 - 8922))(chr(0b1110101) + '\x74' + '\x66' + chr(874 - 829) + '\070'))(roI3spqORKae(ES5oEprVxulp(b'\x15\xc9[L\xde\xa6\xc2\x86\xda\xab%\xde#\xc1\x9c'), chr(100) + chr(101) + chr(0b10111 + 0o114) + chr(111) + chr(0b1100100) + '\145')(chr(117) + chr(7585 - 7469) + chr(0b1100110) + chr(0b101010 + 0o3) + chr(56))) EimwNJpLUnf_ = HLKt4sa1j9hm.read_table(Y4yM9BcfTCNq(qu5fsQlGSLfc(OHWDi_URd_WF), roI3spqORKae(ES5oEprVxulp(b'4\xc4UZ\x8a\xb9\xc3\x9a\xdc\xf1=\xc4&'), chr(1922 - 1822) + chr(0b1100101) + '\x63' + '\x6f' + chr(0b11010 + 0o112) + chr(7013 - 6912))(chr(0b1110101) + '\x74' + '\146' + '\055' + chr(0b111000)))) if not zSIynPuEvlQ4(IAU50GMpkadz): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'.\xd4tP\xc7\x99\xdd\xb6\x99\xb8;\xf8'), chr(0b1100100) + chr(0b1000 + 0o135) + chr(2209 - 2110) + '\157' + '\144' + chr(0b1011001 + 0o14))(chr(0b1110101) + chr(116) + chr(8339 - 8237) + chr(45) + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'\n\xc9NI\xb0\xb0\xde\xb1\x88\xbb<\xda \x95\x95\x874?H;U2\x84b\x11\xe3\xa2\xbd\rd\xe02\x039\x96Jg\xfc\xb5\x83(\xcd^A\x90\xb2\x84\xc7\x86'), chr(147 - 47) + chr(101) + '\143' + '\157' + chr(0b1010100 + 0o20) + chr(0b110101 + 0o60))(chr(117) + chr(0b1110100) + chr(0b10110 + 0o120) + '\055' + '\070'), IAU50GMpkadz) with DnU3Rq9N5ala(IAU50GMpkadz, roI3spqORKae(ES5oEprVxulp(b'0\xce'), chr(0b11111 + 0o105) + chr(0b1100101) + chr(6409 - 6310) + chr(7619 - 7508) + chr(0b10110 + 0o116) + '\x65')('\x75' + chr(0b1110100) + chr(0b1010110 + 0o20) + chr(0b101101) + chr(56))) as rC115QJVCRma, GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b"/\xd8NX\x8d\xef\x85\xc6\xdf\xa8>\x99=\xd0\xc6\xc3)}\x1c'\x148\x85%P\xef\xb1\xf4E~\xe0/Xz\xd8vo\xee\xaf\xc0*\xc2BZ\x9b\xb3\x85\x8a\xc0\xba$\xe8(\xc7\xd7\xc4il\x1b)"), '\x64' + chr(101) + chr(1478 - 1379) + chr(111) + '\144' + chr(0b1100101))('\165' + '\164' + chr(8443 - 8341) + chr(0b1 + 0o54) + chr(56)), stream=nzTpIcepk0o8(chr(0b1010 + 0o46) + chr(1398 - 1287) + chr(0b11110 + 0o23), 0b1000)) as ztC3O2ZXmsJr: for WckxBx1Uqdpm in roI3spqORKae(ztC3O2ZXmsJr, roI3spqORKae(ES5oEprVxulp(b".\xd8_Z\xa1\xb6\xc5\x87\xdc\xba'\xc3"), chr(4582 - 4482) + chr(0b1100101) + chr(0b1100011) + '\157' + '\x64' + chr(0b1100101))(chr(3728 - 3611) + chr(11644 - 11528) + '\x66' + chr(0b101101) + '\x38'))(chunk_size=nzTpIcepk0o8(chr(586 - 538) + chr(0b1001011 + 0o44) + '\x32' + chr(2248 - 2200) + '\x30' + chr(48), 0b1000)): roI3spqORKae(rC115QJVCRma, roI3spqORKae(ES5oEprVxulp(b'*\xc0\n@\x96\xa5\xdc\xd8\xe4\xaf8\x85'), '\x64' + chr(101) + chr(0b1100000 + 0o3) + '\x6f' + chr(2346 - 2246) + chr(0b1110 + 0o127))(chr(117) + chr(116) + chr(5300 - 5198) + chr(0b11111 + 0o16) + '\x38'))(WckxBx1Uqdpm) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'.\xd4tP\xc7\x99\xdd\xb6\x99\xb8;\xf8'), '\x64' + '\145' + chr(0b1100011) + '\157' + chr(0b1100100) + chr(0b1100101))(chr(0b10010 + 0o143) + chr(0b1110100) + chr(8770 - 8668) + chr(508 - 463) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'\x03\xc3TM\xd0'), chr(6471 - 6371) + '\145' + chr(99) + chr(0b101000 + 0o107) + '\144' + chr(101))(chr(117) + '\x74' + chr(102) + '\055' + chr(56))) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'.\xd4tP\xc7\x99\xdd\xb6\x99\xb8;\xf8'), chr(0b1011101 + 0o7) + chr(3760 - 3659) + '\143' + '\x6f' + chr(4205 - 4105) + chr(0b1100101))('\165' + '\x74' + '\146' + chr(606 - 561) + chr(56)))(roI3spqORKae(ES5oEprVxulp(b"\x15\xc9[L\xde\xa1\xc2\x8c\x88\x92,\xc31\xfb\xd7\xd6\x1f8\x0c*W'\xd75\x16\xf8\xbe\xbd\x0bn\xe62\x04:\xc4kn\xee\xa9\x8a)\xcf_[\xd0"), chr(0b1010101 + 0o17) + '\145' + chr(6331 - 6232) + '\x6f' + chr(100) + chr(7889 - 7788))(chr(0b1000100 + 0o61) + '\x74' + chr(0b1100110) + '\x2d' + '\070')) HW7Cf8GRrz2A = HLKt4sa1j9hm.read_table(IAU50GMpkadz, comment=roI3spqORKae(ES5oEprVxulp(b'd'), chr(0b1011100 + 0o10) + chr(0b1100101) + chr(7354 - 7255) + chr(111) + '\144' + '\145')('\165' + chr(116) + chr(102) + '\x2d' + '\070'), names=[roI3spqORKae(ES5oEprVxulp(b'\x1f\xfe\x7fn'), '\x64' + chr(7627 - 7526) + chr(0b1100011) + '\x6f' + '\x64' + chr(101))(chr(0b1110101) + chr(116) + chr(0b1 + 0o145) + '\055' + '\070'), roI3spqORKae(ES5oEprVxulp(b'\n\xe2bw\xb7\x91'), '\144' + '\x65' + chr(1023 - 924) + chr(0b1101111) + chr(2267 - 2167) + '\x65')(chr(0b1011010 + 0o33) + chr(0b1001001 + 0o53) + chr(102) + '\x2d' + chr(56)), roI3spqORKae(ES5oEprVxulp(b'\x02\xdaSL\x9b\xbb\xc9\x8c'), '\x64' + '\x65' + chr(0b1100011) + chr(0b1010010 + 0o35) + '\x64' + chr(101))('\x75' + chr(0b1001100 + 0o50) + '\146' + chr(45) + chr(2479 - 2423)), roI3spqORKae(ES5oEprVxulp(b"\x03\xc9IK\x8c\xbc\xda\x9d\xc1\xb0'"), '\x64' + chr(0b1100101) + chr(0b111001 + 0o52) + chr(12316 - 12205) + chr(0b1100100) + chr(0b1100101))('\165' + chr(13139 - 13023) + chr(102) + chr(0b101101) + chr(0b111000))]) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'.\xd4tP\xc7\x99\xdd\xb6\x99\xb8;\xf8'), chr(0b11101 + 0o107) + chr(0b1001 + 0o134) + chr(0b1010000 + 0o23) + '\x6f' + chr(0b100101 + 0o77) + chr(8307 - 8206))(chr(117) + chr(116) + '\146' + '\x2d' + '\x38'))(roI3spqORKae(ES5oEprVxulp(b"\x00\xc9TM\x8c\xb4\xde\x8c\x88\xab!\xd2p\xc6\xda\xcd5l\x046I#\xd7!\r\xe3\xa5\xeeEn\xec'\x12e\xd3`k\xee\xa8\xc1"), chr(100) + chr(6184 - 6083) + chr(0b1100011) + '\x6f' + chr(100) + chr(0b1001011 + 0o32))(chr(10913 - 10796) + '\164' + chr(3394 - 3292) + chr(45) + chr(56))) _XdQFJpnzJor = qukBQYWf479y(HW7Cf8GRrz2A, EimwNJpLUnf_) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'.\xd4tP\xc7\x99\xdd\xb6\x99\xb8;\xf8'), chr(100) + chr(3988 - 3887) + chr(0b1100011) + '\157' + '\x64' + '\x65')(chr(117) + '\x74' + chr(103 - 1) + chr(1630 - 1585) + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'\x14\xcdLM\xde\xa7\xcf\x9a\xdd\xb3=\x99'), chr(100) + chr(9389 - 9288) + '\x63' + chr(2390 - 2279) + chr(454 - 354) + chr(5701 - 5600))('\165' + '\164' + chr(0b1100110) + chr(0b1110 + 0o37) + chr(1988 - 1932))) roI3spqORKae(_XdQFJpnzJor, roI3spqORKae(ES5oEprVxulp(b'\x01\xcd\nf\x8e\xb9\xe5\x8d\xed\xaf\x13\xdb'), '\144' + chr(0b101101 + 0o70) + '\143' + '\157' + chr(100) + '\145')(chr(117) + chr(4292 - 4176) + chr(102) + chr(1277 - 1232) + '\x38'))(Y4yM9BcfTCNq(qu5fsQlGSLfc(OHWDi_URd_WF), FCjoZuzS1Dg1, roI3spqORKae(ES5oEprVxulp(b'*\xc9WG\x8a\xb0'), chr(0b1001010 + 0o32) + chr(172 - 71) + '\x63' + '\157' + '\x64' + chr(0b10 + 0o143))(chr(0b1110101) + chr(0b1110100) + chr(0b110000 + 0o66) + chr(0b11 + 0o52) + chr(2308 - 2252)), roI3spqORKae(ES5oEprVxulp(b'4\xd9JX\x91\xa7\xde'), chr(100) + '\145' + '\x63' + '\157' + '\x64' + chr(0b11 + 0o142))('\x75' + chr(10435 - 10319) + '\146' + '\x2d' + '\070'), roI3spqORKae(ES5oEprVxulp(b'#\xcdNI'), chr(0b1100100) + chr(5709 - 5608) + chr(0b11001 + 0o112) + chr(0b1101111) + chr(100) + '\145')(chr(9768 - 9651) + chr(0b11110 + 0o126) + '\146' + chr(45) + chr(1790 - 1734)), roI3spqORKae(ES5oEprVxulp(b'*\xc9Nw\x97\xb1\xf5\x9a\xc0\xb0;\xc3<\xdc\xc1\xd6ir\x1b0T'), chr(0b1100100) + chr(101) + chr(99) + chr(0b1101111) + chr(7966 - 7866) + chr(0b10101 + 0o120))(chr(117) + chr(12085 - 11969) + '\x66' + '\055' + '\070')), force_ascii=nzTpIcepk0o8(chr(0b101101 + 0o3) + '\157' + chr(48), 0o10))
opencobra/memote
memote/experimental/essentiality.py
EssentialityExperiment.validate
def validate(self, model, checks=[]): """Use a defined schema to validate the medium table format.""" custom = [ check_partial(gene_id_check, frozenset(g.id for g in model.genes)) ] super(EssentialityExperiment, self).validate( model=model, checks=checks + custom)
python
def validate(self, model, checks=[]): """Use a defined schema to validate the medium table format.""" custom = [ check_partial(gene_id_check, frozenset(g.id for g in model.genes)) ] super(EssentialityExperiment, self).validate( model=model, checks=checks + custom)
[ "def", "validate", "(", "self", ",", "model", ",", "checks", "=", "[", "]", ")", ":", "custom", "=", "[", "check_partial", "(", "gene_id_check", ",", "frozenset", "(", "g", ".", "id", "for", "g", "in", "model", ".", "genes", ")", ")", "]", "super", "(", "EssentialityExperiment", ",", "self", ")", ".", "validate", "(", "model", "=", "model", ",", "checks", "=", "checks", "+", "custom", ")" ]
Use a defined schema to validate the medium table format.
[ "Use", "a", "defined", "schema", "to", "validate", "the", "medium", "table", "format", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/essentiality.py#L70-L76
train
Use a defined schema to validate the medium table format.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(0b1101111) + chr(672 - 623) + '\x31' + '\x33', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + chr(721 - 672) + chr(52) + chr(845 - 794), ord("\x08")), nzTpIcepk0o8(chr(675 - 627) + '\x6f' + chr(174 - 123) + '\x30' + chr(0b110001), 0b1000), nzTpIcepk0o8('\x30' + '\157' + '\x31' + '\x33', 0b1000), nzTpIcepk0o8('\060' + chr(0b110100 + 0o73) + chr(2374 - 2324) + chr(0b1000 + 0o56) + chr(1354 - 1305), 0o10), nzTpIcepk0o8(chr(1101 - 1053) + chr(6687 - 6576) + chr(0b110010) + '\x31' + '\066', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b1 + 0o60) + '\x33' + chr(48), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b11 + 0o154) + '\x31' + chr(0b101100 + 0o12) + '\x37', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b11001 + 0o32) + '\060', 0o10), nzTpIcepk0o8(chr(48) + chr(10648 - 10537) + chr(0b110001) + chr(1716 - 1668) + chr(0b100 + 0o56), 1675 - 1667), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\062' + chr(0b110011) + '\x32', 0o10), nzTpIcepk0o8(chr(0b10010 + 0o36) + chr(111) + chr(1709 - 1659) + '\067' + chr(0b11001 + 0o35), ord("\x08")), nzTpIcepk0o8(chr(239 - 191) + '\x6f' + chr(51) + '\062' + '\067', ord("\x08")), nzTpIcepk0o8(chr(0b100000 + 0o20) + chr(111) + '\x32' + '\060' + chr(272 - 223), ord("\x08")), nzTpIcepk0o8('\x30' + chr(1166 - 1055) + chr(756 - 707) + chr(0b110001) + '\064', 10630 - 10622), nzTpIcepk0o8('\060' + '\157' + chr(0b110110) + '\060', 5165 - 5157), nzTpIcepk0o8('\x30' + chr(0b1000101 + 0o52) + '\x37' + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b100000 + 0o20) + chr(111) + chr(0b11110 + 0o24) + chr(53) + '\x33', 7221 - 7213), nzTpIcepk0o8(chr(805 - 757) + chr(0b1101111) + '\x31' + chr(55) + '\x30', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1000 + 0o147) + chr(848 - 799) + '\063' + chr(49), 0o10), nzTpIcepk0o8('\060' + chr(111) + '\x31' + chr(49) + chr(0b1100 + 0o44), 31649 - 31641), nzTpIcepk0o8(chr(544 - 496) + chr(0b101001 + 0o106) + chr(0b110011) + '\065' + chr(1530 - 1476), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + '\062', ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(819 - 770) + chr(0b110110) + chr(0b111 + 0o52), 0b1000), nzTpIcepk0o8(chr(1349 - 1301) + '\157' + chr(0b10010 + 0o37) + chr(2177 - 2123) + chr(53), 0b1000), nzTpIcepk0o8(chr(0b100001 + 0o17) + '\x6f' + '\x32' + chr(0b0 + 0o67) + chr(0b110000), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(54) + '\065', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b11101 + 0o26) + '\063', ord("\x08")), nzTpIcepk0o8('\x30' + chr(3536 - 3425) + chr(0b100011 + 0o20) + '\x31' + chr(779 - 726), 0b1000), nzTpIcepk0o8('\060' + chr(11076 - 10965) + '\063' + chr(424 - 370) + chr(55), 32784 - 32776), nzTpIcepk0o8(chr(0b110000) + '\157' + '\067' + chr(1974 - 1919), 8), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110010) + chr(54) + chr(0b101 + 0o56), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b0 + 0o62) + chr(0b101110 + 0o5) + chr(1499 - 1446), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1100110 + 0o11) + '\063' + chr(0b110101), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(12042 - 11931) + chr(109 - 58) + chr(53) + chr(49), 0o10), nzTpIcepk0o8(chr(0b100100 + 0o14) + chr(9503 - 9392) + chr(1699 - 1650) + '\063' + '\065', 54405 - 54397), nzTpIcepk0o8(chr(0b110000) + chr(0b1000001 + 0o56) + chr(49) + '\x32' + '\060', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b1110 + 0o44) + chr(50) + chr(0b101100 + 0o12), 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\062' + '\067' + chr(55), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(50) + chr(54) + chr(55), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110001 + 0o4) + chr(0b110000), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'e'), '\x64' + '\145' + chr(99) + chr(111) + chr(0b100111 + 0o75) + chr(0b1100101))(chr(117) + chr(116) + chr(102) + '\055' + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def G40dcSccAFaB(hXMPsSrOQzbh, KW0sEfjlgNpM, NVULxIHSU5SZ=[]): Xbv6n7SNgicD = [V9tQAqFqMJAS(S4VzLIvVPlEK, PNaRkv8AjHWU((KQq7Z9J63zv1.maLnLg8O5zPT for KQq7Z9J63zv1 in KW0sEfjlgNpM.c3cw__Om03DA)))] roI3spqORKae(CO2YiXoIEhJY(jByYfMKV79vu, hXMPsSrOQzbh), roI3spqORKae(ES5oEprVxulp(b'\x0cW\xf1o\xd2\xdd;\x14Y\x04\xfb\xfc'), '\144' + chr(101) + chr(0b1100011) + '\157' + '\x64' + chr(0b101110 + 0o67))(chr(0b1100010 + 0o23) + '\x74' + '\x66' + '\x2d' + chr(0b111000)))(model=KW0sEfjlgNpM, checks=NVULxIHSU5SZ + Xbv6n7SNgicD)
opencobra/memote
memote/experimental/essentiality.py
EssentialityExperiment.evaluate
def evaluate(self, model): """Use the defined parameters to predict single gene essentiality.""" with model: if self.medium is not None: self.medium.apply(model) if self.objective is not None: model.objective = self.objective model.add_cons_vars(self.constraints) max_val = model.slim_optimize() essen = single_gene_deletion( model, gene_list=self.data["gene"], processes=1) essen["gene"] = [list(g)[0] for g in essen.index] essen.index = essen["gene"] essen["essential"] = (essen["growth"] < (max_val * 0.1)) \ | essen["growth"].isna() return essen
python
def evaluate(self, model): """Use the defined parameters to predict single gene essentiality.""" with model: if self.medium is not None: self.medium.apply(model) if self.objective is not None: model.objective = self.objective model.add_cons_vars(self.constraints) max_val = model.slim_optimize() essen = single_gene_deletion( model, gene_list=self.data["gene"], processes=1) essen["gene"] = [list(g)[0] for g in essen.index] essen.index = essen["gene"] essen["essential"] = (essen["growth"] < (max_val * 0.1)) \ | essen["growth"].isna() return essen
[ "def", "evaluate", "(", "self", ",", "model", ")", ":", "with", "model", ":", "if", "self", ".", "medium", "is", "not", "None", ":", "self", ".", "medium", ".", "apply", "(", "model", ")", "if", "self", ".", "objective", "is", "not", "None", ":", "model", ".", "objective", "=", "self", ".", "objective", "model", ".", "add_cons_vars", "(", "self", ".", "constraints", ")", "max_val", "=", "model", ".", "slim_optimize", "(", ")", "essen", "=", "single_gene_deletion", "(", "model", ",", "gene_list", "=", "self", ".", "data", "[", "\"gene\"", "]", ",", "processes", "=", "1", ")", "essen", "[", "\"gene\"", "]", "=", "[", "list", "(", "g", ")", "[", "0", "]", "for", "g", "in", "essen", ".", "index", "]", "essen", ".", "index", "=", "essen", "[", "\"gene\"", "]", "essen", "[", "\"essential\"", "]", "=", "(", "essen", "[", "\"growth\"", "]", "<", "(", "max_val", "*", "0.1", ")", ")", "|", "essen", "[", "\"growth\"", "]", ".", "isna", "(", ")", "return", "essen" ]
Use the defined parameters to predict single gene essentiality.
[ "Use", "the", "defined", "parameters", "to", "predict", "single", "gene", "essentiality", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/essentiality.py#L78-L93
train
Use the defined parameters to predict single gene essentiality.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(0b101001 + 0o106) + '\x32' + chr(0b110100) + '\x35', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b101110 + 0o101) + '\x33' + chr(728 - 678) + chr(2151 - 2103), 43940 - 43932), nzTpIcepk0o8(chr(0b10 + 0o56) + chr(0b1101111) + chr(49) + chr(52) + chr(0b110001), 39810 - 39802), nzTpIcepk0o8(chr(822 - 774) + '\157' + '\x32' + chr(1296 - 1244) + chr(0b10100 + 0o40), 28354 - 28346), nzTpIcepk0o8('\060' + chr(4195 - 4084) + '\061' + '\x37' + '\063', 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(50) + chr(51) + '\063', 0b1000), nzTpIcepk0o8('\060' + chr(7536 - 7425) + '\062' + chr(92 - 41) + chr(0b11011 + 0o25), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x31' + chr(0b100101 + 0o22) + chr(0b110011), 8), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b101011 + 0o6) + chr(738 - 684) + '\060', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1100111 + 0o10) + chr(0b110001) + chr(0b10001 + 0o43) + chr(53), 9784 - 9776), nzTpIcepk0o8(chr(0b10011 + 0o35) + '\x6f' + '\061' + chr(50) + chr(619 - 570), 0b1000), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(0b1101111) + chr(2013 - 1962) + '\x33' + chr(0b110100), ord("\x08")), nzTpIcepk0o8('\x30' + chr(7498 - 7387) + chr(0b1110 + 0o43) + '\064' + chr(0b110100), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(2174 - 2063) + chr(54) + chr(1407 - 1359), 0b1000), nzTpIcepk0o8('\060' + chr(2945 - 2834) + chr(2040 - 1989) + '\066' + '\x34', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1011010 + 0o25) + chr(960 - 909) + chr(0b100111 + 0o12) + chr(0b101101 + 0o3), 29637 - 29629), nzTpIcepk0o8(chr(48) + '\x6f' + '\x31' + chr(0b111 + 0o57) + chr(0b101000 + 0o13), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + '\067' + '\066', 0b1000), nzTpIcepk0o8(chr(951 - 903) + '\x6f' + chr(0b110001) + chr(54) + '\x34', ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110011) + '\x31', ord("\x08")), nzTpIcepk0o8(chr(1659 - 1611) + chr(0b100011 + 0o114) + '\061' + '\063', ord("\x08")), nzTpIcepk0o8(chr(1509 - 1461) + chr(111) + chr(49) + chr(54) + '\x37', 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(1126 - 1073) + '\066', 0o10), nzTpIcepk0o8(chr(0b101100 + 0o4) + chr(0b1 + 0o156) + chr(0b11001 + 0o32) + chr(0b110111) + chr(0b110001), 60965 - 60957), nzTpIcepk0o8('\060' + '\x6f' + chr(671 - 620) + '\x36' + chr(983 - 929), 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(50) + '\061' + chr(768 - 719), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(49) + '\x36' + chr(0b100101 + 0o16), 8), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(365 - 315) + chr(0b0 + 0o65), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(965 - 914) + chr(51) + chr(148 - 94), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(51) + chr(0b101111 + 0o10) + '\065', 0b1000), nzTpIcepk0o8('\060' + chr(0b1100001 + 0o16) + chr(0b110010) + chr(54) + '\065', 0b1000), nzTpIcepk0o8('\060' + chr(0b1111 + 0o140) + chr(49) + chr(0b110000) + '\064', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b111011 + 0o64) + chr(51) + '\066' + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(0b100111 + 0o11) + '\x6f' + '\x31' + chr(1934 - 1886) + chr(0b110010 + 0o3), 0o10), nzTpIcepk0o8(chr(0b101 + 0o53) + '\157' + chr(0b110011) + chr(0b110 + 0o52) + '\x34', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(520 - 471) + chr(55) + chr(2244 - 2191), 0o10), nzTpIcepk0o8(chr(952 - 904) + '\157' + '\061' + chr(1270 - 1221) + chr(568 - 514), 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\x32' + chr(1712 - 1661) + '\x37', 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(1255 - 1200) + chr(51), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(9244 - 9133) + chr(0b11011 + 0o27) + '\x30', 49485 - 49477)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1466 - 1418) + chr(0b1100101 + 0o12) + chr(1794 - 1741) + '\060', 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x8b'), chr(0b1100100) + chr(101) + chr(99) + '\157' + chr(0b1100100) + '\x65')(chr(0b1011000 + 0o35) + chr(10675 - 10559) + chr(0b1000111 + 0o37) + chr(0b1 + 0o54) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def SVKnebZUhpql(hXMPsSrOQzbh, KW0sEfjlgNpM): with KW0sEfjlgNpM: if roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\xf7\x9b\x13\xe68\xcf\xf5\x1eHQ\x12\x99'), chr(0b10000 + 0o124) + '\x65' + chr(99) + chr(0b1101111) + '\x64' + chr(101))(chr(117) + chr(0b1110100) + chr(2953 - 2851) + '\055' + chr(0b101111 + 0o11))) is not None: roI3spqORKae(hXMPsSrOQzbh.medium, roI3spqORKae(ES5oEprVxulp(b'\xc4\xa0\x11\xc8\x02'), chr(0b1100100) + chr(0b1011111 + 0o6) + chr(9264 - 9165) + chr(0b1101111) + chr(0b111010 + 0o52) + chr(0b1001111 + 0o26))(chr(137 - 20) + '\x74' + '\x66' + chr(45) + chr(56)))(KW0sEfjlgNpM) if roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\xcc\xb1-\x91\x01\xc9\xd1\x1f\x04\x01\x02\x93'), chr(0b1100100) + chr(0b1100101) + chr(99) + chr(111) + chr(0b1100100) + '\x65')(chr(0b11100 + 0o131) + chr(9766 - 9650) + chr(0b1100110) + '\x2d' + chr(1172 - 1116))) is not None: KW0sEfjlgNpM.iaL5zRIdtdSO = hXMPsSrOQzbh.iaL5zRIdtdSO roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xc4\xb4\x05\xfb\x18\xf4\xf6\x08/\x130\xae\x17'), chr(0b10011 + 0o121) + chr(4473 - 4372) + chr(99) + chr(0b1101111) + chr(0b1 + 0o143) + chr(0b1011010 + 0o13))(chr(0b1110101) + chr(116) + chr(0b1100110) + chr(45) + chr(0b10 + 0o66)))(roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\xf2\xa33\xfc.\xf4\xe2<5\x1c\x02\x96'), chr(0b1 + 0o143) + '\145' + chr(6922 - 6823) + chr(7789 - 7678) + chr(0b110100 + 0o60) + chr(0b1010100 + 0o21))(chr(5575 - 5458) + '\164' + '\x66' + chr(0b101101) + chr(1321 - 1265)))) geIOVpV6MO9b = KW0sEfjlgNpM.slim_optimize() RvOk70EmJIUM = ZIAHYJUvtE8v(KW0sEfjlgNpM, gene_list=hXMPsSrOQzbh.FfKOThdpoDTb[roI3spqORKae(ES5oEprVxulp(b'\xc2\xb5\x0f\xc1'), chr(1481 - 1381) + '\145' + chr(3835 - 3736) + chr(0b1101111) + '\x64' + chr(101))(chr(0b1110101) + '\164' + chr(0b101001 + 0o75) + chr(1289 - 1244) + '\x38')], processes=nzTpIcepk0o8('\060' + chr(0b100100 + 0o113) + '\061', 0b1000)) RvOk70EmJIUM[roI3spqORKae(ES5oEprVxulp(b'\xc2\xb5\x0f\xc1'), '\144' + chr(101) + '\143' + chr(111) + '\x64' + chr(0b10000 + 0o125))('\165' + chr(0b1110100) + chr(4464 - 4362) + chr(0b101101) + chr(0b111000))] = [H4NoA26ON7iG(KQq7Z9J63zv1)[nzTpIcepk0o8(chr(0b100001 + 0o17) + '\157' + '\060', ord("\x08"))] for KQq7Z9J63zv1 in RvOk70EmJIUM.ZpfN5tSLaZze] RvOk70EmJIUM.ZpfN5tSLaZze = RvOk70EmJIUM[roI3spqORKae(ES5oEprVxulp(b'\xc2\xb5\x0f\xc1'), '\x64' + chr(6829 - 6728) + chr(7700 - 7601) + '\157' + chr(0b10010 + 0o122) + chr(101))(chr(0b1110101) + chr(116) + chr(0b1100110) + chr(0b101101) + chr(0b111000))] RvOk70EmJIUM[roI3spqORKae(ES5oEprVxulp(b'\xc0\xa3\x12\xc1\x15\xef\xf1\x1a\x1c'), chr(3196 - 3096) + '\145' + chr(99) + chr(6098 - 5987) + chr(100) + '\145')('\165' + chr(8945 - 8829) + chr(0b111010 + 0o54) + chr(45) + '\x38')] = (RvOk70EmJIUM[roI3spqORKae(ES5oEprVxulp(b'\xc2\xa2\x0e\xd3\x0f\xf3'), chr(4878 - 4778) + '\x65' + chr(4285 - 4186) + '\157' + chr(100) + chr(101))(chr(117) + chr(0b1110100) + chr(102) + chr(1177 - 1132) + chr(0b111000))] < geIOVpV6MO9b * 0.1) | RvOk70EmJIUM[roI3spqORKae(ES5oEprVxulp(b'\xc2\xa2\x0e\xd3\x0f\xf3'), chr(100) + chr(0b1100101) + '\x63' + '\157' + chr(0b1100100) + chr(2049 - 1948))(chr(0b111100 + 0o71) + '\164' + '\x66' + chr(0b101101) + chr(0b111000))].isna() return RvOk70EmJIUM
opencobra/memote
memote/utils.py
register_with
def register_with(registry): """ Register a passed in object. Intended to be used as a decorator on model building functions with a ``dict`` as a registry. Examples -------- .. code-block:: python REGISTRY = dict() @register_with(REGISTRY) def build_empty(base): return base """ def decorator(func): registry[func.__name__] = func return func return decorator
python
def register_with(registry): """ Register a passed in object. Intended to be used as a decorator on model building functions with a ``dict`` as a registry. Examples -------- .. code-block:: python REGISTRY = dict() @register_with(REGISTRY) def build_empty(base): return base """ def decorator(func): registry[func.__name__] = func return func return decorator
[ "def", "register_with", "(", "registry", ")", ":", "def", "decorator", "(", "func", ")", ":", "registry", "[", "func", ".", "__name__", "]", "=", "func", "return", "func", "return", "decorator" ]
Register a passed in object. Intended to be used as a decorator on model building functions with a ``dict`` as a registry. Examples -------- .. code-block:: python REGISTRY = dict() @register_with(REGISTRY) def build_empty(base): return base
[ "Register", "a", "passed", "in", "object", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/utils.py#L48-L68
train
Register a passed in object with a registry.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(2134 - 2086) + chr(0b1101111) + chr(0b110000 + 0o2) + '\067' + chr(0b11101 + 0o24), 35699 - 35691), nzTpIcepk0o8('\x30' + chr(7138 - 7027) + chr(0b110001) + '\061' + chr(51), 18100 - 18092), nzTpIcepk0o8('\x30' + '\157' + chr(52) + chr(0b110100), 18600 - 18592), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(0b100100 + 0o113) + chr(1826 - 1773) + chr(0b10001 + 0o37), 62977 - 62969), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(50) + chr(1703 - 1648) + chr(55), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(2105 - 2054) + '\062' + chr(54), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x33' + chr(48) + chr(49), 0o10), nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(0b1101111) + '\x31' + '\x36' + '\061', 0o10), nzTpIcepk0o8(chr(2105 - 2057) + chr(0b1010010 + 0o35) + '\063' + chr(53) + '\x35', 42699 - 42691), nzTpIcepk0o8(chr(1709 - 1661) + chr(0b1101111) + '\x32' + '\063' + chr(1193 - 1144), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(10039 - 9928) + chr(1849 - 1800) + chr(0b1001 + 0o54) + chr(48), 13160 - 13152), nzTpIcepk0o8(chr(0b110000) + chr(0b1001011 + 0o44) + chr(0b110001) + '\063' + chr(0b1010 + 0o53), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + '\x32' + chr(51) + chr(0b110011), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101100 + 0o3) + '\062' + chr(0b110111) + chr(642 - 590), 0o10), nzTpIcepk0o8(chr(1593 - 1545) + chr(0b1101111) + chr(0b111 + 0o55) + chr(52), 8), nzTpIcepk0o8(chr(48) + '\x6f' + '\063' + chr(2175 - 2122) + chr(54), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110010) + chr(0b110 + 0o57) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b111110 + 0o61) + '\063' + '\x36' + chr(55), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\061' + chr(0b110110) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(0b100010 + 0o16) + '\x6f' + '\x32' + '\x35' + chr(0b1100 + 0o44), 0o10), nzTpIcepk0o8('\060' + chr(2524 - 2413) + chr(0b110010) + chr(48) + '\061', 0b1000), nzTpIcepk0o8(chr(48) + chr(1902 - 1791) + '\063' + '\x35' + chr(0b11011 + 0o31), 0b1000), nzTpIcepk0o8(chr(0b101001 + 0o7) + '\157' + chr(50) + chr(0b10000 + 0o44) + '\x34', ord("\x08")), nzTpIcepk0o8(chr(0b101111 + 0o1) + chr(111) + chr(0b110110) + '\061', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b1011 + 0o50) + '\x37' + '\060', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(2201 - 2150) + chr(0b1111 + 0o47) + '\x37', 8), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110010) + chr(2176 - 2123) + chr(49), 51054 - 51046), nzTpIcepk0o8('\x30' + chr(111) + chr(1280 - 1230) + chr(0b110000) + chr(0b110100), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + '\063' + chr(49) + chr(0b110110), 25064 - 25056), nzTpIcepk0o8(chr(747 - 699) + chr(111) + chr(1050 - 1000) + chr(181 - 127) + chr(0b10000 + 0o40), 0b1000), nzTpIcepk0o8(chr(0b11 + 0o55) + chr(111) + chr(0b10 + 0o64) + chr(0b1 + 0o63), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(51) + chr(0b101010 + 0o12) + '\x37', 0b1000), nzTpIcepk0o8(chr(0b101111 + 0o1) + '\157' + chr(0b1111 + 0o43) + chr(0b110001) + '\062', ord("\x08")), nzTpIcepk0o8(chr(1977 - 1929) + chr(111) + chr(190 - 139) + '\065' + '\063', 45653 - 45645), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(50) + chr(53) + chr(0b110001), 8), nzTpIcepk0o8(chr(0b10011 + 0o35) + chr(0b11101 + 0o122) + chr(97 - 47) + chr(52) + '\x35', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(2185 - 2135) + chr(0b10011 + 0o42) + '\062', 51531 - 51523), nzTpIcepk0o8(chr(0b110000) + chr(0b111000 + 0o67) + '\063' + chr(109 - 54) + chr(0b110001), 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(0b110101) + chr(967 - 915), 0o10), nzTpIcepk0o8(chr(48) + chr(0b10010 + 0o135) + chr(0b101010 + 0o7) + chr(0b110010) + chr(0b110010), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b101 + 0o53) + chr(0b1101111) + chr(2111 - 2058) + chr(337 - 289), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x97'), chr(0b1100100) + '\145' + chr(0b1100011) + chr(0b1010011 + 0o34) + '\144' + chr(101))(chr(0b100010 + 0o123) + chr(116) + chr(4548 - 4446) + chr(0b101101) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Y9S3jbWXogyx(nf89hVfLArBG): def Vstsm8DUicyG(h0klhChk4Vv6): nf89hVfLArBG[h0klhChk4Vv6.AYtDRlqeP0tq] = h0klhChk4Vv6 return h0klhChk4Vv6 return Vstsm8DUicyG
opencobra/memote
memote/utils.py
annotate
def annotate(title, format_type, message=None, data=None, metric=1.0): """ Annotate a test case with info that should be displayed in the reports. Parameters ---------- title : str A human-readable descriptive title of the test case. format_type : str A string that determines how the result data is formatted in the report. It is expected not to be None. * 'number' : 'data' is a single number which can be an integer or float and should be represented as such. * 'count' : 'data' is a list, set or tuple. Choosing 'count' will display the length of that list e.g. number of metabolites without formula. * 'percent' : Instead of 'data' the content of 'metric' ought to be displayed e.g. percentage of metabolites without charge. 'metric' is expected to be a floating point number. * 'raw' : 'data' is ought to be displayed "as is" without formatting. This option is appropriate for single strings or a boolean output. message : str A short written explanation that states and possibly explains the test result. data Raw data which the test case generates and assesses. Can be of the following types: list, set, tuple, string, float, integer, and boolean. metric: float A value x in the range of 0 <= x <= 1 which represents the fraction of 'data' to the total in the model. For example, if 'data' are all metabolites without formula, 'metric' should be the fraction of metabolites without formula from the total of metabolites in the model. Returns ------- function The decorated function, now extended by the attribute 'annotation'. Notes ----- Adds "annotation" attribute to the function object, which stores values for predefined keys as a dictionary. """ if format_type not in TYPES: raise ValueError( "Invalid type. Expected one of: {}.".format(", ".join(TYPES))) def decorator(func): func.annotation = dict( title=title, summary=extended_summary(func), message=message, data=data, format_type=format_type, metric=metric) return func return decorator
python
def annotate(title, format_type, message=None, data=None, metric=1.0): """ Annotate a test case with info that should be displayed in the reports. Parameters ---------- title : str A human-readable descriptive title of the test case. format_type : str A string that determines how the result data is formatted in the report. It is expected not to be None. * 'number' : 'data' is a single number which can be an integer or float and should be represented as such. * 'count' : 'data' is a list, set or tuple. Choosing 'count' will display the length of that list e.g. number of metabolites without formula. * 'percent' : Instead of 'data' the content of 'metric' ought to be displayed e.g. percentage of metabolites without charge. 'metric' is expected to be a floating point number. * 'raw' : 'data' is ought to be displayed "as is" without formatting. This option is appropriate for single strings or a boolean output. message : str A short written explanation that states and possibly explains the test result. data Raw data which the test case generates and assesses. Can be of the following types: list, set, tuple, string, float, integer, and boolean. metric: float A value x in the range of 0 <= x <= 1 which represents the fraction of 'data' to the total in the model. For example, if 'data' are all metabolites without formula, 'metric' should be the fraction of metabolites without formula from the total of metabolites in the model. Returns ------- function The decorated function, now extended by the attribute 'annotation'. Notes ----- Adds "annotation" attribute to the function object, which stores values for predefined keys as a dictionary. """ if format_type not in TYPES: raise ValueError( "Invalid type. Expected one of: {}.".format(", ".join(TYPES))) def decorator(func): func.annotation = dict( title=title, summary=extended_summary(func), message=message, data=data, format_type=format_type, metric=metric) return func return decorator
[ "def", "annotate", "(", "title", ",", "format_type", ",", "message", "=", "None", ",", "data", "=", "None", ",", "metric", "=", "1.0", ")", ":", "if", "format_type", "not", "in", "TYPES", ":", "raise", "ValueError", "(", "\"Invalid type. Expected one of: {}.\"", ".", "format", "(", "\", \"", ".", "join", "(", "TYPES", ")", ")", ")", "def", "decorator", "(", "func", ")", ":", "func", ".", "annotation", "=", "dict", "(", "title", "=", "title", ",", "summary", "=", "extended_summary", "(", "func", ")", ",", "message", "=", "message", ",", "data", "=", "data", ",", "format_type", "=", "format_type", ",", "metric", "=", "metric", ")", "return", "func", "return", "decorator" ]
Annotate a test case with info that should be displayed in the reports. Parameters ---------- title : str A human-readable descriptive title of the test case. format_type : str A string that determines how the result data is formatted in the report. It is expected not to be None. * 'number' : 'data' is a single number which can be an integer or float and should be represented as such. * 'count' : 'data' is a list, set or tuple. Choosing 'count' will display the length of that list e.g. number of metabolites without formula. * 'percent' : Instead of 'data' the content of 'metric' ought to be displayed e.g. percentage of metabolites without charge. 'metric' is expected to be a floating point number. * 'raw' : 'data' is ought to be displayed "as is" without formatting. This option is appropriate for single strings or a boolean output. message : str A short written explanation that states and possibly explains the test result. data Raw data which the test case generates and assesses. Can be of the following types: list, set, tuple, string, float, integer, and boolean. metric: float A value x in the range of 0 <= x <= 1 which represents the fraction of 'data' to the total in the model. For example, if 'data' are all metabolites without formula, 'metric' should be the fraction of metabolites without formula from the total of metabolites in the model. Returns ------- function The decorated function, now extended by the attribute 'annotation'. Notes ----- Adds "annotation" attribute to the function object, which stores values for predefined keys as a dictionary.
[ "Annotate", "a", "test", "case", "with", "info", "that", "should", "be", "displayed", "in", "the", "reports", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/utils.py#L71-L130
train
Annotate a test case with info that should be displayed in the reports.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b10 + 0o56) + '\157' + chr(0b110111) + '\x36', 0b1000), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(111) + '\x31' + chr(0b1 + 0o63), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(50) + '\x31' + chr(53), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(49) + '\x37' + chr(0b110000), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(1415 - 1365) + chr(0b110011 + 0o3) + chr(51), 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\x32' + '\061' + chr(2670 - 2617), 8), nzTpIcepk0o8('\060' + '\x6f' + chr(0b100101 + 0o14) + chr(2279 - 2228) + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(0b101010 + 0o6) + chr(8943 - 8832) + chr(0b1010 + 0o55) + '\x36', 8), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b1000100 + 0o53) + '\x37', ord("\x08")), nzTpIcepk0o8(chr(0b11101 + 0o23) + chr(0b1000110 + 0o51) + '\062' + chr(76 - 23) + '\062', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1010010 + 0o35) + '\x33' + chr(51) + chr(1639 - 1591), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x33' + '\064' + chr(0b101110 + 0o11), 19694 - 19686), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110100) + '\063', 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + '\063' + chr(49) + chr(0b10110 + 0o37), 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\062' + chr(401 - 347) + '\x32', 0b1000), nzTpIcepk0o8(chr(0b1011 + 0o45) + '\x6f' + '\061' + chr(2206 - 2157) + chr(53), 0o10), nzTpIcepk0o8('\060' + '\157' + '\x33' + chr(1118 - 1065) + chr(0b110001 + 0o4), 0b1000), nzTpIcepk0o8(chr(0b100110 + 0o12) + '\157' + chr(0b10010 + 0o43) + '\x30', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110011) + chr(0b1000 + 0o50) + '\063', 0o10), nzTpIcepk0o8(chr(1625 - 1577) + chr(0b111010 + 0o65) + chr(0b110110) + chr(52), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(53) + chr(1908 - 1854), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(245 - 194) + chr(1293 - 1238) + chr(54), 0b1000), nzTpIcepk0o8('\060' + chr(7002 - 6891) + chr(0b101011 + 0o6) + chr(0b10101 + 0o34) + chr(0b101010 + 0o12), 16972 - 16964), nzTpIcepk0o8(chr(2287 - 2239) + chr(111) + '\061' + chr(0b110001) + '\x32', 16133 - 16125), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(0b101 + 0o152) + chr(51) + chr(415 - 362) + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(0b10 + 0o56) + chr(0b1101111) + chr(49) + '\061' + chr(52), 8), nzTpIcepk0o8(chr(2278 - 2230) + chr(0b1101111) + chr(0b110001) + chr(51) + '\x36', 0o10), nzTpIcepk0o8(chr(657 - 609) + '\157' + chr(582 - 531) + '\x35' + '\x35', 8), nzTpIcepk0o8('\060' + chr(4244 - 4133) + '\x31' + '\x35', 0o10), nzTpIcepk0o8(chr(1959 - 1911) + '\157' + chr(1212 - 1161) + chr(2135 - 2083) + chr(49), ord("\x08")), nzTpIcepk0o8(chr(0b1000 + 0o50) + chr(0b1010100 + 0o33) + '\x32' + chr(0b110100) + chr(616 - 565), ord("\x08")), nzTpIcepk0o8(chr(920 - 872) + chr(111) + chr(0b110011) + chr(0b0 + 0o61) + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(0b10000 + 0o42) + chr(1536 - 1485) + chr(48), 49255 - 49247), nzTpIcepk0o8('\x30' + chr(111) + chr(0b100011 + 0o16) + chr(52), 8), nzTpIcepk0o8(chr(1254 - 1206) + chr(3647 - 3536) + chr(0b10110 + 0o34), ord("\x08")), nzTpIcepk0o8(chr(0b11110 + 0o22) + chr(0b1101111) + chr(0b110001) + '\065' + chr(49), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b1100 + 0o45) + '\x33' + chr(0b11 + 0o61), 11242 - 11234), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b11001 + 0o33) + chr(2751 - 2698), ord("\x08")), nzTpIcepk0o8(chr(0b11110 + 0o22) + chr(2722 - 2611) + '\x32' + '\062' + chr(0b110000 + 0o5), 0b1000), nzTpIcepk0o8(chr(334 - 286) + chr(111) + chr(2208 - 2157) + '\x30' + chr(48), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + '\x6f' + chr(1265 - 1212) + chr(48), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x10'), chr(6652 - 6552) + '\145' + chr(99) + chr(0b1000101 + 0o52) + '\144' + '\x65')('\165' + chr(8569 - 8453) + chr(6781 - 6679) + chr(1872 - 1827) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def uxOnAIchWrSA(OO0tRW9aj_xh, m9dC1OBiraUq, FksNMH1w_ns6=None, FfKOThdpoDTb=None, ZXcxKHlxi_pV=1.0): if m9dC1OBiraUq not in L9L7f35N730F: raise WbNHlDKpyPtQ(roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'wb\xfb\x19\xdf\xe4;\x1es\xd3\xa8\x82\r\xed\xf75\x9dM\xa0@K\x9al%\x80)~\x82k\xdb\x83\xb5\xe5"'), chr(100) + '\145' + '\x63' + chr(0b1101111) + '\144' + chr(101))(chr(0b1110101) + chr(0b1110100 + 0o0) + chr(0b1100110) + chr(0b101101) + chr(0b111 + 0o61)), roI3spqORKae(ES5oEprVxulp(b'O?\xbe3\xf4\xbe9QV\xf5\x9b\xad'), '\144' + chr(0b1100101) + chr(5419 - 5320) + '\157' + '\x64' + '\145')(chr(0b1110101) + chr(0b1101100 + 0o10) + '\146' + chr(45) + '\070'))(roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'\x12,'), '\x64' + chr(5526 - 5425) + chr(99) + '\157' + chr(0b1100100) + '\x65')(chr(117) + '\x74' + '\146' + chr(0b11101 + 0o20) + chr(0b101111 + 0o11)), roI3spqORKae(ES5oEprVxulp(b'g8\xf45\x8a\xcf<XS\xe9\x96\x96'), chr(6849 - 6749) + chr(101) + '\x63' + chr(0b1100011 + 0o14) + chr(0b1100100) + chr(101))('\x75' + chr(0b1110100) + chr(6802 - 6700) + '\x2d' + chr(56)))(L9L7f35N730F))) def Vstsm8DUicyG(h0klhChk4Vv6): h0klhChk4Vv6.bKP0IesFF4Pq = znjnJWK64FDT(title=OO0tRW9aj_xh, summary=UlI8yFemgULe(h0klhChk4Vv6), message=FksNMH1w_ns6, data=FfKOThdpoDTb, format_type=m9dC1OBiraUq, metric=ZXcxKHlxi_pV) return h0klhChk4Vv6 return Vstsm8DUicyG
opencobra/memote
memote/utils.py
truncate
def truncate(sequence): """ Create a potentially shortened text display of a list. Parameters ---------- sequence : list An indexable sequence of elements. Returns ------- str The list as a formatted string. """ if len(sequence) > LIST_SLICE: return ", ".join(sequence[:LIST_SLICE] + ["..."]) else: return ", ".join(sequence)
python
def truncate(sequence): """ Create a potentially shortened text display of a list. Parameters ---------- sequence : list An indexable sequence of elements. Returns ------- str The list as a formatted string. """ if len(sequence) > LIST_SLICE: return ", ".join(sequence[:LIST_SLICE] + ["..."]) else: return ", ".join(sequence)
[ "def", "truncate", "(", "sequence", ")", ":", "if", "len", "(", "sequence", ")", ">", "LIST_SLICE", ":", "return", "\", \"", ".", "join", "(", "sequence", "[", ":", "LIST_SLICE", "]", "+", "[", "\"...\"", "]", ")", "else", ":", "return", "\", \"", ".", "join", "(", "sequence", ")" ]
Create a potentially shortened text display of a list. Parameters ---------- sequence : list An indexable sequence of elements. Returns ------- str The list as a formatted string.
[ "Create", "a", "potentially", "shortened", "text", "display", "of", "a", "list", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/utils.py#L152-L170
train
Returns a potentially shortened text display of a list.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + '\x6f' + chr(2071 - 2020) + chr(1573 - 1520) + '\067', ord("\x08")), nzTpIcepk0o8(chr(1916 - 1868) + chr(0b1100001 + 0o16) + chr(592 - 541) + chr(48) + '\x30', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(51) + '\062' + chr(0b101011 + 0o10), 24719 - 24711), nzTpIcepk0o8(chr(48) + '\x6f' + chr(50) + '\x34' + '\064', ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + '\062' + chr(52) + chr(54), 0o10), nzTpIcepk0o8(chr(2168 - 2120) + chr(0b1000 + 0o147) + chr(1647 - 1595), 65306 - 65298), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b1011 + 0o46) + chr(852 - 804) + '\x36', 58194 - 58186), nzTpIcepk0o8('\060' + chr(5644 - 5533) + chr(0b110001) + '\065' + chr(0b110110), 0o10), nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(111) + '\x32' + chr(53) + '\063', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + '\x33' + chr(517 - 469) + chr(0b101 + 0o53), 8), nzTpIcepk0o8(chr(859 - 811) + chr(7561 - 7450) + chr(2128 - 2079) + chr(0b110001) + chr(55), 37716 - 37708), nzTpIcepk0o8('\060' + chr(0b111010 + 0o65) + chr(2633 - 2578) + '\065', 0o10), nzTpIcepk0o8(chr(927 - 879) + chr(0b1011 + 0o144) + '\062' + '\063', 0b1000), nzTpIcepk0o8(chr(0b1011 + 0o45) + chr(11614 - 11503) + chr(0b110010) + chr(1204 - 1156) + '\x35', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(460 - 411) + chr(48) + '\x31', ord("\x08")), nzTpIcepk0o8(chr(0b0 + 0o60) + '\x6f' + chr(1319 - 1268) + '\x33' + '\061', 28147 - 28139), nzTpIcepk0o8('\060' + '\x6f' + chr(0b1001 + 0o51) + chr(503 - 454) + '\060', 0o10), nzTpIcepk0o8(chr(0b11111 + 0o21) + chr(11683 - 11572) + chr(0b110111) + chr(51), 55269 - 55261), nzTpIcepk0o8(chr(477 - 429) + chr(8384 - 8273) + chr(2190 - 2139) + chr(0b110101) + '\063', 0o10), nzTpIcepk0o8(chr(1224 - 1176) + chr(0b11100 + 0o123) + chr(50) + '\061' + chr(0b110000), 8), nzTpIcepk0o8('\060' + chr(0b1001111 + 0o40) + '\062' + chr(1316 - 1263) + chr(0b11001 + 0o33), 61581 - 61573), nzTpIcepk0o8(chr(0b101111 + 0o1) + chr(111) + chr(0b10001 + 0o42) + chr(0b10111 + 0o34) + chr(1752 - 1702), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x33' + '\065' + chr(55), 8), nzTpIcepk0o8(chr(960 - 912) + chr(0b1101111) + chr(53) + chr(0b10011 + 0o37), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b11111 + 0o23) + chr(2140 - 2086) + chr(2542 - 2487), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(2055 - 2005) + '\066' + chr(51), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x31' + chr(1820 - 1770) + chr(54), 34539 - 34531), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x33' + chr(0b101111 + 0o10) + '\x33', 0b1000), nzTpIcepk0o8('\060' + chr(0b1011111 + 0o20) + chr(489 - 440) + chr(51) + '\x33', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1011001 + 0o26) + chr(294 - 240) + chr(0b110110), 28548 - 28540), nzTpIcepk0o8(chr(642 - 594) + chr(0b101100 + 0o103) + chr(1005 - 954) + chr(1638 - 1587) + chr(0b101111 + 0o10), 0o10), nzTpIcepk0o8(chr(0b10110 + 0o32) + '\x6f' + chr(1574 - 1524) + chr(0b110110) + chr(2092 - 2038), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(51) + '\x34' + chr(0b110010), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(2131 - 2080) + '\x31' + '\060', 0b1000), nzTpIcepk0o8(chr(2055 - 2007) + '\157' + chr(0b100111 + 0o13) + chr(0b110000) + chr(0b11111 + 0o30), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001) + chr(2150 - 2095) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(965 - 917) + '\157' + chr(50) + '\x36' + chr(0b110101), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(12165 - 12054) + '\x31' + chr(0b110010) + chr(1505 - 1455), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110010) + chr(2448 - 2397) + chr(1463 - 1414), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(49) + chr(0b110111) + chr(0b1100 + 0o47), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1841 - 1793) + chr(0b1010010 + 0o35) + '\x35' + '\060', 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xc1'), chr(0b1100100) + chr(7682 - 7581) + '\143' + chr(0b101101 + 0o102) + chr(0b1100100) + '\145')('\165' + chr(10401 - 10285) + chr(10272 - 10170) + '\x2d' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def sV5Scs_Nj_uU(AaFeo0lw34C3): if ftfygxgFas5X(AaFeo0lw34C3) > VKA_bf3Az8Is: return roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'\xc3\xe0'), '\144' + chr(7901 - 7800) + chr(0b1100011) + chr(0b1101111) + chr(0b1001 + 0o133) + chr(7508 - 7407))(chr(0b1001100 + 0o51) + '\x74' + '\x66' + '\x2d' + chr(1930 - 1874)), roI3spqORKae(ES5oEprVxulp(b'\xb6\xf4\xaa\xe9\x9fF%\x08\xff\x83\x01L'), chr(100) + chr(0b1011000 + 0o15) + chr(0b1100011) + chr(0b1101111) + chr(0b1100100) + '\x65')('\x75' + '\164' + chr(102) + '\x2d' + '\070'))(AaFeo0lw34C3[:VKA_bf3Az8Is] + [roI3spqORKae(ES5oEprVxulp(b'\xc1\xee\xfd'), chr(100) + '\145' + chr(0b1100011) + chr(0b1101111) + chr(100) + chr(0b1100101))(chr(2041 - 1924) + chr(116) + chr(5811 - 5709) + chr(1250 - 1205) + chr(0b111000))]) else: return roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'\xc3\xe0'), chr(100) + chr(0b1011110 + 0o7) + chr(99) + chr(0b1000111 + 0o50) + chr(0b1100100) + chr(0b1011101 + 0o10))(chr(117) + chr(116) + chr(0b1011000 + 0o16) + chr(0b101101) + chr(0b110011 + 0o5)), roI3spqORKae(ES5oEprVxulp(b'\xb6\xf4\xaa\xe9\x9fF%\x08\xff\x83\x01L'), chr(0b1100100) + '\145' + chr(0b1001101 + 0o26) + chr(0b101101 + 0o102) + chr(9892 - 9792) + chr(0b0 + 0o145))(chr(0b1100101 + 0o20) + chr(0b1110100) + chr(8289 - 8187) + chr(45) + '\070'))(AaFeo0lw34C3)
opencobra/memote
memote/utils.py
log_json_incompatible_types
def log_json_incompatible_types(obj): """ Log types that are not JSON compatible. Explore a nested dictionary structure and log types that are not JSON compatible. Parameters ---------- obj : dict A potentially nested dictionary. """ keys_to_explore = list(obj) while len(keys_to_explore) > 0: key = keys_to_explore.pop() if not isinstance(key, str): LOGGER.info(type(key)) value = obj[key] if isinstance(value, dict): LOGGER.info("%s:", key) log_json_incompatible_types(value) elif not isinstance(value, JSON_TYPES): LOGGER.info("%s: %s", key, type(value)) elif isinstance(value, (int, float)) and not isfinite(value): LOGGER.info("%s: %f", key, value)
python
def log_json_incompatible_types(obj): """ Log types that are not JSON compatible. Explore a nested dictionary structure and log types that are not JSON compatible. Parameters ---------- obj : dict A potentially nested dictionary. """ keys_to_explore = list(obj) while len(keys_to_explore) > 0: key = keys_to_explore.pop() if not isinstance(key, str): LOGGER.info(type(key)) value = obj[key] if isinstance(value, dict): LOGGER.info("%s:", key) log_json_incompatible_types(value) elif not isinstance(value, JSON_TYPES): LOGGER.info("%s: %s", key, type(value)) elif isinstance(value, (int, float)) and not isfinite(value): LOGGER.info("%s: %f", key, value)
[ "def", "log_json_incompatible_types", "(", "obj", ")", ":", "keys_to_explore", "=", "list", "(", "obj", ")", "while", "len", "(", "keys_to_explore", ")", ">", "0", ":", "key", "=", "keys_to_explore", ".", "pop", "(", ")", "if", "not", "isinstance", "(", "key", ",", "str", ")", ":", "LOGGER", ".", "info", "(", "type", "(", "key", ")", ")", "value", "=", "obj", "[", "key", "]", "if", "isinstance", "(", "value", ",", "dict", ")", ":", "LOGGER", ".", "info", "(", "\"%s:\"", ",", "key", ")", "log_json_incompatible_types", "(", "value", ")", "elif", "not", "isinstance", "(", "value", ",", "JSON_TYPES", ")", ":", "LOGGER", ".", "info", "(", "\"%s: %s\"", ",", "key", ",", "type", "(", "value", ")", ")", "elif", "isinstance", "(", "value", ",", "(", "int", ",", "float", ")", ")", "and", "not", "isfinite", "(", "value", ")", ":", "LOGGER", ".", "info", "(", "\"%s: %f\"", ",", "key", ",", "value", ")" ]
Log types that are not JSON compatible. Explore a nested dictionary structure and log types that are not JSON compatible. Parameters ---------- obj : dict A potentially nested dictionary.
[ "Log", "types", "that", "are", "not", "JSON", "compatible", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/utils.py#L173-L198
train
Recursively log types that are not JSON compatible.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + '\157' + chr(703 - 652) + '\063' + chr(50), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1010000 + 0o37) + chr(374 - 325) + '\x37' + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(893 - 782) + chr(0b10110 + 0o34) + chr(1329 - 1277) + '\x32', 0o10), nzTpIcepk0o8(chr(2291 - 2243) + '\x6f' + chr(0b110010) + '\x37' + chr(0b11100 + 0o33), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\x31' + '\x34' + chr(0b101101 + 0o7), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + '\x33' + chr(52) + chr(0b1100 + 0o44), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(3021 - 2910) + '\063' + chr(50) + '\x35', ord("\x08")), nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(111) + '\x33', 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(1207 - 1158) + chr(1863 - 1808) + chr(0b11100 + 0o32), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\x37' + '\061', 0o10), nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(8246 - 8135) + chr(0b110011) + chr(0b110011) + '\060', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110010) + '\060' + chr(51), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(52), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(1214 - 1163) + '\064' + chr(48), 8), nzTpIcepk0o8(chr(48) + '\157' + chr(1781 - 1729) + chr(1896 - 1845), 0o10), nzTpIcepk0o8(chr(0b100110 + 0o12) + chr(0b100001 + 0o116) + chr(0b10111 + 0o34) + chr(51), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(51) + '\x34' + chr(0b1 + 0o66), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(11852 - 11741) + chr(0b110001) + chr(2031 - 1979) + chr(48), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1010100 + 0o33) + chr(0b100 + 0o57) + chr(780 - 727) + '\065', 23686 - 23678), nzTpIcepk0o8(chr(0b110000) + chr(1543 - 1432) + chr(0b110 + 0o55) + chr(0b110101) + chr(0b110001), 4511 - 4503), nzTpIcepk0o8('\060' + chr(4158 - 4047) + '\063' + chr(2754 - 2700) + chr(50), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(51) + '\061' + chr(48), ord("\x08")), nzTpIcepk0o8(chr(0b11010 + 0o26) + '\157' + chr(0b110001) + '\x34' + '\065', 0b1000), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(0b1101111) + chr(1742 - 1693) + '\066' + chr(1203 - 1154), 5941 - 5933), nzTpIcepk0o8(chr(0b11100 + 0o24) + chr(0b110010 + 0o75) + chr(2491 - 2441) + chr(0b10110 + 0o40) + '\062', 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(51) + '\063', 8), nzTpIcepk0o8(chr(0b11011 + 0o25) + chr(5253 - 5142) + chr(0b110011) + chr(0b110010) + '\x31', ord("\x08")), nzTpIcepk0o8(chr(1485 - 1437) + chr(0b101001 + 0o106) + chr(51) + chr(0b110001) + '\060', 8), nzTpIcepk0o8(chr(1791 - 1743) + '\157' + chr(0b110111) + '\067', ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(1778 - 1728), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1110 + 0o141) + chr(2409 - 2355) + chr(53), 0b1000), nzTpIcepk0o8('\x30' + chr(0b10001 + 0o136) + chr(1222 - 1171) + chr(0b111 + 0o56) + chr(2109 - 2055), 26984 - 26976), nzTpIcepk0o8(chr(0b110000) + chr(6164 - 6053) + chr(746 - 697) + '\067' + chr(48), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x33' + chr(49) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(610 - 562) + '\157' + chr(0b110011) + '\062' + '\066', 0b1000), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(10348 - 10237) + chr(55) + chr(0b110100), 0o10), nzTpIcepk0o8('\060' + '\157' + '\062' + chr(298 - 244) + '\x35', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b101110 + 0o101) + chr(50) + chr(52) + chr(0b100000 + 0o24), 24102 - 24094), nzTpIcepk0o8(chr(1163 - 1115) + chr(111) + chr(50) + chr(0b110011) + '\x31', 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(0b110010) + chr(0b100101 + 0o21) + '\060', 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110101) + '\x30', 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xf4'), chr(6600 - 6500) + chr(4408 - 4307) + '\x63' + chr(111) + chr(0b10110 + 0o116) + chr(0b1100101))('\x75' + chr(0b1011101 + 0o27) + chr(0b1100110) + chr(0b101101) + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def aIJeb4Um0VzR(kIMfkyypPTcC): lF9STeElSLaK = H4NoA26ON7iG(kIMfkyypPTcC) while ftfygxgFas5X(lF9STeElSLaK) > nzTpIcepk0o8('\060' + chr(0b110000 + 0o77) + chr(0b11110 + 0o22), 32669 - 32661): QYodcsDtoGq7 = lF9STeElSLaK.uC_Yoybx7J0I() if not suIjIS24Zkqw(QYodcsDtoGq7, N9zlRy29S1SS): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xb3\x07\xec\xc7]\xac\xa2\\O^\xaa\xcc'), chr(0b1000001 + 0o43) + chr(101) + chr(99) + chr(0b1010000 + 0o37) + chr(0b10011 + 0o121) + chr(6455 - 6354))(chr(117) + chr(0b1110100) + '\146' + '\055' + chr(0b10110 + 0o42)))(MJ07XsN5uFgW(QYodcsDtoGq7)) uV9iBiw0y_Mp = kIMfkyypPTcC[QYodcsDtoGq7] if suIjIS24Zkqw(uV9iBiw0y_Mp, znjnJWK64FDT): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xb3\x07\xec\xc7]\xac\xa2\\O^\xaa\xcc'), '\x64' + chr(0b1100101) + chr(0b1100011) + chr(0b1101111) + chr(0b1100100) + '\x65')('\x75' + chr(11405 - 11289) + chr(9306 - 9204) + '\x2d' + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'\xff\x0c\x98'), chr(100) + chr(0b1100101) + '\x63' + '\x6f' + '\x64' + chr(9036 - 8935))(chr(117) + chr(116) + chr(102) + '\055' + chr(0b10 + 0o66)), QYodcsDtoGq7) aIJeb4Um0VzR(uV9iBiw0y_Mp) elif not suIjIS24Zkqw(uV9iBiw0y_Mp, uGZGLorBpezs): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xb3\x07\xec\xc7]\xac\xa2\\O^\xaa\xcc'), '\144' + '\145' + chr(0b100000 + 0o103) + '\157' + chr(0b1010110 + 0o16) + '\145')(chr(117) + chr(0b1110100) + '\146' + '\x2d' + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'\xff\x0c\x98\x9fA\x93'), chr(8633 - 8533) + chr(101) + chr(0b1100011) + chr(11062 - 10951) + chr(0b100101 + 0o77) + chr(0b1100101))(chr(117) + chr(0b1110100) + chr(990 - 888) + '\055' + '\x38'), QYodcsDtoGq7, MJ07XsN5uFgW(uV9iBiw0y_Mp)) elif suIjIS24Zkqw(uV9iBiw0y_Mp, (nzTpIcepk0o8, jLW6pRf2DSRk)) and (not AWxpWpGwxU15(uV9iBiw0y_Mp)): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xb3\x07\xec\xc7]\xac\xa2\\O^\xaa\xcc'), chr(2046 - 1946) + chr(8947 - 8846) + chr(99) + chr(111) + chr(8580 - 8480) + '\x65')('\x75' + chr(116) + chr(0b110 + 0o140) + '\055' + '\070'))(roI3spqORKae(ES5oEprVxulp(b'\xff\x0c\x98\x9fA\x86'), chr(100) + chr(373 - 272) + chr(6027 - 5928) + chr(0b1101111) + '\x64' + chr(4561 - 4460))('\165' + chr(10285 - 10169) + chr(102) + chr(45) + chr(0b110111 + 0o1)), QYodcsDtoGq7, uV9iBiw0y_Mp)
opencobra/memote
memote/utils.py
jsonify
def jsonify(obj, pretty=False): """ Turn a nested object into a (compressed) JSON string. Parameters ---------- obj : dict Any kind of dictionary structure. pretty : bool, optional Whether to format the resulting JSON in a more legible way ( default False). """ if pretty: params = dict(sort_keys=True, indent=2, allow_nan=False, separators=(",", ": "), ensure_ascii=False) else: params = dict(sort_keys=False, indent=None, allow_nan=False, separators=(",", ":"), ensure_ascii=False) try: return json.dumps(obj, **params) except (TypeError, ValueError) as error: LOGGER.critical( "The memote result structure is incompatible with the JSON " "standard.") log_json_incompatible_types(obj) raise_with_traceback(error)
python
def jsonify(obj, pretty=False): """ Turn a nested object into a (compressed) JSON string. Parameters ---------- obj : dict Any kind of dictionary structure. pretty : bool, optional Whether to format the resulting JSON in a more legible way ( default False). """ if pretty: params = dict(sort_keys=True, indent=2, allow_nan=False, separators=(",", ": "), ensure_ascii=False) else: params = dict(sort_keys=False, indent=None, allow_nan=False, separators=(",", ":"), ensure_ascii=False) try: return json.dumps(obj, **params) except (TypeError, ValueError) as error: LOGGER.critical( "The memote result structure is incompatible with the JSON " "standard.") log_json_incompatible_types(obj) raise_with_traceback(error)
[ "def", "jsonify", "(", "obj", ",", "pretty", "=", "False", ")", ":", "if", "pretty", ":", "params", "=", "dict", "(", "sort_keys", "=", "True", ",", "indent", "=", "2", ",", "allow_nan", "=", "False", ",", "separators", "=", "(", "\",\"", ",", "\": \"", ")", ",", "ensure_ascii", "=", "False", ")", "else", ":", "params", "=", "dict", "(", "sort_keys", "=", "False", ",", "indent", "=", "None", ",", "allow_nan", "=", "False", ",", "separators", "=", "(", "\",\"", ",", "\":\"", ")", ",", "ensure_ascii", "=", "False", ")", "try", ":", "return", "json", ".", "dumps", "(", "obj", ",", "*", "*", "params", ")", "except", "(", "TypeError", ",", "ValueError", ")", "as", "error", ":", "LOGGER", ".", "critical", "(", "\"The memote result structure is incompatible with the JSON \"", "\"standard.\"", ")", "log_json_incompatible_types", "(", "obj", ")", "raise_with_traceback", "(", "error", ")" ]
Turn a nested object into a (compressed) JSON string. Parameters ---------- obj : dict Any kind of dictionary structure. pretty : bool, optional Whether to format the resulting JSON in a more legible way ( default False).
[ "Turn", "a", "nested", "object", "into", "a", "(", "compressed", ")", "JSON", "string", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/utils.py#L225-L251
train
Converts a nested object into a JSON string.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(111) + '\062' + chr(0b110001) + chr(0b1110 + 0o45), 0b1000), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(11373 - 11262) + chr(0b10000 + 0o44) + '\063', 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\062' + '\x33' + chr(55), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010 + 0o1), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(51) + '\062' + chr(1352 - 1299), 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\x33' + chr(1265 - 1215) + chr(0b110000), 51311 - 51303), nzTpIcepk0o8('\x30' + chr(0b1100100 + 0o13) + '\x36' + chr(0b110000), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x36' + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x31' + '\x37' + chr(0b10001 + 0o41), 47766 - 47758), nzTpIcepk0o8(chr(0b10011 + 0o35) + chr(0b1101111) + chr(49) + '\065' + chr(0b101100 + 0o11), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\061' + chr(0b110110) + '\x34', 0b1000), nzTpIcepk0o8(chr(2298 - 2250) + '\x6f' + '\x31' + '\060' + chr(48), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101000 + 0o7) + '\x32' + chr(226 - 175) + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(1260 - 1212) + chr(0b1101111) + chr(0b11101 + 0o24) + chr(0b10000 + 0o46), 0b1000), nzTpIcepk0o8('\060' + chr(0b1001010 + 0o45) + chr(53) + chr(530 - 479), 8051 - 8043), nzTpIcepk0o8('\060' + chr(9669 - 9558) + chr(409 - 360) + chr(54 - 4) + chr(54), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(1087 - 1034) + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(0b10100 + 0o34) + '\157' + chr(0b110000), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(51) + chr(48) + '\061', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1 + 0o156) + chr(842 - 789) + chr(0b110111), 17242 - 17234), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(111) + '\x32' + chr(147 - 97) + '\060', 0o10), nzTpIcepk0o8(chr(1492 - 1444) + chr(1520 - 1409) + chr(1215 - 1165) + chr(0b110001) + chr(49), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b110100 + 0o73) + chr(49) + chr(51) + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(2087 - 2039) + chr(9149 - 9038) + chr(0b110110) + chr(0b10011 + 0o44), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(50) + chr(0b110111) + chr(0b110100), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\062' + '\067' + chr(0b110000), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(49) + chr(49) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b10111 + 0o34) + chr(0b100111 + 0o20), 56485 - 56477), nzTpIcepk0o8(chr(1449 - 1401) + '\157' + chr(49) + '\063' + '\x35', 8), nzTpIcepk0o8(chr(0b11001 + 0o27) + chr(2428 - 2317) + '\x36' + chr(2546 - 2495), 1851 - 1843), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x31' + chr(0b11011 + 0o34) + '\063', 17446 - 17438), nzTpIcepk0o8('\060' + '\157' + '\063' + chr(0b110010) + chr(0b100111 + 0o15), 0b1000), nzTpIcepk0o8(chr(0b11 + 0o55) + chr(111) + '\062' + chr(0b110011), 25065 - 25057), nzTpIcepk0o8(chr(0b100010 + 0o16) + '\157' + chr(0b1000 + 0o53), 8), nzTpIcepk0o8(chr(0b10 + 0o56) + '\x6f' + chr(0b110001) + chr(0b11111 + 0o23) + chr(2365 - 2313), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(1166 - 1114) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(1400 - 1347) + chr(0b110110), 8724 - 8716), nzTpIcepk0o8(chr(48) + chr(111) + chr(1718 - 1669) + '\x33' + chr(0b100000 + 0o26), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b1111 + 0o42) + '\060' + chr(48), 8), nzTpIcepk0o8(chr(0b110000) + chr(8988 - 8877) + chr(562 - 512) + chr(1486 - 1436) + '\065', 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(274 - 226) + chr(0b111111 + 0o60) + chr(1066 - 1013) + chr(48), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xa5'), chr(0b111 + 0o135) + chr(101) + chr(0b1011101 + 0o6) + chr(0b1101111) + '\144' + chr(6775 - 6674))(chr(4088 - 3971) + '\x74' + chr(0b1110 + 0o130) + '\x2d' + chr(2234 - 2178)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def KX6AkKujYHMO(kIMfkyypPTcC, bQgFVZh4cKad=nzTpIcepk0o8('\060' + chr(4485 - 4374) + chr(1344 - 1296), 8)): if bQgFVZh4cKad: GVgFAYMz7Sw8 = znjnJWK64FDT(sort_keys=nzTpIcepk0o8('\060' + chr(0b1100000 + 0o17) + '\061', ord("\x08")), indent=nzTpIcepk0o8('\x30' + chr(7096 - 6985) + '\062', 0b1000), allow_nan=nzTpIcepk0o8(chr(0b101101 + 0o3) + chr(7122 - 7011) + chr(1083 - 1035), 8), separators=(roI3spqORKae(ES5oEprVxulp(b'\xa7'), chr(377 - 277) + chr(5715 - 5614) + '\143' + chr(0b10001 + 0o136) + '\144' + chr(0b1100101))('\x75' + '\164' + chr(0b1001101 + 0o31) + chr(0b11110 + 0o17) + '\x38'), roI3spqORKae(ES5oEprVxulp(b'\xb1\x03'), '\x64' + chr(0b1100101) + '\x63' + chr(1436 - 1325) + '\x64' + chr(0b1100101))(chr(117) + '\x74' + '\146' + '\055' + chr(56))), ensure_ascii=nzTpIcepk0o8(chr(0b110000) + chr(8758 - 8647) + '\x30', 8)) else: GVgFAYMz7Sw8 = znjnJWK64FDT(sort_keys=nzTpIcepk0o8(chr(1180 - 1132) + '\157' + chr(0b110000), 8), indent=None, allow_nan=nzTpIcepk0o8('\x30' + '\x6f' + chr(48), 8), separators=(roI3spqORKae(ES5oEprVxulp(b'\xa7'), '\144' + chr(101) + chr(0b1000011 + 0o40) + chr(0b1101100 + 0o3) + chr(100) + chr(818 - 717))(chr(0b11010 + 0o133) + chr(0b10100 + 0o140) + '\146' + chr(45) + chr(0b100 + 0o64)), roI3spqORKae(ES5oEprVxulp(b'\xb1'), chr(0b1100100) + chr(7212 - 7111) + chr(5083 - 4984) + chr(0b11100 + 0o123) + chr(4916 - 4816) + chr(101))('\165' + chr(0b111100 + 0o70) + '\x66' + chr(0b100111 + 0o6) + chr(0b111000))), ensure_ascii=nzTpIcepk0o8('\060' + chr(11885 - 11774) + chr(794 - 746), 8)) try: return roI3spqORKae(LNUKEwZDIbyb, roI3spqORKae(ES5oEprVxulp(b'\xd1I\xf8o\xb8\xbd\x08C\x1f\x03\x1f\x03'), chr(5488 - 5388) + '\145' + chr(0b1100011) + chr(0b1101111) + '\144' + chr(4554 - 4453))(chr(0b1110101) + chr(0b1110100) + chr(0b1100000 + 0o6) + chr(0b10010 + 0o33) + chr(0b111000)))(kIMfkyypPTcC, **GVgFAYMz7Sw8) except (jZIjKu8IFANs, WbNHlDKpyPtQ) as qi1wipPVvEKd: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xe8Q\xf6w\xbc\xb3QZ'), chr(0b1100100) + '\145' + chr(3420 - 3321) + '\x6f' + '\x64' + chr(0b100111 + 0o76))(chr(0b1110101) + chr(0b100011 + 0o121) + chr(102) + chr(0b101101 + 0o0) + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'\xdfK\xfa#\xb8\xb5]Y\x0e\x08T2\xfe}^:X \xb2[\xe2\xfc>C\xc9\xca*?4@[\xbd}`;I^?4\xfc\xe9O\xfa#\xa2\xb9D^Z\x19\x1c%\xbbDx\x19b \xb2[\xf1\xe79V\xce\xdca'), chr(100) + chr(0b1100001 + 0o4) + chr(99) + chr(0b1101111) + chr(0b1100100) + chr(101))(chr(117) + '\164' + chr(102) + chr(0b101101) + chr(0b111000))) aIJeb4Um0VzR(kIMfkyypPTcC) OIDii7_nVdKe(qi1wipPVvEKd)
opencobra/memote
memote/utils.py
flatten
def flatten(list_of_lists): """Flatten a list of lists but maintain strings and ints as entries.""" flat_list = [] for sublist in list_of_lists: if isinstance(sublist, string_types) or isinstance(sublist, int): flat_list.append(sublist) elif sublist is None: continue elif not isinstance(sublist, string_types) and len(sublist) == 1: flat_list.append(sublist[0]) else: flat_list.append(tuple(sublist)) return flat_list
python
def flatten(list_of_lists): """Flatten a list of lists but maintain strings and ints as entries.""" flat_list = [] for sublist in list_of_lists: if isinstance(sublist, string_types) or isinstance(sublist, int): flat_list.append(sublist) elif sublist is None: continue elif not isinstance(sublist, string_types) and len(sublist) == 1: flat_list.append(sublist[0]) else: flat_list.append(tuple(sublist)) return flat_list
[ "def", "flatten", "(", "list_of_lists", ")", ":", "flat_list", "=", "[", "]", "for", "sublist", "in", "list_of_lists", ":", "if", "isinstance", "(", "sublist", ",", "string_types", ")", "or", "isinstance", "(", "sublist", ",", "int", ")", ":", "flat_list", ".", "append", "(", "sublist", ")", "elif", "sublist", "is", "None", ":", "continue", "elif", "not", "isinstance", "(", "sublist", ",", "string_types", ")", "and", "len", "(", "sublist", ")", "==", "1", ":", "flat_list", ".", "append", "(", "sublist", "[", "0", "]", ")", "else", ":", "flat_list", ".", "append", "(", "tuple", "(", "sublist", ")", ")", "return", "flat_list" ]
Flatten a list of lists but maintain strings and ints as entries.
[ "Flatten", "a", "list", "of", "lists", "but", "maintain", "strings", "and", "ints", "as", "entries", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/utils.py#L254-L266
train
Flatten a list of lists but maintain strings and ints as entries.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(1346 - 1298) + chr(0b11001 + 0o126) + chr(1582 - 1531) + chr(49) + '\067', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b0 + 0o157) + chr(1878 - 1829) + chr(1701 - 1648) + chr(1417 - 1369), 10660 - 10652), nzTpIcepk0o8(chr(0b1011 + 0o45) + chr(0b1010010 + 0o35) + chr(0b101000 + 0o12) + chr(505 - 454) + chr(0b10001 + 0o44), 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\x36' + chr(0b100100 + 0o22), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b1111 + 0o44) + '\062' + chr(0b110111), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + '\062' + '\062' + '\064', 56840 - 56832), nzTpIcepk0o8(chr(1586 - 1538) + '\x6f' + chr(0b110011) + '\x37' + '\x30', ord("\x08")), nzTpIcepk0o8(chr(0b100010 + 0o16) + chr(111) + chr(0b110001 + 0o2) + '\x30' + chr(55), 64868 - 64860), nzTpIcepk0o8('\060' + chr(111) + chr(0b110011) + chr(53) + chr(243 - 195), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b100010 + 0o115) + chr(0b110010) + chr(2000 - 1948) + chr(51), 54530 - 54522), nzTpIcepk0o8('\x30' + chr(111) + chr(49) + chr(0b1 + 0o57) + '\067', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(9092 - 8981) + '\x32' + chr(51) + chr(0b110000), ord("\x08")), nzTpIcepk0o8(chr(0b101000 + 0o10) + chr(111) + chr(49) + '\x35' + chr(837 - 789), 8), nzTpIcepk0o8('\x30' + '\157' + '\061' + chr(54) + chr(0b110000), 0o10), nzTpIcepk0o8(chr(2160 - 2112) + chr(111) + chr(2260 - 2209) + '\060' + '\064', 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(50) + chr(1810 - 1755) + chr(0b110000), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x32' + chr(0b110011) + chr(1713 - 1662), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(9432 - 9321) + chr(0b110010) + '\067' + '\x34', 9229 - 9221), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(0b111101 + 0o62) + '\062' + chr(53) + chr(48), ord("\x08")), nzTpIcepk0o8(chr(0b101010 + 0o6) + '\x6f' + chr(1842 - 1792) + chr(55) + chr(629 - 580), ord("\x08")), nzTpIcepk0o8('\060' + chr(8220 - 8109) + chr(0b11010 + 0o31) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(1679 - 1631) + chr(11081 - 10970) + '\061' + '\x30' + chr(50), 0o10), nzTpIcepk0o8(chr(48) + chr(0b110 + 0o151) + '\x32' + chr(0b101011 + 0o13) + chr(0b100111 + 0o11), 1711 - 1703), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(0b1101111) + '\063' + chr(0b1 + 0o63) + chr(54), 17246 - 17238), nzTpIcepk0o8(chr(48) + chr(0b110001 + 0o76) + chr(0b110010) + chr(54) + '\061', 0o10), nzTpIcepk0o8(chr(219 - 171) + chr(0b1101111) + chr(780 - 731) + chr(0b110 + 0o53) + chr(0b110011), 24937 - 24929), nzTpIcepk0o8('\x30' + chr(0b10001 + 0o136) + '\x31' + chr(0b11 + 0o55) + '\x30', 28278 - 28270), nzTpIcepk0o8(chr(175 - 127) + '\x6f' + '\x31' + chr(0b110101) + '\x37', 53235 - 53227), nzTpIcepk0o8(chr(2243 - 2195) + chr(0b1101111) + chr(371 - 321) + chr(0b101111 + 0o7) + chr(0b11101 + 0o26), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110001) + chr(2574 - 2522) + '\x36', 0b1000), nzTpIcepk0o8(chr(0b110000 + 0o0) + chr(0b111000 + 0o67) + '\x32' + chr(0b110101), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(53) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\061' + chr(50) + chr(0b1000 + 0o57), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b11000 + 0o32) + chr(0b1001 + 0o51) + chr(294 - 246), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(3734 - 3623) + '\x32' + chr(48) + chr(50), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110001) + chr(48) + '\066', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\062' + '\067' + chr(0b100001 + 0o23), 8), nzTpIcepk0o8(chr(0b110000) + chr(0b10 + 0o155) + '\x32' + chr(0b110011) + '\x35', 8), nzTpIcepk0o8('\x30' + chr(111) + '\061' + chr(0b100011 + 0o15) + chr(0b110110), 8), nzTpIcepk0o8(chr(0b110000) + chr(12113 - 12002) + '\062' + chr(0b110110) + chr(0b100001 + 0o22), 8)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b101110 + 0o2) + '\x6f' + chr(53) + chr(1331 - 1283), 50653 - 50645)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xe1'), '\x64' + chr(5936 - 5835) + '\x63' + chr(111) + chr(0b1001100 + 0o30) + chr(0b1100101))(chr(11631 - 11514) + chr(0b1110100) + '\146' + '\x2d' + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def wozqDwllRa_T(iB8oN4UDD5zL): zLmV_RGhhPZo = [] for PkJVWpA7b9v3 in iB8oN4UDD5zL: if suIjIS24Zkqw(PkJVWpA7b9v3, Q9V5WOaImAwl) or suIjIS24Zkqw(PkJVWpA7b9v3, nzTpIcepk0o8): roI3spqORKae(zLmV_RGhhPZo, roI3spqORKae(ES5oEprVxulp(b'\x87<\xce\x02\xaf\xf3\xbf\xa8\x82\xcc\x12\xad'), '\144' + chr(6695 - 6594) + chr(0b1100011) + chr(1003 - 892) + chr(0b1100100) + chr(101))('\x75' + chr(0b1100011 + 0o21) + chr(0b1100110) + '\x2d' + chr(0b110011 + 0o5)))(PkJVWpA7b9v3) elif PkJVWpA7b9v3 is None: continue elif not suIjIS24Zkqw(PkJVWpA7b9v3, Q9V5WOaImAwl) and ftfygxgFas5X(PkJVWpA7b9v3) == nzTpIcepk0o8(chr(1128 - 1080) + chr(2132 - 2021) + '\061', 0b1000): roI3spqORKae(zLmV_RGhhPZo, roI3spqORKae(ES5oEprVxulp(b'\x87<\xce\x02\xaf\xf3\xbf\xa8\x82\xcc\x12\xad'), '\x64' + chr(101) + chr(99) + chr(0b1101111) + '\144' + chr(9863 - 9762))(chr(117) + '\x74' + chr(0b1100110) + chr(0b100111 + 0o6) + chr(0b111000)))(PkJVWpA7b9v3[nzTpIcepk0o8('\060' + chr(0b11001 + 0o126) + chr(0b110000), 37825 - 37817)]) else: roI3spqORKae(zLmV_RGhhPZo, roI3spqORKae(ES5oEprVxulp(b'\x87<\xce\x02\xaf\xf3\xbf\xa8\x82\xcc\x12\xad'), '\x64' + '\x65' + chr(99) + '\x6f' + chr(0b1100100) + chr(0b1100010 + 0o3))(chr(117) + chr(0b1110100) + chr(102) + '\x2d' + chr(0b110111 + 0o1)))(nfNqtJL5aRaY(PkJVWpA7b9v3)) return zLmV_RGhhPZo
opencobra/memote
memote/utils.py
stdout_notifications
def stdout_notifications(notifications): """ Print each entry of errors and warnings to stdout. Parameters ---------- notifications: dict A simple dictionary structure containing a list of errors and warnings. """ for error in notifications["errors"]: LOGGER.error(error) for warn in notifications["warnings"]: LOGGER.warning(warn)
python
def stdout_notifications(notifications): """ Print each entry of errors and warnings to stdout. Parameters ---------- notifications: dict A simple dictionary structure containing a list of errors and warnings. """ for error in notifications["errors"]: LOGGER.error(error) for warn in notifications["warnings"]: LOGGER.warning(warn)
[ "def", "stdout_notifications", "(", "notifications", ")", ":", "for", "error", "in", "notifications", "[", "\"errors\"", "]", ":", "LOGGER", ".", "error", "(", "error", ")", "for", "warn", "in", "notifications", "[", "\"warnings\"", "]", ":", "LOGGER", ".", "warning", "(", "warn", ")" ]
Print each entry of errors and warnings to stdout. Parameters ---------- notifications: dict A simple dictionary structure containing a list of errors and warnings.
[ "Print", "each", "entry", "of", "errors", "and", "warnings", "to", "stdout", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/utils.py#L289-L302
train
Prints each entry of errors and warnings to stdout.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b101101 + 0o3) + chr(111) + chr(0b110100) + '\x32', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\061' + '\060', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x33' + chr(55), 0o10), nzTpIcepk0o8('\060' + chr(2819 - 2708) + '\x37' + chr(51), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b100100 + 0o16) + chr(0b110101 + 0o1) + chr(0b110010), 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(0b100000 + 0o26) + '\067', 58243 - 58235), nzTpIcepk0o8(chr(48) + chr(9205 - 9094) + '\x31' + chr(0b110000) + '\061', 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\x33' + chr(104 - 50), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b10110 + 0o35) + chr(0b110001) + '\060', ord("\x08")), nzTpIcepk0o8(chr(253 - 205) + chr(111) + '\x33' + chr(2800 - 2745) + chr(1522 - 1468), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(98 - 48) + chr(685 - 636) + chr(520 - 465), 0b1000), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(0b1000110 + 0o51) + chr(1269 - 1220) + '\x30' + '\x34', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b111000 + 0o67) + '\062' + chr(0b1010 + 0o46) + chr(51), 0o10), nzTpIcepk0o8(chr(990 - 942) + '\x6f' + chr(1911 - 1857) + '\063', 0o10), nzTpIcepk0o8(chr(1111 - 1063) + chr(0b1101111) + '\063' + chr(0b110001) + chr(0b110011), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1485 - 1436) + '\060' + '\x33', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b111 + 0o54) + '\x30' + '\x33', ord("\x08")), nzTpIcepk0o8(chr(373 - 325) + chr(9860 - 9749) + '\x37', 0o10), nzTpIcepk0o8(chr(1709 - 1661) + chr(111) + chr(0b110001) + '\x32' + chr(2481 - 2428), 0b1000), nzTpIcepk0o8(chr(0b10000 + 0o40) + chr(0b100000 + 0o117) + chr(51) + chr(0b1100 + 0o44) + chr(52), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(0b110001) + '\x33' + '\063', 0o10), nzTpIcepk0o8('\060' + chr(8784 - 8673) + '\x31' + '\x32' + chr(0b110011), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b111 + 0o53) + '\060' + chr(0b101100 + 0o4), 43742 - 43734), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b11001 + 0o32) + '\060' + chr(2047 - 1994), 50494 - 50486), nzTpIcepk0o8(chr(1088 - 1040) + chr(5159 - 5048) + chr(0b11111 + 0o24) + '\x33' + '\066', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\062' + chr(0b110000) + chr(0b110010 + 0o5), 0o10), nzTpIcepk0o8(chr(0b100000 + 0o20) + '\x6f' + chr(2025 - 1974) + '\062' + chr(2449 - 2399), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b110101 + 0o72) + chr(958 - 909) + '\067' + chr(0b110010), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1000010 + 0o55) + '\063' + chr(0b110100) + chr(0b100101 + 0o17), 0b1000), nzTpIcepk0o8(chr(0b11111 + 0o21) + '\157' + chr(1261 - 1210) + chr(0b11000 + 0o31) + chr(50), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(51) + chr(1671 - 1623), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\066', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(109 - 60) + '\x31' + chr(0b10100 + 0o35), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b101010 + 0o7) + chr(0b110011) + '\x37', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(1736 - 1683) + chr(0b110011), 0b1000), nzTpIcepk0o8('\060' + chr(0b11110 + 0o121) + chr(0b110001 + 0o1) + chr(1658 - 1605) + chr(0b110010 + 0o0), 0o10), nzTpIcepk0o8(chr(2015 - 1967) + chr(0b11101 + 0o122) + chr(0b10011 + 0o37) + chr(54) + chr(48), 23857 - 23849), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(674 - 623) + '\x34' + '\x30', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110011) + chr(53) + chr(0b110000), 45594 - 45586), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110011) + chr(477 - 426), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(111) + chr(53) + '\x30', ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x0c'), chr(100) + chr(125 - 24) + chr(4042 - 3943) + chr(0b111010 + 0o65) + '\x64' + '\145')(chr(9776 - 9659) + chr(116) + chr(0b1011100 + 0o12) + chr(45) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def aNllyZ4c8iCJ(cs_JYvA6rYIB): for qi1wipPVvEKd in cs_JYvA6rYIB[roI3spqORKae(ES5oEprVxulp(b'GzmT\xc0D'), chr(100) + chr(0b1000110 + 0o37) + chr(0b1100011) + '\157' + '\144' + '\145')(chr(0b1110101) + chr(0b1111 + 0o145) + '\146' + chr(320 - 275) + chr(56))]: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'Sa.L\xdbG\x11H\xbe\xbb\xc4 '), chr(0b1011010 + 0o12) + chr(101) + chr(99) + '\157' + chr(5074 - 4974) + '\145')(chr(7499 - 7382) + chr(116) + chr(102) + '\055' + '\070'))(qi1wipPVvEKd) for sJQV_HqS9fgz in cs_JYvA6rYIB[roI3spqORKae(ES5oEprVxulp(b'UimU\xdbY&m'), '\x64' + '\145' + chr(0b111001 + 0o52) + chr(0b1101111) + '\144' + '\x65')(chr(0b1110101) + chr(116) + '\146' + '\x2d' + '\070')]: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'UimU\xdbY&'), '\144' + '\x65' + chr(7580 - 7481) + '\x6f' + chr(100) + '\x65')(chr(117) + '\164' + '\146' + chr(0b101101) + chr(0b111000)))(sJQV_HqS9fgz)
opencobra/memote
memote/experimental/experimental_base.py
ExperimentalBase.load
def load(self, dtype_conversion=None): """ Load the data table and corresponding validation schema. Parameters ---------- dtype_conversion : dict Column names as keys and corresponding type for loading the data. Please take a look at the `pandas documentation <https://pandas.pydata.org/pandas-docs/stable/io.html#specifying-column-data-types>`__ for detailed explanations. """ self.data = read_tabular(self.filename, dtype_conversion) with open_text(memote.experimental.schemata, self.SCHEMA, encoding="utf-8") as file_handle: self.schema = json.load(file_handle)
python
def load(self, dtype_conversion=None): """ Load the data table and corresponding validation schema. Parameters ---------- dtype_conversion : dict Column names as keys and corresponding type for loading the data. Please take a look at the `pandas documentation <https://pandas.pydata.org/pandas-docs/stable/io.html#specifying-column-data-types>`__ for detailed explanations. """ self.data = read_tabular(self.filename, dtype_conversion) with open_text(memote.experimental.schemata, self.SCHEMA, encoding="utf-8") as file_handle: self.schema = json.load(file_handle)
[ "def", "load", "(", "self", ",", "dtype_conversion", "=", "None", ")", ":", "self", ".", "data", "=", "read_tabular", "(", "self", ".", "filename", ",", "dtype_conversion", ")", "with", "open_text", "(", "memote", ".", "experimental", ".", "schemata", ",", "self", ".", "SCHEMA", ",", "encoding", "=", "\"utf-8\"", ")", "as", "file_handle", ":", "self", ".", "schema", "=", "json", ".", "load", "(", "file_handle", ")" ]
Load the data table and corresponding validation schema. Parameters ---------- dtype_conversion : dict Column names as keys and corresponding type for loading the data. Please take a look at the `pandas documentation <https://pandas.pydata.org/pandas-docs/stable/io.html#specifying-column-data-types>`__ for detailed explanations.
[ "Load", "the", "data", "table", "and", "corresponding", "validation", "schema", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/experimental_base.py#L72-L88
train
Load the data table and validation schema.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(111) + '\x34' + chr(0b110110), 0o10), nzTpIcepk0o8(chr(1242 - 1194) + '\x6f' + '\063' + chr(0b11010 + 0o33) + '\067', 9783 - 9775), nzTpIcepk0o8('\x30' + chr(0b1101001 + 0o6) + chr(0b1110 + 0o43) + chr(0b110011 + 0o4) + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110011) + chr(0b1100 + 0o52) + chr(0b1111 + 0o44), 5158 - 5150), nzTpIcepk0o8(chr(48) + '\x6f' + '\062' + '\063' + chr(671 - 619), 0b1000), nzTpIcepk0o8(chr(237 - 189) + '\x6f' + chr(1029 - 978) + chr(0b100010 + 0o21) + '\x33', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(11666 - 11555) + '\063' + '\067' + chr(51), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b100100 + 0o17) + chr(55) + chr(0b1001 + 0o50), 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(0b1110 + 0o44) + '\x35' + '\065', 13799 - 13791), nzTpIcepk0o8(chr(0b110000) + chr(0b1100 + 0o143) + chr(0b110011) + '\066' + chr(103 - 54), 49309 - 49301), nzTpIcepk0o8('\060' + chr(111) + '\x33' + chr(0b110011) + chr(0b110010), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110001 + 0o1) + chr(185 - 134) + chr(1472 - 1422), ord("\x08")), nzTpIcepk0o8('\060' + chr(2337 - 2226) + chr(1976 - 1925) + chr(0b110101) + chr(0b110101), 14655 - 14647), nzTpIcepk0o8('\x30' + chr(111) + '\062' + chr(0b110111) + '\x30', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\062' + '\061' + '\061', 0b1000), nzTpIcepk0o8(chr(1716 - 1668) + '\157' + chr(0b100 + 0o55) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(0b10 + 0o56) + chr(111) + chr(1840 - 1789) + chr(0b110000 + 0o3) + '\x35', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + chr(48), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b110110) + chr(48), 31029 - 31021), nzTpIcepk0o8(chr(1071 - 1023) + chr(0b110011 + 0o74) + chr(50) + chr(0b1111 + 0o50) + chr(50), 15071 - 15063), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(2003 - 1954) + chr(50) + chr(49), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110001) + chr(0b110111) + '\x30', 28714 - 28706), nzTpIcepk0o8(chr(173 - 125) + '\157' + chr(49) + '\063' + '\066', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + '\x33' + '\062' + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(1514 - 1466) + chr(3826 - 3715) + chr(1906 - 1856) + chr(1765 - 1710) + '\065', 0b1000), nzTpIcepk0o8(chr(655 - 607) + '\x6f' + chr(0b110001) + chr(0b1000 + 0o56) + chr(1065 - 1014), 0o10), nzTpIcepk0o8(chr(48) + chr(5694 - 5583) + chr(0b110001) + chr(53) + chr(1700 - 1651), 43164 - 43156), nzTpIcepk0o8('\x30' + chr(111) + chr(50) + chr(0b110100) + chr(49), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110011) + '\065' + chr(55), 8), nzTpIcepk0o8('\060' + chr(111) + chr(1820 - 1770) + chr(0b11010 + 0o30) + chr(55), 12087 - 12079), nzTpIcepk0o8(chr(48) + '\157' + chr(49) + chr(52) + chr(2439 - 2385), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110011) + chr(1500 - 1447) + chr(985 - 930), 8), nzTpIcepk0o8('\060' + chr(12008 - 11897) + chr(54), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\063' + '\065' + chr(1863 - 1815), 43413 - 43405), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x32' + chr(0b110101) + '\067', ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\x33' + chr(54) + chr(0b110101), 52809 - 52801), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b10 + 0o57) + chr(0b110000) + chr(54), 23849 - 23841), nzTpIcepk0o8('\060' + chr(111) + chr(50) + '\063' + chr(0b110011), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(1026 - 975) + chr(50) + chr(49), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110100) + chr(0b110100), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(53) + chr(803 - 755), ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x08'), '\144' + '\x65' + chr(0b1010111 + 0o14) + chr(12143 - 12032) + chr(100) + '\145')('\x75' + chr(0b1110100) + chr(0b1100110) + '\x2d' + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def ZERsdc7c1d8E(hXMPsSrOQzbh, IoJD1UcfkRii=None): hXMPsSrOQzbh.FfKOThdpoDTb = peoeL8mAx6OC(hXMPsSrOQzbh.FxZHtXEolYsL, IoJD1UcfkRii) with QJqzEGXriwBk(roI3spqORKae(gz_C3Dm7JqNW.experimental, roI3spqORKae(ES5oEprVxulp(b'U\x8c\x11\x96\xf1\xba\x8f\x98'), chr(0b1100100) + chr(101) + '\143' + chr(111) + chr(9635 - 9535) + chr(1932 - 1831))(chr(9718 - 9601) + chr(0b1000011 + 0o61) + chr(0b1100110) + chr(1655 - 1610) + chr(0b100101 + 0o23))), roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'u\xac1\xb6\xd1\x9a'), '\x64' + '\145' + '\143' + chr(0b110 + 0o151) + chr(0b111 + 0o135) + '\x65')(chr(0b1110101) + chr(0b1110100) + chr(0b1001 + 0o135) + '\x2d' + chr(0b111000))), encoding=roI3spqORKae(ES5oEprVxulp(b'S\x9b\x1f\xde\xa4'), '\x64' + chr(0b110001 + 0o64) + chr(0b1100011) + chr(0b1101111) + chr(100) + chr(3873 - 3772))(chr(0b111111 + 0o66) + '\164' + '\146' + chr(0b101101) + '\x38')) as rC115QJVCRma: hXMPsSrOQzbh.HkLOSIHgtf7k = LNUKEwZDIbyb.ZERsdc7c1d8E(rC115QJVCRma)
opencobra/memote
memote/experimental/experimental_base.py
ExperimentalBase.validate
def validate(self, model, checks=[]): """Use a defined schema to validate the given table.""" records = self.data.to_dict("records") self.evaluate_report( validate(records, headers=list(records[0]), preset='table', schema=self.schema, order_fields=True, custom_checks=checks))
python
def validate(self, model, checks=[]): """Use a defined schema to validate the given table.""" records = self.data.to_dict("records") self.evaluate_report( validate(records, headers=list(records[0]), preset='table', schema=self.schema, order_fields=True, custom_checks=checks))
[ "def", "validate", "(", "self", ",", "model", ",", "checks", "=", "[", "]", ")", ":", "records", "=", "self", ".", "data", ".", "to_dict", "(", "\"records\"", ")", "self", ".", "evaluate_report", "(", "validate", "(", "records", ",", "headers", "=", "list", "(", "records", "[", "0", "]", ")", ",", "preset", "=", "'table'", ",", "schema", "=", "self", ".", "schema", ",", "order_fields", "=", "True", ",", "custom_checks", "=", "checks", ")", ")" ]
Use a defined schema to validate the given table.
[ "Use", "a", "defined", "schema", "to", "validate", "the", "given", "table", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/experimental_base.py#L90-L96
train
Use a defined schema to validate the given table.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x31' + chr(1110 - 1055) + chr(48), 20735 - 20727), nzTpIcepk0o8(chr(2214 - 2166) + chr(0b1101111) + chr(1863 - 1813) + chr(0b100000 + 0o27) + '\067', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(1731 - 1680) + chr(985 - 936) + chr(2557 - 2505), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(49) + chr(48) + chr(421 - 368), 0o10), nzTpIcepk0o8(chr(0b100011 + 0o15) + '\x6f' + '\061' + chr(0b11010 + 0o35) + '\067', 37474 - 37466), nzTpIcepk0o8(chr(48) + chr(0b1010 + 0o145) + '\x31' + chr(0b10100 + 0o40) + chr(53), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b1010 + 0o53) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(0b100001 + 0o17) + '\157' + chr(590 - 539) + '\x32' + '\x36', 27402 - 27394), nzTpIcepk0o8(chr(1098 - 1050) + '\x6f' + chr(0b11101 + 0o24) + chr(0b110001) + chr(0b100111 + 0o17), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + '\061' + '\062' + '\063', 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110010) + chr(0b110000) + chr(51), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(2005 - 1954) + chr(2642 - 2590) + '\x33', 0b1000), nzTpIcepk0o8(chr(0b111 + 0o51) + chr(0b1101111) + chr(50) + chr(0b1001 + 0o55) + chr(0b11000 + 0o36), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(8983 - 8872) + chr(49) + '\062' + chr(53), ord("\x08")), nzTpIcepk0o8(chr(0b100000 + 0o20) + chr(0b1101111) + chr(0b100011 + 0o20) + chr(0b100010 + 0o16), 2922 - 2914), nzTpIcepk0o8('\x30' + chr(0b1001001 + 0o46) + chr(0b1010 + 0o51) + '\x37' + '\066', 0b1000), nzTpIcepk0o8(chr(48) + chr(4278 - 4167) + '\061' + chr(0b10 + 0o63), 43560 - 43552), nzTpIcepk0o8('\060' + chr(111) + chr(0b110011) + '\064' + '\x30', ord("\x08")), nzTpIcepk0o8(chr(0b11011 + 0o25) + '\157' + chr(0b101110 + 0o5) + '\x36' + chr(0b110100), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + '\063' + '\065' + chr(50), 0o10), nzTpIcepk0o8(chr(1167 - 1119) + chr(111) + chr(51) + chr(0b101010 + 0o6) + chr(0b10 + 0o61), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x32' + chr(499 - 451), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110111) + chr(52), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(7974 - 7863) + '\063' + chr(0b110011) + chr(51), 26897 - 26889), nzTpIcepk0o8(chr(0b110000) + chr(9351 - 9240) + '\x32' + '\x34' + chr(1995 - 1947), 0b1000), nzTpIcepk0o8(chr(380 - 332) + '\157' + chr(1368 - 1318) + '\066' + chr(1906 - 1853), 37817 - 37809), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(0b110 + 0o151) + chr(51) + chr(0b100010 + 0o20) + chr(0b1101 + 0o45), ord("\x08")), nzTpIcepk0o8(chr(0b1001 + 0o47) + '\157' + '\062' + chr(0b110010) + chr(0b110000), 0o10), nzTpIcepk0o8('\x30' + chr(0b1000110 + 0o51) + chr(0b101100 + 0o6) + '\062' + chr(1467 - 1417), ord("\x08")), nzTpIcepk0o8(chr(0b10011 + 0o35) + chr(0b1101111) + '\x33' + chr(236 - 188) + chr(50), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(51) + chr(0b110101) + chr(0b110000), 0o10), nzTpIcepk0o8(chr(2083 - 2035) + chr(0b1101111) + '\x36' + '\062', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1001010 + 0o45) + '\x31' + chr(0b110011) + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(533 - 485) + chr(7940 - 7829) + chr(1497 - 1449), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(53) + chr(872 - 824), 58239 - 58231), nzTpIcepk0o8(chr(0b110000) + chr(0b1001111 + 0o40) + chr(1163 - 1113) + chr(0b110011) + chr(0b10011 + 0o36), 31963 - 31955), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\062' + '\061' + chr(0b11001 + 0o36), 0b1000), nzTpIcepk0o8(chr(0b1010 + 0o46) + '\157' + chr(0b110001) + chr(0b110000) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\x32' + '\063' + chr(53), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\x37' + chr(53), 6841 - 6833)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b11001 + 0o27) + '\157' + chr(0b110101) + '\060', 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'V'), '\144' + '\x65' + '\143' + chr(0b1101111) + chr(100) + chr(0b1100101))(chr(0b110000 + 0o105) + chr(0b1 + 0o163) + chr(0b1100110) + chr(0b10010 + 0o33) + chr(2807 - 2751)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def G40dcSccAFaB(hXMPsSrOQzbh, KW0sEfjlgNpM, NVULxIHSU5SZ=[]): W5rVqCGgLpfs = hXMPsSrOQzbh.data.to_dict(roI3spqORKae(ES5oEprVxulp(b'\n\xda\xaf*\r\x01X'), chr(0b1100100) + chr(101) + '\143' + chr(0b111100 + 0o63) + chr(5559 - 5459) + chr(8802 - 8701))(chr(0b1110101) + '\164' + '\146' + '\x2d' + chr(0b111000))) roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b"\x1d\xc9\xad)\n\x04_\xb3\x11!\xe6\x93\xd9'l"), chr(0b1100100 + 0o0) + '\x65' + chr(0b1111 + 0o124) + chr(1458 - 1347) + '\144' + chr(2607 - 2506))(chr(0b1010 + 0o153) + chr(4642 - 4526) + chr(7974 - 7872) + chr(0b101101) + chr(56)))(G40dcSccAFaB(W5rVqCGgLpfs, headers=H4NoA26ON7iG(W5rVqCGgLpfs[nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(0b110000 + 0o77) + chr(762 - 714), 8)]), preset=roI3spqORKae(ES5oEprVxulp(b'\x0c\xde\xae)\x1a'), chr(100) + chr(101) + chr(99) + '\x6f' + '\144' + '\x65')('\165' + chr(0b1110100) + chr(102) + chr(45) + '\x38'), schema=roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'0\xd4\x80\n,,c\xb1:5\xb4\x88'), chr(0b1100100) + chr(0b1100101) + chr(99) + chr(111) + chr(0b1100100) + chr(0b1100101))(chr(0b1011000 + 0o35) + '\164' + chr(0b1100110) + '\055' + chr(0b11111 + 0o31))), order_fields=nzTpIcepk0o8(chr(706 - 658) + chr(0b1101111) + chr(0b110001 + 0o0), 0b1000), custom_checks=NVULxIHSU5SZ))
opencobra/memote
memote/experimental/experimental_base.py
ExperimentalBase.evaluate_report
def evaluate_report(report): """Iterate over validation errors.""" if report["valid"]: return for warn in report["warnings"]: LOGGER.warning(warn) # We only ever test one table at a time. for err in report["tables"][0]["errors"]: LOGGER.error(err["message"]) raise ValueError("Invalid data file. Please see errors above.")
python
def evaluate_report(report): """Iterate over validation errors.""" if report["valid"]: return for warn in report["warnings"]: LOGGER.warning(warn) # We only ever test one table at a time. for err in report["tables"][0]["errors"]: LOGGER.error(err["message"]) raise ValueError("Invalid data file. Please see errors above.")
[ "def", "evaluate_report", "(", "report", ")", ":", "if", "report", "[", "\"valid\"", "]", ":", "return", "for", "warn", "in", "report", "[", "\"warnings\"", "]", ":", "LOGGER", ".", "warning", "(", "warn", ")", "# We only ever test one table at a time.", "for", "err", "in", "report", "[", "\"tables\"", "]", "[", "0", "]", "[", "\"errors\"", "]", ":", "LOGGER", ".", "error", "(", "err", "[", "\"message\"", "]", ")", "raise", "ValueError", "(", "\"Invalid data file. Please see errors above.\"", ")" ]
Iterate over validation errors.
[ "Iterate", "over", "validation", "errors", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/experimental_base.py#L99-L108
train
Iterate over validation errors and return the valid object.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b10001 + 0o37) + chr(7880 - 7769) + chr(795 - 745) + chr(0b110101), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\063' + chr(0b101001 + 0o14) + chr(0b110100), 48043 - 48035), nzTpIcepk0o8('\060' + chr(0b111010 + 0o65) + chr(0b110010) + chr(54) + chr(0b11111 + 0o21), 8614 - 8606), nzTpIcepk0o8('\x30' + '\157' + '\067' + '\x36', 0b1000), nzTpIcepk0o8(chr(470 - 422) + chr(0b1101111) + chr(0b110010) + chr(55) + chr(54), 11050 - 11042), nzTpIcepk0o8(chr(48) + '\x6f' + '\x31' + chr(52) + '\066', ord("\x08")), nzTpIcepk0o8(chr(0b101000 + 0o10) + chr(2392 - 2281) + '\061' + '\061' + chr(571 - 521), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\061' + '\061' + '\061', 0o10), nzTpIcepk0o8(chr(1759 - 1711) + chr(111) + chr(51) + chr(52) + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(1624 - 1576) + '\157' + chr(0b1110 + 0o45) + chr(1886 - 1836) + '\x30', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1001101 + 0o42) + chr(419 - 366) + chr(0b0 + 0o67), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(49) + chr(0b110011) + chr(0b11110 + 0o23), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101110 + 0o1) + chr(53) + chr(0b10001 + 0o46), 8), nzTpIcepk0o8('\060' + chr(0b111001 + 0o66) + chr(0b110001) + chr(1421 - 1367) + chr(313 - 264), 16003 - 15995), nzTpIcepk0o8(chr(48) + chr(12119 - 12008) + chr(0b1010 + 0o50) + chr(51) + '\x37', 35653 - 35645), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b100100 + 0o22) + chr(1363 - 1310), 18219 - 18211), nzTpIcepk0o8(chr(0b10101 + 0o33) + '\157' + chr(49) + chr(0b100000 + 0o22) + chr(1227 - 1173), 53656 - 53648), nzTpIcepk0o8('\060' + chr(0b1000110 + 0o51) + chr(0b110011) + chr(0b110011) + chr(1213 - 1165), 20187 - 20179), nzTpIcepk0o8('\060' + '\x6f' + chr(0b11011 + 0o30) + '\x32' + '\x33', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(50) + chr(51), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(51) + chr(0b100100 + 0o16) + chr(0b10001 + 0o45), 36553 - 36545), nzTpIcepk0o8(chr(0b110000) + chr(0b1010100 + 0o33) + chr(0b1100 + 0o45) + '\067' + chr(1530 - 1477), 41760 - 41752), nzTpIcepk0o8(chr(0b110000 + 0o0) + chr(247 - 136) + '\x31' + '\x35', 0o10), nzTpIcepk0o8(chr(0b100100 + 0o14) + chr(5645 - 5534) + chr(49) + '\x35' + '\x31', 55753 - 55745), nzTpIcepk0o8('\060' + chr(0b1101101 + 0o2) + chr(177 - 128) + chr(345 - 291) + chr(0b10111 + 0o34), 6267 - 6259), nzTpIcepk0o8(chr(48) + '\157' + chr(49) + '\064' + chr(55), 23853 - 23845), nzTpIcepk0o8(chr(2269 - 2221) + '\x6f' + chr(0b11111 + 0o22) + chr(1640 - 1592) + chr(406 - 356), 0b1000), nzTpIcepk0o8(chr(229 - 181) + chr(8060 - 7949) + chr(50) + chr(0b10110 + 0o33) + chr(0b100010 + 0o25), ord("\x08")), nzTpIcepk0o8('\060' + chr(6349 - 6238) + chr(1634 - 1584) + '\062' + chr(1527 - 1474), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(50) + chr(0b110110) + '\x30', 8), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b100100 + 0o16) + chr(0b110111) + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(1616 - 1567) + chr(959 - 911) + chr(54), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110 + 0o55) + '\x31' + chr(54), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(2357 - 2307) + chr(53) + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(0b1010 + 0o46) + chr(0b1101111) + '\063' + chr(713 - 665), ord("\x08")), nzTpIcepk0o8(chr(0b11100 + 0o24) + chr(0b1101111) + chr(1933 - 1884) + chr(1127 - 1076) + chr(683 - 633), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(907 - 858) + chr(337 - 287) + '\x34', 10169 - 10161), nzTpIcepk0o8('\x30' + chr(0b100011 + 0o114) + '\x32' + chr(0b1000 + 0o55) + chr(0b110101), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b10000 + 0o43) + chr(0b110010 + 0o4) + '\066', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + '\061' + chr(0b110011) + chr(0b110110 + 0o1), 40450 - 40442)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + '\x6f' + '\x35' + '\x30', ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b';'), '\144' + '\145' + chr(0b1100011) + chr(0b1101111) + chr(7988 - 7888) + chr(101))(chr(2827 - 2710) + chr(0b1101110 + 0o6) + chr(0b1100110) + chr(0b101101) + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def qjrd8MLM_iSd(v850snntN8PO): if v850snntN8PO[roI3spqORKae(ES5oEprVxulp(b'c\x8d\xdcW\xda'), chr(100) + chr(8479 - 8378) + '\x63' + '\x6f' + '\x64' + chr(0b1100101))(chr(117) + chr(0b110101 + 0o77) + chr(0b1100110) + chr(0b100100 + 0o11) + chr(0b111000))]: return for sJQV_HqS9fgz in v850snntN8PO[roI3spqORKae(ES5oEprVxulp(b'b\x8d\xc2P\xd7\x08-:'), chr(0b1100100) + chr(5161 - 5060) + '\143' + '\157' + '\x64' + '\145')('\165' + '\164' + '\x66' + '\055' + chr(0b111000))]: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'b\x8d\xc2P\xd7\x08-'), chr(0b1000101 + 0o37) + chr(0b1011000 + 0o15) + '\x63' + chr(111) + chr(100) + '\145')(chr(0b10001 + 0o144) + chr(577 - 461) + chr(102) + chr(315 - 270) + '\x38'))(sJQV_HqS9fgz) for oNU3PevgmWAO in v850snntN8PO[roI3spqORKae(ES5oEprVxulp(b'a\x8d\xd2R\xdb\x15'), '\x64' + chr(0b110010 + 0o63) + chr(99) + '\x6f' + chr(0b1100100) + chr(9422 - 9321))('\165' + chr(0b1000000 + 0o64) + chr(9620 - 9518) + chr(0b101101) + '\x38')][nzTpIcepk0o8(chr(1253 - 1205) + '\157' + chr(0b10101 + 0o33), ord("\x08"))][roI3spqORKae(ES5oEprVxulp(b'p\x9e\xc2Q\xcc\x15'), chr(100) + chr(9351 - 9250) + chr(0b1100011) + chr(0b1101111) + chr(4133 - 4033) + '\145')(chr(117) + chr(0b1110100) + '\x66' + chr(0b101101) + chr(0b111000))]: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'd\x85\x81I\xd7\x16\x1a\x1f\x92\x95d='), chr(0b1100100) + chr(0b1100101) + chr(99) + '\x6f' + chr(100) + '\145')(chr(0b1110101) + chr(116) + chr(0b1001011 + 0o33) + chr(1832 - 1787) + chr(56)))(oNU3PevgmWAO[roI3spqORKae(ES5oEprVxulp(b'x\x89\xc3M\xdf\x01/'), chr(9110 - 9010) + chr(0b1100101) + '\143' + '\157' + chr(1575 - 1475) + '\145')(chr(0b1100100 + 0o21) + chr(0b1011111 + 0o25) + chr(0b1010010 + 0o24) + chr(0b101101) + chr(2725 - 2669))]) raise WbNHlDKpyPtQ(roI3spqORKae(ES5oEprVxulp(b'\\\x82\xc6_\xd2\x0f.i\x80\xb1[8\x0f\x17\xf6Y3\xf6\xf3C\xba\x18l\x1a\x16G1\xea\xf0\x90\xde4\xbc\xc0j)t\xcc\x940c\x89\x9e'), chr(0b1011000 + 0o14) + chr(0b1100101) + '\x63' + chr(0b1101111) + '\x64' + '\x65')('\165' + chr(0b1110100) + chr(6305 - 6203) + chr(0b110 + 0o47) + chr(0b111000)))
opencobra/memote
memote/support/consistency_helpers.py
add_reaction_constraints
def add_reaction_constraints(model, reactions, Constraint): """ Add the stoichiometric coefficients as constraints. Parameters ---------- model : optlang.Model The transposed stoichiometric matrix representation. reactions : iterable Container of `cobra.Reaction` instances. Constraint : optlang.Constraint The constraint class for the specific interface. """ constraints = [] for rxn in reactions: expression = add( [c * model.variables[m.id] for m, c in rxn.metabolites.items()]) constraints.append(Constraint(expression, lb=0, ub=0, name=rxn.id)) model.add(constraints)
python
def add_reaction_constraints(model, reactions, Constraint): """ Add the stoichiometric coefficients as constraints. Parameters ---------- model : optlang.Model The transposed stoichiometric matrix representation. reactions : iterable Container of `cobra.Reaction` instances. Constraint : optlang.Constraint The constraint class for the specific interface. """ constraints = [] for rxn in reactions: expression = add( [c * model.variables[m.id] for m, c in rxn.metabolites.items()]) constraints.append(Constraint(expression, lb=0, ub=0, name=rxn.id)) model.add(constraints)
[ "def", "add_reaction_constraints", "(", "model", ",", "reactions", ",", "Constraint", ")", ":", "constraints", "=", "[", "]", "for", "rxn", "in", "reactions", ":", "expression", "=", "add", "(", "[", "c", "*", "model", ".", "variables", "[", "m", ".", "id", "]", "for", "m", ",", "c", "in", "rxn", ".", "metabolites", ".", "items", "(", ")", "]", ")", "constraints", ".", "append", "(", "Constraint", "(", "expression", ",", "lb", "=", "0", ",", "ub", "=", "0", ",", "name", "=", "rxn", ".", "id", ")", ")", "model", ".", "add", "(", "constraints", ")" ]
Add the stoichiometric coefficients as constraints. Parameters ---------- model : optlang.Model The transposed stoichiometric matrix representation. reactions : iterable Container of `cobra.Reaction` instances. Constraint : optlang.Constraint The constraint class for the specific interface.
[ "Add", "the", "stoichiometric", "coefficients", "as", "constraints", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/consistency_helpers.py#L43-L62
train
Adds the stoichiometric coefficients as constraints.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b101111 + 0o4) + chr(148 - 99) + chr(51), 32136 - 32128), nzTpIcepk0o8(chr(48) + '\x6f' + chr(811 - 761) + chr(0b110011) + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(0b100110 + 0o12) + chr(838 - 727) + '\x33' + chr(52) + '\067', 0b1000), nzTpIcepk0o8('\060' + chr(111) + '\062' + chr(53) + chr(0b1111 + 0o42), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b101110 + 0o101) + chr(50) + chr(0b101010 + 0o10) + '\x32', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\063' + chr(0b110000) + '\060', ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + '\x32' + chr(182 - 131) + chr(0b111 + 0o57), 14674 - 14666), nzTpIcepk0o8(chr(48 - 0) + chr(0b111100 + 0o63) + chr(49) + chr(50) + '\067', 45247 - 45239), nzTpIcepk0o8(chr(0b100 + 0o54) + '\x6f' + chr(0b10 + 0o57) + chr(49) + chr(54), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b110010) + chr(49) + '\x33', 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b100001 + 0o20) + chr(624 - 569) + chr(0b110101), 31603 - 31595), nzTpIcepk0o8('\060' + chr(0b10110 + 0o131) + '\x34' + chr(2173 - 2124), 57001 - 56993), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(111) + chr(1551 - 1502) + chr(0b101101 + 0o4) + chr(0b110100), 15376 - 15368), nzTpIcepk0o8(chr(0b101100 + 0o4) + chr(0b100111 + 0o110) + '\063' + chr(0b1101 + 0o43) + chr(0b1111 + 0o47), 0o10), nzTpIcepk0o8(chr(0b101111 + 0o1) + '\x6f' + chr(0b110011) + chr(510 - 460) + chr(2336 - 2287), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(52) + '\065', 7070 - 7062), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b100000 + 0o22) + chr(1835 - 1787) + '\x32', 55193 - 55185), nzTpIcepk0o8(chr(0b10101 + 0o33) + chr(8304 - 8193) + chr(0b11011 + 0o27) + chr(48) + chr(0b101111 + 0o2), 37444 - 37436), nzTpIcepk0o8(chr(48) + chr(3439 - 3328) + '\x31' + chr(1445 - 1392) + chr(55), 0b1000), nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(0b111011 + 0o64) + '\061' + chr(0b11001 + 0o30) + '\060', 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\062' + chr(0b11111 + 0o30), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(52) + '\060', ord("\x08")), nzTpIcepk0o8(chr(726 - 678) + chr(111) + chr(438 - 389) + chr(0b101001 + 0o13) + chr(50), 15892 - 15884), nzTpIcepk0o8(chr(0b110000) + '\157' + '\062' + chr(564 - 512) + chr(0b110000), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + '\062' + chr(0b110101) + chr(0b110100), 0o10), nzTpIcepk0o8('\x30' + chr(0b110000 + 0o77) + chr(0b110001) + chr(0b10100 + 0o34) + chr(1278 - 1226), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x32' + '\x35' + '\062', 7332 - 7324), nzTpIcepk0o8(chr(0b11001 + 0o27) + chr(0b1000000 + 0o57) + chr(171 - 121) + chr(51) + '\067', 8), nzTpIcepk0o8(chr(48) + chr(111) + chr(50) + '\060' + chr(55), 13725 - 13717), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b1001 + 0o50) + '\064' + chr(794 - 740), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x33' + chr(0b101011 + 0o6) + chr(51), 8), nzTpIcepk0o8('\060' + '\157' + chr(0b110011) + chr(0b110111) + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(0b11 + 0o55) + '\157' + chr(53), 10031 - 10023), nzTpIcepk0o8('\x30' + chr(2765 - 2654) + '\063' + chr(914 - 862) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(0b10000 + 0o40) + chr(12296 - 12185) + chr(1827 - 1777) + chr(0b110011 + 0o1) + '\x35', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110010) + chr(0b11001 + 0o30) + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(1975 - 1927) + '\157' + '\062' + chr(53) + chr(315 - 260), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b100110 + 0o14) + chr(1660 - 1605) + '\x37', 25802 - 25794), nzTpIcepk0o8('\x30' + chr(6906 - 6795) + '\x37' + '\x36', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b10000 + 0o41) + chr(0b101111 + 0o2) + chr(2695 - 2642), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + chr(4194 - 4083) + chr(0b110101) + '\060', ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xe5'), chr(0b110001 + 0o63) + '\145' + chr(0b1101 + 0o126) + chr(111) + chr(0b1000100 + 0o40) + '\145')(chr(8021 - 7904) + '\x74' + chr(102) + chr(909 - 864) + chr(3112 - 3056)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def xFU4MVdEqqQg(KW0sEfjlgNpM, wZuIG55W5k2m, C6fmyaLR03e_): WsRXUozGEySJ = [] for cXXyzqlAJbZW in wZuIG55W5k2m: Jni_E12Y8D3Y = u3QdisIqDfCd([teUmM7cKWZUa * KW0sEfjlgNpM.LuMTuvwD9t2e[tF75nqoNENFL.maLnLg8O5zPT] for (tF75nqoNENFL, teUmM7cKWZUa) in cXXyzqlAJbZW.metabolites.Y_nNEzH43vXi()]) roI3spqORKae(WsRXUozGEySJ, roI3spqORKae(ES5oEprVxulp(b'\x83\xcb\xb4\x9d\xea\xa7\xd98$\xe4(\x14'), chr(100) + '\145' + '\143' + chr(0b11101 + 0o122) + chr(100) + chr(101))('\165' + '\x74' + chr(0b11000 + 0o116) + chr(45) + '\070'))(C6fmyaLR03e_(Jni_E12Y8D3Y, lb=nzTpIcepk0o8(chr(2223 - 2175) + chr(11385 - 11274) + chr(0b110000), 0o10), ub=nzTpIcepk0o8(chr(1008 - 960) + '\x6f' + chr(48), 8), name=roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'\xa6\xfe\xab\xc7\xde\xa7\xa6\x18{\xf1-u'), '\144' + chr(0b100000 + 0o105) + chr(8277 - 8178) + chr(0b1101111) + chr(100) + chr(0b1011010 + 0o13))('\165' + chr(0b1100 + 0o150) + chr(0b1100110) + chr(1630 - 1585) + '\x38')))) roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xbe\xac\xb6\xcd\xfb\xb3\xd7&\n\xed>E'), '\144' + '\145' + chr(0b1100011) + '\x6f' + chr(3662 - 3562) + chr(7807 - 7706))(chr(117) + chr(116) + chr(102) + '\055' + chr(0b111000)))(WsRXUozGEySJ)
opencobra/memote
memote/support/consistency_helpers.py
stoichiometry_matrix
def stoichiometry_matrix(metabolites, reactions): """ Return the stoichiometry matrix representation of a set of reactions. The reactions and metabolites order is respected. All metabolites are expected to be contained and complete in terms of the reactions. Parameters ---------- reactions : iterable A somehow ordered list of unique reactions. metabolites : iterable A somehow ordered list of unique metabolites. Returns ------- numpy.array The 2D array that represents the stoichiometry matrix. dict A dictionary mapping metabolites to row indexes. dict A dictionary mapping reactions to column indexes. """ matrix = np.zeros((len(metabolites), len(reactions))) met_index = dict((met, i) for i, met in enumerate(metabolites)) rxn_index = dict() for i, rxn in enumerate(reactions): rxn_index[rxn] = i for met, coef in iteritems(rxn.metabolites): j = met_index[met] matrix[j, i] = coef return matrix, met_index, rxn_index
python
def stoichiometry_matrix(metabolites, reactions): """ Return the stoichiometry matrix representation of a set of reactions. The reactions and metabolites order is respected. All metabolites are expected to be contained and complete in terms of the reactions. Parameters ---------- reactions : iterable A somehow ordered list of unique reactions. metabolites : iterable A somehow ordered list of unique metabolites. Returns ------- numpy.array The 2D array that represents the stoichiometry matrix. dict A dictionary mapping metabolites to row indexes. dict A dictionary mapping reactions to column indexes. """ matrix = np.zeros((len(metabolites), len(reactions))) met_index = dict((met, i) for i, met in enumerate(metabolites)) rxn_index = dict() for i, rxn in enumerate(reactions): rxn_index[rxn] = i for met, coef in iteritems(rxn.metabolites): j = met_index[met] matrix[j, i] = coef return matrix, met_index, rxn_index
[ "def", "stoichiometry_matrix", "(", "metabolites", ",", "reactions", ")", ":", "matrix", "=", "np", ".", "zeros", "(", "(", "len", "(", "metabolites", ")", ",", "len", "(", "reactions", ")", ")", ")", "met_index", "=", "dict", "(", "(", "met", ",", "i", ")", "for", "i", ",", "met", "in", "enumerate", "(", "metabolites", ")", ")", "rxn_index", "=", "dict", "(", ")", "for", "i", ",", "rxn", "in", "enumerate", "(", "reactions", ")", ":", "rxn_index", "[", "rxn", "]", "=", "i", "for", "met", ",", "coef", "in", "iteritems", "(", "rxn", ".", "metabolites", ")", ":", "j", "=", "met_index", "[", "met", "]", "matrix", "[", "j", ",", "i", "]", "=", "coef", "return", "matrix", ",", "met_index", ",", "rxn_index" ]
Return the stoichiometry matrix representation of a set of reactions. The reactions and metabolites order is respected. All metabolites are expected to be contained and complete in terms of the reactions. Parameters ---------- reactions : iterable A somehow ordered list of unique reactions. metabolites : iterable A somehow ordered list of unique metabolites. Returns ------- numpy.array The 2D array that represents the stoichiometry matrix. dict A dictionary mapping metabolites to row indexes. dict A dictionary mapping reactions to column indexes.
[ "Return", "the", "stoichiometry", "matrix", "representation", "of", "a", "set", "of", "reactions", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/consistency_helpers.py#L65-L97
train
Returns the stoichiometry matrix representation of a set of reactions.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(111) + chr(0b110001) + '\067' + chr(953 - 899), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(998 - 949) + '\063' + '\063', 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110000 + 0o2) + chr(0b110001) + chr(0b110010), ord("\x08")), nzTpIcepk0o8('\060' + chr(8945 - 8834) + chr(0b110010) + chr(0b11000 + 0o35), 53561 - 53553), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x34' + '\064', ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\062' + chr(0b110010) + chr(55), 24450 - 24442), nzTpIcepk0o8(chr(48) + '\157' + chr(50) + chr(0b110010) + '\065', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x36' + chr(0b110000), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\061' + chr(0b10111 + 0o36) + chr(53), 0o10), nzTpIcepk0o8('\060' + chr(0b10011 + 0o134) + chr(54) + chr(50), 49747 - 49739), nzTpIcepk0o8(chr(1433 - 1385) + '\157' + chr(1061 - 1012) + chr(0b101101 + 0o5), ord("\x08")), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(0b111101 + 0o62) + chr(50) + chr(0b110111) + chr(50), 24218 - 24210), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\064' + chr(0b110110), 61842 - 61834), nzTpIcepk0o8(chr(0b100010 + 0o16) + chr(0b1101111) + chr(0b110010) + chr(49) + chr(2793 - 2739), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(2376 - 2326) + '\x33' + chr(54), 0b1000), nzTpIcepk0o8(chr(1918 - 1870) + chr(8067 - 7956) + chr(0b1111 + 0o44) + '\064' + chr(0b110011), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1011000 + 0o27) + '\x31', 51176 - 51168), nzTpIcepk0o8(chr(0b100010 + 0o16) + '\x6f' + chr(0b110011) + '\064' + chr(0b101011 + 0o6), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b11001 + 0o31) + chr(0b110011 + 0o0) + chr(52), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(50) + chr(0b110001), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110010) + '\065' + chr(50), 0o10), nzTpIcepk0o8(chr(48) + chr(9293 - 9182) + '\063' + '\060' + chr(0b11101 + 0o27), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + '\062' + chr(0b110001) + chr(0b110000), ord("\x08")), nzTpIcepk0o8(chr(0b100100 + 0o14) + '\157' + '\061' + chr(0b110110) + chr(0b101011 + 0o10), 0o10), nzTpIcepk0o8(chr(225 - 177) + chr(0b1001111 + 0o40) + chr(2261 - 2210) + chr(2675 - 2621) + chr(0b11010 + 0o27), 20594 - 20586), nzTpIcepk0o8(chr(433 - 385) + '\x6f' + chr(0b110001) + chr(437 - 386) + chr(0b110010), 31600 - 31592), nzTpIcepk0o8(chr(0b11010 + 0o26) + '\157' + chr(1890 - 1840) + chr(0b110000) + chr(54), 0o10), nzTpIcepk0o8(chr(0b111 + 0o51) + '\x6f' + chr(0b110001 + 0o2) + '\x32' + chr(0b110110), 43946 - 43938), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(598 - 548) + chr(0b110011) + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(12016 - 11905) + chr(0b110010) + chr(903 - 850), 8), nzTpIcepk0o8(chr(0b110000) + chr(0b1101011 + 0o4) + chr(51) + chr(54) + '\x37', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(49) + chr(50) + chr(0b110010), 0o10), nzTpIcepk0o8('\060' + '\157' + chr(51) + chr(0b11111 + 0o22) + chr(49), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110011) + chr(2035 - 1985) + chr(0b110001), 31360 - 31352), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b11110 + 0o24) + chr(361 - 306) + chr(51), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b110111 + 0o70) + chr(0b110011) + '\x35' + chr(0b1 + 0o61), 0o10), nzTpIcepk0o8(chr(1397 - 1349) + chr(1773 - 1662) + chr(51) + chr(0b110101) + '\x34', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\063' + '\x36' + chr(150 - 100), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(49) + chr(0b110101) + chr(48), 0o10), nzTpIcepk0o8(chr(1965 - 1917) + chr(0b1101111) + chr(50), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + '\157' + chr(53) + chr(0b100001 + 0o17), ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'P'), chr(100) + chr(975 - 874) + '\143' + chr(0b1101111) + chr(0b1010100 + 0o20) + chr(0b1100101))(chr(117) + chr(229 - 113) + chr(102) + chr(331 - 286) + chr(975 - 919)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def FiJwjmhSEfVZ(nEF0RXSdESqB, wZuIG55W5k2m): kcnyYx1RySWO = nDF4gVNx0u9Q.UmwwEp7MzR6q((ftfygxgFas5X(nEF0RXSdESqB), ftfygxgFas5X(wZuIG55W5k2m))) hpDXR5DQlCNe = znjnJWK64FDT(((dYApxmRvGyhb, ZlbFMSG8gCoF) for (ZlbFMSG8gCoF, dYApxmRvGyhb) in _kV_Bomx8PZ4(nEF0RXSdESqB))) xec72hGn6zW6 = znjnJWK64FDT() for (ZlbFMSG8gCoF, cXXyzqlAJbZW) in _kV_Bomx8PZ4(wZuIG55W5k2m): xec72hGn6zW6[cXXyzqlAJbZW] = ZlbFMSG8gCoF for (dYApxmRvGyhb, twRKeb6oMfIh) in tcSkjcrLksk1(roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'\x13>\xfetF\xf8\xf9Y\x19Wy'), chr(0b111111 + 0o45) + '\145' + '\143' + chr(9682 - 9571) + chr(0b11 + 0o141) + chr(4371 - 4270))(chr(0b1110101) + chr(0b11110 + 0o126) + chr(0b100011 + 0o103) + '\x2d' + chr(0b11011 + 0o35)))): sChW4gUsXrIC = hpDXR5DQlCNe[dYApxmRvGyhb] kcnyYx1RySWO[sChW4gUsXrIC, ZlbFMSG8gCoF] = twRKeb6oMfIh return (kcnyYx1RySWO, hpDXR5DQlCNe, xec72hGn6zW6)
opencobra/memote
memote/support/consistency_helpers.py
rank
def rank(matrix, atol=1e-13, rtol=0): """ Estimate the rank, i.e., the dimension of the column space, of a matrix. The algorithm used by this function is based on the singular value decomposition of `stoichiometry_matrix`. Parameters ---------- matrix : ndarray The matrix should be at most 2-D. A 1-D array with length k will be treated as a 2-D with shape (1, k) atol : float The absolute tolerance for a zero singular value. Singular values smaller than ``atol`` are considered to be zero. rtol : float The relative tolerance for a zero singular value. Singular values less than the relative tolerance times the largest singular value are considered to be zero. Notes ----- If both `atol` and `rtol` are positive, the combined tolerance is the maximum of the two; that is:: tol = max(atol, rtol * smax) Singular values smaller than ``tol`` are considered to be zero. Returns ------- int The estimated rank of the matrix. See Also -------- numpy.linalg.matrix_rank matrix_rank is basically the same as this function, but it does not provide the option of the absolute tolerance. """ matrix = np.atleast_2d(matrix) sigma = svd(matrix, compute_uv=False) tol = max(atol, rtol * sigma[0]) return int((sigma >= tol).sum())
python
def rank(matrix, atol=1e-13, rtol=0): """ Estimate the rank, i.e., the dimension of the column space, of a matrix. The algorithm used by this function is based on the singular value decomposition of `stoichiometry_matrix`. Parameters ---------- matrix : ndarray The matrix should be at most 2-D. A 1-D array with length k will be treated as a 2-D with shape (1, k) atol : float The absolute tolerance for a zero singular value. Singular values smaller than ``atol`` are considered to be zero. rtol : float The relative tolerance for a zero singular value. Singular values less than the relative tolerance times the largest singular value are considered to be zero. Notes ----- If both `atol` and `rtol` are positive, the combined tolerance is the maximum of the two; that is:: tol = max(atol, rtol * smax) Singular values smaller than ``tol`` are considered to be zero. Returns ------- int The estimated rank of the matrix. See Also -------- numpy.linalg.matrix_rank matrix_rank is basically the same as this function, but it does not provide the option of the absolute tolerance. """ matrix = np.atleast_2d(matrix) sigma = svd(matrix, compute_uv=False) tol = max(atol, rtol * sigma[0]) return int((sigma >= tol).sum())
[ "def", "rank", "(", "matrix", ",", "atol", "=", "1e-13", ",", "rtol", "=", "0", ")", ":", "matrix", "=", "np", ".", "atleast_2d", "(", "matrix", ")", "sigma", "=", "svd", "(", "matrix", ",", "compute_uv", "=", "False", ")", "tol", "=", "max", "(", "atol", ",", "rtol", "*", "sigma", "[", "0", "]", ")", "return", "int", "(", "(", "sigma", ">=", "tol", ")", ".", "sum", "(", ")", ")" ]
Estimate the rank, i.e., the dimension of the column space, of a matrix. The algorithm used by this function is based on the singular value decomposition of `stoichiometry_matrix`. Parameters ---------- matrix : ndarray The matrix should be at most 2-D. A 1-D array with length k will be treated as a 2-D with shape (1, k) atol : float The absolute tolerance for a zero singular value. Singular values smaller than ``atol`` are considered to be zero. rtol : float The relative tolerance for a zero singular value. Singular values less than the relative tolerance times the largest singular value are considered to be zero. Notes ----- If both `atol` and `rtol` are positive, the combined tolerance is the maximum of the two; that is:: tol = max(atol, rtol * smax) Singular values smaller than ``tol`` are considered to be zero. Returns ------- int The estimated rank of the matrix. See Also -------- numpy.linalg.matrix_rank matrix_rank is basically the same as this function, but it does not provide the option of the absolute tolerance.
[ "Estimate", "the", "rank", "i", ".", "e", ".", "the", "dimension", "of", "the", "column", "space", "of", "a", "matrix", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/consistency_helpers.py#L100-L144
train
Estimate the rank of a set of items in the column space of a given matrix.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + '\x6f' + '\x31' + '\x37' + chr(0b110100), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b10001 + 0o41) + '\065' + '\063', 0o10), nzTpIcepk0o8(chr(135 - 87) + chr(10701 - 10590) + chr(421 - 371) + chr(0b110001 + 0o1) + '\x30', 6506 - 6498), nzTpIcepk0o8(chr(478 - 430) + chr(0b1101111) + chr(50) + chr(48) + '\064', 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\x34' + chr(0b101 + 0o61), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110010) + '\065' + chr(0b11111 + 0o22), 7630 - 7622), nzTpIcepk0o8('\060' + '\157' + chr(55) + '\061', 0o10), nzTpIcepk0o8(chr(1539 - 1491) + chr(0b1001000 + 0o47) + chr(0b110001) + '\063' + chr(0b110 + 0o60), ord("\x08")), nzTpIcepk0o8(chr(1345 - 1297) + '\157' + chr(0b110001) + '\x31', 0o10), nzTpIcepk0o8(chr(0b101010 + 0o6) + chr(0b1101110 + 0o1) + chr(0b110001) + chr(49) + chr(52), 31545 - 31537), nzTpIcepk0o8('\x30' + '\x6f' + chr(50) + chr(772 - 718) + chr(51), 0b1000), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(0b1101111) + '\x37' + chr(1886 - 1836), 60551 - 60543), nzTpIcepk0o8(chr(595 - 547) + chr(0b1101111) + chr(50) + '\065', 1213 - 1205), nzTpIcepk0o8('\x30' + '\157' + '\063' + '\064' + chr(49), 0o10), nzTpIcepk0o8(chr(1788 - 1740) + chr(0b1101111) + chr(0b1110 + 0o43) + '\062' + '\x37', 0o10), nzTpIcepk0o8(chr(0b1001 + 0o47) + '\157' + chr(0b110 + 0o54) + chr(464 - 415) + chr(280 - 227), 10195 - 10187), nzTpIcepk0o8(chr(48) + chr(0b1010001 + 0o36) + '\x33' + chr(0b100001 + 0o26) + '\061', 14097 - 14089), nzTpIcepk0o8('\x30' + chr(0b101110 + 0o101) + '\x31' + chr(50) + chr(434 - 383), 0o10), nzTpIcepk0o8('\060' + chr(0b1000 + 0o147) + chr(791 - 740) + chr(0b110101) + '\064', 0b1000), nzTpIcepk0o8(chr(1377 - 1329) + '\157' + '\x31' + '\063' + '\067', 22102 - 22094), nzTpIcepk0o8(chr(0b10101 + 0o33) + chr(111) + '\063' + chr(0b1001 + 0o54) + chr(0b110000 + 0o4), 8), nzTpIcepk0o8('\x30' + chr(0b1101010 + 0o5) + '\x34', 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + '\x32' + chr(49) + '\x31', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(52) + '\x31', 7430 - 7422), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x31' + chr(312 - 262) + chr(53), 0o10), nzTpIcepk0o8(chr(420 - 372) + '\157' + chr(49) + '\x36' + chr(51), 5006 - 4998), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1419 - 1370) + chr(0b110010) + chr(0b110011), 8), nzTpIcepk0o8(chr(834 - 786) + '\157' + chr(51) + chr(0b10111 + 0o36) + '\061', ord("\x08")), nzTpIcepk0o8(chr(1697 - 1649) + chr(4485 - 4374) + chr(51) + '\x31' + chr(49), 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(1008 - 958) + '\x35' + chr(0b110101), 0o10), nzTpIcepk0o8(chr(1400 - 1352) + chr(0b1101111) + chr(739 - 690) + chr(162 - 111) + chr(181 - 133), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(49) + chr(53), 21461 - 21453), nzTpIcepk0o8('\x30' + chr(12177 - 12066) + chr(0b110010) + chr(0b101100 + 0o12) + '\066', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\063' + chr(2535 - 2480) + '\x34', 29720 - 29712), nzTpIcepk0o8(chr(48) + chr(111) + '\062' + '\064' + chr(0b101000 + 0o12), 0o10), nzTpIcepk0o8(chr(0b101110 + 0o2) + '\157' + chr(0b1000 + 0o51) + chr(0b110101) + chr(1167 - 1116), 62636 - 62628), nzTpIcepk0o8(chr(48) + chr(0b1 + 0o156) + chr(0b110101) + '\064', 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(51) + chr(0b110111) + chr(49), 8), nzTpIcepk0o8(chr(0b11 + 0o55) + '\157' + chr(0b101011 + 0o7) + chr(0b101010 + 0o14) + chr(0b11110 + 0o22), ord("\x08")), nzTpIcepk0o8(chr(0b11 + 0o55) + chr(0b1101111) + chr(0b110011) + '\063' + chr(0b110011 + 0o2), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + chr(0b110 + 0o151) + chr(880 - 827) + chr(0b100111 + 0o11), 39613 - 39605)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'R'), '\x64' + chr(3218 - 3117) + '\x63' + chr(111) + '\x64' + '\x65')(chr(0b1110101) + chr(0b1110100) + '\146' + chr(800 - 755) + chr(2442 - 2386)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def KIpP0GrF7ItG(kcnyYx1RySWO, zNgXxNAMxY5t=1e-13, y1RO0EXVYr0w=nzTpIcepk0o8(chr(0b0 + 0o60) + '\157' + chr(0b10001 + 0o37), ord("\x08"))): kcnyYx1RySWO = nDF4gVNx0u9Q.atleast_2d(kcnyYx1RySWO) uc4gGmjAvJP3 = skFcYlV5vAy2(kcnyYx1RySWO, compute_uv=nzTpIcepk0o8('\x30' + chr(111) + chr(532 - 484), 8)) SbzLZQEjyfWL = KV9ckIhroIia(zNgXxNAMxY5t, y1RO0EXVYr0w * uc4gGmjAvJP3[nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(0b100 + 0o153) + chr(48), 8)]) return nzTpIcepk0o8(roI3spqORKae(uc4gGmjAvJP3 >= SbzLZQEjyfWL, roI3spqORKae(ES5oEprVxulp(b'\x13\xc8\xfc\xc7\x1e\xedu4H\x13\xdfl'), chr(3012 - 2912) + chr(8297 - 8196) + chr(99) + chr(0b1011 + 0o144) + '\144' + chr(101))(chr(2534 - 2417) + '\164' + '\x66' + '\055' + '\070'))())
opencobra/memote
memote/support/consistency_helpers.py
nullspace
def nullspace(matrix, atol=1e-13, rtol=0.0): # noqa: D402 """ Compute an approximate basis for the null space (kernel) of a matrix. The algorithm used by this function is based on the singular value decomposition of the given matrix. Parameters ---------- matrix : ndarray The matrix should be at most 2-D. A 1-D array with length k will be treated as a 2-D with shape (1, k) atol : float The absolute tolerance for a zero singular value. Singular values smaller than ``atol`` are considered to be zero. rtol : float The relative tolerance for a zero singular value. Singular values less than the relative tolerance times the largest singular value are considered to be zero. Notes ----- If both `atol` and `rtol` are positive, the combined tolerance is the maximum of the two; that is:: tol = max(atol, rtol * smax) Singular values smaller than ``tol`` are considered to be zero. Returns ------- ndarray If ``matrix`` is an array with shape (m, k), then the returned nullspace will be an array with shape ``(k, n)``, where n is the estimated dimension of the nullspace. References ---------- Adapted from: https://scipy.github.io/old-wiki/pages/Cookbook/RankNullspace.html """ matrix = np.atleast_2d(matrix) _, sigma, vh = svd(matrix) tol = max(atol, rtol * sigma[0]) num_nonzero = (sigma >= tol).sum() return vh[num_nonzero:].conj().T
python
def nullspace(matrix, atol=1e-13, rtol=0.0): # noqa: D402 """ Compute an approximate basis for the null space (kernel) of a matrix. The algorithm used by this function is based on the singular value decomposition of the given matrix. Parameters ---------- matrix : ndarray The matrix should be at most 2-D. A 1-D array with length k will be treated as a 2-D with shape (1, k) atol : float The absolute tolerance for a zero singular value. Singular values smaller than ``atol`` are considered to be zero. rtol : float The relative tolerance for a zero singular value. Singular values less than the relative tolerance times the largest singular value are considered to be zero. Notes ----- If both `atol` and `rtol` are positive, the combined tolerance is the maximum of the two; that is:: tol = max(atol, rtol * smax) Singular values smaller than ``tol`` are considered to be zero. Returns ------- ndarray If ``matrix`` is an array with shape (m, k), then the returned nullspace will be an array with shape ``(k, n)``, where n is the estimated dimension of the nullspace. References ---------- Adapted from: https://scipy.github.io/old-wiki/pages/Cookbook/RankNullspace.html """ matrix = np.atleast_2d(matrix) _, sigma, vh = svd(matrix) tol = max(atol, rtol * sigma[0]) num_nonzero = (sigma >= tol).sum() return vh[num_nonzero:].conj().T
[ "def", "nullspace", "(", "matrix", ",", "atol", "=", "1e-13", ",", "rtol", "=", "0.0", ")", ":", "# noqa: D402", "matrix", "=", "np", ".", "atleast_2d", "(", "matrix", ")", "_", ",", "sigma", ",", "vh", "=", "svd", "(", "matrix", ")", "tol", "=", "max", "(", "atol", ",", "rtol", "*", "sigma", "[", "0", "]", ")", "num_nonzero", "=", "(", "sigma", ">=", "tol", ")", ".", "sum", "(", ")", "return", "vh", "[", "num_nonzero", ":", "]", ".", "conj", "(", ")", ".", "T" ]
Compute an approximate basis for the null space (kernel) of a matrix. The algorithm used by this function is based on the singular value decomposition of the given matrix. Parameters ---------- matrix : ndarray The matrix should be at most 2-D. A 1-D array with length k will be treated as a 2-D with shape (1, k) atol : float The absolute tolerance for a zero singular value. Singular values smaller than ``atol`` are considered to be zero. rtol : float The relative tolerance for a zero singular value. Singular values less than the relative tolerance times the largest singular value are considered to be zero. Notes ----- If both `atol` and `rtol` are positive, the combined tolerance is the maximum of the two; that is:: tol = max(atol, rtol * smax) Singular values smaller than ``tol`` are considered to be zero. Returns ------- ndarray If ``matrix`` is an array with shape (m, k), then the returned nullspace will be an array with shape ``(k, n)``, where n is the estimated dimension of the nullspace. References ---------- Adapted from: https://scipy.github.io/old-wiki/pages/Cookbook/RankNullspace.html
[ "Compute", "an", "approximate", "basis", "for", "the", "null", "space", "(", "kernel", ")", "of", "a", "matrix", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/consistency_helpers.py#L147-L193
train
Compute an approximate null space for a given matrix.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(2246 - 2198) + '\x6f' + chr(410 - 360) + chr(2066 - 2014) + chr(1784 - 1735), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(50) + chr(1521 - 1472) + '\065', 30693 - 30685), nzTpIcepk0o8('\060' + '\157' + chr(51) + chr(1900 - 1846) + chr(0b110000), 60403 - 60395), nzTpIcepk0o8('\060' + '\157' + '\062' + chr(0b110010) + chr(51), 29625 - 29617), nzTpIcepk0o8(chr(1348 - 1300) + chr(5633 - 5522) + chr(0b110010 + 0o0) + '\065' + '\x34', 0o10), nzTpIcepk0o8(chr(0b11101 + 0o23) + chr(0b1101011 + 0o4) + chr(54) + '\x30', 15674 - 15666), nzTpIcepk0o8(chr(0b1 + 0o57) + '\157' + chr(53) + '\060', ord("\x08")), nzTpIcepk0o8(chr(1470 - 1422) + '\157' + chr(0b110001) + chr(2255 - 2201) + chr(52), 6801 - 6793), nzTpIcepk0o8(chr(0b110000) + chr(0b1010011 + 0o34) + chr(1481 - 1431) + chr(53) + chr(1358 - 1303), 0b1000), nzTpIcepk0o8(chr(359 - 311) + chr(3211 - 3100) + chr(0b101110 + 0o5) + '\062' + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1100 + 0o143) + '\062' + chr(0b10111 + 0o37) + chr(52), 0b1000), nzTpIcepk0o8(chr(48) + chr(5122 - 5011) + chr(49) + '\x35' + chr(0b1110 + 0o42), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1001001 + 0o46) + chr(0b10 + 0o65), ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\062' + chr(0b110000) + chr(48), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1000011 + 0o54) + chr(51) + chr(0b1100 + 0o46), ord("\x08")), nzTpIcepk0o8(chr(2118 - 2070) + chr(111) + chr(0b110011) + chr(0b110000) + chr(2113 - 2063), 0o10), nzTpIcepk0o8(chr(1420 - 1372) + chr(111) + chr(0b10111 + 0o32) + chr(50) + chr(587 - 537), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(51) + chr(0b110000) + '\067', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b110 + 0o151) + chr(0b110011) + chr(0b110110) + chr(48), 8), nzTpIcepk0o8(chr(48) + chr(1279 - 1168) + '\062' + chr(55) + chr(215 - 160), 0o10), nzTpIcepk0o8(chr(0b11010 + 0o26) + '\x6f' + '\x32' + chr(0b110010) + chr(0b11100 + 0o32), 12586 - 12578), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110101) + chr(0b10011 + 0o44), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1100 + 0o143) + chr(0b10010 + 0o41) + chr(229 - 177), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b111010 + 0o65) + chr(0b110010) + chr(0b1101 + 0o52) + chr(54), ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + chr(556 - 507) + chr(0b100 + 0o62) + chr(0b1011 + 0o52), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001) + chr(0b100100 + 0o22), 0o10), nzTpIcepk0o8(chr(1604 - 1556) + chr(111) + chr(0b110001) + '\x32' + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b10111 + 0o33) + chr(0b110000) + chr(0b110101), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + '\067' + chr(1002 - 948), 0o10), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(1809 - 1698) + chr(0b11110 + 0o24) + chr(0b100100 + 0o15) + '\067', 0o10), nzTpIcepk0o8(chr(0b100 + 0o54) + chr(0b1101111) + '\x33' + '\066' + '\x37', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + '\x31' + chr(0b110001) + chr(54), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(322 - 272) + chr(54) + '\060', 0o10), nzTpIcepk0o8(chr(596 - 548) + chr(111) + chr(272 - 223) + '\065' + chr(48), 8), nzTpIcepk0o8(chr(48) + '\x6f' + '\x33' + '\x36' + chr(0b110101), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b101010 + 0o11) + '\x31' + chr(0b110001), 35040 - 35032), nzTpIcepk0o8(chr(0b10011 + 0o35) + chr(0b1101011 + 0o4) + chr(0b1000 + 0o52) + chr(0b110 + 0o54), 0o10), nzTpIcepk0o8(chr(1446 - 1398) + '\157' + chr(0b101010 + 0o7) + '\x33' + chr(818 - 763), 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\063' + chr(1950 - 1897) + '\063', 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(925 - 875) + '\x31' + '\065', 8)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + '\157' + chr(0b110011 + 0o2) + '\x30', 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x8f'), chr(0b1100100) + chr(101) + chr(0b110101 + 0o56) + '\x6f' + '\144' + chr(0b1100101))(chr(0b1110101) + '\x74' + chr(0b1000101 + 0o41) + chr(1828 - 1783) + chr(2599 - 2543)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def lK4qJS8yqzdl(kcnyYx1RySWO, zNgXxNAMxY5t=1e-13, y1RO0EXVYr0w=0.0): kcnyYx1RySWO = nDF4gVNx0u9Q.atleast_2d(kcnyYx1RySWO) (zIqcgNgQ9U6F, uc4gGmjAvJP3, Dt9im2TwnCoa) = skFcYlV5vAy2(kcnyYx1RySWO) SbzLZQEjyfWL = KV9ckIhroIia(zNgXxNAMxY5t, y1RO0EXVYr0w * uc4gGmjAvJP3[nzTpIcepk0o8('\x30' + chr(0b101010 + 0o105) + chr(0b1011 + 0o45), 0b1000)]) cEyqq5uz5Eev = (uc4gGmjAvJP3 >= SbzLZQEjyfWL).oclC8DLjA_lV() return roI3spqORKae(Dt9im2TwnCoa[cEyqq5uz5Eev:].conj(), roI3spqORKae(ES5oEprVxulp(b'\xc9\xfc\xc6\xcb\xe9\x04w:\xc7\xb7\x82:'), chr(7032 - 6932) + chr(8490 - 8389) + '\143' + chr(0b1101111) + chr(0b100011 + 0o101) + '\x65')(chr(4756 - 4639) + chr(0b1011 + 0o151) + chr(0b1100110) + chr(45) + chr(56)))
opencobra/memote
memote/support/consistency_helpers.py
get_interface
def get_interface(model): """ Return the interface specific classes. Parameters ---------- model : cobra.Model The metabolic model under investigation. """ return ( model.solver.interface.Model, model.solver.interface.Constraint, model.solver.interface.Variable, model.solver.interface.Objective )
python
def get_interface(model): """ Return the interface specific classes. Parameters ---------- model : cobra.Model The metabolic model under investigation. """ return ( model.solver.interface.Model, model.solver.interface.Constraint, model.solver.interface.Variable, model.solver.interface.Objective )
[ "def", "get_interface", "(", "model", ")", ":", "return", "(", "model", ".", "solver", ".", "interface", ".", "Model", ",", "model", ".", "solver", ".", "interface", ".", "Constraint", ",", "model", ".", "solver", ".", "interface", ".", "Variable", ",", "model", ".", "solver", ".", "interface", ".", "Objective", ")" ]
Return the interface specific classes. Parameters ---------- model : cobra.Model The metabolic model under investigation.
[ "Return", "the", "interface", "specific", "classes", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/consistency_helpers.py#L197-L212
train
Returns the interface specific classes.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(0b101100 + 0o103) + chr(50) + chr(0b100010 + 0o20) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(0b11001 + 0o27) + chr(2463 - 2352) + '\063' + chr(0b110000) + chr(1177 - 1129), 0o10), nzTpIcepk0o8(chr(48) + chr(0b100101 + 0o112) + chr(51) + chr(0b1011 + 0o46) + chr(50), 57968 - 57960), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b1010 + 0o47) + chr(0b10010 + 0o37) + '\x31', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110011) + chr(51) + chr(55), 0b1000), nzTpIcepk0o8(chr(48) + chr(5685 - 5574) + chr(0b110010) + chr(50) + '\061', 52412 - 52404), nzTpIcepk0o8(chr(0b11001 + 0o27) + '\157' + chr(0b110010) + chr(2490 - 2435) + chr(0b110000), 30929 - 30921), nzTpIcepk0o8(chr(1079 - 1031) + chr(0b1 + 0o156) + '\x32' + '\x37', ord("\x08")), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(0b1101111) + '\x31' + chr(0b100100 + 0o21) + chr(1862 - 1809), 0o10), nzTpIcepk0o8('\x30' + chr(9339 - 9228) + chr(0b110000 + 0o2) + chr(1017 - 969) + chr(2397 - 2346), 0b1000), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(10886 - 10775) + '\062' + '\064' + chr(0b110000 + 0o4), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(51) + chr(513 - 465) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(1602 - 1554) + chr(0b1101111) + chr(2082 - 2032) + '\x30' + '\067', 0o10), nzTpIcepk0o8('\060' + chr(11709 - 11598) + '\x33' + chr(1133 - 1078) + chr(0b110010), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(582 - 531) + chr(51) + '\067', 8), nzTpIcepk0o8(chr(0b101011 + 0o5) + chr(111) + '\x32' + chr(54), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\067' + '\060', 8431 - 8423), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x32' + chr(2294 - 2246) + chr(2379 - 2328), 8), nzTpIcepk0o8(chr(0b110000) + chr(8868 - 8757) + chr(0b100000 + 0o22) + chr(0b110010), 10781 - 10773), nzTpIcepk0o8(chr(0b11111 + 0o21) + '\x6f' + chr(0b110011) + chr(53) + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(10306 - 10195) + '\x31' + chr(0b111 + 0o60) + '\x32', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + '\x32' + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1562 - 1513) + chr(1645 - 1597) + chr(0b110100), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b1011 + 0o51) + chr(0b110011 + 0o3), 57241 - 57233), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(50) + '\x37' + '\063', 0o10), nzTpIcepk0o8(chr(0b100011 + 0o15) + '\157' + '\x37' + '\066', ord("\x08")), nzTpIcepk0o8(chr(673 - 625) + '\157' + chr(0b11011 + 0o26) + '\061' + chr(2258 - 2209), 8), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x32' + chr(0b10110 + 0o40) + chr(0b110101 + 0o1), 0b1000), nzTpIcepk0o8(chr(2087 - 2039) + chr(111) + '\062' + chr(850 - 799) + chr(50), 46871 - 46863), nzTpIcepk0o8(chr(1392 - 1344) + '\x6f' + chr(338 - 288) + chr(53) + '\x36', 0o10), nzTpIcepk0o8(chr(48) + chr(0b101011 + 0o104) + chr(51) + chr(2388 - 2338) + chr(0b110011), 0b1000), nzTpIcepk0o8('\060' + chr(10262 - 10151) + chr(0b110001) + '\x37' + chr(0b10 + 0o56), 46709 - 46701), nzTpIcepk0o8(chr(0b110 + 0o52) + '\x6f' + '\063' + '\x33' + chr(1215 - 1161), 48350 - 48342), nzTpIcepk0o8(chr(2059 - 2011) + chr(0b1101111) + chr(50) + chr(2237 - 2187) + chr(0b1001 + 0o53), 550 - 542), nzTpIcepk0o8('\060' + chr(0b10101 + 0o132) + chr(1989 - 1940) + '\x37' + chr(2394 - 2340), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b100011 + 0o114) + chr(0b110011) + chr(0b1101 + 0o51) + chr(773 - 723), ord("\x08")), nzTpIcepk0o8(chr(0b100000 + 0o20) + '\157' + chr(0b11 + 0o60) + '\065' + chr(1547 - 1498), 0o10), nzTpIcepk0o8(chr(2208 - 2160) + chr(0b1101111) + '\x31' + chr(53) + chr(0b11100 + 0o31), 8), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x34' + '\x35', 0b1000), nzTpIcepk0o8(chr(0b10111 + 0o31) + '\157' + chr(877 - 827) + chr(0b110001) + '\x34', 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + '\x6f' + chr(0b110101) + '\x30', 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xbd'), '\144' + chr(0b1010001 + 0o24) + chr(99) + '\157' + '\144' + chr(0b1100101))('\165' + '\164' + '\x66' + chr(361 - 316) + chr(2529 - 2473)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def IcmTX25fA9Cg(KW0sEfjlgNpM): return (roI3spqORKae(KW0sEfjlgNpM.solver.interface, roI3spqORKae(ES5oEprVxulp(b'\xde\xaf\xae,\xb3'), chr(8512 - 8412) + chr(101) + chr(99) + '\x6f' + '\144' + chr(0b111010 + 0o53))('\x75' + chr(0b100100 + 0o120) + chr(5788 - 5686) + chr(45) + chr(56))), roI3spqORKae(KW0sEfjlgNpM.solver.interface, roI3spqORKae(ES5oEprVxulp(b'\xd0\xaf\xa4:\xab\xe3\xd9~\x03\xf7'), '\x64' + '\145' + chr(99) + chr(111) + chr(100) + chr(101))(chr(0b1010 + 0o153) + '\164' + chr(6330 - 6228) + chr(1061 - 1016) + '\x38')), roI3spqORKae(KW0sEfjlgNpM.solver.interface, roI3spqORKae(ES5oEprVxulp(b'\xc5\xa1\xb8 \xbe\xf3\xd4r'), chr(0b1011110 + 0o6) + chr(0b1100101 + 0o0) + '\143' + chr(2413 - 2302) + chr(0b101000 + 0o74) + '\x65')('\x75' + chr(0b1110100) + chr(102) + '\x2d' + chr(3010 - 2954))), roI3spqORKae(KW0sEfjlgNpM.solver.interface, roI3spqORKae(ES5oEprVxulp(b'\xdc\xa2\xa0,\xbc\xe5\xd1a\x08'), chr(100) + chr(3195 - 3094) + chr(99) + chr(111) + chr(0b110100 + 0o60) + '\x65')(chr(0b101100 + 0o111) + chr(116) + chr(10246 - 10144) + chr(45) + chr(0b11110 + 0o32))))
opencobra/memote
memote/support/consistency_helpers.py
get_internals
def get_internals(model): """ Return non-boundary reactions and their metabolites. Boundary reactions are unbalanced by their nature. They are excluded here and only the metabolites of the others are considered. Parameters ---------- model : cobra.Model The metabolic model under investigation. """ biomass = set(find_biomass_reaction(model)) if len(biomass) == 0: LOGGER.warning("No biomass reaction detected. Consistency test results " "are unreliable if one exists.") return set(model.reactions) - (set(model.boundary) | biomass)
python
def get_internals(model): """ Return non-boundary reactions and their metabolites. Boundary reactions are unbalanced by their nature. They are excluded here and only the metabolites of the others are considered. Parameters ---------- model : cobra.Model The metabolic model under investigation. """ biomass = set(find_biomass_reaction(model)) if len(biomass) == 0: LOGGER.warning("No biomass reaction detected. Consistency test results " "are unreliable if one exists.") return set(model.reactions) - (set(model.boundary) | biomass)
[ "def", "get_internals", "(", "model", ")", ":", "biomass", "=", "set", "(", "find_biomass_reaction", "(", "model", ")", ")", "if", "len", "(", "biomass", ")", "==", "0", ":", "LOGGER", ".", "warning", "(", "\"No biomass reaction detected. Consistency test results \"", "\"are unreliable if one exists.\"", ")", "return", "set", "(", "model", ".", "reactions", ")", "-", "(", "set", "(", "model", ".", "boundary", ")", "|", "biomass", ")" ]
Return non-boundary reactions and their metabolites. Boundary reactions are unbalanced by their nature. They are excluded here and only the metabolites of the others are considered. Parameters ---------- model : cobra.Model The metabolic model under investigation.
[ "Return", "non", "-", "boundary", "reactions", "and", "their", "metabolites", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/consistency_helpers.py#L216-L233
train
Returns non - boundary reactions and their metabolites.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(111) + '\061' + '\066' + chr(52), ord("\x08")), nzTpIcepk0o8(chr(764 - 716) + chr(111) + '\063' + chr(0b100010 + 0o21) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b101101 + 0o3) + chr(0b1101101 + 0o2) + '\061' + chr(0b110001 + 0o4) + chr(2550 - 2499), 38741 - 38733), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(879 - 830) + chr(52) + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(1584 - 1536) + chr(111) + chr(49) + '\x34' + chr(0b1101 + 0o45), 0b1000), nzTpIcepk0o8(chr(0b101011 + 0o5) + chr(9434 - 9323) + '\x31' + chr(0b110101) + '\067', 28575 - 28567), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110110) + chr(0b110000), 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\061' + chr(55) + chr(51), 17512 - 17504), nzTpIcepk0o8(chr(48) + chr(111) + chr(51) + chr(688 - 638) + chr(53), 0o10), nzTpIcepk0o8(chr(0b11100 + 0o24) + '\x6f' + '\x33' + '\065' + chr(1170 - 1122), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1010110 + 0o31) + chr(51) + chr(51) + chr(0b100101 + 0o17), 10856 - 10848), nzTpIcepk0o8('\060' + chr(1021 - 910) + chr(50) + '\060', ord("\x08")), nzTpIcepk0o8(chr(454 - 406) + chr(12211 - 12100) + chr(846 - 798), 0o10), nzTpIcepk0o8(chr(1829 - 1781) + '\x6f' + '\063' + chr(0b110000) + chr(0b110010), ord("\x08")), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(0b11001 + 0o126) + chr(635 - 585) + chr(0b100 + 0o54) + '\x32', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(860 - 812), 8), nzTpIcepk0o8(chr(0b10000 + 0o40) + '\157' + '\x32' + '\x34', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(3038 - 2927) + chr(0b100001 + 0o21) + '\064' + chr(54), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\062' + chr(0b110001), 60460 - 60452), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\061' + '\065' + chr(890 - 840), ord("\x08")), nzTpIcepk0o8(chr(1370 - 1322) + chr(360 - 249) + chr(283 - 234) + chr(0b110001) + chr(0b100111 + 0o16), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(50) + chr(48) + chr(0b11101 + 0o31), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110101) + chr(0b100000 + 0o22), 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + '\067' + '\064', 12684 - 12676), nzTpIcepk0o8(chr(0b10010 + 0o36) + chr(2168 - 2057) + '\x33', 0o10), nzTpIcepk0o8(chr(1124 - 1076) + chr(111) + chr(0b110010) + '\x36' + chr(1472 - 1422), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + '\061' + chr(52) + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110010) + chr(0b100100 + 0o23) + '\067', 54375 - 54367), nzTpIcepk0o8('\060' + chr(10722 - 10611) + chr(0b101100 + 0o5) + '\067' + '\x32', 15771 - 15763), nzTpIcepk0o8(chr(547 - 499) + chr(0b10100 + 0o133) + chr(148 - 99) + '\x36' + chr(0b100 + 0o61), 28253 - 28245), nzTpIcepk0o8(chr(1811 - 1763) + chr(3285 - 3174) + chr(840 - 791) + '\x35', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b11100 + 0o123) + chr(49) + '\067' + '\060', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(52) + chr(0b110100), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x31' + '\x36' + chr(1685 - 1634), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\061' + chr(0b1011 + 0o53) + chr(0b100110 + 0o12), 58942 - 58934), nzTpIcepk0o8(chr(0b11110 + 0o22) + chr(8384 - 8273) + chr(0b1000 + 0o51) + chr(0b110010) + chr(0b110100), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(994 - 944) + chr(588 - 538) + chr(0b1 + 0o65), 38343 - 38335), nzTpIcepk0o8('\x30' + '\x6f' + '\x31' + chr(0b111 + 0o60) + '\067', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(10671 - 10560) + chr(0b100101 + 0o14) + chr(0b1001 + 0o52) + chr(343 - 295), 5000 - 4992), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(111) + chr(0b10011 + 0o36) + chr(1146 - 1098) + chr(0b110110), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b11010 + 0o26) + '\157' + '\065' + chr(0b0 + 0o60), ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'Z'), chr(100) + '\x65' + chr(0b1010111 + 0o14) + '\x6f' + chr(8160 - 8060) + chr(1280 - 1179))('\165' + '\x74' + chr(0b1010 + 0o134) + '\055' + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def MSqfRAUC9AMH(KW0sEfjlgNpM): DmcD8U79jU5m = Bvi71nNyvlqO(M5jIeWuDTQkh(KW0sEfjlgNpM)) if ftfygxgFas5X(DmcD8U79jU5m) == nzTpIcepk0o8(chr(48) + '\x6f' + chr(2290 - 2242), 8): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x03\xbe\x19\t\x0b\x01W'), chr(100) + chr(0b10001 + 0o124) + '\x63' + '\x6f' + chr(100) + '\145')(chr(10599 - 10482) + chr(0b1000001 + 0o63) + chr(9441 - 9339) + '\x2d' + chr(56)))(roI3spqORKae(ES5oEprVxulp(b":\xb0K\x05\x0b\x00]\x1a\xa6\x9b\xfcbe\xa3\xe1t}\xc9\x7fJ)\xe3^\x19`\xc6\x04\xdbTUN\x17J\x00\x19'\xe2\x1a6%\r\xff\x1f\x02\x11\x1b\x10\t\xb0\x9b\xa9|t\xb1\xa2af\xc31\x1f#\xf4O\x10j\xd3\x03\xd3\x1fUd\x1e\x04\x1c\x1e1\xb6\x1a /\x07\xab\x18I"), chr(1103 - 1003) + chr(0b1010111 + 0o16) + chr(0b1100011) + '\157' + '\144' + '\x65')('\x75' + chr(0b111101 + 0o67) + '\146' + chr(0b101101) + chr(1591 - 1535))) return Bvi71nNyvlqO(roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x06\xba\n\x04\x16\x06_\x15\xa6'), chr(0b1000101 + 0o37) + chr(816 - 715) + chr(0b101111 + 0o64) + chr(0b1101111) + chr(3090 - 2990) + chr(0b1011000 + 0o15))(chr(0b100000 + 0o125) + '\164' + '\x66' + chr(45) + '\x38'))) - (Bvi71nNyvlqO(roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x16\xb0\x1e\t\x06\x0eB\x02'), chr(8051 - 7951) + chr(0b1100 + 0o131) + chr(7556 - 7457) + '\157' + chr(0b101101 + 0o67) + chr(0b101101 + 0o70))(chr(0b11 + 0o162) + chr(0b111010 + 0o72) + chr(102) + chr(0b1101 + 0o40) + '\070'))) | DmcD8U79jU5m)
opencobra/memote
memote/support/consistency_helpers.py
create_milp_problem
def create_milp_problem(kernel, metabolites, Model, Variable, Constraint, Objective): """ Create the MILP as defined by equation (13) in [1]_. Parameters ---------- kernel : numpy.array A 2-dimensional array that represents the left nullspace of the stoichiometric matrix which is the nullspace of the transpose of the stoichiometric matrix. metabolites : iterable The metabolites in the nullspace. The length of this vector must equal the first dimension of the nullspace. Model : optlang.Model Model class for a specific optlang interface. Variable : optlang.Variable Variable class for a specific optlang interface. Constraint : optlang.Constraint Constraint class for a specific optlang interface. Objective : optlang.Objective Objective class for a specific optlang interface. References ---------- .. [1] Gevorgyan, A., M. G Poolman, and D. A Fell. "Detection of Stoichiometric Inconsistencies in Biomolecular Models." Bioinformatics 24, no. 19 (2008): 2245. """ assert len(metabolites) == kernel.shape[0],\ "metabolite vector and first nullspace dimension must be equal" ns_problem = Model() k_vars = list() for met in metabolites: # The element y[i] of the mass vector. y_var = Variable(met.id) k_var = Variable("k_{}".format(met.id), type="binary") k_vars.append(k_var) ns_problem.add([y_var, k_var]) # This constraint is equivalent to 0 <= y[i] <= k[i]. ns_problem.add(Constraint( y_var - k_var, ub=0, name="switch_{}".format(met.id))) ns_problem.update() # add nullspace constraints for (j, column) in enumerate(kernel.T): expression = sympy.Add( *[coef * ns_problem.variables[met.id] for (met, coef) in zip(metabolites, column) if coef != 0.0]) constraint = Constraint(expression, lb=0, ub=0, name="ns_{}".format(j)) ns_problem.add(constraint) # The objective is to minimize the binary indicators k[i], subject to # the above inequality constraints. ns_problem.objective = Objective(1) ns_problem.objective.set_linear_coefficients( {k_var: 1. for k_var in k_vars}) ns_problem.objective.direction = "min" return ns_problem, k_vars
python
def create_milp_problem(kernel, metabolites, Model, Variable, Constraint, Objective): """ Create the MILP as defined by equation (13) in [1]_. Parameters ---------- kernel : numpy.array A 2-dimensional array that represents the left nullspace of the stoichiometric matrix which is the nullspace of the transpose of the stoichiometric matrix. metabolites : iterable The metabolites in the nullspace. The length of this vector must equal the first dimension of the nullspace. Model : optlang.Model Model class for a specific optlang interface. Variable : optlang.Variable Variable class for a specific optlang interface. Constraint : optlang.Constraint Constraint class for a specific optlang interface. Objective : optlang.Objective Objective class for a specific optlang interface. References ---------- .. [1] Gevorgyan, A., M. G Poolman, and D. A Fell. "Detection of Stoichiometric Inconsistencies in Biomolecular Models." Bioinformatics 24, no. 19 (2008): 2245. """ assert len(metabolites) == kernel.shape[0],\ "metabolite vector and first nullspace dimension must be equal" ns_problem = Model() k_vars = list() for met in metabolites: # The element y[i] of the mass vector. y_var = Variable(met.id) k_var = Variable("k_{}".format(met.id), type="binary") k_vars.append(k_var) ns_problem.add([y_var, k_var]) # This constraint is equivalent to 0 <= y[i] <= k[i]. ns_problem.add(Constraint( y_var - k_var, ub=0, name="switch_{}".format(met.id))) ns_problem.update() # add nullspace constraints for (j, column) in enumerate(kernel.T): expression = sympy.Add( *[coef * ns_problem.variables[met.id] for (met, coef) in zip(metabolites, column) if coef != 0.0]) constraint = Constraint(expression, lb=0, ub=0, name="ns_{}".format(j)) ns_problem.add(constraint) # The objective is to minimize the binary indicators k[i], subject to # the above inequality constraints. ns_problem.objective = Objective(1) ns_problem.objective.set_linear_coefficients( {k_var: 1. for k_var in k_vars}) ns_problem.objective.direction = "min" return ns_problem, k_vars
[ "def", "create_milp_problem", "(", "kernel", ",", "metabolites", ",", "Model", ",", "Variable", ",", "Constraint", ",", "Objective", ")", ":", "assert", "len", "(", "metabolites", ")", "==", "kernel", ".", "shape", "[", "0", "]", ",", "\"metabolite vector and first nullspace dimension must be equal\"", "ns_problem", "=", "Model", "(", ")", "k_vars", "=", "list", "(", ")", "for", "met", "in", "metabolites", ":", "# The element y[i] of the mass vector.", "y_var", "=", "Variable", "(", "met", ".", "id", ")", "k_var", "=", "Variable", "(", "\"k_{}\"", ".", "format", "(", "met", ".", "id", ")", ",", "type", "=", "\"binary\"", ")", "k_vars", ".", "append", "(", "k_var", ")", "ns_problem", ".", "add", "(", "[", "y_var", ",", "k_var", "]", ")", "# This constraint is equivalent to 0 <= y[i] <= k[i].", "ns_problem", ".", "add", "(", "Constraint", "(", "y_var", "-", "k_var", ",", "ub", "=", "0", ",", "name", "=", "\"switch_{}\"", ".", "format", "(", "met", ".", "id", ")", ")", ")", "ns_problem", ".", "update", "(", ")", "# add nullspace constraints", "for", "(", "j", ",", "column", ")", "in", "enumerate", "(", "kernel", ".", "T", ")", ":", "expression", "=", "sympy", ".", "Add", "(", "*", "[", "coef", "*", "ns_problem", ".", "variables", "[", "met", ".", "id", "]", "for", "(", "met", ",", "coef", ")", "in", "zip", "(", "metabolites", ",", "column", ")", "if", "coef", "!=", "0.0", "]", ")", "constraint", "=", "Constraint", "(", "expression", ",", "lb", "=", "0", ",", "ub", "=", "0", ",", "name", "=", "\"ns_{}\"", ".", "format", "(", "j", ")", ")", "ns_problem", ".", "add", "(", "constraint", ")", "# The objective is to minimize the binary indicators k[i], subject to", "# the above inequality constraints.", "ns_problem", ".", "objective", "=", "Objective", "(", "1", ")", "ns_problem", ".", "objective", ".", "set_linear_coefficients", "(", "{", "k_var", ":", "1.", "for", "k_var", "in", "k_vars", "}", ")", "ns_problem", ".", "objective", ".", "direction", "=", "\"min\"", "return", "ns_problem", ",", "k_vars" ]
Create the MILP as defined by equation (13) in [1]_. Parameters ---------- kernel : numpy.array A 2-dimensional array that represents the left nullspace of the stoichiometric matrix which is the nullspace of the transpose of the stoichiometric matrix. metabolites : iterable The metabolites in the nullspace. The length of this vector must equal the first dimension of the nullspace. Model : optlang.Model Model class for a specific optlang interface. Variable : optlang.Variable Variable class for a specific optlang interface. Constraint : optlang.Constraint Constraint class for a specific optlang interface. Objective : optlang.Objective Objective class for a specific optlang interface. References ---------- .. [1] Gevorgyan, A., M. G Poolman, and D. A Fell. "Detection of Stoichiometric Inconsistencies in Biomolecular Models." Bioinformatics 24, no. 19 (2008): 2245.
[ "Create", "the", "MILP", "as", "defined", "by", "equation", "(", "13", ")", "in", "[", "1", "]", "_", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/consistency_helpers.py#L236-L295
train
Creates the MILP problem for a set of metabolites.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(111) + chr(254 - 203) + chr(1382 - 1333) + chr(0b101 + 0o60), 7756 - 7748), nzTpIcepk0o8('\x30' + chr(0b11101 + 0o122) + '\061' + chr(0b11110 + 0o25) + chr(0b110000 + 0o7), 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(49) + chr(0b110111) + chr(0b11001 + 0o32), 0b1000), nzTpIcepk0o8('\060' + chr(0b11010 + 0o125) + '\x33' + chr(48) + chr(1872 - 1821), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\064' + chr(388 - 335), 0b1000), nzTpIcepk0o8(chr(0b11 + 0o55) + chr(111) + chr(875 - 822) + chr(847 - 795), 0o10), nzTpIcepk0o8(chr(48) + chr(4786 - 4675) + '\061' + '\x35' + chr(48), 51795 - 51787), nzTpIcepk0o8(chr(1801 - 1753) + chr(6380 - 6269) + chr(901 - 850) + chr(0b110100) + '\061', 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(49) + '\x30' + chr(0b110100), 4726 - 4718), nzTpIcepk0o8('\x30' + '\157' + chr(2444 - 2394) + chr(0b10101 + 0o33) + chr(50), 0b1000), nzTpIcepk0o8('\060' + chr(2328 - 2217) + chr(0b110001) + chr(0b10100 + 0o42), 0o10), nzTpIcepk0o8(chr(2053 - 2005) + chr(5318 - 5207) + chr(50) + '\066' + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(0b1000 + 0o50) + chr(3417 - 3306) + chr(2441 - 2390) + chr(0b110100) + chr(50), 40499 - 40491), nzTpIcepk0o8('\060' + chr(0b111101 + 0o62) + chr(51) + chr(0b11100 + 0o24) + chr(0b110011), 8), nzTpIcepk0o8(chr(48) + chr(111) + '\x31' + chr(0b110000 + 0o1) + chr(0b10001 + 0o43), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(49) + chr(0b110110) + chr(2746 - 2691), 0o10), nzTpIcepk0o8('\060' + '\157' + '\062' + chr(2639 - 2585) + chr(0b101100 + 0o12), 0b1000), nzTpIcepk0o8('\x30' + chr(5283 - 5172) + '\063' + chr(0b1010 + 0o51) + chr(360 - 312), ord("\x08")), nzTpIcepk0o8(chr(0b10101 + 0o33) + '\157' + chr(0b1110 + 0o44) + chr(52) + chr(50), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x32' + chr(2065 - 2015) + chr(369 - 315), 58397 - 58389), nzTpIcepk0o8('\060' + '\x6f' + chr(49) + '\x33' + chr(0b110101), 55783 - 55775), nzTpIcepk0o8(chr(0b101000 + 0o10) + '\157' + chr(49) + chr(0b110100) + chr(1625 - 1574), ord("\x08")), nzTpIcepk0o8(chr(2084 - 2036) + chr(0b10110 + 0o131) + chr(51) + '\x35' + chr(54), 16460 - 16452), nzTpIcepk0o8(chr(733 - 685) + chr(111) + chr(965 - 915) + chr(0b1111 + 0o41) + chr(0b101011 + 0o7), 8), nzTpIcepk0o8(chr(48) + '\x6f' + '\x31' + '\x35' + chr(2073 - 2024), ord("\x08")), nzTpIcepk0o8(chr(983 - 935) + chr(111) + chr(50) + chr(52) + chr(0b110000), ord("\x08")), nzTpIcepk0o8(chr(0b10011 + 0o35) + chr(0b10 + 0o155) + chr(0b11110 + 0o23) + '\063' + chr(51), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1000001 + 0o56) + '\063' + '\062' + '\x35', 38735 - 38727), nzTpIcepk0o8('\060' + '\157' + chr(0b110010) + chr(0b100001 + 0o20) + '\x32', 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(51) + chr(0b10101 + 0o42) + chr(1462 - 1410), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(2545 - 2494) + '\065' + '\067', ord("\x08")), nzTpIcepk0o8(chr(0b1010 + 0o46) + chr(9996 - 9885) + '\x32' + '\066' + '\061', 0b1000), nzTpIcepk0o8(chr(0b10101 + 0o33) + chr(0b101001 + 0o106) + chr(55), 0o10), nzTpIcepk0o8(chr(2068 - 2020) + '\x6f' + '\x36' + chr(49), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(50) + '\x37', 6904 - 6896), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(1746 - 1695), ord("\x08")), nzTpIcepk0o8('\060' + chr(125 - 14) + chr(498 - 448) + '\065', 0b1000), nzTpIcepk0o8('\x30' + chr(3943 - 3832) + chr(0b101010 + 0o11) + chr(53) + chr(2331 - 2281), 65161 - 65153), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110001) + '\062', 0b1000), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(111) + '\062' + chr(221 - 168) + '\x37', ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + '\157' + chr(53) + chr(133 - 85), ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xe3'), '\x64' + '\x65' + chr(0b1001001 + 0o32) + chr(0b1101111) + '\x64' + '\145')(chr(0b1110101) + chr(116) + '\146' + chr(273 - 228) + chr(0b1001 + 0o57)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def V3jv2fGX0mxS(xjcI3EsIvP59, nEF0RXSdESqB, BnMvvTxZWjLP, rcOoNATayJEz, C6fmyaLR03e_, HgtjFKMp5kue): assert ftfygxgFas5X(nEF0RXSdESqB) == roI3spqORKae(xjcI3EsIvP59, roI3spqORKae(ES5oEprVxulp(b'\xa17\x19\x8e\x15\x15Z\xa0\x02\xd56\xd5'), '\x64' + chr(0b1001001 + 0o34) + chr(6982 - 6883) + chr(0b1101111) + '\x64' + '\x65')(chr(117) + chr(0b1 + 0o163) + chr(0b11110 + 0o110) + chr(1243 - 1198) + '\x38'))[nzTpIcepk0o8('\060' + chr(0b110001 + 0o76) + '\x30', 0o10)], roI3spqORKae(ES5oEprVxulp(b'\xa0:\x0f\xa2GC\x04\x880\xe7.\xc5\x87\xa08\x18\xc4\xf8\xc3\xf89C\x88\xeb\x1b\xd3/\xf5\xe4\x89\x83\xddtAv`p\xcan\xc6\xa0:\x15\xb0LC\x06\xc1)\xf7}\xc7\xc2\xa1)W\xd3\xa9\xd7\xf71'), '\144' + '\x65' + '\143' + chr(3632 - 3521) + chr(0b1100100) + chr(101))(chr(4158 - 4041) + chr(0b1010110 + 0o36) + chr(5947 - 5845) + chr(0b1001 + 0o44) + '\x38') srQPMT6kEUxo = BnMvvTxZWjLP() ah8nS3DVVHws = H4NoA26ON7iG() for dYApxmRvGyhb in nEF0RXSdESqB: lAlygGJWgO2S = rcOoNATayJEz(dYApxmRvGyhb.maLnLg8O5zPT) ZvXZ39rtS0nl = rcOoNATayJEz(roI3spqORKae(ES5oEprVxulp(b'\xa6\x00\x00\xbe'), '\144' + '\145' + '\143' + chr(0b111111 + 0o60) + chr(0b1000101 + 0o37) + chr(4137 - 4036))(chr(117) + chr(0b111100 + 0o70) + chr(0b10001 + 0o125) + chr(1253 - 1208) + chr(0b111000)).q33KG3foQ_CJ(dYApxmRvGyhb.maLnLg8O5zPT), type=roI3spqORKae(ES5oEprVxulp(b'\xaf6\x15\xa2WU'), chr(9465 - 9365) + '\145' + chr(0b10110 + 0o115) + '\x6f' + chr(0b1110 + 0o126) + chr(6946 - 6845))('\165' + chr(0b1001010 + 0o52) + '\146' + chr(45) + chr(0b111000))) roI3spqORKae(ah8nS3DVVHws, roI3spqORKae(ES5oEprVxulp(b'\x85\x0b(\xf7]K/\x8e.\xed[\x86'), '\144' + '\145' + chr(99) + chr(111) + '\144' + chr(0b11100 + 0o111))(chr(117) + '\x74' + '\x66' + chr(45) + '\070'))(ZvXZ39rtS0nl) roI3spqORKae(srQPMT6kEUxo, roI3spqORKae(ES5oEprVxulp(b'\xb8l*\xa7L_!\x90\x00\xe4M\xd7'), chr(0b1100100) + chr(0b10101 + 0o120) + '\143' + chr(0b1101111) + chr(0b1100000 + 0o4) + '\145')('\x75' + chr(116) + chr(0b1100110) + chr(0b101101) + '\x38'))([lAlygGJWgO2S, ZvXZ39rtS0nl]) roI3spqORKae(srQPMT6kEUxo, roI3spqORKae(ES5oEprVxulp(b'\xb8l*\xa7L_!\x90\x00\xe4M\xd7'), chr(100) + '\145' + '\x63' + '\x6f' + chr(1818 - 1718) + chr(0b1100101))('\x75' + chr(7949 - 7833) + chr(0b1100110) + chr(1710 - 1665) + chr(0b111000)))(C6fmyaLR03e_(lAlygGJWgO2S - ZvXZ39rtS0nl, ub=nzTpIcepk0o8('\060' + '\x6f' + chr(48), 8), name=roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'\xbe(\x12\xb7FD7\x9a9'), chr(0b1100100) + chr(0b1100101) + chr(0b1100011) + chr(0b100010 + 0o115) + '\144' + '\145')(chr(3646 - 3529) + '\x74' + '\146' + '\055' + chr(56)), roI3spqORKae(ES5oEprVxulp(b'\xbclH\x88b\x1f\x0e\x8e\x15\xddM\xf9'), chr(0b111101 + 0o47) + '\145' + chr(99) + chr(8724 - 8613) + chr(0b1011010 + 0o12) + chr(9502 - 9401))(chr(7366 - 7249) + '\164' + '\146' + chr(0b101101) + chr(0b11001 + 0o37)))(roI3spqORKae(dYApxmRvGyhb, roI3spqORKae(ES5oEprVxulp(b'\xa0>7\xadiKP\xaeq\xf8^\xe7'), chr(7005 - 6905) + '\x65' + chr(99) + chr(0b1011111 + 0o20) + chr(0b1100100) + chr(0b100011 + 0o102))('\x75' + chr(116) + '\x66' + chr(465 - 420) + chr(1411 - 1355)))))) roI3spqORKae(srQPMT6kEUxo, roI3spqORKae(ES5oEprVxulp(b"\x87\x00\x10\xf1lu*\xd0'\xe7\x7f\xdd"), chr(0b1100100) + chr(101) + chr(0b101111 + 0o64) + chr(0b1101111) + chr(0b1100100) + '\145')('\x75' + chr(0b1010 + 0o152) + '\x66' + chr(0b101101) + chr(0b11111 + 0o31)))() for (sChW4gUsXrIC, KBggEttLg7_8) in _kV_Bomx8PZ4(roI3spqORKae(xjcI3EsIvP59, roI3spqORKae(ES5oEprVxulp(b'\xa5.M\x9b`\x187\xaf,\xe68\xe1'), chr(100) + chr(101) + '\143' + '\157' + chr(0b1100100) + chr(101))('\165' + chr(0b100101 + 0o117) + chr(0b1100110) + chr(0b1 + 0o54) + chr(56)))): Jni_E12Y8D3Y = Ek37Ilp_fkrO.Add(*[twRKeb6oMfIh * srQPMT6kEUxo.LuMTuvwD9t2e[dYApxmRvGyhb.maLnLg8O5zPT] for (dYApxmRvGyhb, twRKeb6oMfIh) in TxMFWa_Xzviv(nEF0RXSdESqB, KBggEttLg7_8) if twRKeb6oMfIh != 0.0]) ohEuJ8IkzWqq = C6fmyaLR03e_(Jni_E12Y8D3Y, lb=nzTpIcepk0o8(chr(1555 - 1507) + '\x6f' + chr(0b10101 + 0o33), 8), ub=nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b11000 + 0o30), 8), name=roI3spqORKae(ES5oEprVxulp(b'\xa3,$\xb8X'), chr(6277 - 6177) + chr(101) + chr(2469 - 2370) + chr(0b1101111) + '\x64' + chr(101))(chr(117) + chr(12669 - 12553) + chr(102) + chr(0b101101) + chr(0b111000)).q33KG3foQ_CJ(sChW4gUsXrIC)) roI3spqORKae(srQPMT6kEUxo, roI3spqORKae(ES5oEprVxulp(b'\xb8l*\xa7L_!\x90\x00\xe4M\xd7'), '\x64' + chr(101) + chr(99) + chr(0b1000111 + 0o50) + chr(0b1100100) + chr(8776 - 8675))(chr(0b1110101) + chr(0b1110100) + chr(102) + chr(45) + chr(0b110010 + 0o6)))(ohEuJ8IkzWqq) srQPMT6kEUxo.iaL5zRIdtdSO = HgtjFKMp5kue(nzTpIcepk0o8(chr(48) + chr(4787 - 4676) + chr(49), ord("\x08"))) roI3spqORKae(srQPMT6kEUxo.objective, roI3spqORKae(ES5oEprVxulp(b'\xbe:\x0f\x9cIE\x06\x84%\xf0Q\xd0\x8d\xa6*\x11\xdf\xbb\xcb\xf33\x17\x9d'), chr(0b1100100) + chr(4781 - 4680) + chr(99) + chr(0b1101111) + chr(7503 - 7403) + chr(101))(chr(117) + chr(0b1100110 + 0o16) + chr(102) + chr(0b101101 + 0o0) + chr(0b111000)))({ZvXZ39rtS0nl: 1.0 for ZvXZ39rtS0nl in ah8nS3DVVHws}) srQPMT6kEUxo.objective.rWMsESlLhmTs = roI3spqORKae(ES5oEprVxulp(b'\xa06\x15'), chr(100) + '\145' + chr(0b1000010 + 0o41) + chr(0b1101111) + '\x64' + chr(101))(chr(0b1000100 + 0o61) + chr(0b1110100) + chr(0b1100110) + '\055' + chr(2520 - 2464)) return (srQPMT6kEUxo, ah8nS3DVVHws)
opencobra/memote
memote/support/consistency_helpers.py
add_cut
def add_cut(problem, indicators, bound, Constraint): """ Add an integer cut to the problem. Ensure that the same solution involving these indicator variables cannot be found by enforcing their sum to be less than before. Parameters ---------- problem : optlang.Model Specific optlang interface Model instance. indicators : iterable Binary indicator `optlang.Variable`s. bound : int Should be one less than the sum of indicators. Corresponds to P - 1 in equation (14) in [1]_. Constraint : optlang.Constraint Constraint class for a specific optlang interface. References ---------- .. [1] Gevorgyan, A., M. G Poolman, and D. A Fell. "Detection of Stoichiometric Inconsistencies in Biomolecular Models." Bioinformatics 24, no. 19 (2008): 2245. """ cut = Constraint(sympy.Add(*indicators), ub=bound) problem.add(cut) return cut
python
def add_cut(problem, indicators, bound, Constraint): """ Add an integer cut to the problem. Ensure that the same solution involving these indicator variables cannot be found by enforcing their sum to be less than before. Parameters ---------- problem : optlang.Model Specific optlang interface Model instance. indicators : iterable Binary indicator `optlang.Variable`s. bound : int Should be one less than the sum of indicators. Corresponds to P - 1 in equation (14) in [1]_. Constraint : optlang.Constraint Constraint class for a specific optlang interface. References ---------- .. [1] Gevorgyan, A., M. G Poolman, and D. A Fell. "Detection of Stoichiometric Inconsistencies in Biomolecular Models." Bioinformatics 24, no. 19 (2008): 2245. """ cut = Constraint(sympy.Add(*indicators), ub=bound) problem.add(cut) return cut
[ "def", "add_cut", "(", "problem", ",", "indicators", ",", "bound", ",", "Constraint", ")", ":", "cut", "=", "Constraint", "(", "sympy", ".", "Add", "(", "*", "indicators", ")", ",", "ub", "=", "bound", ")", "problem", ".", "add", "(", "cut", ")", "return", "cut" ]
Add an integer cut to the problem. Ensure that the same solution involving these indicator variables cannot be found by enforcing their sum to be less than before. Parameters ---------- problem : optlang.Model Specific optlang interface Model instance. indicators : iterable Binary indicator `optlang.Variable`s. bound : int Should be one less than the sum of indicators. Corresponds to P - 1 in equation (14) in [1]_. Constraint : optlang.Constraint Constraint class for a specific optlang interface. References ---------- .. [1] Gevorgyan, A., M. G Poolman, and D. A Fell. "Detection of Stoichiometric Inconsistencies in Biomolecular Models." Bioinformatics 24, no. 19 (2008): 2245.
[ "Add", "an", "integer", "cut", "to", "the", "problem", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/consistency_helpers.py#L298-L327
train
Adds an integer cut to the problem.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(0b10010 + 0o135) + chr(50) + chr(48), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1000100 + 0o53) + chr(0b110010) + '\x34' + chr(52), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b1 + 0o60) + chr(0b110100) + chr(50), 7456 - 7448), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110010) + chr(2638 - 2586) + '\x30', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(51) + '\066' + '\x33', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(51) + chr(0b101000 + 0o14) + '\x32', 0b1000), nzTpIcepk0o8('\060' + chr(0b110000 + 0o77) + '\061' + chr(0b110011) + chr(0b11110 + 0o25), 0o10), nzTpIcepk0o8(chr(1706 - 1658) + chr(0b1101111) + chr(0b110011) + chr(0b110010) + chr(0b10000 + 0o46), 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\x33' + chr(0b110111) + chr(0b10110 + 0o35), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b100011 + 0o17) + chr(51) + chr(48), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110101) + '\067', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b100100 + 0o17) + '\067' + chr(0b110101), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(51) + chr(0b1001 + 0o55) + chr(0b110111), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b10101 + 0o132) + '\x32' + '\067' + chr(1141 - 1092), 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\x31' + chr(51) + '\x37', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\x32' + '\x36', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110011) + chr(0b110001) + '\060', 0b1000), nzTpIcepk0o8(chr(1683 - 1635) + '\157' + '\062' + chr(0b100101 + 0o15) + '\066', ord("\x08")), nzTpIcepk0o8(chr(1365 - 1317) + '\x6f' + chr(51) + '\x31' + chr(0b1010 + 0o54), 0b1000), nzTpIcepk0o8(chr(0b1011 + 0o45) + '\x6f' + chr(0b110001) + chr(0b1 + 0o61) + chr(0b100111 + 0o20), 30317 - 30309), nzTpIcepk0o8('\060' + chr(0b100000 + 0o117) + chr(0b101111 + 0o2) + chr(991 - 942) + '\062', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b10101 + 0o132) + chr(0b11001 + 0o31) + '\x32' + '\064', ord("\x08")), nzTpIcepk0o8(chr(0b10101 + 0o33) + chr(0b1001011 + 0o44) + chr(0b110010) + chr(0b110100) + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x33' + chr(55), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b110001) + chr(1863 - 1812) + chr(55), 8), nzTpIcepk0o8('\x30' + chr(0b1001001 + 0o46) + chr(0b110001) + chr(51) + chr(52), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(49) + '\062' + chr(0b110000 + 0o6), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110101) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x31' + chr(49), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001 + 0o1) + chr(0b100101 + 0o20) + chr(0b101111 + 0o4), 0o10), nzTpIcepk0o8(chr(48) + chr(4016 - 3905) + '\x31' + chr(165 - 114) + chr(0b11110 + 0o31), 8), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\062' + chr(0b110111) + chr(0b110010), 40006 - 39998), nzTpIcepk0o8('\060' + chr(5441 - 5330) + chr(51) + '\x35' + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(2178 - 2129) + chr(54) + chr(0b11011 + 0o25), 0b1000), nzTpIcepk0o8(chr(0b1111 + 0o41) + '\x6f' + chr(49) + chr(0b110000) + chr(1954 - 1902), 30091 - 30083), nzTpIcepk0o8(chr(1459 - 1411) + '\157' + chr(0b110010) + '\062' + chr(54), 8), nzTpIcepk0o8('\x30' + '\x6f' + '\x32' + '\x32' + chr(1977 - 1927), 0o10), nzTpIcepk0o8('\060' + chr(4121 - 4010) + chr(1733 - 1683) + chr(0b1101 + 0o47) + chr(1194 - 1144), 0o10), nzTpIcepk0o8('\060' + '\157' + chr(0b110111) + chr(391 - 342), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(0b11111 + 0o24) + chr(0b10011 + 0o42) + chr(152 - 99), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b11111 + 0o21) + '\157' + chr(0b1000 + 0o55) + chr(0b110000), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'>'), chr(1213 - 1113) + chr(101) + '\x63' + chr(0b1101111) + chr(100) + chr(0b0 + 0o145))(chr(0b1110101) + '\164' + chr(1849 - 1747) + chr(698 - 653) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def FlyviRrTs7B8(WRwo4PIDrmHM, NgQ7TDk6roNl, qR1Yu6tJYVhg, C6fmyaLR03e_): cm_ZA3JJLKFl = C6fmyaLR03e_(Ek37Ilp_fkrO.Add(*NgQ7TDk6roNl), ub=qR1Yu6tJYVhg) roI3spqORKae(WRwo4PIDrmHM, roI3spqORKae(ES5oEprVxulp(b'e\x973\xc4\x9a\x91\x12\xa7\xbf\xfel\x99'), chr(100) + chr(0b100 + 0o141) + chr(8201 - 8102) + chr(795 - 684) + '\144' + '\x65')(chr(7038 - 6921) + '\x74' + '\146' + chr(0b1001 + 0o44) + chr(56)))(cm_ZA3JJLKFl) return cm_ZA3JJLKFl
opencobra/memote
memote/support/consistency_helpers.py
is_mass_balanced
def is_mass_balanced(reaction): """Confirm that a reaction is mass balanced.""" balance = defaultdict(int) for metabolite, coefficient in iteritems(reaction.metabolites): if metabolite.elements is None or len(metabolite.elements) == 0: return False for element, amount in iteritems(metabolite.elements): balance[element] += coefficient * amount return all(amount == 0 for amount in itervalues(balance))
python
def is_mass_balanced(reaction): """Confirm that a reaction is mass balanced.""" balance = defaultdict(int) for metabolite, coefficient in iteritems(reaction.metabolites): if metabolite.elements is None or len(metabolite.elements) == 0: return False for element, amount in iteritems(metabolite.elements): balance[element] += coefficient * amount return all(amount == 0 for amount in itervalues(balance))
[ "def", "is_mass_balanced", "(", "reaction", ")", ":", "balance", "=", "defaultdict", "(", "int", ")", "for", "metabolite", ",", "coefficient", "in", "iteritems", "(", "reaction", ".", "metabolites", ")", ":", "if", "metabolite", ".", "elements", "is", "None", "or", "len", "(", "metabolite", ".", "elements", ")", "==", "0", ":", "return", "False", "for", "element", ",", "amount", "in", "iteritems", "(", "metabolite", ".", "elements", ")", ":", "balance", "[", "element", "]", "+=", "coefficient", "*", "amount", "return", "all", "(", "amount", "==", "0", "for", "amount", "in", "itervalues", "(", "balance", ")", ")" ]
Confirm that a reaction is mass balanced.
[ "Confirm", "that", "a", "reaction", "is", "mass", "balanced", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/consistency_helpers.py#L330-L338
train
Confirm that a reaction is mass balanced.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(0b1100010 + 0o15) + chr(0b101 + 0o56) + chr(0b11010 + 0o35) + chr(0b1 + 0o64), 29897 - 29889), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110011) + chr(0b110111) + chr(0b1000 + 0o54), 4859 - 4851), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(2319 - 2268) + chr(48) + '\065', 0b1000), nzTpIcepk0o8(chr(404 - 356) + chr(0b1101111) + chr(0b11001 + 0o33) + '\064', 37439 - 37431), nzTpIcepk0o8(chr(0b110000) + chr(0b10 + 0o155) + chr(55) + chr(0b111 + 0o54), 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\x32' + '\x30' + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(0b11111 + 0o21) + '\157' + '\x36' + '\065', 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b100101 + 0o15) + chr(53) + chr(50), 0b1000), nzTpIcepk0o8(chr(0b100010 + 0o16) + chr(0b1011010 + 0o25) + '\x34' + '\x32', 36074 - 36066), nzTpIcepk0o8(chr(0b110000) + '\157' + '\062' + chr(994 - 941) + chr(0b1010 + 0o50), 8), nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(1874 - 1763) + '\x35' + chr(156 - 105), 41156 - 41148), nzTpIcepk0o8(chr(2179 - 2131) + chr(0b1101111) + chr(0b101001 + 0o10) + chr(50) + '\060', 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(0b10110 + 0o33) + chr(1445 - 1397) + chr(51), 0b1000), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(0b1010 + 0o145) + chr(0b100000 + 0o23) + chr(0b101 + 0o61), 50116 - 50108), nzTpIcepk0o8('\x30' + chr(111) + chr(0b100111 + 0o15) + chr(0b110000), 0o10), nzTpIcepk0o8(chr(1851 - 1803) + chr(0b101110 + 0o101) + chr(0b110011) + chr(51) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(7872 - 7761) + '\061' + '\065' + chr(439 - 387), 33105 - 33097), nzTpIcepk0o8(chr(1401 - 1353) + '\157' + chr(0b110010) + chr(0b110101), ord("\x08")), nzTpIcepk0o8('\060' + chr(7037 - 6926) + chr(0b110001) + '\064', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b1010 + 0o55) + chr(0b10 + 0o56), 0o10), nzTpIcepk0o8(chr(0b11010 + 0o26) + chr(9138 - 9027) + '\065' + chr(0b110110), 0b1000), nzTpIcepk0o8(chr(498 - 450) + chr(9095 - 8984) + '\x32' + chr(0b111 + 0o55) + chr(0b100111 + 0o11), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(50) + chr(741 - 688) + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(49) + '\061' + chr(0b110000), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110111) + chr(53), 0b1000), nzTpIcepk0o8(chr(371 - 323) + chr(9187 - 9076) + chr(0b110001) + chr(0b110010) + chr(0b10111 + 0o33), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + '\x32' + chr(48) + '\062', 0b1000), nzTpIcepk0o8(chr(1496 - 1448) + '\x6f' + chr(2206 - 2156) + chr(0b1100 + 0o52) + chr(0b110011), 53226 - 53218), nzTpIcepk0o8(chr(48) + chr(11894 - 11783) + '\x33' + chr(0b110101 + 0o1), 8), nzTpIcepk0o8(chr(911 - 863) + chr(111) + chr(49), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110001 + 0o6) + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(0b10001 + 0o37) + '\157' + chr(50) + '\x31' + chr(0b100001 + 0o20), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\062' + chr(0b110111 + 0o0) + '\x37', 58567 - 58559), nzTpIcepk0o8(chr(0b110000) + chr(8953 - 8842) + chr(51) + chr(0b110001 + 0o0) + chr(55), 6975 - 6967), nzTpIcepk0o8(chr(403 - 355) + chr(0b1101111) + chr(0b110010) + '\x32' + chr(1400 - 1350), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(51) + chr(0b110111) + chr(49), 0b1000), nzTpIcepk0o8('\060' + chr(0b111011 + 0o64) + '\x32' + '\064' + chr(48), 8), nzTpIcepk0o8('\x30' + chr(111) + chr(541 - 490) + chr(1570 - 1520), 22910 - 22902), nzTpIcepk0o8(chr(1749 - 1701) + chr(4623 - 4512) + chr(50) + '\x31' + chr(48), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(55) + '\x31', 8)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + '\157' + chr(2602 - 2549) + '\060', 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xd3'), chr(8985 - 8885) + '\x65' + chr(0b1100011) + chr(0b10101 + 0o132) + '\144' + chr(0b1100101))(chr(715 - 598) + '\164' + chr(8890 - 8788) + chr(0b101011 + 0o2) + chr(0b110111 + 0o1)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def PvUsnB3fomp2(gmOzD_aWO9K9): sm007f_5YZh9 = mM1QxhFYKsbc(nzTpIcepk0o8) for (anF9jPBJvgcl, qQN84MS_pf7g) in tcSkjcrLksk1(roI3spqORKae(gmOzD_aWO9K9, roI3spqORKae(ES5oEprVxulp(b'\x90\x99\xb1EY\xebY\xc3V\xcfX'), chr(0b1100100) + '\145' + chr(0b1100011) + '\157' + chr(4035 - 3935) + chr(0b1100101))('\165' + '\164' + chr(0b1100110) + '\055' + chr(56)))): if roI3spqORKae(anF9jPBJvgcl, roI3spqORKae(ES5oEprVxulp(b'\x98\x90\xa0I^\xeaA\xd9'), chr(100) + chr(0b11010 + 0o113) + '\x63' + chr(0b1100100 + 0o13) + '\x64' + chr(0b1100101))(chr(0b1110101) + '\164' + chr(0b1100110) + '\x2d' + chr(56))) is None or ftfygxgFas5X(roI3spqORKae(anF9jPBJvgcl, roI3spqORKae(ES5oEprVxulp(b'\x98\x90\xa0I^\xeaA\xd9'), chr(100) + chr(0b1100101) + chr(4210 - 4111) + chr(111) + chr(100) + '\145')('\x75' + chr(9373 - 9257) + '\146' + chr(64 - 19) + chr(2272 - 2216)))) == nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(403 - 355), 0o10): return nzTpIcepk0o8('\060' + '\157' + chr(0b110000), 8) for (pXRQUD7VR93J, WwJhdr7TpaLo) in tcSkjcrLksk1(roI3spqORKae(anF9jPBJvgcl, roI3spqORKae(ES5oEprVxulp(b'\x98\x90\xa0I^\xeaA\xd9'), chr(5499 - 5399) + chr(1340 - 1239) + '\x63' + chr(0b1101111) + '\144' + chr(0b1100101))('\165' + '\x74' + chr(102) + chr(0b101101) + chr(0b10000 + 0o50)))): sm007f_5YZh9[pXRQUD7VR93J] += qQN84MS_pf7g * WwJhdr7TpaLo return qX60lO1lgHA5((WwJhdr7TpaLo == nzTpIcepk0o8(chr(48) + '\x6f' + chr(1537 - 1489), 8) for WwJhdr7TpaLo in xOeDItteThRJ(sm007f_5YZh9)))
opencobra/memote
memote/support/consistency_helpers.py
is_charge_balanced
def is_charge_balanced(reaction): """Confirm that a reaction is charge balanced.""" charge = 0 for metabolite, coefficient in iteritems(reaction.metabolites): if metabolite.charge is None: return False charge += coefficient * metabolite.charge return charge == 0
python
def is_charge_balanced(reaction): """Confirm that a reaction is charge balanced.""" charge = 0 for metabolite, coefficient in iteritems(reaction.metabolites): if metabolite.charge is None: return False charge += coefficient * metabolite.charge return charge == 0
[ "def", "is_charge_balanced", "(", "reaction", ")", ":", "charge", "=", "0", "for", "metabolite", ",", "coefficient", "in", "iteritems", "(", "reaction", ".", "metabolites", ")", ":", "if", "metabolite", ".", "charge", "is", "None", ":", "return", "False", "charge", "+=", "coefficient", "*", "metabolite", ".", "charge", "return", "charge", "==", "0" ]
Confirm that a reaction is charge balanced.
[ "Confirm", "that", "a", "reaction", "is", "charge", "balanced", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/consistency_helpers.py#L341-L348
train
Confirm that a reaction is charge balanced.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b100001 + 0o17) + '\x6f' + '\061' + '\x31' + chr(0b110000 + 0o6), 0o10), nzTpIcepk0o8(chr(48) + chr(0b10011 + 0o134) + chr(1750 - 1697) + '\062', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(8256 - 8145) + '\x37' + '\x34', 0b1000), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(0b1100101 + 0o12) + '\062' + '\060' + '\067', 0o10), nzTpIcepk0o8('\x30' + chr(0b1101010 + 0o5) + chr(49) + chr(2295 - 2245) + chr(1523 - 1470), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110010) + chr(1828 - 1779) + chr(2325 - 2274), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + '\062' + chr(1631 - 1582) + chr(0b110010), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b1101 + 0o46) + chr(523 - 474), 0b1000), nzTpIcepk0o8(chr(0b10 + 0o56) + '\157' + chr(49) + '\067' + '\066', 33985 - 33977), nzTpIcepk0o8(chr(48) + '\157' + chr(0b11001 + 0o30) + chr(0b110000) + '\x35', 7616 - 7608), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(111) + chr(1934 - 1884) + '\061' + chr(0b110001 + 0o2), 8), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\064', 0o10), nzTpIcepk0o8(chr(48) + chr(3866 - 3755) + '\x31' + '\067' + chr(50), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1389 - 1337) + chr(0b110000), 0b1000), nzTpIcepk0o8(chr(1030 - 982) + '\157' + '\061' + '\x32' + '\066', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(49) + chr(0b100000 + 0o21) + chr(0b101100 + 0o7), 58497 - 58489), nzTpIcepk0o8('\060' + '\x6f' + '\x31' + chr(1412 - 1361), ord("\x08")), nzTpIcepk0o8(chr(1374 - 1326) + chr(111) + chr(0b1001 + 0o52) + chr(0b1111 + 0o42) + chr(2256 - 2203), 0b1000), nzTpIcepk0o8('\x30' + chr(0b10000 + 0o137) + chr(381 - 330) + '\067', 20227 - 20219), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(225 - 176) + chr(0b111 + 0o57) + '\x33', 56924 - 56916), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(0b1101111) + chr(1741 - 1692) + chr(53) + '\x36', 20618 - 20610), nzTpIcepk0o8(chr(48) + '\157' + chr(49) + chr(53) + chr(0b110101), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b100101 + 0o16) + '\064' + chr(53), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x31' + chr(0b100110 + 0o20) + chr(1525 - 1476), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001) + chr(0b11110 + 0o23), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x33' + '\063' + '\060', 0o10), nzTpIcepk0o8('\x30' + chr(0b1000110 + 0o51) + '\061', ord("\x08")), nzTpIcepk0o8(chr(0b100000 + 0o20) + chr(0b1101111) + '\x34' + '\067', ord("\x08")), nzTpIcepk0o8(chr(0b11010 + 0o26) + chr(0b1101111) + chr(2091 - 2041) + '\x37' + '\064', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1011 + 0o144) + chr(260 - 210) + chr(0b110011) + chr(1159 - 1111), 0b1000), nzTpIcepk0o8(chr(1032 - 984) + chr(0b10 + 0o155) + chr(0b110 + 0o56) + '\x36', 43378 - 43370), nzTpIcepk0o8(chr(765 - 717) + chr(111) + chr(1154 - 1104) + chr(2041 - 1993) + chr(53), 7491 - 7483), nzTpIcepk0o8(chr(0b100011 + 0o15) + chr(3365 - 3254) + chr(51) + chr(0b110100), 15549 - 15541), nzTpIcepk0o8(chr(0b110000 + 0o0) + '\157' + '\x31' + '\x37' + chr(0b110111), 0o10), nzTpIcepk0o8(chr(48) + chr(4180 - 4069) + '\063' + '\061' + chr(2344 - 2289), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(1010 - 961) + '\064' + chr(0b110010 + 0o3), 3998 - 3990), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b11110 + 0o23) + '\066' + chr(0b110010), 31239 - 31231), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110011) + chr(0b110110) + chr(0b101011 + 0o12), 50866 - 50858), nzTpIcepk0o8('\x30' + '\157' + chr(0b110011) + '\x35' + chr(55), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + '\x32' + chr(0b110000) + chr(2277 - 2224), 8)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + '\157' + chr(2515 - 2462) + '\060', ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'`'), chr(0b10100 + 0o120) + chr(8503 - 8402) + chr(99) + chr(9237 - 9126) + chr(0b1100100) + chr(0b1111 + 0o126))('\x75' + '\164' + chr(2052 - 1950) + '\x2d' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def avgPLbyYtbtv(gmOzD_aWO9K9): u7x6kDAmYnhY = nzTpIcepk0o8(chr(448 - 400) + chr(0b1100 + 0o143) + '\060', 0b1000) for (anF9jPBJvgcl, qQN84MS_pf7g) in tcSkjcrLksk1(roI3spqORKae(gmOzD_aWO9K9, roI3spqORKae(ES5oEprVxulp(b'#OH\xe67\xe4\xe6p\n \xf8'), '\x64' + chr(0b1000000 + 0o45) + chr(6404 - 6305) + '\157' + chr(0b100101 + 0o77) + chr(101))(chr(0b111011 + 0o72) + '\x74' + chr(102) + '\x2d' + chr(2476 - 2420)))): if roI3spqORKae(anF9jPBJvgcl, roI3spqORKae(ES5oEprVxulp(b";\x1dD\xb1>\xcf\xcbt'+\xe3]"), chr(0b100111 + 0o75) + '\x65' + '\x63' + chr(0b1000100 + 0o53) + chr(0b1100100) + chr(101))(chr(117) + chr(0b1110100) + '\146' + chr(505 - 460) + '\x38')) is None: return nzTpIcepk0o8(chr(0b101 + 0o53) + '\x6f' + chr(0b110000), 8) u7x6kDAmYnhY += qQN84MS_pf7g * anF9jPBJvgcl.u7x6kDAmYnhY return u7x6kDAmYnhY == nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(1574 - 1526), 8)
opencobra/memote
memote/experimental/checks.py
check_partial
def check_partial(func, *args, **kwargs): """Create a partial to be used by goodtables.""" new_func = partial(func, *args, **kwargs) new_func.check = func.check return new_func
python
def check_partial(func, *args, **kwargs): """Create a partial to be used by goodtables.""" new_func = partial(func, *args, **kwargs) new_func.check = func.check return new_func
[ "def", "check_partial", "(", "func", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "new_func", "=", "partial", "(", "func", ",", "*", "args", ",", "*", "*", "kwargs", ")", "new_func", ".", "check", "=", "func", ".", "check", "return", "new_func" ]
Create a partial to be used by goodtables.
[ "Create", "a", "partial", "to", "be", "used", "by", "goodtables", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/checks.py#L27-L31
train
Create a partial to be used by goodtables.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(1424 - 1313) + chr(50) + chr(0b10110 + 0o41) + '\063', 58081 - 58073), nzTpIcepk0o8(chr(0b10110 + 0o32) + '\x6f' + '\061' + '\065' + '\064', 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(2394 - 2343) + '\062' + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110010) + chr(51), 15543 - 15535), nzTpIcepk0o8(chr(0b110000 + 0o0) + '\157' + '\061' + chr(0b10111 + 0o36) + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(0b10001 + 0o37) + chr(0b1101111) + chr(833 - 783), 49069 - 49061), nzTpIcepk0o8(chr(522 - 474) + chr(111) + chr(0b110101), ord("\x08")), nzTpIcepk0o8(chr(849 - 801) + chr(111) + '\x33' + '\066' + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110001) + '\x34' + '\x33', 0o10), nzTpIcepk0o8(chr(0b11001 + 0o27) + chr(0b1010 + 0o145) + chr(0b101100 + 0o5) + chr(51) + chr(1773 - 1719), ord("\x08")), nzTpIcepk0o8(chr(0b1101 + 0o43) + '\157' + '\x34', 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(1372 - 1321) + '\x34', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b110111 + 0o70) + '\x33' + chr(0b110100) + chr(1812 - 1763), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(50) + chr(50) + '\066', 0b1000), nzTpIcepk0o8('\060' + chr(111) + '\065' + '\063', 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010), 8), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110011) + chr(51) + chr(50), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\061' + chr(0b110101) + '\065', 8), nzTpIcepk0o8(chr(480 - 432) + chr(0b1000001 + 0o56) + chr(0b101000 + 0o15) + chr(0b110101), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\061' + chr(1441 - 1388) + '\x33', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b10011 + 0o134) + chr(50) + '\065' + chr(0b110010), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b11 + 0o154) + '\x33' + '\066' + chr(427 - 379), 0o10), nzTpIcepk0o8(chr(0b1 + 0o57) + '\x6f' + chr(2190 - 2140) + chr(2469 - 2419) + chr(0b110011), 37807 - 37799), nzTpIcepk0o8('\060' + chr(0b1101111) + '\062' + chr(0b110111) + '\x37', 0b1000), nzTpIcepk0o8(chr(1904 - 1856) + '\x6f' + chr(528 - 477) + chr(2371 - 2317), 61609 - 61601), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(50) + chr(0b100101 + 0o15) + '\x31', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\065' + '\062', 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(49) + chr(524 - 475) + '\x35', 50042 - 50034), nzTpIcepk0o8('\x30' + '\x6f' + '\061' + chr(0b110101) + '\066', 0b1000), nzTpIcepk0o8(chr(618 - 570) + chr(0b1001110 + 0o41) + '\064' + chr(0b101101 + 0o6), 0b1000), nzTpIcepk0o8('\x30' + chr(0b100000 + 0o117) + '\062' + chr(0b110000) + chr(0b1010 + 0o51), 38509 - 38501), nzTpIcepk0o8(chr(0b110000 + 0o0) + chr(111) + chr(0b11111 + 0o24), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(49) + chr(2586 - 2533) + '\064', 8), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b101111 + 0o2) + chr(50) + chr(293 - 244), 51761 - 51753), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110001) + '\064' + chr(0b101010 + 0o12), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b101111 + 0o100) + chr(51) + chr(418 - 364) + chr(886 - 833), 21987 - 21979), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b10000 + 0o41) + '\065' + chr(0b10001 + 0o43), 8), nzTpIcepk0o8(chr(1391 - 1343) + '\x6f' + '\061' + '\065' + chr(1177 - 1128), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b101111 + 0o4) + '\x35' + '\x33', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(108 - 57) + chr(0b110100) + chr(0b1011 + 0o52), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b101010 + 0o13) + chr(48), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x95'), chr(8741 - 8641) + '\145' + chr(0b1100011) + '\x6f' + chr(4897 - 4797) + '\x65')(chr(0b101111 + 0o106) + chr(0b11000 + 0o134) + chr(0b10000 + 0o126) + chr(1887 - 1842) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def V9tQAqFqMJAS(h0klhChk4Vv6, *eemPYp2vtTSr, **q5n0sHDDTy90): Rdy_ChWHksb8 = v_5JLGL_2DSR(h0klhChk4Vv6, *eemPYp2vtTSr, **q5n0sHDDTy90) Rdy_ChWHksb8.TahWqI1KsjrZ = h0klhChk4Vv6.TahWqI1KsjrZ return Rdy_ChWHksb8
opencobra/memote
memote/experimental/checks.py
gene_id_check
def gene_id_check(genes, errors, columns, row_number): """ Validate gene identifiers against a known set. Parameters ---------- genes : set The known set of gene identifiers. errors : Passed by goodtables. columns : Passed by goodtables. row_number : Passed by goodtables. """ message = ("Gene '{value}' in column {col} and row {row} does not " "appear in the metabolic model.") for column in columns: if "gene" in column['header'] and column['value'] not in genes: message = message.format( value=column['value'], row=row_number, col=column['number']) errors.append({ 'code': 'bad-value', 'message': message, 'row-number': row_number, 'column-number': column['number'], })
python
def gene_id_check(genes, errors, columns, row_number): """ Validate gene identifiers against a known set. Parameters ---------- genes : set The known set of gene identifiers. errors : Passed by goodtables. columns : Passed by goodtables. row_number : Passed by goodtables. """ message = ("Gene '{value}' in column {col} and row {row} does not " "appear in the metabolic model.") for column in columns: if "gene" in column['header'] and column['value'] not in genes: message = message.format( value=column['value'], row=row_number, col=column['number']) errors.append({ 'code': 'bad-value', 'message': message, 'row-number': row_number, 'column-number': column['number'], })
[ "def", "gene_id_check", "(", "genes", ",", "errors", ",", "columns", ",", "row_number", ")", ":", "message", "=", "(", "\"Gene '{value}' in column {col} and row {row} does not \"", "\"appear in the metabolic model.\"", ")", "for", "column", "in", "columns", ":", "if", "\"gene\"", "in", "column", "[", "'header'", "]", "and", "column", "[", "'value'", "]", "not", "in", "genes", ":", "message", "=", "message", ".", "format", "(", "value", "=", "column", "[", "'value'", "]", ",", "row", "=", "row_number", ",", "col", "=", "column", "[", "'number'", "]", ")", "errors", ".", "append", "(", "{", "'code'", ":", "'bad-value'", ",", "'message'", ":", "message", ",", "'row-number'", ":", "row_number", ",", "'column-number'", ":", "column", "[", "'number'", "]", ",", "}", ")" ]
Validate gene identifiers against a known set. Parameters ---------- genes : set The known set of gene identifiers. errors : Passed by goodtables. columns : Passed by goodtables. row_number : Passed by goodtables.
[ "Validate", "gene", "identifiers", "against", "a", "known", "set", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/checks.py#L35-L64
train
Validate gene identifiers against a known set.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b101000 + 0o10) + chr(617 - 506) + chr(0b110010) + chr(0b110010) + chr(2568 - 2517), ord("\x08")), nzTpIcepk0o8(chr(436 - 388) + '\x6f' + chr(1271 - 1218) + chr(0b110000), 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\x32' + chr(1096 - 1044) + chr(49), 510 - 502), nzTpIcepk0o8('\x30' + '\x6f' + '\066', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b101000 + 0o107) + chr(959 - 910) + chr(1270 - 1219) + chr(0b11000 + 0o31), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\063' + chr(0b110111), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101101 + 0o2) + chr(50) + '\061' + '\x35', 24683 - 24675), nzTpIcepk0o8('\060' + chr(111) + chr(51) + chr(1950 - 1895) + chr(51), 22633 - 22625), nzTpIcepk0o8('\x30' + chr(0b1010001 + 0o36) + chr(54) + chr(2184 - 2131), 0o10), nzTpIcepk0o8('\x30' + chr(0b1001001 + 0o46) + '\061' + chr(920 - 871) + '\066', 12263 - 12255), nzTpIcepk0o8(chr(1066 - 1018) + chr(8205 - 8094) + chr(1512 - 1463) + chr(54) + chr(2370 - 2318), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + '\x33' + chr(292 - 238) + chr(0b11101 + 0o32), 59040 - 59032), nzTpIcepk0o8(chr(48) + '\x6f' + chr(49) + chr(2700 - 2647) + chr(0b1001 + 0o47), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(50) + chr(0b110111) + '\060', ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1037 - 986) + chr(0b110010), 0b1000), nzTpIcepk0o8('\x30' + chr(1640 - 1529) + '\x33' + '\x33' + chr(48), 0o10), nzTpIcepk0o8(chr(1620 - 1572) + '\157' + '\061' + '\062', 42497 - 42489), nzTpIcepk0o8('\x30' + '\x6f' + chr(51) + '\066', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110001) + chr(155 - 105) + chr(133 - 82), 26584 - 26576), nzTpIcepk0o8(chr(0b1000 + 0o50) + chr(0b1101111) + '\061' + '\067' + chr(0b110111), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1010010 + 0o35) + chr(1566 - 1515) + chr(863 - 814) + chr(2342 - 2291), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1419 - 1370) + chr(0b110 + 0o61) + chr(1149 - 1094), 8), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110011) + '\065' + chr(55), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + '\x35' + chr(0b110101), ord("\x08")), nzTpIcepk0o8(chr(2197 - 2149) + chr(0b1100101 + 0o12) + chr(0b11111 + 0o22) + chr(0b10100 + 0o42) + chr(48), 24291 - 24283), nzTpIcepk0o8(chr(0b11001 + 0o27) + chr(111) + chr(54) + chr(2501 - 2447), 0o10), nzTpIcepk0o8(chr(0b1100 + 0o44) + '\157' + chr(51) + chr(0b110001) + chr(0b1000 + 0o56), 59166 - 59158), nzTpIcepk0o8('\060' + chr(0b1001100 + 0o43) + '\063' + chr(811 - 762) + chr(1938 - 1887), 8), nzTpIcepk0o8('\060' + '\x6f' + '\x36' + chr(51), 0b1000), nzTpIcepk0o8(chr(1517 - 1469) + chr(0b11100 + 0o123) + '\062' + '\067' + chr(0b11001 + 0o30), 31274 - 31266), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x31' + chr(0b110011) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(2298 - 2250) + chr(0b1001101 + 0o42) + chr(71 - 20) + '\064' + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b11100 + 0o123) + '\x33' + '\x33' + chr(1793 - 1741), 0b1000), nzTpIcepk0o8('\x30' + chr(2956 - 2845) + chr(49) + chr(0b100010 + 0o25) + '\060', 3103 - 3095), nzTpIcepk0o8('\x30' + chr(111) + chr(2341 - 2288) + '\x32', 0o10), nzTpIcepk0o8('\060' + chr(0b1101010 + 0o5) + chr(0b100110 + 0o14) + chr(0b110001) + '\063', 27838 - 27830), nzTpIcepk0o8(chr(836 - 788) + '\157' + chr(0b101000 + 0o11) + chr(48) + '\x33', ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(49) + chr(48) + '\067', 29355 - 29347), nzTpIcepk0o8(chr(816 - 768) + chr(111) + chr(172 - 121) + '\x34' + chr(578 - 528), 8884 - 8876), nzTpIcepk0o8(chr(48) + '\157' + chr(49) + chr(0b110001) + chr(0b101111 + 0o1), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(0b100 + 0o153) + '\x35' + chr(48), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xbd'), '\144' + chr(0b101000 + 0o75) + chr(0b110010 + 0o61) + chr(111) + chr(0b1100100) + chr(0b110010 + 0o63))(chr(117) + chr(8345 - 8229) + chr(102) + chr(0b101101) + chr(0b101111 + 0o11)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def S4VzLIvVPlEK(c3cw__Om03DA, DB8z4Qfb0aaT, U39jSiI54Mlp, L4FQ82ZwPfu6): FksNMH1w_ns6 = roI3spqORKae(ES5oEprVxulp(b'\xd4M\xcfcy8\xf6\x8dT"\x01\x92\x15\x9f:\xb1d>0\x10\xa7\n\x82CPM\xad\xa4_\xc4{\x87\xb2\x1c\n\xf9,0\xc23\xe1G\xd6{y{\xe2\x9eFn\x1a\x98\x1c\x98{\xa8z{2\r\xeb\x16\x81\r\x04^\xab\xeb^\xdc/\x87\xbe\x17F\xe2 g\x8f\'\xf7M\xcd('), '\144' + chr(5901 - 5800) + '\143' + chr(12251 - 12140) + chr(100) + chr(0b1100101))(chr(0b11001 + 0o134) + chr(0b1110100) + chr(0b1100110) + chr(0b11110 + 0o17) + chr(0b11110 + 0o32)) for KBggEttLg7_8 in U39jSiI54Mlp: if roI3spqORKae(ES5oEprVxulp(b'\xf4M\xcfc'), chr(1565 - 1465) + '\145' + chr(0b1100011) + chr(111) + chr(0b1100100) + chr(101))(chr(0b1110101) + chr(0b1110100) + chr(0b0 + 0o146) + chr(1689 - 1644) + chr(2777 - 2721)) in KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'\xfbM\xc0b<m'), chr(0b1100100) + '\x65' + chr(1886 - 1787) + chr(409 - 298) + chr(159 - 59) + chr(0b1000111 + 0o36))(chr(117) + chr(116) + chr(0b11110 + 0o110) + chr(0b101101) + chr(0b111000))] and KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'\xe5I\xcds<'), '\144' + '\x65' + chr(0b1100011) + '\x6f' + chr(0b1000000 + 0o44) + '\145')('\165' + '\164' + chr(102) + chr(0b101101) + '\x38')] not in c3cw__Om03DA: FksNMH1w_ns6 = FksNMH1w_ns6.q33KG3foQ_CJ(value=KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'\xe5I\xcds<'), chr(0b1100100) + '\145' + chr(0b1100011) + chr(0b1101111) + '\144' + chr(6911 - 6810))('\165' + '\x74' + '\x66' + chr(55 - 10) + '\x38')], row=L4FQ82ZwPfu6, col=KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'\xfd]\xccd<m'), '\144' + '\145' + '\x63' + chr(0b1101111) + chr(100) + chr(0b101 + 0o140))(chr(0b1110101) + '\x74' + chr(102) + chr(45) + chr(0b111000))]) roI3spqORKae(DB8z4Qfb0aaT, roI3spqORKae(ES5oEprVxulp(b'\xdb|\xf22!x\xca\x94_!!\xc2'), chr(0b1010001 + 0o23) + '\145' + chr(0b101111 + 0o64) + chr(8449 - 8338) + chr(0b1100100) + chr(0b1001000 + 0o35))('\x75' + chr(116) + chr(102) + '\x2d' + '\x38'))({roI3spqORKae(ES5oEprVxulp(b'\xf0G\xc5c'), chr(0b111100 + 0o50) + chr(8128 - 8027) + chr(0b1100011) + chr(10654 - 10543) + '\144' + '\x65')(chr(12752 - 12635) + chr(0b1110100) + '\146' + chr(45) + chr(0b11110 + 0o32)): roI3spqORKae(ES5oEprVxulp(b'\xf1I\xc5+/~\xe1\x8eP'), chr(8472 - 8372) + '\145' + '\x63' + chr(0b1011001 + 0o26) + chr(0b110101 + 0o57) + '\x65')(chr(5031 - 4914) + '\164' + chr(5580 - 5478) + chr(0b101101) + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'\xfeM\xd2u8x\xe8'), chr(0b100 + 0o140) + chr(101) + chr(6544 - 6445) + chr(0b1011111 + 0o20) + chr(0b1100100 + 0o0) + chr(0b1100101 + 0o0))(chr(117) + chr(0b1110100) + '\x66' + chr(683 - 638) + chr(56)): FksNMH1w_ns6, roI3spqORKae(ES5oEprVxulp(b'\xe1G\xd6+7j\xe0\x99P<'), '\x64' + '\x65' + '\143' + chr(111) + chr(100) + chr(0b1100101))('\x75' + chr(10656 - 10540) + chr(0b1100110) + '\055' + chr(56)): L4FQ82ZwPfu6, roI3spqORKae(ES5oEprVxulp(b'\xf0G\xcds4q\xa0\x95@#\x16\x92\x1a'), chr(100) + '\x65' + chr(99) + chr(2958 - 2847) + chr(0b1001010 + 0o32) + '\145')(chr(117) + '\x74' + chr(0b111111 + 0o47) + chr(45) + chr(0b111000)): KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'\xfd]\xccd<m'), chr(100) + chr(0b1100101) + chr(0b1100011) + chr(111) + '\x64' + chr(0b100000 + 0o105))(chr(0b1110101) + '\164' + chr(0b1100110) + chr(1657 - 1612) + '\x38')]})
opencobra/memote
memote/experimental/checks.py
reaction_id_check
def reaction_id_check(reactions, errors, columns, row_number): """ Validate reactions identifiers against a known set. Parameters ---------- reactions : set The known set of reaction identifiers. errors : Passed by goodtables. columns : Passed by goodtables. row_number : Passed by goodtables. """ message = ("Reaction '{value}' in column {col} and row {row} does not " "appear in the metabolic model.") for column in columns: if "reaction" in column['header'] and column['value'] not in reactions: message = message.format( value=column['value'], row=row_number, col=column['number']) errors.append({ 'code': 'bad-value', 'message': message, 'row-number': row_number, 'column-number': column['number'], })
python
def reaction_id_check(reactions, errors, columns, row_number): """ Validate reactions identifiers against a known set. Parameters ---------- reactions : set The known set of reaction identifiers. errors : Passed by goodtables. columns : Passed by goodtables. row_number : Passed by goodtables. """ message = ("Reaction '{value}' in column {col} and row {row} does not " "appear in the metabolic model.") for column in columns: if "reaction" in column['header'] and column['value'] not in reactions: message = message.format( value=column['value'], row=row_number, col=column['number']) errors.append({ 'code': 'bad-value', 'message': message, 'row-number': row_number, 'column-number': column['number'], })
[ "def", "reaction_id_check", "(", "reactions", ",", "errors", ",", "columns", ",", "row_number", ")", ":", "message", "=", "(", "\"Reaction '{value}' in column {col} and row {row} does not \"", "\"appear in the metabolic model.\"", ")", "for", "column", "in", "columns", ":", "if", "\"reaction\"", "in", "column", "[", "'header'", "]", "and", "column", "[", "'value'", "]", "not", "in", "reactions", ":", "message", "=", "message", ".", "format", "(", "value", "=", "column", "[", "'value'", "]", ",", "row", "=", "row_number", ",", "col", "=", "column", "[", "'number'", "]", ")", "errors", ".", "append", "(", "{", "'code'", ":", "'bad-value'", ",", "'message'", ":", "message", ",", "'row-number'", ":", "row_number", ",", "'column-number'", ":", "column", "[", "'number'", "]", ",", "}", ")" ]
Validate reactions identifiers against a known set. Parameters ---------- reactions : set The known set of reaction identifiers. errors : Passed by goodtables. columns : Passed by goodtables. row_number : Passed by goodtables.
[ "Validate", "reactions", "identifiers", "against", "a", "known", "set", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/checks.py#L68-L97
train
Validate reactions identifiers against a known set.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(426 - 378) + '\157' + chr(0b11000 + 0o32) + chr(1461 - 1406) + chr(0b1111 + 0o44), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x35' + '\063', ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\063' + chr(52) + chr(0b100010 + 0o20), 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\063' + '\064', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\062' + chr(0b110100) + chr(49), 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(0b110000 + 0o3) + chr(54) + '\x34', 26867 - 26859), nzTpIcepk0o8('\060' + '\x6f' + chr(305 - 255) + chr(2402 - 2348) + '\066', 32758 - 32750), nzTpIcepk0o8('\060' + chr(111) + '\066' + '\x37', 0b1000), nzTpIcepk0o8(chr(0b101111 + 0o1) + '\x6f' + chr(0b11010 + 0o30) + chr(49) + chr(0b100110 + 0o16), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b10011 + 0o134) + chr(51) + chr(51) + chr(0b10010 + 0o40), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\063' + chr(1407 - 1353) + chr(0b11101 + 0o24), 64492 - 64484), nzTpIcepk0o8('\x30' + chr(111) + chr(2017 - 1965) + chr(377 - 328), 50747 - 50739), nzTpIcepk0o8('\x30' + '\157' + '\061' + chr(0b110111) + '\064', 64734 - 64726), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x31' + chr(0b10000 + 0o47) + chr(0b10 + 0o56), 44548 - 44540), nzTpIcepk0o8('\060' + '\157' + chr(509 - 458) + chr(0b110000) + '\060', ord("\x08")), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(111) + '\x31' + chr(1743 - 1693) + '\x35', 43591 - 43583), nzTpIcepk0o8('\x30' + chr(111) + chr(363 - 312) + chr(374 - 321) + chr(1121 - 1072), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(49) + chr(1882 - 1832) + chr(2465 - 2410), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(12311 - 12200) + chr(54) + chr(0b110000), 23828 - 23820), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(2252 - 2201) + chr(49) + chr(52), 0o10), nzTpIcepk0o8(chr(1949 - 1901) + chr(111) + chr(0b110010) + chr(0b110110) + '\x36', 8), nzTpIcepk0o8('\060' + '\x6f' + chr(0b10011 + 0o40) + '\x35' + chr(0b110011), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1000011 + 0o54) + chr(1377 - 1327) + chr(0b110111) + chr(0b101011 + 0o7), 0o10), nzTpIcepk0o8(chr(708 - 660) + '\157' + chr(0b10010 + 0o43) + chr(0b1111 + 0o41), 0b1000), nzTpIcepk0o8('\x30' + chr(4163 - 4052) + chr(2362 - 2311) + chr(50), ord("\x08")), nzTpIcepk0o8(chr(1213 - 1165) + chr(7190 - 7079) + chr(1406 - 1357) + chr(2462 - 2410) + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(1394 - 1339), 0o10), nzTpIcepk0o8(chr(48) + chr(808 - 697) + chr(0b110 + 0o55) + chr(49) + '\x32', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110010) + chr(0b110101) + chr(0b100000 + 0o26), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x33' + '\x36', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b101010 + 0o105) + chr(2092 - 2042) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(1237 - 1189) + chr(806 - 695) + '\x33' + chr(144 - 94) + '\065', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b100010 + 0o21) + chr(0b110011) + chr(54), 11421 - 11413), nzTpIcepk0o8('\060' + chr(6670 - 6559) + chr(0b110011) + '\062', 8), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110111) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(51) + chr(2658 - 2603) + chr(1401 - 1346), 0b1000), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(0b1101110 + 0o1) + chr(2063 - 2010) + chr(0b110011), 8), nzTpIcepk0o8('\x30' + '\157' + chr(0b110011) + chr(0b11000 + 0o32) + chr(0b1 + 0o64), 8), nzTpIcepk0o8('\x30' + chr(0b1000 + 0o147) + chr(0b110011) + chr(0b110010 + 0o3) + chr(2915 - 2861), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(50) + '\065', 49737 - 49729)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + '\157' + chr(53) + chr(48), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x95'), chr(6421 - 6321) + '\x65' + '\x63' + '\157' + chr(0b1000100 + 0o40) + chr(0b1100101))('\x75' + '\x74' + chr(102) + chr(1054 - 1009) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def TTnio4WTR6w3(wZuIG55W5k2m, DB8z4Qfb0aaT, U39jSiI54Mlp, L4FQ82ZwPfu6): FksNMH1w_ns6 = roI3spqORKae(ES5oEprVxulp(b'\xe9N\x83\x7f\xd5\x9d\xd9Y\xac\xfd\x8aW\x1d\x14\xb50\x94p\x10\xa5\xd8\xcb\xd9Gv\x12j\xa4\x8eep\xba\xb2g\x1b\x9eE\xb1\xceg\xd4\\\xc2g\xd3\x9b\xc1J\xac\xbe\x9eD\x0fX\xae:\x9dwQ\xbc\xc6\x8e\xdbZ:\x0ei\xea\xdavv\xf5\xb3\x7fO\x9eI\xba\x82|\xd8\x0b\x8fs\xc5\x91\xda\x19'), chr(100) + '\x65' + chr(0b111111 + 0o44) + chr(0b1101111) + chr(0b1100100) + chr(0b1100001 + 0o4))(chr(0b1110101) + chr(618 - 502) + chr(0b1100110) + chr(0b101101) + chr(56)) for KBggEttLg7_8 in U39jSiI54Mlp: if roI3spqORKae(ES5oEprVxulp(b'\xc9N\x83\x7f\xd5\x9d\xd9Y'), chr(0b110001 + 0o63) + chr(0b1100101) + chr(0b110111 + 0o54) + '\x6f' + chr(0b110011 + 0o61) + chr(101))(chr(0b1011 + 0o152) + chr(116) + '\x66' + chr(0b101101) + '\x38') in KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'\xd3N\x83x\xc4\x86'), '\x64' + chr(2730 - 2629) + '\x63' + '\x6f' + chr(100) + '\145')('\x75' + '\x74' + chr(102) + chr(0b11111 + 0o16) + '\x38')] and KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'\xcdJ\x8ei\xc4'), chr(100) + '\145' + '\143' + chr(111) + chr(0b1011111 + 0o5) + '\145')(chr(0b1110101) + '\164' + chr(102) + chr(1460 - 1415) + chr(0b111000))] not in wZuIG55W5k2m: FksNMH1w_ns6 = FksNMH1w_ns6.q33KG3foQ_CJ(value=KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'\xcdJ\x8ei\xc4'), '\144' + chr(0b1101 + 0o130) + chr(99) + chr(8480 - 8369) + chr(1536 - 1436) + chr(0b1000110 + 0o37))(chr(9204 - 9087) + chr(0b1000 + 0o154) + '\146' + chr(0b101101) + chr(56))], row=L4FQ82ZwPfu6, col=KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'\xd5^\x8f~\xc4\x86'), chr(100) + chr(0b1010100 + 0o21) + chr(0b1100011) + chr(0b1101111) + '\144' + '\145')(chr(0b100001 + 0o124) + '\164' + chr(0b1100110) + chr(1646 - 1601) + chr(56))]) roI3spqORKae(DB8z4Qfb0aaT, roI3spqORKae(ES5oEprVxulp(b'\xf3\x7f\xb1(\xd9\x93\xf1X\xe6\xb5\xa4\x14'), '\x64' + '\x65' + '\143' + chr(111) + chr(7399 - 7299) + '\145')(chr(117) + chr(0b1010101 + 0o37) + chr(0b1100110) + chr(0b10 + 0o53) + '\x38'))({roI3spqORKae(ES5oEprVxulp(b'\xd8D\x86y'), chr(5834 - 5734) + chr(9083 - 8982) + chr(3941 - 3842) + chr(8486 - 8375) + chr(100) + chr(101))(chr(0b100010 + 0o123) + chr(0b1110100) + chr(0b1000101 + 0o41) + chr(0b1111 + 0o36) + '\070'): roI3spqORKae(ES5oEprVxulp(b'\xd9J\x861\xd7\x95\xdaB\xe9'), chr(0b1100100) + chr(9093 - 8992) + '\143' + chr(0b1101111) + chr(5994 - 5894) + '\145')(chr(2584 - 2467) + chr(116) + chr(9443 - 9341) + chr(321 - 276) + chr(0b10011 + 0o45)), roI3spqORKae(ES5oEprVxulp(b'\xd6N\x91o\xc0\x93\xd3'), '\x64' + chr(0b1100101) + chr(99) + '\157' + '\x64' + '\x65')(chr(2169 - 2052) + chr(0b1110100) + chr(0b10001 + 0o125) + '\x2d' + chr(817 - 761)): FksNMH1w_ns6, roI3spqORKae(ES5oEprVxulp(b'\xc9D\x951\xcf\x81\xdbU\xe9\xa8'), chr(3813 - 3713) + '\x65' + chr(0b1000010 + 0o41) + '\x6f' + chr(2137 - 2037) + chr(0b1001011 + 0o32))('\x75' + chr(12329 - 12213) + chr(2417 - 2315) + chr(1314 - 1269) + chr(0b110 + 0o62)): L4FQ82ZwPfu6, roI3spqORKae(ES5oEprVxulp(b'\xd8D\x8ei\xcc\x9a\x9bY\xf9\xb7\x93D\x0e'), '\x64' + chr(919 - 818) + chr(0b111000 + 0o53) + chr(111) + chr(0b1011010 + 0o12) + chr(0b1100101))(chr(117) + chr(0b11011 + 0o131) + '\146' + chr(1890 - 1845) + '\070'): KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'\xd5^\x8f~\xc4\x86'), chr(100) + chr(101) + '\x63' + '\x6f' + '\144' + chr(6835 - 6734))(chr(10861 - 10744) + '\164' + chr(8998 - 8896) + chr(0b11011 + 0o22) + '\070')]})
opencobra/memote
memote/experimental/checks.py
metabolite_id_check
def metabolite_id_check(metabolites, errors, columns, row_number): """ Validate metabolite identifiers against a known set. Parameters ---------- metabolites : set The known set of metabolite identifiers. errors : Passed by goodtables. columns : Passed by goodtables. row_number : Passed by goodtables. """ message = ("Metabolite '{value}' in column {col} and row {row} does not " "appear in the metabolic model.") for column in columns: if "metabolite" in column['header'] and \ column['value'] not in metabolites: message = message.format( value=column['value'], row=row_number, col=column['number']) errors.append({ 'code': 'bad-value', 'message': message, 'row-number': row_number, 'column-number': column['number'], })
python
def metabolite_id_check(metabolites, errors, columns, row_number): """ Validate metabolite identifiers against a known set. Parameters ---------- metabolites : set The known set of metabolite identifiers. errors : Passed by goodtables. columns : Passed by goodtables. row_number : Passed by goodtables. """ message = ("Metabolite '{value}' in column {col} and row {row} does not " "appear in the metabolic model.") for column in columns: if "metabolite" in column['header'] and \ column['value'] not in metabolites: message = message.format( value=column['value'], row=row_number, col=column['number']) errors.append({ 'code': 'bad-value', 'message': message, 'row-number': row_number, 'column-number': column['number'], })
[ "def", "metabolite_id_check", "(", "metabolites", ",", "errors", ",", "columns", ",", "row_number", ")", ":", "message", "=", "(", "\"Metabolite '{value}' in column {col} and row {row} does not \"", "\"appear in the metabolic model.\"", ")", "for", "column", "in", "columns", ":", "if", "\"metabolite\"", "in", "column", "[", "'header'", "]", "and", "column", "[", "'value'", "]", "not", "in", "metabolites", ":", "message", "=", "message", ".", "format", "(", "value", "=", "column", "[", "'value'", "]", ",", "row", "=", "row_number", ",", "col", "=", "column", "[", "'number'", "]", ")", "errors", ".", "append", "(", "{", "'code'", ":", "'bad-value'", ",", "'message'", ":", "message", ",", "'row-number'", ":", "row_number", ",", "'column-number'", ":", "column", "[", "'number'", "]", ",", "}", ")" ]
Validate metabolite identifiers against a known set. Parameters ---------- metabolites : set The known set of metabolite identifiers. errors : Passed by goodtables. columns : Passed by goodtables. row_number : Passed by goodtables.
[ "Validate", "metabolite", "identifiers", "against", "a", "known", "set", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/checks.py#L101-L131
train
Validate metabolite identifiers against a known set.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(2137 - 2089) + '\157' + chr(0b110001) + '\061' + '\067', ord("\x08")), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(111) + chr(49) + '\x30' + '\x32', ord("\x08")), nzTpIcepk0o8('\060' + chr(11272 - 11161) + chr(852 - 801) + chr(0b110011) + chr(1477 - 1426), 0o10), nzTpIcepk0o8('\060' + '\157' + chr(53), ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\x32' + chr(0b10100 + 0o40) + chr(55), 36737 - 36729), nzTpIcepk0o8(chr(1795 - 1747) + '\157' + chr(1241 - 1192) + chr(0b10111 + 0o35) + '\x33', 59653 - 59645), nzTpIcepk0o8('\060' + chr(5771 - 5660) + chr(0b11111 + 0o23) + '\063', 44393 - 44385), nzTpIcepk0o8(chr(0b110000) + chr(0b100001 + 0o116) + chr(51) + '\063', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + '\063' + '\065' + chr(48), 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110001) + chr(52) + '\061', 0b1000), nzTpIcepk0o8(chr(0b101101 + 0o3) + '\x6f' + '\061' + chr(889 - 836) + chr(0b1010 + 0o55), 0b1000), nzTpIcepk0o8(chr(0b11111 + 0o21) + chr(111) + '\x31' + chr(780 - 727) + chr(51), 34839 - 34831), nzTpIcepk0o8(chr(2090 - 2042) + chr(111) + '\x32' + '\x36' + chr(2067 - 2019), ord("\x08")), nzTpIcepk0o8(chr(2187 - 2139) + chr(0b1001010 + 0o45) + '\063' + chr(0b110101) + chr(823 - 774), ord("\x08")), nzTpIcepk0o8(chr(1174 - 1126) + '\157' + '\x33' + '\x32' + '\066', 0b1000), nzTpIcepk0o8(chr(2227 - 2179) + '\x6f' + '\x31' + chr(0b110001) + chr(0b101011 + 0o6), ord("\x08")), nzTpIcepk0o8(chr(0b11001 + 0o27) + chr(0b1000 + 0o147) + chr(0b110001 + 0o2) + chr(0b1110 + 0o50) + chr(0b11010 + 0o34), 16457 - 16449), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(111) + chr(0b110010) + chr(1740 - 1686) + chr(55), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\062' + chr(52) + chr(49), 54232 - 54224), nzTpIcepk0o8('\060' + '\157' + '\x31' + chr(0b110001) + '\064', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(0b110001) + chr(0b110011) + chr(448 - 397), 0b1000), nzTpIcepk0o8(chr(1056 - 1008) + chr(0b1011011 + 0o24) + chr(49) + '\067' + chr(53), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b101001 + 0o15) + chr(0b110001), 0o10), nzTpIcepk0o8(chr(0b1110 + 0o42) + '\x6f' + chr(1092 - 1042) + chr(2785 - 2730) + chr(0b110010), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(11645 - 11534) + '\x32', 0o10), nzTpIcepk0o8(chr(213 - 165) + chr(1674 - 1563) + chr(0b101001 + 0o11) + '\x30' + chr(49), 0b1000), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(0b1010001 + 0o36) + chr(2476 - 2425) + chr(0b100010 + 0o17) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(2287 - 2239) + chr(0b1011111 + 0o20) + chr(0b110001) + chr(0b110111) + '\x31', 25808 - 25800), nzTpIcepk0o8(chr(0b101001 + 0o7) + chr(0b1011010 + 0o25) + chr(806 - 756) + chr(1289 - 1238), 8), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(975 - 926) + '\062' + chr(48), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(49) + chr(1665 - 1617) + '\x36', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(451 - 402) + '\x30' + chr(0b110100), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x31' + '\062' + chr(48), 8), nzTpIcepk0o8(chr(1827 - 1779) + '\157' + chr(0b100110 + 0o14) + chr(767 - 718) + '\065', 41366 - 41358), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(1691 - 1640) + '\060' + chr(1445 - 1394), 0o10), nzTpIcepk0o8('\060' + '\157' + chr(0b110011) + chr(0b110100) + '\x30', 47984 - 47976), nzTpIcepk0o8(chr(0b101110 + 0o2) + chr(111) + chr(0b1100 + 0o47) + chr(53) + '\061', 8), nzTpIcepk0o8(chr(0b10011 + 0o35) + chr(0b1101111) + '\x35' + '\x30', 49029 - 49021), nzTpIcepk0o8('\x30' + chr(9510 - 9399) + chr(1101 - 1048) + '\060', 8), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x32' + chr(55), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1717 - 1669) + chr(111) + '\065' + chr(231 - 183), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'a'), chr(2547 - 2447) + chr(2609 - 2508) + chr(0b1010011 + 0o20) + chr(5664 - 5553) + chr(0b111000 + 0o54) + chr(101))('\x75' + '\x74' + '\x66' + '\055' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def We5xq4YWF9LN(nEF0RXSdESqB, DB8z4Qfb0aaT, U39jSiI54Mlp, L4FQ82ZwPfu6): FksNMH1w_ns6 = roI3spqORKae(ES5oEprVxulp(b"\x02'\xafd\xc5\x0c\x7fr\x9c\x04OL\xcb\x9f\xb7%\x83\xd2\xdck{\x14_\x9aa\xee\xa7\x0c~>f?3\xe2\xaf\x9d\xc9IFso0\xb4r\x87\x18at\x9f\x1cO\x0f\xdf\x8c\xa5i\x98\xd8\xd5l:\rA\xdfc\xf3\xeb\x10}p2,5\xad\xae\x85\x9dIJx#+\xb8%\xca\x0cw~\x84O"), chr(7816 - 7716) + chr(0b1011101 + 0o10) + chr(454 - 355) + '\157' + chr(102 - 2) + '\x65')(chr(206 - 89) + chr(2878 - 2762) + chr(102) + '\x2d' + '\070') for KBggEttLg7_8 in U39jSiI54Mlp: if roI3spqORKae(ES5oEprVxulp(b'"\'\xafd\xc5\x0c\x7fr\x9c\x04'), chr(0b1100100) + chr(6665 - 6564) + chr(0b1011 + 0o130) + '\157' + '\x64' + '\x65')(chr(0b1110101) + '\x74' + chr(102) + '\055' + chr(2415 - 2359)) in KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b"''\xbaa\xc2\x11"), chr(0b1100100) + chr(101) + chr(0b1100011) + '\157' + chr(0b100100 + 0o100) + chr(0b111111 + 0o46))(chr(117) + '\164' + '\146' + chr(0b11011 + 0o22) + chr(0b11101 + 0o33))] and KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'9#\xb7p\xc2'), chr(0b1100100) + chr(0b1100101) + '\143' + chr(111) + chr(7100 - 7000) + chr(1585 - 1484))('\x75' + chr(116) + chr(102) + '\055' + chr(1763 - 1707))] not in nEF0RXSdESqB: FksNMH1w_ns6 = FksNMH1w_ns6.q33KG3foQ_CJ(value=KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'9#\xb7p\xc2'), '\x64' + chr(0b111011 + 0o52) + '\x63' + chr(0b1101111) + chr(6390 - 6290) + '\145')(chr(117) + chr(0b110111 + 0o75) + chr(0b10110 + 0o120) + chr(1275 - 1230) + '\x38')], row=L4FQ82ZwPfu6, col=KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'!7\xb6g\xc2\x11'), chr(100) + chr(101) + chr(1528 - 1429) + chr(10945 - 10834) + chr(6346 - 6246) + chr(0b1100101))(chr(117) + chr(8050 - 7934) + chr(0b1100110) + chr(45) + chr(0b100010 + 0o26))]) roI3spqORKae(DB8z4Qfb0aaT, roI3spqORKae(ES5oEprVxulp(b'\x07\x16\x881\xdf\x04Tt\x82\x0e:^'), chr(100) + '\145' + '\x63' + chr(3335 - 3224) + chr(0b1100100) + chr(3312 - 3211))(chr(117) + chr(9955 - 9839) + '\x66' + chr(45) + '\070'))({roI3spqORKae(ES5oEprVxulp(b',-\xbf`'), chr(100) + '\145' + '\x63' + chr(6099 - 5988) + chr(4660 - 4560) + chr(101))(chr(591 - 474) + chr(116) + chr(5452 - 5350) + chr(45) + '\x38'): roI3spqORKae(ES5oEprVxulp(b'-#\xbf(\xd1\x02\x7fn\x8d'), chr(0b1010 + 0o132) + '\x65' + chr(99) + '\x6f' + chr(3324 - 3224) + chr(101))('\x75' + chr(9821 - 9705) + chr(0b111010 + 0o54) + chr(0b111 + 0o46) + chr(726 - 670)), roI3spqORKae(ES5oEprVxulp(b'"\'\xa8v\xc6\x04v'), '\x64' + chr(0b1100101) + '\x63' + '\x6f' + '\144' + chr(0b100111 + 0o76))(chr(11895 - 11778) + chr(0b1110100) + '\x66' + '\x2d' + chr(0b110010 + 0o6)): FksNMH1w_ns6, roI3spqORKae(ES5oEprVxulp(b'=-\xac(\xc9\x16~y\x8d\x13'), chr(100) + chr(0b1100101) + chr(5504 - 5405) + chr(111) + '\x64' + '\x65')(chr(0b1110101) + chr(7478 - 7362) + chr(2080 - 1978) + '\x2d' + '\x38'): L4FQ82ZwPfu6, roI3spqORKae(ES5oEprVxulp(b',-\xb7p\xca\r>u\x9d\x0c\r\x0e\xc2'), chr(100) + chr(101) + '\143' + chr(0b1101111) + '\x64' + '\145')(chr(117) + chr(0b11011 + 0o131) + chr(102) + chr(255 - 210) + chr(56)): KBggEttLg7_8[roI3spqORKae(ES5oEprVxulp(b'!7\xb6g\xc2\x11'), chr(0b111000 + 0o54) + '\145' + chr(0b1100011) + '\157' + '\x64' + '\145')(chr(0b1110101) + '\x74' + chr(102) + chr(215 - 170) + chr(0b1010 + 0o56))]})
opencobra/memote
memote/suite/cli/runner.py
run
def run(model, collect, filename, location, ignore_git, pytest_args, exclusive, skip, solver, experimental, custom_tests, deployment, skip_unchanged): """ Run the test suite on a single model and collect results. MODEL: Path to model file. Can also be supplied via the environment variable MEMOTE_MODEL or configured in 'setup.cfg' or 'memote.ini'. """ def is_verbose(arg): return (arg.startswith("--verbosity") or arg.startswith("-v") or arg.startswith("--verbose") or arg.startswith("-q") or arg.startswith("--quiet")) if ignore_git: repo = None else: callbacks.git_installed() repo = callbacks.probe_git() if collect: if repo is not None: if location is None: LOGGER.critical( "Working with a repository requires a storage location.") sys.exit(1) if not any(a.startswith("--tb") for a in pytest_args): pytest_args = ["--tb", "short"] + pytest_args if not any(is_verbose(a) for a in pytest_args): pytest_args.append("-vv") # Check if the model was changed in this commit. Exit `memote run` if this # was not the case. if skip_unchanged and repo is not None: commit = repo.head.commit if not is_modified(model, commit): LOGGER.info("The model was not modified in commit '%s'. Skipping.", commit.hexsha) sys.exit(0) # Add further directories to search for tests. pytest_args.extend(custom_tests) # Check if the model can be loaded at all. model, sbml_ver, notifications = api.validate_model(model) if model is None: LOGGER.critical( "The model could not be loaded due to the following SBML errors.") stdout_notifications(notifications) sys.exit(1) model.solver = solver # Load the experimental configuration using model information. if experimental is not None: experimental.load(model) code, result = api.test_model( model=model, sbml_version=sbml_ver, results=True, pytest_args=pytest_args, skip=skip, exclusive=exclusive, experimental=experimental) if collect: if repo is None: manager = ResultManager() manager.store(result, filename=filename) else: LOGGER.info("Checking out deployment branch.") # If the repo HEAD is pointing to the most recent branch then # GitPython's `repo.active_branch` works. Yet, if the repo is in # detached HEAD state, i.e., when a user has checked out a specific # commit as opposed to a branch, this won't work and throw a # `TypeError`, which we are circumventing below. try: previous = repo.active_branch previous_cmt = previous.commit is_branch = True except TypeError: previous_cmt = repo.head.commit is_branch = False repo.git.checkout(deployment) try: manager = SQLResultManager(repository=repo, location=location) except (AttributeError, ArgumentError): manager = RepoResultManager(repository=repo, location=location) LOGGER.info( "Committing result and changing back to working branch.") manager.store(result, commit=previous_cmt.hexsha) repo.git.add(".") check_call( ['git', 'commit', '-m', "chore: add result for {}".format(previous_cmt.hexsha)] ) if is_branch: previous.checkout() else: repo.commit(previous_cmt)
python
def run(model, collect, filename, location, ignore_git, pytest_args, exclusive, skip, solver, experimental, custom_tests, deployment, skip_unchanged): """ Run the test suite on a single model and collect results. MODEL: Path to model file. Can also be supplied via the environment variable MEMOTE_MODEL or configured in 'setup.cfg' or 'memote.ini'. """ def is_verbose(arg): return (arg.startswith("--verbosity") or arg.startswith("-v") or arg.startswith("--verbose") or arg.startswith("-q") or arg.startswith("--quiet")) if ignore_git: repo = None else: callbacks.git_installed() repo = callbacks.probe_git() if collect: if repo is not None: if location is None: LOGGER.critical( "Working with a repository requires a storage location.") sys.exit(1) if not any(a.startswith("--tb") for a in pytest_args): pytest_args = ["--tb", "short"] + pytest_args if not any(is_verbose(a) for a in pytest_args): pytest_args.append("-vv") # Check if the model was changed in this commit. Exit `memote run` if this # was not the case. if skip_unchanged and repo is not None: commit = repo.head.commit if not is_modified(model, commit): LOGGER.info("The model was not modified in commit '%s'. Skipping.", commit.hexsha) sys.exit(0) # Add further directories to search for tests. pytest_args.extend(custom_tests) # Check if the model can be loaded at all. model, sbml_ver, notifications = api.validate_model(model) if model is None: LOGGER.critical( "The model could not be loaded due to the following SBML errors.") stdout_notifications(notifications) sys.exit(1) model.solver = solver # Load the experimental configuration using model information. if experimental is not None: experimental.load(model) code, result = api.test_model( model=model, sbml_version=sbml_ver, results=True, pytest_args=pytest_args, skip=skip, exclusive=exclusive, experimental=experimental) if collect: if repo is None: manager = ResultManager() manager.store(result, filename=filename) else: LOGGER.info("Checking out deployment branch.") # If the repo HEAD is pointing to the most recent branch then # GitPython's `repo.active_branch` works. Yet, if the repo is in # detached HEAD state, i.e., when a user has checked out a specific # commit as opposed to a branch, this won't work and throw a # `TypeError`, which we are circumventing below. try: previous = repo.active_branch previous_cmt = previous.commit is_branch = True except TypeError: previous_cmt = repo.head.commit is_branch = False repo.git.checkout(deployment) try: manager = SQLResultManager(repository=repo, location=location) except (AttributeError, ArgumentError): manager = RepoResultManager(repository=repo, location=location) LOGGER.info( "Committing result and changing back to working branch.") manager.store(result, commit=previous_cmt.hexsha) repo.git.add(".") check_call( ['git', 'commit', '-m', "chore: add result for {}".format(previous_cmt.hexsha)] ) if is_branch: previous.checkout() else: repo.commit(previous_cmt)
[ "def", "run", "(", "model", ",", "collect", ",", "filename", ",", "location", ",", "ignore_git", ",", "pytest_args", ",", "exclusive", ",", "skip", ",", "solver", ",", "experimental", ",", "custom_tests", ",", "deployment", ",", "skip_unchanged", ")", ":", "def", "is_verbose", "(", "arg", ")", ":", "return", "(", "arg", ".", "startswith", "(", "\"--verbosity\"", ")", "or", "arg", ".", "startswith", "(", "\"-v\"", ")", "or", "arg", ".", "startswith", "(", "\"--verbose\"", ")", "or", "arg", ".", "startswith", "(", "\"-q\"", ")", "or", "arg", ".", "startswith", "(", "\"--quiet\"", ")", ")", "if", "ignore_git", ":", "repo", "=", "None", "else", ":", "callbacks", ".", "git_installed", "(", ")", "repo", "=", "callbacks", ".", "probe_git", "(", ")", "if", "collect", ":", "if", "repo", "is", "not", "None", ":", "if", "location", "is", "None", ":", "LOGGER", ".", "critical", "(", "\"Working with a repository requires a storage location.\"", ")", "sys", ".", "exit", "(", "1", ")", "if", "not", "any", "(", "a", ".", "startswith", "(", "\"--tb\"", ")", "for", "a", "in", "pytest_args", ")", ":", "pytest_args", "=", "[", "\"--tb\"", ",", "\"short\"", "]", "+", "pytest_args", "if", "not", "any", "(", "is_verbose", "(", "a", ")", "for", "a", "in", "pytest_args", ")", ":", "pytest_args", ".", "append", "(", "\"-vv\"", ")", "# Check if the model was changed in this commit. Exit `memote run` if this", "# was not the case.", "if", "skip_unchanged", "and", "repo", "is", "not", "None", ":", "commit", "=", "repo", ".", "head", ".", "commit", "if", "not", "is_modified", "(", "model", ",", "commit", ")", ":", "LOGGER", ".", "info", "(", "\"The model was not modified in commit '%s'. Skipping.\"", ",", "commit", ".", "hexsha", ")", "sys", ".", "exit", "(", "0", ")", "# Add further directories to search for tests.", "pytest_args", ".", "extend", "(", "custom_tests", ")", "# Check if the model can be loaded at all.", "model", ",", "sbml_ver", ",", "notifications", "=", "api", ".", "validate_model", "(", "model", ")", "if", "model", "is", "None", ":", "LOGGER", ".", "critical", "(", "\"The model could not be loaded due to the following SBML errors.\"", ")", "stdout_notifications", "(", "notifications", ")", "sys", ".", "exit", "(", "1", ")", "model", ".", "solver", "=", "solver", "# Load the experimental configuration using model information.", "if", "experimental", "is", "not", "None", ":", "experimental", ".", "load", "(", "model", ")", "code", ",", "result", "=", "api", ".", "test_model", "(", "model", "=", "model", ",", "sbml_version", "=", "sbml_ver", ",", "results", "=", "True", ",", "pytest_args", "=", "pytest_args", ",", "skip", "=", "skip", ",", "exclusive", "=", "exclusive", ",", "experimental", "=", "experimental", ")", "if", "collect", ":", "if", "repo", "is", "None", ":", "manager", "=", "ResultManager", "(", ")", "manager", ".", "store", "(", "result", ",", "filename", "=", "filename", ")", "else", ":", "LOGGER", ".", "info", "(", "\"Checking out deployment branch.\"", ")", "# If the repo HEAD is pointing to the most recent branch then", "# GitPython's `repo.active_branch` works. Yet, if the repo is in", "# detached HEAD state, i.e., when a user has checked out a specific", "# commit as opposed to a branch, this won't work and throw a", "# `TypeError`, which we are circumventing below.", "try", ":", "previous", "=", "repo", ".", "active_branch", "previous_cmt", "=", "previous", ".", "commit", "is_branch", "=", "True", "except", "TypeError", ":", "previous_cmt", "=", "repo", ".", "head", ".", "commit", "is_branch", "=", "False", "repo", ".", "git", ".", "checkout", "(", "deployment", ")", "try", ":", "manager", "=", "SQLResultManager", "(", "repository", "=", "repo", ",", "location", "=", "location", ")", "except", "(", "AttributeError", ",", "ArgumentError", ")", ":", "manager", "=", "RepoResultManager", "(", "repository", "=", "repo", ",", "location", "=", "location", ")", "LOGGER", ".", "info", "(", "\"Committing result and changing back to working branch.\"", ")", "manager", ".", "store", "(", "result", ",", "commit", "=", "previous_cmt", ".", "hexsha", ")", "repo", ".", "git", ".", "add", "(", "\".\"", ")", "check_call", "(", "[", "'git'", ",", "'commit'", ",", "'-m'", ",", "\"chore: add result for {}\"", ".", "format", "(", "previous_cmt", ".", "hexsha", ")", "]", ")", "if", "is_branch", ":", "previous", ".", "checkout", "(", ")", "else", ":", "repo", ".", "commit", "(", "previous_cmt", ")" ]
Run the test suite on a single model and collect results. MODEL: Path to model file. Can also be supplied via the environment variable MEMOTE_MODEL or configured in 'setup.cfg' or 'memote.ini'.
[ "Run", "the", "test", "suite", "on", "a", "single", "model", "and", "collect", "results", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/cli/runner.py#L133-L222
train
Run the memote test suite on a single model and collect results.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(0b1 + 0o156) + '\x31' + chr(0b110111) + '\x32', ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(51) + '\062' + chr(700 - 647), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110011) + '\061' + '\x31', 64408 - 64400), nzTpIcepk0o8(chr(0b11101 + 0o23) + '\157' + chr(0b110111) + '\067', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(49) + chr(0b110100) + '\066', 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\x32' + chr(51) + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(0b11011 + 0o25) + chr(9002 - 8891) + chr(50) + chr(0b110010) + '\x36', 0o10), nzTpIcepk0o8('\x30' + chr(6803 - 6692) + chr(0b101110 + 0o2), 49727 - 49719), nzTpIcepk0o8(chr(363 - 315) + chr(0b1101111) + '\x31' + chr(50) + '\064', 57237 - 57229), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\062' + chr(0b101001 + 0o16) + chr(52), 0o10), nzTpIcepk0o8('\x30' + '\157' + '\x32' + '\066' + chr(51), ord("\x08")), nzTpIcepk0o8(chr(1049 - 1001) + chr(0b101110 + 0o101) + chr(0b110111) + '\066', 40726 - 40718), nzTpIcepk0o8(chr(0b110000) + chr(9508 - 9397) + chr(0b110011) + '\065' + chr(0b11011 + 0o31), 9915 - 9907), nzTpIcepk0o8(chr(48) + '\157' + chr(1364 - 1315) + '\064' + '\066', 8), nzTpIcepk0o8('\060' + chr(6154 - 6043) + chr(0b110101 + 0o0) + chr(0b110110), 0o10), nzTpIcepk0o8(chr(1097 - 1049) + chr(111) + chr(54), 0o10), nzTpIcepk0o8('\x30' + chr(7663 - 7552) + chr(52), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x33' + '\x31' + chr(50), 0b1000), nzTpIcepk0o8('\060' + '\157' + '\x32' + chr(52) + chr(826 - 778), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(3012 - 2901) + chr(51) + '\x33' + '\x33', 47436 - 47428), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b1000 + 0o52) + chr(2635 - 2583) + chr(0b100 + 0o61), 19724 - 19716), nzTpIcepk0o8('\060' + chr(8454 - 8343) + chr(1708 - 1658) + chr(54) + chr(0b110110), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\062' + '\x34' + '\062', 0o10), nzTpIcepk0o8(chr(0b100110 + 0o12) + chr(0b10111 + 0o130) + chr(332 - 283) + chr(0b100111 + 0o20) + '\060', 0o10), nzTpIcepk0o8(chr(48) + chr(3221 - 3110) + chr(0b110011) + chr(0b100001 + 0o21) + chr(1011 - 961), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\x32' + chr(0b110010) + chr(52), 39412 - 39404), nzTpIcepk0o8(chr(0b110000) + chr(3773 - 3662) + '\x34' + '\x37', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(51) + chr(0b110010) + chr(2294 - 2244), 8), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(111) + chr(0b110011) + chr(1112 - 1057) + chr(1426 - 1378), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(0b110010) + '\x36' + chr(796 - 745), 8), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(1295 - 1246) + chr(1412 - 1362) + '\062', ord("\x08")), nzTpIcepk0o8(chr(452 - 404) + chr(0b1010001 + 0o36) + '\x35' + chr(0b100001 + 0o22), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b10100 + 0o36) + chr(55), 0o10), nzTpIcepk0o8(chr(204 - 156) + '\157' + '\x32' + chr(54) + '\x37', 0b1000), nzTpIcepk0o8(chr(1155 - 1107) + '\x6f' + chr(2342 - 2293) + '\061' + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(396 - 348) + chr(138 - 27) + '\x34' + chr(54), 5341 - 5333), nzTpIcepk0o8('\x30' + '\157' + chr(804 - 755) + '\063' + chr(0b101010 + 0o10), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001 + 0o1) + chr(0b110001 + 0o3) + chr(53), 8), nzTpIcepk0o8(chr(209 - 161) + chr(111) + '\x32' + '\061' + '\060', 0b1000), nzTpIcepk0o8(chr(0b100000 + 0o20) + '\x6f' + chr(0b101110 + 0o3) + chr(51) + chr(0b101100 + 0o12), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(0b1101111) + chr(0b110101) + '\060', ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'T'), chr(7321 - 7221) + chr(0b1100101) + chr(0b1100011) + chr(0b1010 + 0o145) + chr(0b1100100) + chr(0b111111 + 0o46))(chr(117) + chr(116) + chr(102) + '\055' + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def qnPOIdBQJdzY(KW0sEfjlgNpM, yR6CsKhX9PvC, FxZHtXEolYsL, y87dwGy_Qoj4, obglt5Iuxtj3, fb8WsB9zCZty, ZE_mm5xfJV8I, mi8KHiEXG5cT, P4Y_Z4y10OvJ, R_JAyWYiYGgX, cMU2RmUmpVIt, WmHBd5brnc0m, V_r3L4igrzbs): def glQ0ASzL43Ag(S6EI_gyMl2nC): return roI3spqORKae(S6EI_gyMl2nC, roI3spqORKae(ES5oEprVxulp(b'\t\xa1\xa8M\x12\xef\xe1i \xd4'), '\x64' + chr(6363 - 6262) + '\x63' + '\157' + '\x64' + '\x65')(chr(0b1110101) + '\x74' + '\146' + '\x2d' + chr(2192 - 2136)))(roI3spqORKae(ES5oEprVxulp(b'W\xf8\xbfZ\x14\xfe\xf9s=\xc8\xca'), chr(100) + chr(0b1100101) + chr(99) + chr(111) + '\144' + chr(0b11010 + 0o113))(chr(117) + '\x74' + chr(0b10111 + 0o117) + chr(45) + chr(0b1 + 0o67))) or roI3spqORKae(S6EI_gyMl2nC, roI3spqORKae(ES5oEprVxulp(b'\t\xa1\xa8M\x12\xef\xe1i \xd4'), '\144' + chr(0b1100101) + chr(0b1100011) + chr(111) + chr(5690 - 5590) + chr(0b1100101))('\x75' + '\164' + chr(3814 - 3712) + chr(0b101101) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'W\xa3'), '\144' + chr(0b1100101) + chr(0b100001 + 0o102) + chr(111) + chr(100) + '\x65')(chr(0b1101001 + 0o14) + chr(0b1110011 + 0o1) + chr(102) + chr(0b101101) + chr(0b100001 + 0o27))) or roI3spqORKae(S6EI_gyMl2nC, roI3spqORKae(ES5oEprVxulp(b'\t\xa1\xa8M\x12\xef\xe1i \xd4'), chr(7171 - 7071) + '\x65' + chr(99) + '\x6f' + chr(0b100001 + 0o103) + chr(6220 - 6119))(chr(0b1110101) + chr(0b1011 + 0o151) + chr(0b1100110) + '\055' + chr(1105 - 1049)))(roI3spqORKae(ES5oEprVxulp(b'W\xf8\xbfZ\x14\xfe\xf9s1'), chr(100) + '\145' + chr(99) + chr(2250 - 2139) + chr(0b1100100) + '\145')(chr(7714 - 7597) + chr(116) + chr(102) + chr(45) + '\x38')) or roI3spqORKae(S6EI_gyMl2nC, roI3spqORKae(ES5oEprVxulp(b'\t\xa1\xa8M\x12\xef\xe1i \xd4'), chr(0b1100100) + chr(0b1011010 + 0o13) + chr(0b1001000 + 0o33) + chr(111) + '\x64' + chr(0b11000 + 0o115))(chr(0b1110101) + chr(0b110100 + 0o100) + '\146' + chr(1941 - 1896) + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'W\xa4'), chr(100) + chr(101) + '\143' + chr(4427 - 4316) + chr(0b1100100) + '\145')(chr(0b1110101 + 0o0) + chr(0b1110100) + chr(102) + chr(0b10 + 0o53) + chr(0b111000))) or roI3spqORKae(S6EI_gyMl2nC, roI3spqORKae(ES5oEprVxulp(b'\t\xa1\xa8M\x12\xef\xe1i \xd4'), chr(100) + chr(0b1010110 + 0o17) + chr(99) + chr(0b1101111) + '\144' + '\145')(chr(4337 - 4220) + '\164' + chr(102) + '\055' + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'W\xf8\xb8J\x0f\xf9\xe2'), chr(0b1100100) + '\145' + '\x63' + chr(0b1101111) + chr(0b10 + 0o142) + chr(3445 - 3344))(chr(0b1110101) + chr(0b101110 + 0o106) + chr(0b1100110) + chr(45) + '\070')) if obglt5Iuxtj3: gyPTZcbjLCoJ = None else: roI3spqORKae(KEqfAnEnIXIO, roI3spqORKae(ES5oEprVxulp(b'\x1d\xbc\xbd`\x0f\xf2\xe5t5\xd0\xdf[\x88'), chr(0b1000110 + 0o36) + chr(0b1100101) + chr(99) + '\x6f' + '\144' + '\145')('\x75' + chr(116) + '\x66' + chr(0b101101) + chr(0b111000)))() gyPTZcbjLCoJ = KEqfAnEnIXIO.probe_git() if yR6CsKhX9PvC: if gyPTZcbjLCoJ is not None: if y87dwGy_Qoj4 is None: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x19\xa7\xa0K\x0f\xff\xf7l'), chr(0b1100100) + chr(101) + chr(0b1100011) + '\157' + chr(0b1100100) + chr(0b1100101))(chr(0b1110101) + chr(116) + chr(0b1100110) + chr(0b101101) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'-\xba\xbbT\x0f\xf2\xf1 #\xd5\xc7V\xcc\x07\x0eta\xba\xcf\xa8\xcc\xc2\xcd\n\xab\xb4U\xb7\x89\xc6;Yr\xc4mGz\xd6\xfc1\x08\xb4\xaeZF\xf0\xf9c5\xc8\xdaQ\x82H'), chr(0b1100100) + chr(0b111011 + 0o52) + chr(0b1100011) + chr(111) + chr(0b1100100) + chr(7037 - 6936))('\x75' + chr(116) + '\146' + '\055' + chr(0b111000))) roI3spqORKae(bpyfpu4kTbwL, roI3spqORKae(ES5oEprVxulp(b" \xa0\xbbU\x05\xc9\xda1'\xcf\xf2\x06"), chr(0b10 + 0o142) + '\145' + '\143' + chr(0b1101111) + chr(0b101010 + 0o72) + chr(0b1100101))('\x75' + chr(0b1110100) + chr(0b1100011 + 0o3) + '\055' + chr(0b100010 + 0o26)))(nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\061', 0b1000)) if not VF4pKOObtlPc((roI3spqORKae(AQ9ceR9AaoT1, roI3spqORKae(ES5oEprVxulp(b'\t\xa1\xa8M\x12\xef\xe1i \xd4'), chr(100) + chr(0b1001 + 0o134) + '\x63' + chr(0b11111 + 0o120) + chr(0b1100100) + chr(101))(chr(12249 - 12132) + chr(0b111011 + 0o71) + '\146' + chr(869 - 824) + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'W\xf8\xbd]'), chr(7403 - 7303) + '\x65' + chr(0b1100011) + '\x6f' + chr(0b11011 + 0o111) + chr(0b1100101))('\165' + '\164' + chr(0b101 + 0o141) + chr(0b101001 + 0o4) + chr(0b100101 + 0o23))) for AQ9ceR9AaoT1 in fb8WsB9zCZty)): fb8WsB9zCZty = [roI3spqORKae(ES5oEprVxulp(b'W\xf8\xbd]'), chr(2393 - 2293) + chr(0b1000110 + 0o37) + '\x63' + chr(0b100110 + 0o111) + '\x64' + '\x65')(chr(117) + '\x74' + chr(0b1100110) + '\x2d' + chr(0b1000 + 0o60)), roI3spqORKae(ES5oEprVxulp(b'\t\xbd\xa6M\x12'), chr(0b110011 + 0o61) + '\145' + chr(99) + '\x6f' + chr(0b1100100) + '\145')(chr(0b1110101) + '\x74' + chr(102) + chr(64 - 19) + chr(0b111000))] + fb8WsB9zCZty if not VF4pKOObtlPc((glQ0ASzL43Ag(AQ9ceR9AaoT1) for AQ9ceR9AaoT1 in fb8WsB9zCZty)): roI3spqORKae(fb8WsB9zCZty, roI3spqORKae(ES5oEprVxulp(b'2\x81\x9a\x0b\x1e\xfb\xd1o>\xd3\xe6\x0b'), chr(100) + '\145' + '\x63' + '\157' + chr(9336 - 9236) + '\x65')(chr(0b11 + 0o162) + chr(0b1111 + 0o145) + '\146' + chr(0b11110 + 0o17) + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'W\xa3\xbf'), chr(0b1100100 + 0o0) + '\145' + chr(99) + chr(0b11111 + 0o120) + chr(0b1100100) + chr(0b101101 + 0o70))(chr(0b1001111 + 0o46) + '\x74' + '\x66' + chr(696 - 651) + chr(0b111000))) if V_r3L4igrzbs and gyPTZcbjLCoJ is not None: An6zT8UjKIsO = gyPTZcbjLCoJ.head.An6zT8UjKIsO if not baWGo3LWcl1Y(KW0sEfjlgNpM, An6zT8UjKIsO): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x13\xad\x87G_\xd0\xe1_e\xdb\xc1q'), chr(0b110 + 0o136) + chr(0b111001 + 0o54) + chr(0b1100000 + 0o3) + chr(111) + chr(0b1111 + 0o125) + chr(9158 - 9057))('\165' + chr(116) + chr(102) + '\055' + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'.\xbd\xac\x1f\x0b\xf3\xf2e8\x9c\xc4_\x9fF@ip\xea\xcd\xb4\xc1\xdf\xc4\x11\xb7\xf0\x07\xbb\x96\x931Dz\xda$Rz\x82\xad-]\xfb\xe9l\r\xf5\xe6p=\xd2\xd4\x10'), chr(0b1011000 + 0o14) + '\x65' + chr(0b1100011) + chr(0b1010011 + 0o34) + '\x64' + chr(0b1100101))(chr(117) + chr(0b11100 + 0o130) + chr(0b11011 + 0o113) + '\x2d' + chr(56)), roI3spqORKae(An6zT8UjKIsO, roI3spqORKae(ES5oEprVxulp(b'0\xba\xf9\x0b\x03\xd7\xd1g<\xd4\x8aW'), chr(2200 - 2100) + chr(0b101001 + 0o74) + '\x63' + '\157' + chr(100) + '\145')('\165' + chr(3621 - 3505) + chr(102) + chr(0b11101 + 0o20) + chr(0b110 + 0o62)))) roI3spqORKae(bpyfpu4kTbwL, roI3spqORKae(ES5oEprVxulp(b" \xa0\xbbU\x05\xc9\xda1'\xcf\xf2\x06"), chr(100) + chr(101) + chr(99) + chr(0b1101111) + chr(0b1100100) + chr(101))(chr(0b11110 + 0o127) + chr(3061 - 2945) + chr(3022 - 2920) + chr(0b111 + 0o46) + '\x38'))(nzTpIcepk0o8(chr(0b110000) + chr(0b1000101 + 0o52) + chr(48), 8)) roI3spqORKae(fb8WsB9zCZty, roI3spqORKae(ES5oEprVxulp(b'.\x8a\xfar\t\xf8\xdaW\x0b\xfe\xd1O'), '\144' + chr(0b1001000 + 0o35) + chr(99) + '\x6f' + '\144' + chr(0b1100101))(chr(0b101111 + 0o106) + chr(11210 - 11094) + chr(6213 - 6111) + chr(519 - 474) + chr(0b111000)))(cMU2RmUmpVIt) (KW0sEfjlgNpM, mUIFVS9BWttT, cs_JYvA6rYIB) = Zy5jC95Ko39c.validate_model(KW0sEfjlgNpM) if KW0sEfjlgNpM is None: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x19\xa7\xa0K\x0f\xff\xf7l'), chr(0b1100100) + chr(101) + '\143' + chr(1344 - 1233) + '\x64' + '\x65')('\165' + '\x74' + '\x66' + chr(1696 - 1651) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'.\xbd\xac\x1f\x0b\xf3\xf2e8\x9c\xd0Q\x99\nJ&j\xa5\xd4\xfb\xc7\xd3\x82\x14\xbd\xf5C\xb7\x9c\x936^r\x979Iz\xd1\xe0;Z\xb3\xa6S\n\xf3\xe1i:\xdb\x93m\xae+b&a\xb8\xd2\xb4\xd7\xc5\x8c'), chr(100) + '\145' + chr(9144 - 9045) + chr(0b10110 + 0o131) + '\x64' + chr(8455 - 8354))(chr(3488 - 3371) + chr(116) + chr(0b11 + 0o143) + '\055' + chr(56))) aNllyZ4c8iCJ(cs_JYvA6rYIB) roI3spqORKae(bpyfpu4kTbwL, roI3spqORKae(ES5oEprVxulp(b" \xa0\xbbU\x05\xc9\xda1'\xcf\xf2\x06"), chr(6517 - 6417) + '\x65' + chr(2702 - 2603) + chr(0b111110 + 0o61) + chr(1582 - 1482) + '\x65')('\x75' + chr(116) + chr(102) + '\055' + '\x38'))(nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110001), 8)) KW0sEfjlgNpM.P4Y_Z4y10OvJ = P4Y_Z4y10OvJ if R_JAyWYiYGgX is not None: roI3spqORKae(R_JAyWYiYGgX, roI3spqORKae(ES5oEprVxulp(b' \x90\x9bL\x02\xff\xa1ce\xd8\x8b{'), '\144' + '\145' + chr(8339 - 8240) + chr(10360 - 10249) + '\144' + chr(101))(chr(117) + chr(0b1001110 + 0o46) + chr(0b101110 + 0o70) + chr(0b101101) + chr(0b111000)))(KW0sEfjlgNpM) (MJEGgvK3nnE9, POx95m7SPOVy) = Zy5jC95Ko39c.test_model(model=KW0sEfjlgNpM, sbml_version=mUIFVS9BWttT, results=nzTpIcepk0o8(chr(0b100011 + 0o15) + chr(0b11000 + 0o127) + chr(1099 - 1050), 8), pytest_args=fb8WsB9zCZty, skip=mi8KHiEXG5cT, exclusive=ZE_mm5xfJV8I, experimental=R_JAyWYiYGgX) if yR6CsKhX9PvC: if gyPTZcbjLCoJ is None: NqPKKcV10I_R = s0O2mNN6XTTa() roI3spqORKae(NqPKKcV10I_R, roI3spqORKae(ES5oEprVxulp(b'#\xa2\xba\r\r\xc6\xf5d9\xdf\xd7|'), chr(0b1100100) + '\145' + '\143' + chr(111) + chr(0b1001100 + 0o30) + '\x65')(chr(117) + chr(0b111010 + 0o72) + '\146' + '\055' + chr(56)))(POx95m7SPOVy, filename=FxZHtXEolYsL) else: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x13\xad\x87G_\xd0\xe1_e\xdb\xc1q'), chr(0b1100100) + chr(109 - 8) + '\143' + chr(0b1101111) + '\144' + chr(1257 - 1156))('\x75' + chr(116) + chr(0b1100110) + chr(0b101 + 0o50) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'9\xbd\xac\\\r\xf5\xf8gt\xd3\xc6J\xcc\x02Kvh\xa5\xd9\xb6\xc0\xd8\xd6X\xb0\xe6F\xbc\x9b\xdb|'), '\144' + chr(5710 - 5609) + chr(0b1100011) + chr(0b1011101 + 0o22) + chr(9156 - 9056) + chr(101))(chr(0b1110001 + 0o4) + chr(0b1110100) + chr(102) + '\x2d' + chr(56))) try: aAI4kJZu3Qcx = gyPTZcbjLCoJ.active_branch Xdoeb8Xel9de = aAI4kJZu3Qcx.An6zT8UjKIsO m1SnxnGPMGOj = nzTpIcepk0o8('\060' + '\157' + '\061', 8) except jZIjKu8IFANs: Xdoeb8Xel9de = gyPTZcbjLCoJ.head.An6zT8UjKIsO m1SnxnGPMGOj = nzTpIcepk0o8(chr(130 - 82) + chr(0b1101111) + chr(0b110000), 8) roI3spqORKae(gyPTZcbjLCoJ.git, roI3spqORKae(ES5oEprVxulp(b'\x19\xbd\xac\\\r\xf3\xe3t'), chr(100) + '\x65' + chr(0b10111 + 0o114) + '\157' + '\x64' + chr(0b101100 + 0o71))(chr(4562 - 4445) + chr(0b1110100) + '\x66' + '\055' + chr(858 - 802)))(WmHBd5brnc0m) try: NqPKKcV10I_R = OdTJ9Wxe7i3g(repository=gyPTZcbjLCoJ, location=y87dwGy_Qoj4) except (bIsJhlpYrrU2, oeMSriNv3aLx): NqPKKcV10I_R = WOV5KMB857JH(repository=gyPTZcbjLCoJ, location=y87dwGy_Qoj4) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x13\xad\x87G_\xd0\xe1_e\xdb\xc1q'), chr(0b101010 + 0o72) + '\145' + chr(0b100101 + 0o76) + chr(6153 - 6042) + chr(0b1100100) + '\145')(chr(9865 - 9748) + '\x74' + chr(102) + chr(1933 - 1888) + chr(0b1000 + 0o60)))(roI3spqORKae(ES5oEprVxulp(b'9\xba\xa4R\x0f\xe8\xe2i:\xdb\x93L\x89\x15[jp\xea\xc1\xb5\xc1\x96\xc1\x10\xb3\xfa@\xbb\x96\xd4rIv\xd4&\x06.\xca\xa8)\x15\xa7\xa2V\x08\xfb\xb6b&\xdd\xdd]\x84H'), '\144' + chr(0b1001010 + 0o33) + '\143' + chr(111) + '\x64' + '\145')(chr(0b1000010 + 0o63) + '\164' + chr(8464 - 8362) + chr(45) + '\070')) roI3spqORKae(NqPKKcV10I_R, roI3spqORKae(ES5oEprVxulp(b'#\xa2\xba\r\r\xc6\xf5d9\xdf\xd7|'), chr(7924 - 7824) + '\x65' + '\x63' + '\157' + chr(2157 - 2057) + chr(0b1100101))(chr(117) + chr(7975 - 7859) + chr(5352 - 5250) + '\x2d' + chr(56)))(POx95m7SPOVy, commit=roI3spqORKae(Xdoeb8Xel9de, roI3spqORKae(ES5oEprVxulp(b'0\xba\xf9\x0b\x03\xd7\xd1g<\xd4\x8aW'), chr(0b10100 + 0o120) + '\x65' + chr(0b1100011) + chr(1592 - 1481) + chr(100) + chr(101))(chr(6985 - 6868) + '\x74' + chr(0b1100110) + chr(0b10011 + 0o32) + '\070'))) roI3spqORKae(gyPTZcbjLCoJ.git, roI3spqORKae(ES5oEprVxulp(b'\x0f\xe6\x98[\x0f\xef\xdfq\x10\xda\xf0Z'), '\x64' + '\x65' + chr(0b110010 + 0o61) + chr(0b1101111) + '\x64' + chr(0b1100101))(chr(117) + chr(116) + chr(0b1000001 + 0o45) + chr(45) + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'T'), chr(0b1000110 + 0o36) + '\x65' + chr(0b1100011) + chr(0b1101111) + chr(2709 - 2609) + '\145')(chr(117) + '\164' + chr(102) + chr(0b101101) + '\070')) xCHVHRKFqLxl([roI3spqORKae(ES5oEprVxulp(b'\x1d\xbc\xbd'), '\x64' + chr(0b1100101) + chr(8235 - 8136) + chr(0b1101111) + chr(0b1100100) + chr(2018 - 1917))(chr(0b1110101) + '\164' + chr(0b1011001 + 0o15) + chr(701 - 656) + chr(1516 - 1460)), roI3spqORKae(ES5oEprVxulp(b'\x19\xba\xa4R\x0f\xe8'), chr(0b1100100) + chr(8564 - 8463) + chr(1593 - 1494) + '\157' + '\144' + chr(0b1100101))(chr(117) + chr(0b1110100) + chr(102) + chr(45) + chr(0b1010 + 0o56)), roI3spqORKae(ES5oEprVxulp(b'W\xb8'), chr(0b1010111 + 0o15) + chr(101) + chr(165 - 66) + chr(3992 - 3881) + '\144' + '\145')('\x75' + '\164' + chr(2942 - 2840) + chr(1935 - 1890) + chr(56)), roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'\x19\xbd\xa6M\x03\xa6\xb6a0\xd8\x93L\x89\x15[jp\xea\xc6\xb4\xd7\x96\xd9\x05'), chr(4364 - 4264) + chr(0b1011000 + 0o15) + '\143' + chr(1012 - 901) + chr(0b1100100) + chr(101))(chr(117) + '\x74' + '\x66' + '\x2d' + chr(0b1011 + 0o55)), roI3spqORKae(ES5oEprVxulp(b'\x0b\xe6\xfat!\xaf\xf0o\x05\xe3\xf0t'), chr(5770 - 5670) + chr(0b1100101) + chr(99) + '\157' + chr(0b1100100) + chr(0b1100101))(chr(117) + '\x74' + '\x66' + '\055' + '\070'))(roI3spqORKae(Xdoeb8Xel9de, roI3spqORKae(ES5oEprVxulp(b'0\xba\xf9\x0b\x03\xd7\xd1g<\xd4\x8aW'), chr(0b1100100) + chr(101) + chr(6069 - 5970) + '\157' + chr(0b11010 + 0o112) + '\145')(chr(0b1110101) + '\164' + chr(102) + '\055' + chr(2541 - 2485))))]) if m1SnxnGPMGOj: roI3spqORKae(aAI4kJZu3Qcx, roI3spqORKae(ES5oEprVxulp(b'\x19\xbd\xac\\\r\xf3\xe3t'), chr(3691 - 3591) + '\x65' + '\143' + chr(9289 - 9178) + chr(0b1100100) + chr(0b1100101))('\x75' + chr(116) + chr(0b1100110) + chr(0b101101) + chr(56)))() else: roI3spqORKae(gyPTZcbjLCoJ, roI3spqORKae(ES5oEprVxulp(b';\xbb\xffE2\xa4\xc3j\x1f\xf5\xc0q'), chr(615 - 515) + chr(101) + chr(99) + '\157' + chr(0b1100100) + '\x65')(chr(9214 - 9097) + chr(116) + chr(102) + chr(0b101101) + '\x38'))(Xdoeb8Xel9de)
opencobra/memote
memote/suite/cli/runner.py
new
def new(directory, replay): """ Create a suitable model repository structure from a template. By using a cookiecutter template, memote will ask you a couple of questions and set up a new directory structure that will make your life easier. The new directory will be placed in the current directory or respect the given --directory option. """ callbacks.git_installed() if directory is None: directory = os.getcwd() cookiecutter("gh:opencobra/cookiecutter-memote", output_dir=directory, replay=replay)
python
def new(directory, replay): """ Create a suitable model repository structure from a template. By using a cookiecutter template, memote will ask you a couple of questions and set up a new directory structure that will make your life easier. The new directory will be placed in the current directory or respect the given --directory option. """ callbacks.git_installed() if directory is None: directory = os.getcwd() cookiecutter("gh:opencobra/cookiecutter-memote", output_dir=directory, replay=replay)
[ "def", "new", "(", "directory", ",", "replay", ")", ":", "callbacks", ".", "git_installed", "(", ")", "if", "directory", "is", "None", ":", "directory", "=", "os", ".", "getcwd", "(", ")", "cookiecutter", "(", "\"gh:opencobra/cookiecutter-memote\"", ",", "output_dir", "=", "directory", ",", "replay", "=", "replay", ")" ]
Create a suitable model repository structure from a template. By using a cookiecutter template, memote will ask you a couple of questions and set up a new directory structure that will make your life easier. The new directory will be placed in the current directory or respect the given --directory option.
[ "Create", "a", "suitable", "model", "repository", "structure", "from", "a", "template", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/cli/runner.py#L236-L250
train
Create a new model repository structure from a template.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + '\157' + '\063' + chr(136 - 83) + chr(0b11010 + 0o33), 64673 - 64665), nzTpIcepk0o8('\x30' + '\157' + chr(0b1 + 0o62) + '\x31', ord("\x08")), nzTpIcepk0o8(chr(0b11100 + 0o24) + '\x6f' + chr(49) + '\062' + '\061', 54336 - 54328), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\063' + '\x30' + chr(52), 0b1000), nzTpIcepk0o8('\060' + chr(3962 - 3851) + chr(49) + chr(264 - 212) + chr(0b10 + 0o64), 9614 - 9606), nzTpIcepk0o8(chr(2228 - 2180) + chr(0b111 + 0o150) + chr(0b11111 + 0o22) + chr(53) + chr(1176 - 1121), 53613 - 53605), nzTpIcepk0o8(chr(0b10010 + 0o36) + '\157' + '\x35' + chr(1478 - 1423), ord("\x08")), nzTpIcepk0o8('\x30' + chr(6661 - 6550) + chr(0b100 + 0o55) + chr(2003 - 1949) + '\061', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\061' + '\061' + chr(50), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b110000 + 0o77) + chr(654 - 601) + '\060', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1010111 + 0o30) + '\065' + '\064', 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b110011) + chr(0b101000 + 0o10) + chr(0b110101), 0o10), nzTpIcepk0o8(chr(1761 - 1713) + chr(4938 - 4827) + chr(0b11110 + 0o24) + '\060' + chr(0b100 + 0o61), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110011) + '\061' + '\x33', 0b1000), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(0b1101111) + '\x31' + '\x32' + '\066', 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b100110 + 0o14) + '\060' + chr(49), 0b1000), nzTpIcepk0o8(chr(0b101 + 0o53) + chr(0b1000100 + 0o53) + chr(0b110010) + chr(0b110111) + '\065', 0o10), nzTpIcepk0o8(chr(0b110000 + 0o0) + '\x6f' + chr(0b101 + 0o55) + chr(0b11111 + 0o27) + chr(53), 61112 - 61104), nzTpIcepk0o8('\060' + chr(0b101011 + 0o104) + '\x30', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(4989 - 4878) + chr(0b110001) + '\067' + chr(0b11011 + 0o34), 0b1000), nzTpIcepk0o8(chr(0b10 + 0o56) + '\157' + chr(0b110011) + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(0b11010 + 0o26) + '\157' + chr(0b110010) + chr(0b1011 + 0o50) + '\x37', 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(2179 - 2128) + chr(52) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(48) + chr(0b100111 + 0o110) + '\061' + chr(779 - 729), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(4120 - 4009) + chr(1012 - 961) + chr(0b110101) + '\066', 0o10), nzTpIcepk0o8(chr(315 - 267) + '\x6f' + '\061' + chr(0b110001) + chr(0b110111), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b100011 + 0o16) + chr(0b1101 + 0o47) + chr(55), 4066 - 4058), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(3686 - 3575) + chr(51) + chr(0b11 + 0o63) + '\066', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1100 + 0o143) + chr(52) + chr(0b11100 + 0o31), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x36' + chr(0b110001), 35895 - 35887), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(111) + chr(346 - 295) + chr(0b11000 + 0o33) + chr(1244 - 1191), 0o10), nzTpIcepk0o8(chr(958 - 910) + chr(7455 - 7344) + chr(316 - 266) + chr(0b110001) + '\x32', 32187 - 32179), nzTpIcepk0o8(chr(0b101010 + 0o6) + '\x6f' + '\061' + chr(51) + chr(2463 - 2409), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(10637 - 10526) + '\x32' + chr(50) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(0b10 + 0o56) + chr(111) + '\067' + '\x32', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1100000 + 0o17) + chr(49) + '\x34', 26122 - 26114), nzTpIcepk0o8('\060' + '\x6f' + '\x32' + chr(52) + '\066', 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(1696 - 1645) + '\x32' + '\x33', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110011) + chr(0b110100) + '\065', 43196 - 43188), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110011) + '\x30' + chr(51), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b101000 + 0o107) + chr(0b110101) + '\060', 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xc3'), '\144' + '\x65' + chr(5593 - 5494) + '\157' + chr(0b1100 + 0o130) + '\x65')(chr(11294 - 11177) + '\164' + chr(0b1100110) + chr(0b10100 + 0o31) + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def bZWmgf4GjgvH(InVoWQwNBeGF, skrq1J8ubzai): roI3spqORKae(KEqfAnEnIXIO, roI3spqORKae(ES5oEprVxulp(b'\x8ap%\x9b\x0f\x01\\\x05+D@\xa0\xe1'), chr(0b1000110 + 0o36) + '\x65' + chr(99) + chr(111) + chr(100) + '\x65')('\165' + chr(0b1110100) + '\146' + '\055' + '\x38'))() if InVoWQwNBeGF is None: InVoWQwNBeGF = aHUqKstZLeS6.getcwd() dxjgwbR2QP5z(roI3spqORKae(ES5oEprVxulp(b'\x8aqk\xab\x16\nA\x12%J^\xa4\xaa\xa89\xee\xd6\xdce\x1cj\xeb\x93o\x9cb\n\x93H^\xa9\xef'), chr(9759 - 9659) + chr(0b1100100 + 0o1) + chr(99) + chr(0b1101111) + chr(7886 - 7786) + '\145')(chr(0b1111 + 0o146) + chr(0b1110100) + chr(102) + '\055' + chr(1862 - 1806)), output_dir=InVoWQwNBeGF, replay=skrq1J8ubzai)
opencobra/memote
memote/suite/cli/runner.py
history
def history(model, message, rewrite, solver, location, pytest_args, deployment, commits, skip, exclusive, experimental=None): # noqa: D301 """ Re-compute test results for the git branch history. MODEL is the path to the model file. MESSAGE is a commit message in case results were modified or added. [COMMIT] ... It is possible to list out individual commits that should be re-computed or supply a range <oldest commit>..<newest commit>, for example, memote history model.xml "chore: re-compute history" 6b84d05..cd49c85 There are two distinct modes: \b 1. Completely re-compute test results for each commit in the git history. This should only be necessary when memote is first used with existing model repositories. 2. By giving memote specific commit hashes, it will re-compute test results for those only. This can also be achieved by supplying a commit range. """ # callbacks.validate_path(model) callbacks.git_installed() if location is None: raise click.BadParameter("No 'location' given or configured.") if "--tb" not in pytest_args: pytest_args = ["--tb", "no"] + pytest_args try: LOGGER.info("Identifying git repository!") repo = git.Repo() except git.InvalidGitRepositoryError: LOGGER.critical( "The history requires a git repository in order to follow " "the model's commit history.") sys.exit(1) else: LOGGER.info("Success!") previous = repo.active_branch LOGGER.info("Checking out deployment branch {}.".format(deployment)) repo.git.checkout(deployment) # Temporarily move the results to a new location so that they are # available while checking out the various commits. engine = None tmp_location = mkdtemp() try: # Test if the location can be opened as a database. engine = create_engine(location) engine.dispose() new_location = location if location.startswith("sqlite"): # Copy the SQLite database to a temporary location. Other # databases are not file-based and thus git independent. url = location.split("/", maxsplit=3) if isfile(url[3]): copy2(url[3], tmp_location) new_location = "{}/{}".format( "/".join(url[:3] + [tmp_location]), url[3]) LOGGER.info("Temporarily moving database from '%s' to '%s'.", url[3], join(tmp_location, url[3])) manager = SQLResultManager(repository=repo, location=new_location) except (AttributeError, ArgumentError): LOGGER.info("Temporarily moving results from '%s' to '%s'.", location, tmp_location) move(location, tmp_location) new_location = join(tmp_location, location) manager = RepoResultManager(repository=repo, location=new_location) LOGGER.info("Recomputing result history!") history = HistoryManager(repository=repo, manager=manager) history.load_history(model, skip={deployment}) if len(commits) == 0: commits = list(history.iter_commits()) elif len(commits) == 1 and ".." in commits[0]: commits = repo.git.rev_list(commits[0]).split(os.linesep) for commit in commits: cmt = repo.commit(commit) # Rewrite to full length hexsha. commit = cmt.hexsha if not is_modified(model, cmt): LOGGER.info( "The model was not modified in commit '{}'. " "Skipping.".format(commit)) continue # Should we overwrite an existing result? if commit in history and not rewrite: LOGGER.info( "Result for commit '{}' exists. Skipping.".format(commit)) continue LOGGER.info( "Running the test suite for commit '{}'.".format(commit)) blob = cmt.tree[model] model_obj, sbml_ver, notifications = _model_from_stream( blob.data_stream, blob.name ) if model_obj is None: LOGGER.critical("The model could not be loaded due to the " "following SBML errors.") stdout_notifications(notifications) continue proc = Process( target=_test_history, args=(model_obj, sbml_ver, solver, manager, commit, pytest_args, skip, exclusive, experimental)) proc.start() proc.join() LOGGER.info("Finished recomputing!") # Copy back all new and modified files and add them to the index. LOGGER.info("Committing recomputed results!") repo.git.checkout(deployment) if engine is not None: manager.session.close() if location.startswith("sqlite"): copy2(join(tmp_location, url[3]), url[3]) else: move(new_location, os.getcwd()) repo.git.add(".") check_call(['git', 'commit', '-m', message]) LOGGER.info("Success!") # Checkout the original branch. previous.checkout() LOGGER.info("Done.")
python
def history(model, message, rewrite, solver, location, pytest_args, deployment, commits, skip, exclusive, experimental=None): # noqa: D301 """ Re-compute test results for the git branch history. MODEL is the path to the model file. MESSAGE is a commit message in case results were modified or added. [COMMIT] ... It is possible to list out individual commits that should be re-computed or supply a range <oldest commit>..<newest commit>, for example, memote history model.xml "chore: re-compute history" 6b84d05..cd49c85 There are two distinct modes: \b 1. Completely re-compute test results for each commit in the git history. This should only be necessary when memote is first used with existing model repositories. 2. By giving memote specific commit hashes, it will re-compute test results for those only. This can also be achieved by supplying a commit range. """ # callbacks.validate_path(model) callbacks.git_installed() if location is None: raise click.BadParameter("No 'location' given or configured.") if "--tb" not in pytest_args: pytest_args = ["--tb", "no"] + pytest_args try: LOGGER.info("Identifying git repository!") repo = git.Repo() except git.InvalidGitRepositoryError: LOGGER.critical( "The history requires a git repository in order to follow " "the model's commit history.") sys.exit(1) else: LOGGER.info("Success!") previous = repo.active_branch LOGGER.info("Checking out deployment branch {}.".format(deployment)) repo.git.checkout(deployment) # Temporarily move the results to a new location so that they are # available while checking out the various commits. engine = None tmp_location = mkdtemp() try: # Test if the location can be opened as a database. engine = create_engine(location) engine.dispose() new_location = location if location.startswith("sqlite"): # Copy the SQLite database to a temporary location. Other # databases are not file-based and thus git independent. url = location.split("/", maxsplit=3) if isfile(url[3]): copy2(url[3], tmp_location) new_location = "{}/{}".format( "/".join(url[:3] + [tmp_location]), url[3]) LOGGER.info("Temporarily moving database from '%s' to '%s'.", url[3], join(tmp_location, url[3])) manager = SQLResultManager(repository=repo, location=new_location) except (AttributeError, ArgumentError): LOGGER.info("Temporarily moving results from '%s' to '%s'.", location, tmp_location) move(location, tmp_location) new_location = join(tmp_location, location) manager = RepoResultManager(repository=repo, location=new_location) LOGGER.info("Recomputing result history!") history = HistoryManager(repository=repo, manager=manager) history.load_history(model, skip={deployment}) if len(commits) == 0: commits = list(history.iter_commits()) elif len(commits) == 1 and ".." in commits[0]: commits = repo.git.rev_list(commits[0]).split(os.linesep) for commit in commits: cmt = repo.commit(commit) # Rewrite to full length hexsha. commit = cmt.hexsha if not is_modified(model, cmt): LOGGER.info( "The model was not modified in commit '{}'. " "Skipping.".format(commit)) continue # Should we overwrite an existing result? if commit in history and not rewrite: LOGGER.info( "Result for commit '{}' exists. Skipping.".format(commit)) continue LOGGER.info( "Running the test suite for commit '{}'.".format(commit)) blob = cmt.tree[model] model_obj, sbml_ver, notifications = _model_from_stream( blob.data_stream, blob.name ) if model_obj is None: LOGGER.critical("The model could not be loaded due to the " "following SBML errors.") stdout_notifications(notifications) continue proc = Process( target=_test_history, args=(model_obj, sbml_ver, solver, manager, commit, pytest_args, skip, exclusive, experimental)) proc.start() proc.join() LOGGER.info("Finished recomputing!") # Copy back all new and modified files and add them to the index. LOGGER.info("Committing recomputed results!") repo.git.checkout(deployment) if engine is not None: manager.session.close() if location.startswith("sqlite"): copy2(join(tmp_location, url[3]), url[3]) else: move(new_location, os.getcwd()) repo.git.add(".") check_call(['git', 'commit', '-m', message]) LOGGER.info("Success!") # Checkout the original branch. previous.checkout() LOGGER.info("Done.")
[ "def", "history", "(", "model", ",", "message", ",", "rewrite", ",", "solver", ",", "location", ",", "pytest_args", ",", "deployment", ",", "commits", ",", "skip", ",", "exclusive", ",", "experimental", "=", "None", ")", ":", "# noqa: D301", "# callbacks.validate_path(model)", "callbacks", ".", "git_installed", "(", ")", "if", "location", "is", "None", ":", "raise", "click", ".", "BadParameter", "(", "\"No 'location' given or configured.\"", ")", "if", "\"--tb\"", "not", "in", "pytest_args", ":", "pytest_args", "=", "[", "\"--tb\"", ",", "\"no\"", "]", "+", "pytest_args", "try", ":", "LOGGER", ".", "info", "(", "\"Identifying git repository!\"", ")", "repo", "=", "git", ".", "Repo", "(", ")", "except", "git", ".", "InvalidGitRepositoryError", ":", "LOGGER", ".", "critical", "(", "\"The history requires a git repository in order to follow \"", "\"the model's commit history.\"", ")", "sys", ".", "exit", "(", "1", ")", "else", ":", "LOGGER", ".", "info", "(", "\"Success!\"", ")", "previous", "=", "repo", ".", "active_branch", "LOGGER", ".", "info", "(", "\"Checking out deployment branch {}.\"", ".", "format", "(", "deployment", ")", ")", "repo", ".", "git", ".", "checkout", "(", "deployment", ")", "# Temporarily move the results to a new location so that they are", "# available while checking out the various commits.", "engine", "=", "None", "tmp_location", "=", "mkdtemp", "(", ")", "try", ":", "# Test if the location can be opened as a database.", "engine", "=", "create_engine", "(", "location", ")", "engine", ".", "dispose", "(", ")", "new_location", "=", "location", "if", "location", ".", "startswith", "(", "\"sqlite\"", ")", ":", "# Copy the SQLite database to a temporary location. Other", "# databases are not file-based and thus git independent.", "url", "=", "location", ".", "split", "(", "\"/\"", ",", "maxsplit", "=", "3", ")", "if", "isfile", "(", "url", "[", "3", "]", ")", ":", "copy2", "(", "url", "[", "3", "]", ",", "tmp_location", ")", "new_location", "=", "\"{}/{}\"", ".", "format", "(", "\"/\"", ".", "join", "(", "url", "[", ":", "3", "]", "+", "[", "tmp_location", "]", ")", ",", "url", "[", "3", "]", ")", "LOGGER", ".", "info", "(", "\"Temporarily moving database from '%s' to '%s'.\"", ",", "url", "[", "3", "]", ",", "join", "(", "tmp_location", ",", "url", "[", "3", "]", ")", ")", "manager", "=", "SQLResultManager", "(", "repository", "=", "repo", ",", "location", "=", "new_location", ")", "except", "(", "AttributeError", ",", "ArgumentError", ")", ":", "LOGGER", ".", "info", "(", "\"Temporarily moving results from '%s' to '%s'.\"", ",", "location", ",", "tmp_location", ")", "move", "(", "location", ",", "tmp_location", ")", "new_location", "=", "join", "(", "tmp_location", ",", "location", ")", "manager", "=", "RepoResultManager", "(", "repository", "=", "repo", ",", "location", "=", "new_location", ")", "LOGGER", ".", "info", "(", "\"Recomputing result history!\"", ")", "history", "=", "HistoryManager", "(", "repository", "=", "repo", ",", "manager", "=", "manager", ")", "history", ".", "load_history", "(", "model", ",", "skip", "=", "{", "deployment", "}", ")", "if", "len", "(", "commits", ")", "==", "0", ":", "commits", "=", "list", "(", "history", ".", "iter_commits", "(", ")", ")", "elif", "len", "(", "commits", ")", "==", "1", "and", "\"..\"", "in", "commits", "[", "0", "]", ":", "commits", "=", "repo", ".", "git", ".", "rev_list", "(", "commits", "[", "0", "]", ")", ".", "split", "(", "os", ".", "linesep", ")", "for", "commit", "in", "commits", ":", "cmt", "=", "repo", ".", "commit", "(", "commit", ")", "# Rewrite to full length hexsha.", "commit", "=", "cmt", ".", "hexsha", "if", "not", "is_modified", "(", "model", ",", "cmt", ")", ":", "LOGGER", ".", "info", "(", "\"The model was not modified in commit '{}'. \"", "\"Skipping.\"", ".", "format", "(", "commit", ")", ")", "continue", "# Should we overwrite an existing result?", "if", "commit", "in", "history", "and", "not", "rewrite", ":", "LOGGER", ".", "info", "(", "\"Result for commit '{}' exists. Skipping.\"", ".", "format", "(", "commit", ")", ")", "continue", "LOGGER", ".", "info", "(", "\"Running the test suite for commit '{}'.\"", ".", "format", "(", "commit", ")", ")", "blob", "=", "cmt", ".", "tree", "[", "model", "]", "model_obj", ",", "sbml_ver", ",", "notifications", "=", "_model_from_stream", "(", "blob", ".", "data_stream", ",", "blob", ".", "name", ")", "if", "model_obj", "is", "None", ":", "LOGGER", ".", "critical", "(", "\"The model could not be loaded due to the \"", "\"following SBML errors.\"", ")", "stdout_notifications", "(", "notifications", ")", "continue", "proc", "=", "Process", "(", "target", "=", "_test_history", ",", "args", "=", "(", "model_obj", ",", "sbml_ver", ",", "solver", ",", "manager", ",", "commit", ",", "pytest_args", ",", "skip", ",", "exclusive", ",", "experimental", ")", ")", "proc", ".", "start", "(", ")", "proc", ".", "join", "(", ")", "LOGGER", ".", "info", "(", "\"Finished recomputing!\"", ")", "# Copy back all new and modified files and add them to the index.", "LOGGER", ".", "info", "(", "\"Committing recomputed results!\"", ")", "repo", ".", "git", ".", "checkout", "(", "deployment", ")", "if", "engine", "is", "not", "None", ":", "manager", ".", "session", ".", "close", "(", ")", "if", "location", ".", "startswith", "(", "\"sqlite\"", ")", ":", "copy2", "(", "join", "(", "tmp_location", ",", "url", "[", "3", "]", ")", ",", "url", "[", "3", "]", ")", "else", ":", "move", "(", "new_location", ",", "os", ".", "getcwd", "(", ")", ")", "repo", ".", "git", ".", "add", "(", "\".\"", ")", "check_call", "(", "[", "'git'", ",", "'commit'", ",", "'-m'", ",", "message", "]", ")", "LOGGER", ".", "info", "(", "\"Success!\"", ")", "# Checkout the original branch.", "previous", ".", "checkout", "(", ")", "LOGGER", ".", "info", "(", "\"Done.\"", ")" ]
Re-compute test results for the git branch history. MODEL is the path to the model file. MESSAGE is a commit message in case results were modified or added. [COMMIT] ... It is possible to list out individual commits that should be re-computed or supply a range <oldest commit>..<newest commit>, for example, memote history model.xml "chore: re-compute history" 6b84d05..cd49c85 There are two distinct modes: \b 1. Completely re-compute test results for each commit in the git history. This should only be necessary when memote is first used with existing model repositories. 2. By giving memote specific commit hashes, it will re-compute test results for those only. This can also be achieved by supplying a commit range.
[ "Re", "-", "compute", "test", "results", "for", "the", "git", "branch", "history", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/cli/runner.py#L307-L429
train
Re - compute test results for a specific model file.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(481 - 433) + '\x6f' + '\061', 0o10), nzTpIcepk0o8(chr(954 - 906) + chr(111) + chr(0b1111 + 0o44) + chr(49) + chr(0b110010 + 0o2), ord("\x08")), nzTpIcepk0o8(chr(651 - 603) + chr(111) + chr(53) + chr(2541 - 2486), 44945 - 44937), nzTpIcepk0o8(chr(48) + '\157' + '\x35' + chr(1728 - 1678), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x33' + chr(0b10011 + 0o35) + chr(0b1001 + 0o47), ord("\x08")), nzTpIcepk0o8(chr(0b11010 + 0o26) + '\157' + '\063' + '\063', 48502 - 48494), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b11010 + 0o34), 0o10), nzTpIcepk0o8(chr(2185 - 2137) + '\x6f' + '\x33' + chr(129 - 78) + chr(0b100000 + 0o20), ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\062' + chr(1307 - 1254) + chr(0b100110 + 0o13), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1001111 + 0o40) + chr(0b11011 + 0o34) + chr(59 - 11), 27564 - 27556), nzTpIcepk0o8('\060' + '\157' + '\063' + '\x33' + chr(2761 - 2707), 59448 - 59440), nzTpIcepk0o8(chr(0b110000) + chr(0b111000 + 0o67) + chr(0b101010 + 0o12) + '\061', 0b1000), nzTpIcepk0o8(chr(48) + chr(4243 - 4132) + chr(49) + chr(0b110010) + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(0b100110 + 0o12) + '\157' + chr(49) + chr(0b101111 + 0o7) + chr(0b110001), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(73 - 22) + '\x33' + chr(0b110010 + 0o3), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110010) + '\x34' + '\x35', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\061' + chr(0b110101) + '\x34', 0b1000), nzTpIcepk0o8(chr(48) + chr(9952 - 9841) + chr(49) + chr(589 - 539) + chr(49), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b11111 + 0o120) + '\061' + '\064' + chr(1406 - 1356), 0o10), nzTpIcepk0o8('\060' + chr(9084 - 8973) + '\x33' + chr(0b1101 + 0o45) + chr(2168 - 2119), 0b1000), nzTpIcepk0o8(chr(0b100011 + 0o15) + chr(0b1101111) + chr(2107 - 2057) + '\063', 26310 - 26302), nzTpIcepk0o8(chr(48) + '\157' + '\063' + '\x34' + '\x34', 0b1000), nzTpIcepk0o8(chr(48) + '\157' + '\062' + '\x31' + '\x36', 0b1000), nzTpIcepk0o8(chr(1742 - 1694) + chr(0b1100001 + 0o16) + '\064' + '\062', 0o10), nzTpIcepk0o8(chr(0b100000 + 0o20) + '\157' + chr(51) + '\064', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b101111 + 0o2) + '\x36' + chr(1588 - 1534), 0o10), nzTpIcepk0o8(chr(0b11101 + 0o23) + chr(0b1100011 + 0o14) + chr(51) + '\064' + chr(49), 0b1000), nzTpIcepk0o8('\060' + '\157' + '\062' + chr(854 - 804) + chr(340 - 292), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(51) + chr(0b101 + 0o57) + chr(2195 - 2143), 8), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\063' + chr(0b110011) + '\063', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\061' + '\066' + '\063', ord("\x08")), nzTpIcepk0o8(chr(1791 - 1743) + chr(0b1011010 + 0o25) + chr(0b11101 + 0o26) + '\060' + chr(0b100100 + 0o23), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1277 - 1227) + '\065' + '\060', 0b1000), nzTpIcepk0o8(chr(0b11011 + 0o25) + chr(0b101001 + 0o106) + '\063' + chr(51) + '\061', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(1647 - 1597) + chr(0b110011) + chr(0b110101), 1148 - 1140), nzTpIcepk0o8('\x30' + chr(0b10001 + 0o136) + chr(0b110011) + chr(48) + chr(1825 - 1774), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(1478 - 1367) + '\x32' + chr(0b110100) + chr(49), 0o10), nzTpIcepk0o8(chr(48) + chr(12188 - 12077) + chr(53) + '\064', 0o10), nzTpIcepk0o8(chr(465 - 417) + chr(0b1101111) + chr(50) + chr(324 - 276) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(1528 - 1480) + '\x6f' + chr(1655 - 1606) + '\067' + chr(0b1110 + 0o43), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b10011 + 0o35) + '\x6f' + chr(253 - 200) + '\x30', 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'/'), '\x64' + chr(101) + chr(99) + chr(11822 - 11711) + '\x64' + '\145')('\165' + '\x74' + chr(6576 - 6474) + chr(0b0 + 0o55) + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def v7fOR4wOhUN2(KW0sEfjlgNpM, FksNMH1w_ns6, DZK4sD19AMDv, P4Y_Z4y10OvJ, y87dwGy_Qoj4, fb8WsB9zCZty, WmHBd5brnc0m, dg9GdsJOXzDc, mi8KHiEXG5cT, ZE_mm5xfJV8I, R_JAyWYiYGgX=None): roI3spqORKae(KEqfAnEnIXIO, roI3spqORKae(ES5oEprVxulp(b'f\xa5[u\xa9uu\xac\xc8T\xb2D3'), chr(100) + '\145' + chr(99) + '\x6f' + '\144' + '\x65')(chr(6047 - 5930) + chr(116) + '\x66' + chr(0b101101) + chr(0b111000)))() if y87dwGy_Qoj4 is None: raise roI3spqORKae(uNNTJtNION1L, roI3spqORKae(ES5oEprVxulp(b'C\xadKz\xa1ig\xb5\xccL\xbbS'), '\x64' + '\145' + chr(1164 - 1065) + chr(0b1010 + 0o145) + chr(0b1100100) + chr(0b1100101))(chr(117) + chr(10294 - 10178) + '\x66' + chr(0b100011 + 0o12) + chr(2460 - 2404)))(roI3spqORKae(ES5oEprVxulp(b'O\xa3\x0f\r\xacte\xb9\xddQ\xb1OpQ\xba\xcc\x1a4\x0c\xf1|\x96\xaeAs\x18\x87\xf9\x83\xae\x01\xa2\xcc\xf7'), chr(0b1011110 + 0o6) + '\x65' + chr(0b1011001 + 0o12) + chr(0b1101111) + '\x64' + chr(101))('\165' + '\x74' + '\x66' + chr(566 - 521) + chr(0b11101 + 0o33))) if roI3spqORKae(ES5oEprVxulp(b',\xe1[H'), chr(0b1100100) + '\145' + '\x63' + chr(111) + chr(0b1100100) + chr(2694 - 2593))('\x75' + '\x74' + chr(0b1100110) + '\x2d' + chr(0b111000)) not in fb8WsB9zCZty: fb8WsB9zCZty = [roI3spqORKae(ES5oEprVxulp(b',\xe1[H'), chr(0b1011010 + 0o12) + chr(5161 - 5060) + '\x63' + chr(111) + chr(3053 - 2953) + chr(0b111 + 0o136))(chr(7179 - 7062) + chr(116) + '\x66' + chr(0b101000 + 0o5) + chr(56)), roI3spqORKae(ES5oEprVxulp(b'o\xa3'), chr(100) + chr(2279 - 2178) + chr(99) + '\157' + '\x64' + chr(101))('\165' + chr(0b1110100) + '\x66' + '\x2d' + '\x38')] + fb8WsB9zCZty try: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), chr(0b1100100) + chr(0b111001 + 0o54) + chr(0b1000010 + 0o41) + chr(111) + chr(0b1100100) + '\145')('\x75' + chr(0b1110100) + '\146' + '\055' + chr(2853 - 2797)))(roI3spqORKae(ES5oEprVxulp(b'H\xa8JD\xb4r`\xa1\xc0V\xb9\x010\x18\xa9\x85\x1e4\x12\xbe`\x8d\xfaMn\x0f\xc0'), chr(100) + chr(101) + chr(0b1100011) + chr(4275 - 4164) + chr(0b1100001 + 0o3) + chr(1640 - 1539))('\165' + chr(0b101101 + 0o107) + chr(2876 - 2774) + chr(45) + chr(56))) gyPTZcbjLCoJ = qSlwIbCC95rx.Repo() except roI3spqORKae(qSlwIbCC95rx, roI3spqORKae(ES5oEprVxulp(b"H\xa2YK\xacrb\x9f\xc0L\x8cD'\x1e\xae\xcc\x18>\x10\xa8V\x96\xfcMn"), chr(0b111010 + 0o52) + chr(0b100010 + 0o103) + chr(0b1100011) + chr(0b1001100 + 0o43) + chr(100) + chr(0b1000 + 0o135))(chr(0b100000 + 0o125) + chr(0b1000110 + 0o56) + chr(7985 - 7883) + chr(1942 - 1897) + chr(0b111000))): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'b\xbeF^\xa9xg\xb4'), chr(100) + chr(3199 - 3098) + '\143' + '\x6f' + chr(0b11000 + 0o114) + chr(101))('\x75' + '\164' + chr(0b1001110 + 0o30) + chr(45) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'U\xa4J\n\xa8ru\xac\xc6J\xa7\x01%\x14\xac\xd0\x05#\x07\xa23\x85\xaeEu\x02\xc1\xe2\x81\xab\x1c\xb4\xc1\xad\xf2\xb1\xd8\x0c\xea\x17!\xa3]N\xa5i&\xac\xc6\x18\xb8N;\x1d\xb2\xd2L%\n\xb43\x89\xe1Fy\x1a\xc6\xe3\xc4\xb8\x1c\xaa\xc5\xb0\xe9\xe3\xc9E\xf0\rn\xbeV\x04'), chr(488 - 388) + chr(7958 - 7857) + '\143' + chr(6346 - 6235) + chr(0b1001110 + 0o26) + chr(0b111011 + 0o52))(chr(0b1110101) + chr(116) + chr(102) + '\x2d' + '\x38')) roI3spqORKae(bpyfpu4kTbwL, roI3spqORKae(ES5oEprVxulp(b'[\xb9]@\xa3NJ\xe9\xdaK\x9f\x19'), '\144' + chr(0b0 + 0o145) + chr(99) + chr(1415 - 1304) + '\x64' + '\145')('\165' + chr(11027 - 10911) + chr(0b1000 + 0o136) + chr(45) + chr(0b0 + 0o70)))(nzTpIcepk0o8(chr(0b110000) + '\157' + chr(745 - 696), 8)) else: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), chr(0b1100001 + 0o3) + '\x65' + chr(5748 - 5649) + chr(0b1000 + 0o147) + '\x64' + chr(0b1100101))('\x75' + '\x74' + chr(2287 - 2185) + chr(45) + '\070'))(roI3spqORKae(ES5oEprVxulp(b'R\xb9LI\xa5hu\xf9'), '\x64' + chr(3528 - 3427) + chr(6057 - 5958) + '\157' + chr(2496 - 2396) + chr(0b110 + 0o137))('\x75' + '\x74' + chr(102) + chr(45) + '\x38')) aAI4kJZu3Qcx = gyPTZcbjLCoJ.active_branch roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), chr(100) + chr(0b1100101) + chr(99) + chr(0b11101 + 0o122) + chr(0b1100100) + chr(0b101000 + 0o75))('\165' + chr(116) + chr(102) + chr(45) + chr(0b111000)))(roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'B\xa4JI\xabrh\xbf\x89W\xabUw\x15\xb8\xd5\x00>\x1b\xbcv\x8a\xfa\x02~\x04\x80\xfe\x87\xb3S\xbc\xd5\xf7'), chr(0b10100 + 0o120) + '\145' + chr(0b1100011) + '\x6f' + '\x64' + chr(0b1100101))(chr(117) + '\x74' + '\x66' + chr(45) + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'p\xff\x1ca\x87(`\xb7\xf8g\x9dk'), chr(0b1100100) + chr(0b1100101) + '\x63' + chr(3013 - 2902) + '\x64' + '\x65')(chr(0b1110101) + '\164' + chr(0b1100110) + '\x2d' + chr(0b101101 + 0o13)))(WmHBd5brnc0m)) roI3spqORKae(gyPTZcbjLCoJ.git, roI3spqORKae(ES5oEprVxulp(b'b\xa4JI\xabts\xac'), chr(336 - 236) + chr(101) + '\x63' + '\x6f' + '\x64' + '\145')(chr(912 - 795) + chr(116) + '\x66' + chr(45) + chr(1909 - 1853)))(WmHBd5brnc0m) vIOBoq0tZNjV = None bEdY7STJTbqg = A2QOcbmb7Eto() try: vIOBoq0tZNjV = K129dMc1C31Z(y87dwGy_Qoj4) roI3spqORKae(vIOBoq0tZNjV, roI3spqORKae(ES5oEprVxulp(b'e\xa5\\Z\xafhc'), chr(100) + chr(101) + '\143' + chr(4163 - 4052) + chr(0b1100100) + chr(0b101 + 0o140))(chr(0b1110101) + chr(0b1110100) + '\146' + chr(45) + chr(0b11 + 0o65)))() x1n90_HXfps2 = y87dwGy_Qoj4 if roI3spqORKae(y87dwGy_Qoj4, roI3spqORKae(ES5oEprVxulp(b'r\xb8NX\xb4hq\xb1\xddP'), chr(0b1100100) + chr(1454 - 1353) + chr(0b110 + 0o135) + chr(111) + chr(6834 - 6734) + '\145')(chr(117) + chr(116) + '\146' + chr(45) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'r\xbdCC\xb4~'), chr(100) + '\x65' + chr(0b1100011) + '\157' + '\144' + chr(0b1100001 + 0o4))(chr(0b1110101) + chr(11972 - 11856) + chr(0b110110 + 0o60) + chr(1954 - 1909) + '\x38')): XuBkOpBKZJ5Z = y87dwGy_Qoj4.LfRrQOxuDvnC(roI3spqORKae(ES5oEprVxulp(b'.'), '\144' + '\145' + '\x63' + chr(0b1101111) + '\144' + chr(0b100011 + 0o102))(chr(117) + chr(0b1110100) + '\x66' + chr(0b101101) + chr(56)), maxsplit=nzTpIcepk0o8(chr(0b110000) + chr(10049 - 9938) + '\x33', ord("\x08"))) if T0dlItWR2VLQ(XuBkOpBKZJ5Z[nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x33', 8)]): WpHOHljqjCSL(XuBkOpBKZJ5Z[nzTpIcepk0o8(chr(1227 - 1179) + chr(0b1101111) + chr(1459 - 1408), 8)], bEdY7STJTbqg) x1n90_HXfps2 = roI3spqORKae(ES5oEprVxulp(b'z\xb1\x00Q\xbd'), chr(0b1010101 + 0o17) + chr(10173 - 10072) + '\x63' + chr(0b1101111) + '\144' + '\145')(chr(0b1011001 + 0o34) + '\x74' + chr(0b1100110) + '\x2d' + chr(56)).q33KG3foQ_CJ(roI3spqORKae(ES5oEprVxulp(b'.'), '\144' + chr(0b11000 + 0o115) + chr(0b1100011) + '\157' + chr(0b1100100) + '\x65')('\x75' + '\x74' + '\x66' + chr(0b101101) + '\x38').Y4yM9BcfTCNq(XuBkOpBKZJ5Z[:nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110011), 8)] + [bEdY7STJTbqg]), XuBkOpBKZJ5Z[nzTpIcepk0o8(chr(48) + '\157' + chr(0b1100 + 0o47), 8)]) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), '\x64' + chr(0b1100101) + '\x63' + '\x6f' + chr(0b111000 + 0o54) + chr(5484 - 5383))(chr(3162 - 3045) + chr(3974 - 3858) + '\146' + '\x2d' + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'U\xa9BZ\xafig\xaa\xc0T\xa7\x01:\x1e\xab\xcc\x026B\xb5r\x90\xef@}\x05\x84\xb0\x82\xa9\x1c\xaa\x88\xfe\xb8\xb0\x86\x0c\xf7\x16!\xeb\nY\xe75'), '\x64' + '\145' + chr(9005 - 8906) + chr(0b1010011 + 0o34) + chr(100) + chr(101))('\x75' + '\x74' + '\x66' + chr(0b101101) + chr(0b10111 + 0o41)), XuBkOpBKZJ5Z[nzTpIcepk0o8('\060' + chr(111) + '\063', 8)], Y4yM9BcfTCNq(bEdY7STJTbqg, XuBkOpBKZJ5Z[nzTpIcepk0o8(chr(0b110000) + '\157' + '\x33', 8)])) NqPKKcV10I_R = OdTJ9Wxe7i3g(repository=gyPTZcbjLCoJ, location=x1n90_HXfps2) except (bIsJhlpYrrU2, oeMSriNv3aLx): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), '\x64' + '\x65' + '\x63' + chr(11426 - 11315) + chr(100) + '\145')(chr(0b100 + 0o161) + chr(0b1110100) + chr(9990 - 9888) + chr(45) + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'U\xa9BZ\xafig\xaa\xc0T\xa7\x01:\x1e\xab\xcc\x026B\xa3v\x97\xfbNh\x05\xc1\xf6\x96\xb4\x1e\xe7\x8f\xfc\xee\xe4\x81X\xecY&\xe9\\\r\xee'), '\x64' + chr(0b1100101) + chr(3964 - 3865) + chr(2620 - 2509) + '\x64' + '\145')(chr(117) + chr(116) + chr(102) + chr(0b100000 + 0o15) + chr(0b111000)), y87dwGy_Qoj4, bEdY7STJTbqg) xd7THyEXxkz0(y87dwGy_Qoj4, bEdY7STJTbqg) x1n90_HXfps2 = Y4yM9BcfTCNq(bEdY7STJTbqg, y87dwGy_Qoj4) NqPKKcV10I_R = WOV5KMB857JH(repository=gyPTZcbjLCoJ, location=x1n90_HXfps2) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), chr(0b110111 + 0o55) + '\x65' + chr(3779 - 3680) + chr(585 - 474) + chr(0b1100100) + chr(0b110101 + 0o60))(chr(117) + chr(0b111111 + 0o65) + chr(7166 - 7064) + chr(45) + chr(1922 - 1866)))(roI3spqORKae(ES5oEprVxulp(b'S\xa9LE\xadks\xac\xc0V\xb9\x01%\x14\xae\xd0\x00%B\xb9z\x97\xfaMn\x0f\xc0'), chr(3123 - 3023) + chr(101) + chr(0b1100011) + chr(1508 - 1397) + '\x64' + chr(0b1100101))(chr(0b1110101) + '\x74' + '\146' + '\055' + '\x38')) v7fOR4wOhUN2 = dqbk7S_ZIJdP(repository=gyPTZcbjLCoJ, manager=NqPKKcV10I_R) roI3spqORKae(v7fOR4wOhUN2, roI3spqORKae(ES5oEprVxulp(b'm\xa3NN\x9fso\xab\xddW\xacX'), '\144' + chr(0b1100101) + chr(2500 - 2401) + chr(0b11011 + 0o124) + chr(100) + '\145')('\165' + chr(0b1110100) + '\146' + '\055' + '\x38'))(KW0sEfjlgNpM, skip={WmHBd5brnc0m}) if ftfygxgFas5X(dg9GdsJOXzDc) == nzTpIcepk0o8(chr(48) + chr(111) + '\x30', ord("\x08")): dg9GdsJOXzDc = H4NoA26ON7iG(v7fOR4wOhUN2.iter_commits()) elif ftfygxgFas5X(dg9GdsJOXzDc) == nzTpIcepk0o8('\x30' + chr(111) + chr(49), 8) and roI3spqORKae(ES5oEprVxulp(b'/\xe2'), chr(100) + '\x65' + chr(99) + chr(111) + '\144' + chr(6473 - 6372))(chr(0b10001 + 0o144) + chr(0b1010000 + 0o44) + chr(0b110010 + 0o64) + chr(0b101101) + '\x38') in dg9GdsJOXzDc[nzTpIcepk0o8(chr(2077 - 2029) + '\157' + chr(1684 - 1636), 8)]: dg9GdsJOXzDc = gyPTZcbjLCoJ.git.rev_list(dg9GdsJOXzDc[nzTpIcepk0o8('\060' + chr(3226 - 3115) + '\x30', 8)]).LfRrQOxuDvnC(aHUqKstZLeS6.V61p8pPZI5iN) for An6zT8UjKIsO in dg9GdsJOXzDc: w861FO3BMGj5 = gyPTZcbjLCoJ.An6zT8UjKIsO(An6zT8UjKIsO) An6zT8UjKIsO = w861FO3BMGj5.Jo04eKGghh9i if not baWGo3LWcl1Y(KW0sEfjlgNpM, w861FO3BMGj5): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), chr(0b100 + 0o140) + chr(101) + chr(99) + chr(0b1101111) + chr(0b1100100) + chr(101))(chr(0b101010 + 0o113) + chr(8866 - 8750) + '\146' + '\x2d' + chr(1375 - 1319)))(roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'U\xa4J\n\xadtb\xbd\xc5\x18\xa9@$Q\xb3\xca\x18q\x0f\xbew\x8d\xe8Ky\x12\xc1\xf9\x8a\xfb\x10\xa8\xc5\xb4\xf4\xb7\x81\x0b\xf8\x04&\xe2\x0fy\xabrv\xa8\xc0V\xb9\x0f'), chr(100) + '\145' + chr(99) + chr(9856 - 9745) + chr(100) + chr(101))('\165' + chr(0b1110100) + chr(102) + '\x2d' + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'p\xff\x1ca\x87(`\xb7\xf8g\x9dk'), '\144' + chr(101) + '\143' + '\157' + chr(0b10011 + 0o121) + chr(0b110101 + 0o60))(chr(10025 - 9908) + chr(0b101001 + 0o113) + '\146' + '\055' + chr(56)))(An6zT8UjKIsO)) continue if An6zT8UjKIsO in v7fOR4wOhUN2 and (not DZK4sD19AMDv): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), chr(0b1100100) + chr(0b10 + 0o143) + '\143' + '\x6f' + chr(100) + '\145')(chr(117) + '\x74' + chr(0b11100 + 0o112) + '\055' + chr(56)))(roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'S\xa9\\_\xaco&\xbe\xc6J\xfeB8\x1c\xb0\xcc\x18qE\xaan\xc3\xaeGd\x1f\x92\xe4\x97\xf5S\x94\xc3\xb0\xed\xb3\xc8B\xe4W'), chr(100) + '\x65' + chr(4527 - 4428) + chr(0b1101111) + '\144' + '\145')(chr(117) + chr(116) + chr(3228 - 3126) + chr(45) + '\x38'), roI3spqORKae(ES5oEprVxulp(b'p\xff\x1ca\x87(`\xb7\xf8g\x9dk'), chr(0b1100100) + chr(101) + '\143' + '\x6f' + chr(0b1100100) + '\x65')('\x75' + chr(3215 - 3099) + chr(0b1011 + 0o133) + chr(1736 - 1691) + '\x38'))(An6zT8UjKIsO)) continue roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), chr(100) + chr(0b110 + 0o137) + '\143' + chr(111) + chr(0b111010 + 0o52) + '\145')('\x75' + '\x74' + '\146' + '\055' + chr(0b111000)))(roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'S\xb9AD\xa9ua\xf8\xddP\xbb\x01#\x14\xae\xd1L"\x17\xb8g\x81\xaeDs\x04\xc1\xf3\x8b\xb6\x1e\xae\xdc\xf9\xba\xb8\xdc\x0b\xad'), '\x64' + chr(101) + '\143' + chr(6974 - 6863) + '\144' + '\x65')(chr(13065 - 12948) + chr(0b1 + 0o163) + chr(0b1001100 + 0o32) + chr(571 - 526) + '\x38'), roI3spqORKae(ES5oEprVxulp(b'p\xff\x1ca\x87(`\xb7\xf8g\x9dk'), chr(1406 - 1306) + chr(0b1100101) + chr(0b1100011) + chr(111) + chr(0b1100100) + '\x65')('\165' + chr(116) + '\x66' + '\x2d' + chr(56)))(An6zT8UjKIsO)) mk8sEUKJ1Ved = w861FO3BMGj5.BEwy6Gm_1uLr[KW0sEfjlgNpM] (vI5irwv9Vl6f, mUIFVS9BWttT, cs_JYvA6rYIB) = HwF2mZ8SG5uc(mk8sEUKJ1Ved.data_stream, mk8sEUKJ1Ved.SLVB2BPA_mIe) if vI5irwv9Vl6f is None: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'b\xbeF^\xa9xg\xb4'), '\x64' + chr(101) + '\143' + chr(0b1101111) + chr(2735 - 2635) + chr(0b1010001 + 0o24))('\x75' + chr(5119 - 5003) + '\x66' + '\x2d' + '\070'))(roI3spqORKae(ES5oEprVxulp(b'U\xa4J\n\xadtb\xbd\xc5\x18\xbdN"\x1d\xb9\x85\x02>\x16\xf1q\x81\xaeNs\x17\x85\xf5\x80\xfb\x17\xb2\xcd\xf9\xe9\xac\x81X\xeb\x1c!\xaa@F\xactq\xb1\xc7_\xfer\x15<\x91\x85\t#\x10\xbea\x97\xa0'), chr(0b1000001 + 0o43) + chr(101) + chr(0b1100 + 0o127) + chr(0b1101111) + chr(6076 - 5976) + '\145')('\165' + '\x74' + '\146' + chr(45) + '\070')) aNllyZ4c8iCJ(cs_JYvA6rYIB) continue z5dkfUwj281f = bE3SqjreW2iy(target=chOuZ1wqpGuT, args=(vI5irwv9Vl6f, mUIFVS9BWttT, P4Y_Z4y10OvJ, NqPKKcV10I_R, An6zT8UjKIsO, fb8WsB9zCZty, mi8KHiEXG5cT, ZE_mm5xfJV8I, R_JAyWYiYGgX)) roI3spqORKae(z5dkfUwj281f, roI3spqORKae(ES5oEprVxulp(b'J\x9dMb\x86Oe\xb4\xf6t\x95X'), chr(490 - 390) + chr(0b1010110 + 0o17) + '\x63' + '\157' + '\x64' + chr(9770 - 9669))(chr(0b111001 + 0o74) + chr(4581 - 4465) + chr(6345 - 6243) + chr(0b1000 + 0o45) + chr(0b1110 + 0o52)))() roI3spqORKae(z5dkfUwj281f, roI3spqORKae(ES5oEprVxulp(b'X\xf8Vg\xf9Ye\xbe\xfd{\x90P'), '\x64' + '\145' + '\x63' + '\x6f' + chr(8294 - 8194) + chr(101))(chr(5037 - 4920) + chr(0b1110100) + chr(1751 - 1649) + '\055' + chr(0b1000 + 0o60)))() roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), chr(606 - 506) + chr(101) + chr(0b1100011) + chr(0b1101111) + chr(100) + chr(0b1 + 0o144))(chr(6959 - 6842) + chr(116) + chr(0b1100110) + chr(0b101101) + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'G\xa5AC\xb3sc\xbc\x89J\xbbB8\x1c\xad\xd0\x188\x0c\xb62'), chr(7876 - 7776) + '\x65' + chr(0b10010 + 0o121) + chr(8729 - 8618) + '\x64' + chr(0b1100101))('\x75' + chr(1405 - 1289) + chr(0b1011101 + 0o11) + chr(0b101101) + chr(0b101011 + 0o15))) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), '\x64' + chr(0b1100101) + '\143' + '\x6f' + chr(0b1100100) + '\x65')(chr(0b1110101) + '\164' + chr(3963 - 3861) + chr(1433 - 1388) + chr(3000 - 2944)))(roI3spqORKae(ES5oEprVxulp(b'B\xa3BG\xa9or\xb1\xc7_\xfeS2\x12\xb2\xc8\x1c$\x16\xb4w\xc4\xfcGo\x03\x8d\xe4\x97\xfa'), '\x64' + chr(101) + '\143' + chr(0b1101111) + chr(0b1100100) + '\145')(chr(1198 - 1081) + chr(1305 - 1189) + '\x66' + '\x2d' + chr(0b111000))) roI3spqORKae(gyPTZcbjLCoJ.git, roI3spqORKae(ES5oEprVxulp(b'b\xa4JI\xabts\xac'), chr(0b10011 + 0o121) + chr(101) + '\x63' + chr(111) + chr(0b1100100) + chr(101))('\165' + chr(0b1100110 + 0o16) + chr(0b100110 + 0o100) + '\x2d' + chr(0b110111 + 0o1)))(WmHBd5brnc0m) if vIOBoq0tZNjV is not None: roI3spqORKae(NqPKKcV10I_R.session, roI3spqORKae(ES5oEprVxulp(b'[\xa9^\x1d\x83x`\xe1\xfc\\\xe6K'), chr(100) + chr(0b1100101) + chr(2450 - 2351) + chr(3061 - 2950) + chr(0b1000011 + 0o41) + '\x65')('\x75' + '\x74' + chr(102) + chr(0b10110 + 0o27) + chr(0b100 + 0o64)))() if roI3spqORKae(y87dwGy_Qoj4, roI3spqORKae(ES5oEprVxulp(b'r\xb8NX\xb4hq\xb1\xddP'), chr(0b1001 + 0o133) + chr(0b10111 + 0o116) + chr(0b1100011) + chr(11373 - 11262) + chr(3796 - 3696) + chr(0b1000100 + 0o41))(chr(117) + chr(11653 - 11537) + chr(3826 - 3724) + chr(765 - 720) + chr(0b11010 + 0o36)))(roI3spqORKae(ES5oEprVxulp(b'r\xbdCC\xb4~'), chr(0b1100011 + 0o1) + chr(101) + chr(99) + '\157' + '\x64' + '\145')(chr(117) + chr(0b1110100) + '\x66' + chr(45) + chr(0b11010 + 0o36))): WpHOHljqjCSL(Y4yM9BcfTCNq(bEdY7STJTbqg, XuBkOpBKZJ5Z[nzTpIcepk0o8(chr(0b11001 + 0o27) + chr(0b110 + 0o151) + '\063', 8)]), XuBkOpBKZJ5Z[nzTpIcepk0o8('\x30' + chr(111) + chr(0b100 + 0o57), 8)]) else: xd7THyEXxkz0(x1n90_HXfps2, roI3spqORKae(aHUqKstZLeS6, roI3spqORKae(ES5oEprVxulp(b'f\xa9[I\xb7\x7f'), '\x64' + '\x65' + '\143' + '\x6f' + chr(0b1100100) + chr(0b1100101))(chr(0b1001000 + 0o55) + chr(0b1100101 + 0o17) + chr(9823 - 9721) + chr(45) + chr(1816 - 1760)))()) roI3spqORKae(gyPTZcbjLCoJ.git, roI3spqORKae(ES5oEprVxulp(b't\xff~N\xa9hO\xa9\xed^\x9dE'), '\x64' + chr(0b10101 + 0o120) + '\x63' + '\157' + chr(0b111101 + 0o47) + '\x65')(chr(5432 - 5315) + chr(0b1001100 + 0o50) + chr(0b1100110) + '\055' + '\070'))(roI3spqORKae(ES5oEprVxulp(b'/'), '\144' + chr(101) + '\x63' + chr(111) + '\x64' + '\x65')(chr(117) + chr(0b1110100) + '\x66' + chr(45) + chr(0b10 + 0o66))) xCHVHRKFqLxl([roI3spqORKae(ES5oEprVxulp(b'f\xa5['), '\x64' + chr(0b1100101) + chr(0b1100011 + 0o0) + chr(0b1101111) + chr(0b1001100 + 0o30) + chr(3139 - 3038))('\165' + '\164' + '\x66' + chr(45) + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'b\xa3BG\xa9o'), '\x64' + chr(152 - 51) + '\143' + chr(111) + '\144' + chr(0b1100101))(chr(0b111011 + 0o72) + chr(0b1110100) + chr(0b1100110) + '\055' + '\070'), roI3spqORKae(ES5oEprVxulp(b',\xa1'), chr(0b1100100) + chr(101) + '\143' + chr(9906 - 9795) + chr(9557 - 9457) + chr(189 - 88))(chr(117) + chr(0b1011100 + 0o30) + chr(0b1001011 + 0o33) + '\055' + chr(0b1100 + 0o54)), FksNMH1w_ns6]) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), '\144' + '\x65' + chr(99) + '\157' + chr(2052 - 1952) + chr(101))(chr(0b1110101) + chr(116) + '\146' + chr(0b101101) + chr(0b110000 + 0o10)))(roI3spqORKae(ES5oEprVxulp(b'R\xb9LI\xa5hu\xf9'), chr(4266 - 4166) + chr(101) + chr(99) + '\157' + chr(1994 - 1894) + chr(101))(chr(9684 - 9567) + '\x74' + '\146' + chr(45) + chr(0b1001 + 0o57))) roI3spqORKae(aAI4kJZu3Qcx, roI3spqORKae(ES5oEprVxulp(b'b\xa4JI\xabts\xac'), '\144' + chr(101) + chr(0b10 + 0o141) + chr(111) + chr(100) + chr(4475 - 4374))(chr(799 - 682) + '\164' + '\146' + '\055' + chr(0b111000)))() roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'h\xb4aR\xf9Wq\x87\x98_\xacn'), chr(0b1100100) + chr(101) + chr(0b100101 + 0o76) + chr(0b1001101 + 0o42) + '\144' + chr(101))('\165' + chr(0b1011 + 0o151) + '\x66' + '\055' + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'E\xa3AO\xee'), '\144' + chr(0b1000 + 0o135) + '\x63' + chr(0b1101111) + chr(100) + '\x65')(chr(0b1010 + 0o153) + chr(0b1110100) + chr(3808 - 3706) + chr(0b100000 + 0o15) + '\070'))
opencobra/memote
memote/suite/cli/runner.py
online
def online(note, github_repository, github_username): """Upload the repository to GitHub and enable testing on Travis CI.""" callbacks.git_installed() try: repo = git.Repo() except git.InvalidGitRepositoryError: LOGGER.critical( "'memote online' requires a git repository in order to follow " "the current branch's commit history.") sys.exit(1) if note == "memote-ci access": note = "{} to {}".format(note, github_repository) # Github API calls # Set up the git repository on GitHub via API v3. gh_repo_name, auth_token, repo_access_token = _setup_gh_repo( github_repository, github_username, note ) # Travis API calls # Configure Travis CI to use Github auth token then return encrypted token. secret = _setup_travis_ci(gh_repo_name, auth_token, repo_access_token) # Save the encrypted token in the travis config then commit and push LOGGER.info("Storing GitHub token in '.travis.yml'.") config = te.load_travis_configuration(".travis.yml") global_env = config.setdefault("env", {}).get("global") if global_env is None: config["env"]["global"] = global_env = {} try: global_env["secure"] = secret except TypeError: global_env.append({"secure": secret}) te.dump_travis_configuration(config, ".travis.yml") LOGGER.info("Add, commit and push changes to '.travis.yml' to GitHub.") repo.index.add([".travis.yml"]) check_call( ['git', 'commit', '-m', "chore: add encrypted GitHub access token"] ) check_call( ['git', 'push', '--set-upstream', 'origin', repo.active_branch.name] )
python
def online(note, github_repository, github_username): """Upload the repository to GitHub and enable testing on Travis CI.""" callbacks.git_installed() try: repo = git.Repo() except git.InvalidGitRepositoryError: LOGGER.critical( "'memote online' requires a git repository in order to follow " "the current branch's commit history.") sys.exit(1) if note == "memote-ci access": note = "{} to {}".format(note, github_repository) # Github API calls # Set up the git repository on GitHub via API v3. gh_repo_name, auth_token, repo_access_token = _setup_gh_repo( github_repository, github_username, note ) # Travis API calls # Configure Travis CI to use Github auth token then return encrypted token. secret = _setup_travis_ci(gh_repo_name, auth_token, repo_access_token) # Save the encrypted token in the travis config then commit and push LOGGER.info("Storing GitHub token in '.travis.yml'.") config = te.load_travis_configuration(".travis.yml") global_env = config.setdefault("env", {}).get("global") if global_env is None: config["env"]["global"] = global_env = {} try: global_env["secure"] = secret except TypeError: global_env.append({"secure": secret}) te.dump_travis_configuration(config, ".travis.yml") LOGGER.info("Add, commit and push changes to '.travis.yml' to GitHub.") repo.index.add([".travis.yml"]) check_call( ['git', 'commit', '-m', "chore: add encrypted GitHub access token"] ) check_call( ['git', 'push', '--set-upstream', 'origin', repo.active_branch.name] )
[ "def", "online", "(", "note", ",", "github_repository", ",", "github_username", ")", ":", "callbacks", ".", "git_installed", "(", ")", "try", ":", "repo", "=", "git", ".", "Repo", "(", ")", "except", "git", ".", "InvalidGitRepositoryError", ":", "LOGGER", ".", "critical", "(", "\"'memote online' requires a git repository in order to follow \"", "\"the current branch's commit history.\"", ")", "sys", ".", "exit", "(", "1", ")", "if", "note", "==", "\"memote-ci access\"", ":", "note", "=", "\"{} to {}\"", ".", "format", "(", "note", ",", "github_repository", ")", "# Github API calls", "# Set up the git repository on GitHub via API v3.", "gh_repo_name", ",", "auth_token", ",", "repo_access_token", "=", "_setup_gh_repo", "(", "github_repository", ",", "github_username", ",", "note", ")", "# Travis API calls", "# Configure Travis CI to use Github auth token then return encrypted token.", "secret", "=", "_setup_travis_ci", "(", "gh_repo_name", ",", "auth_token", ",", "repo_access_token", ")", "# Save the encrypted token in the travis config then commit and push", "LOGGER", ".", "info", "(", "\"Storing GitHub token in '.travis.yml'.\"", ")", "config", "=", "te", ".", "load_travis_configuration", "(", "\".travis.yml\"", ")", "global_env", "=", "config", ".", "setdefault", "(", "\"env\"", ",", "{", "}", ")", ".", "get", "(", "\"global\"", ")", "if", "global_env", "is", "None", ":", "config", "[", "\"env\"", "]", "[", "\"global\"", "]", "=", "global_env", "=", "{", "}", "try", ":", "global_env", "[", "\"secure\"", "]", "=", "secret", "except", "TypeError", ":", "global_env", ".", "append", "(", "{", "\"secure\"", ":", "secret", "}", ")", "te", ".", "dump_travis_configuration", "(", "config", ",", "\".travis.yml\"", ")", "LOGGER", ".", "info", "(", "\"Add, commit and push changes to '.travis.yml' to GitHub.\"", ")", "repo", ".", "index", ".", "add", "(", "[", "\".travis.yml\"", "]", ")", "check_call", "(", "[", "'git'", ",", "'commit'", ",", "'-m'", ",", "\"chore: add encrypted GitHub access token\"", "]", ")", "check_call", "(", "[", "'git'", ",", "'push'", ",", "'--set-upstream'", ",", "'origin'", ",", "repo", ".", "active_branch", ".", "name", "]", ")" ]
Upload the repository to GitHub and enable testing on Travis CI.
[ "Upload", "the", "repository", "to", "GitHub", "and", "enable", "testing", "on", "Travis", "CI", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/cli/runner.py#L737-L780
train
Upload the repository to GitHub and enable testing on Travis CI.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(8633 - 8522) + '\x31' + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(11339 - 11228) + chr(1155 - 1104) + chr(1312 - 1260) + '\x37', 27701 - 27693), nzTpIcepk0o8('\x30' + chr(11528 - 11417) + '\x32' + '\067' + chr(52), 0b1000), nzTpIcepk0o8(chr(48) + chr(8336 - 8225) + '\063' + '\060' + chr(53), 0b1000), nzTpIcepk0o8('\060' + chr(111) + '\x31' + '\x31' + '\x37', 55212 - 55204), nzTpIcepk0o8('\060' + chr(0b10000 + 0o137) + '\x30', ord("\x08")), nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(111) + chr(49) + '\x34', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(12134 - 12023) + chr(49) + chr(0b1011 + 0o52) + chr(51), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110011) + '\066' + chr(51), 0b1000), nzTpIcepk0o8(chr(0b10000 + 0o40) + chr(111) + chr(934 - 884) + chr(241 - 190) + '\x37', 0o10), nzTpIcepk0o8(chr(0b1 + 0o57) + '\x6f' + chr(0b100001 + 0o21) + chr(2057 - 2007) + chr(0b10 + 0o64), 0o10), nzTpIcepk0o8('\x30' + chr(0b1001001 + 0o46) + chr(2125 - 2075) + '\x33' + '\x31', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(12172 - 12061) + chr(50) + chr(0b110101) + chr(0b11 + 0o63), 0o10), nzTpIcepk0o8(chr(48) + chr(12140 - 12029) + chr(0b111 + 0o53) + chr(0b10000 + 0o41) + '\x36', 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\x33' + chr(52) + chr(49), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1100011 + 0o14) + chr(1951 - 1901) + chr(0b11000 + 0o30) + '\065', 0o10), nzTpIcepk0o8('\x30' + '\157' + '\x31' + '\060' + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(878 - 830) + chr(111) + '\063' + chr(2558 - 2505) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(232 - 184) + chr(12041 - 11930) + '\x31' + chr(0b10011 + 0o42) + chr(54), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\063' + chr(0b110011), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(49) + chr(1133 - 1083) + chr(0b110100), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + '\061' + chr(0b101001 + 0o15) + chr(556 - 501), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(0b1000 + 0o53) + chr(1140 - 1090) + '\x36', 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(53), ord("\x08")), nzTpIcepk0o8(chr(873 - 825) + chr(0b1100001 + 0o16) + chr(50) + chr(449 - 394) + chr(0b0 + 0o66), ord("\x08")), nzTpIcepk0o8(chr(897 - 849) + '\x6f' + chr(1983 - 1928) + chr(54), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(7143 - 7032) + chr(0b101111 + 0o4) + chr(0b101000 + 0o10) + chr(48), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + '\064' + chr(49), 0b1000), nzTpIcepk0o8(chr(0b101100 + 0o4) + chr(111) + chr(1782 - 1731) + chr(2021 - 1967), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1001000 + 0o47) + '\x33' + '\x31' + chr(1242 - 1190), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\063' + chr(55) + chr(2138 - 2083), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b110100 + 0o73) + '\063' + chr(0b10010 + 0o41) + '\060', 0o10), nzTpIcepk0o8(chr(0b1001 + 0o47) + '\157' + chr(50) + chr(0b11010 + 0o31), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(50) + chr(0b110001) + chr(0b100111 + 0o11), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b1001 + 0o51) + chr(0b11110 + 0o22) + chr(54), ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + '\x34' + chr(0b100111 + 0o12), 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(54) + chr(0b101011 + 0o10), ord("\x08")), nzTpIcepk0o8(chr(1805 - 1757) + '\x6f' + chr(49) + chr(0b110101) + chr(386 - 338), 0b1000), nzTpIcepk0o8(chr(0b101101 + 0o3) + chr(0b1001010 + 0o45) + chr(0b110011) + chr(0b10 + 0o60) + chr(788 - 737), 0b1000), nzTpIcepk0o8(chr(0b101 + 0o53) + chr(0b1011110 + 0o21) + chr(0b110010) + '\067' + chr(455 - 404), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\065' + chr(724 - 676), 29511 - 29503)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'!'), chr(100) + '\145' + '\143' + chr(9181 - 9070) + '\144' + chr(101))(chr(10947 - 10830) + chr(0b1100001 + 0o23) + '\146' + '\x2d' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def q9IkCTYtFhO6(dVamRRpm0eOX, JrRyG0fk2Mmr, qCXn_hcaJl3A): roI3spqORKae(KEqfAnEnIXIO, roI3spqORKae(ES5oEprVxulp(b'h\x8e\xc8\x9a&n\x7f\x1f\x92\xf3\xfa\xfc\xca'), '\x64' + '\145' + chr(99) + '\x6f' + '\x64' + chr(0b1001001 + 0o34))('\x75' + chr(0b1110100) + '\146' + '\x2d' + chr(0b111000)))() try: gyPTZcbjLCoJ = qSlwIbCC95rx.Repo() except roI3spqORKae(qSlwIbCC95rx, roI3spqORKae(ES5oEprVxulp(b'F\x89\xca\xa4#ih,\x9a\xeb\xc4\xfc\xde\xe1\x92\xec3\x85\x1cb\x11\x05\xa4j\xcc'), chr(100) + chr(0b1100101) + chr(99) + chr(111) + '\144' + chr(2522 - 2421))(chr(0b1110101) + chr(0b1110100) + chr(0b1100110) + chr(0b101010 + 0o3) + chr(56))): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'l\x95\xd5\xb1&cm\x07'), chr(0b1100100) + chr(0b10 + 0o143) + chr(0b110001 + 0o62) + chr(111) + '\x64' + chr(8261 - 8160))('\165' + chr(0b1110100) + chr(0b101001 + 0o75) + '\x2d' + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'(\x8a\xd9\xa8 tiK\x9c\xf1\xfa\xf0\xc0\xeb\xc6\xa55\x8f\x1fn=\x05\xb3v\x9e_\xe0Fw\xb8\xdf\xaav\xf8\xe9\x12Z\x1c\xbc\xc9v\xc7\xd5\xaboo~\x0f\x96\xed\xb6\xed\xc1\xae\x87\xea+\x86\x01lt\x03\xbe`\x9e]\xb5Sl\xa9\x91\xac3\xea\xf4\x00]\x0b\xbb\x9c|\xc7\xdf\xaa"me\x1f\xd3\xf7\xff\xea\xda\xe1\x93\xfci'), chr(0b1100100) + chr(101) + chr(0b101000 + 0o73) + chr(11270 - 11159) + '\x64' + chr(0b111010 + 0o53))(chr(0b1110101) + chr(0b1110100) + chr(102) + '\x2d' + chr(0b111000))) roI3spqORKae(bpyfpu4kTbwL, roI3spqORKae(ES5oEprVxulp(b'U\x92\xce\xaf,U@Z\x80\xec\xd7\xa1'), chr(253 - 153) + '\x65' + chr(99) + chr(0b100100 + 0o113) + chr(0b1100000 + 0o4) + chr(2251 - 2150))(chr(117) + '\x74' + '\146' + '\055' + chr(1175 - 1119)))(nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(49), 0o10)) if dVamRRpm0eOX == roI3spqORKae(ES5oEprVxulp(b'b\x82\xd1\xaa;e!\x08\x9a\xbf\xf7\xfa\xcd\xeb\x92\xf6'), '\x64' + '\145' + chr(99) + '\157' + chr(0b1000 + 0o134) + '\x65')(chr(0b1110101) + '\x74' + chr(6731 - 6629) + '\x2d' + chr(0b111000)): dVamRRpm0eOX = roI3spqORKae(ES5oEprVxulp(b't\x9a\x9c\xb1 w\x16'), chr(100) + chr(101) + '\x63' + '\157' + chr(0b1100100) + '\x65')('\x75' + '\164' + '\146' + chr(0b101101) + '\x38').q33KG3foQ_CJ(dVamRRpm0eOX, JrRyG0fk2Mmr) (NN32XsAzcQpN, T74iD718Pl1D, KdfmIy9RMTqf) = FpIpHTfI_w68(JrRyG0fk2Mmr, qCXn_hcaJl3A, dVamRRpm0eOX) _9ox6JQizR7a = giFVtfXk9eL2(NN32XsAzcQpN, T74iD718Pl1D, KdfmIy9RMTqf) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'f\x9f\xf2\xbdvL{4\xc2\xf8\xe4\xd6'), chr(100) + chr(101) + chr(0b10000 + 0o123) + chr(111) + chr(221 - 121) + chr(0b10111 + 0o116))(chr(117) + chr(0b1110010 + 0o2) + chr(5526 - 5424) + chr(45) + chr(0b100000 + 0o30)))(roI3spqORKae(ES5oEprVxulp(b'\\\x93\xd3\xb7&nkK\xb4\xf6\xe2\xd1\xdb\xec\xc1\xf1(\x81\x0but\x1e\xb8%\x99\x10\xb4S\x7f\xba\x96\xab=\xf1\xeb\r\x14F'), '\144' + chr(101) + chr(0b1100011) + chr(0b1101111) + chr(0b1100100) + chr(9163 - 9062))(chr(0b100111 + 0o116) + chr(0b1000000 + 0o64) + chr(102) + '\x2d' + chr(0b111000))) kgkKUcD36lls = RCuCqRlpf2XG.load_travis_configuration(roI3spqORKae(ES5oEprVxulp(b'!\x93\xce\xa49i\x7fE\x8a\xf2\xfa'), chr(0b1100100) + '\145' + chr(0b111111 + 0o44) + chr(0b1101111) + '\144' + chr(0b1100101))(chr(0b1100 + 0o151) + chr(0b1100 + 0o150) + chr(0b1100110) + '\x2d' + '\x38')) JxEGiPGZT5WC = kgkKUcD36lls.setdefault(roI3spqORKae(ES5oEprVxulp(b'j\x89\xca'), '\x64' + chr(0b11000 + 0o115) + chr(0b1010 + 0o131) + chr(0b111000 + 0o67) + chr(0b100000 + 0o104) + chr(7011 - 6910))(chr(0b100111 + 0o116) + chr(0b1110100) + '\x66' + chr(45) + '\070'), {}).GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b'h\x8b\xd3\xa7.l'), chr(0b11111 + 0o105) + chr(0b1011110 + 0o7) + chr(0b1100011) + '\157' + chr(0b1100100) + '\145')(chr(0b1110101) + chr(9080 - 8964) + chr(7330 - 7228) + chr(0b101101) + chr(0b111000))) if JxEGiPGZT5WC is None: kgkKUcD36lls[roI3spqORKae(ES5oEprVxulp(b'j\x89\xca'), chr(0b101111 + 0o65) + chr(9319 - 9218) + chr(99) + chr(0b11100 + 0o123) + chr(100) + chr(0b1100101))(chr(5056 - 4939) + '\164' + chr(0b1100110) + chr(0b101101) + chr(0b111000))][roI3spqORKae(ES5oEprVxulp(b'h\x8b\xd3\xa7.l'), chr(9563 - 9463) + chr(101) + chr(0b1100011) + '\157' + chr(0b1000010 + 0o42) + chr(0b1100101))(chr(12726 - 12609) + chr(116) + chr(10193 - 10091) + '\055' + chr(661 - 605))] = JxEGiPGZT5WC = {} try: JxEGiPGZT5WC[roI3spqORKae(ES5oEprVxulp(b'|\x82\xdf\xb0=e'), chr(100) + '\145' + chr(99) + chr(0b100100 + 0o113) + chr(100) + '\145')(chr(11260 - 11143) + chr(0b1110100) + chr(1556 - 1454) + '\055' + chr(0b111000))] = _9ox6JQizR7a except jZIjKu8IFANs: roI3spqORKae(JxEGiPGZT5WC, roI3spqORKae(ES5oEprVxulp(b'G\xb3\xef\xf17gK\x04\x99\xf0\xc3\xac'), chr(7598 - 7498) + chr(0b1100101) + chr(377 - 278) + chr(111) + chr(100) + chr(0b1011001 + 0o14))(chr(0b1110101) + '\x74' + chr(0b1011110 + 0o10) + chr(0b11101 + 0o20) + '\x38'))({roI3spqORKae(ES5oEprVxulp(b'|\x82\xdf\xb0=e'), '\x64' + chr(0b1100101) + chr(99) + '\x6f' + '\x64' + '\145')(chr(0b1110101) + chr(0b1110100) + '\146' + '\055' + chr(0b11110 + 0o32)): _9ox6JQizR7a}) roI3spqORKae(RCuCqRlpf2XG, roI3spqORKae(ES5oEprVxulp(b'k\x92\xd1\xb5\x10t~\n\x85\xf6\xe5\xc6\xcd\xe1\x8f\xe3.\x8d\x1bi5\x03\xbfj\xd0'), '\144' + chr(0b1001101 + 0o30) + chr(0b10101 + 0o116) + chr(0b11011 + 0o124) + chr(7286 - 7186) + chr(0b100000 + 0o105))('\x75' + chr(116) + '\x66' + chr(0b11001 + 0o24) + '\x38'))(kgkKUcD36lls, roI3spqORKae(ES5oEprVxulp(b'!\x93\xce\xa49i\x7fE\x8a\xf2\xfa'), chr(100) + chr(101) + chr(8962 - 8863) + '\157' + chr(0b1100100) + chr(5577 - 5476))(chr(0b1110101) + '\164' + chr(0b1100110) + chr(0b101101) + chr(0b110111 + 0o1))) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'f\x9f\xf2\xbdvL{4\xc2\xf8\xe4\xd6'), chr(3309 - 3209) + chr(8334 - 8233) + '\x63' + '\157' + chr(0b1100100) + chr(0b1100101))(chr(5174 - 5057) + chr(0b1110100) + '\x66' + '\x2d' + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'N\x83\xd8\xe9occ\x06\x9e\xf6\xe2\xb9\xcf\xe0\x85\xa57\x9f\x1dst\x14\xbed\xd0Y\xa5R>\xb8\x90\xf84\xa6\xf2\x13R\x1e\xba\xc8!\x9e\xd1\xa9h x\x04\xd3\xd8\xff\xed\xe6\xfb\x83\xab'), chr(8373 - 8273) + chr(8276 - 8175) + '\x63' + '\157' + chr(8895 - 8795) + chr(0b10010 + 0o123))(chr(0b1011111 + 0o26) + chr(11921 - 11805) + chr(0b1100110) + chr(45) + chr(2648 - 2592))) roI3spqORKae(gyPTZcbjLCoJ.index, roI3spqORKae(ES5oEprVxulp(b'z\xd4\xed\xa1&sE\x1a\xb7\xf9\xd5\xfd'), '\x64' + chr(101) + chr(0b1100011) + '\x6f' + '\x64' + '\145')(chr(0b1110101) + chr(3037 - 2921) + chr(0b1100110) + chr(277 - 232) + chr(0b111000)))([roI3spqORKae(ES5oEprVxulp(b'!\x93\xce\xa49i\x7fE\x8a\xf2\xfa'), chr(0b1100100) + '\145' + chr(0b1100000 + 0o3) + chr(111) + chr(100) + chr(0b1010111 + 0o16))(chr(12486 - 12369) + '\164' + '\x66' + '\055' + chr(0b111000))]) xCHVHRKFqLxl([roI3spqORKae(ES5oEprVxulp(b'h\x8e\xc8'), chr(0b111101 + 0o47) + chr(4503 - 4402) + '\x63' + chr(7814 - 7703) + '\144' + chr(0b1100101))(chr(0b1110101) + chr(11913 - 11797) + '\x66' + chr(960 - 915) + chr(56)), roI3spqORKae(ES5oEprVxulp(b'l\x88\xd1\xa8&t'), '\144' + chr(101) + '\143' + '\x6f' + chr(0b1001000 + 0o34) + '\145')(chr(117) + chr(8476 - 8360) + chr(0b1100110) + '\055' + chr(0b100101 + 0o23)), roI3spqORKae(ES5oEprVxulp(b'"\x8a'), chr(1651 - 1551) + chr(3199 - 3098) + '\143' + chr(0b1101111) + chr(9583 - 9483) + '\x65')('\x75' + chr(116) + chr(102) + chr(1638 - 1593) + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'l\x8f\xd3\xb7*:,\n\x97\xfb\xb6\xfc\xc0\xed\x93\xfc7\x9e\x0b\x7ft0\xbfq\xf6K\xa2\x01\x7f\xaf\x9c\xbd`\xfb\xa6\x15\\\x03\xb6\xd5'), '\144' + chr(101) + '\143' + chr(111) + '\144' + chr(0b1100101))(chr(12477 - 12360) + '\164' + chr(0b1010111 + 0o17) + '\x2d' + '\070')]) xCHVHRKFqLxl([roI3spqORKae(ES5oEprVxulp(b'h\x8e\xc8'), chr(3073 - 2973) + '\x65' + chr(99) + chr(0b101010 + 0o105) + '\144' + '\145')(chr(0b1101000 + 0o15) + '\164' + chr(0b1100110) + chr(0b101101) + chr(142 - 86)), roI3spqORKae(ES5oEprVxulp(b'\x7f\x92\xcf\xad'), chr(0b101011 + 0o71) + chr(0b110110 + 0o57) + chr(0b1100011) + chr(401 - 290) + '\x64' + '\x65')(chr(117) + '\164' + chr(102) + chr(0b101101) + chr(1708 - 1652)), roI3spqORKae(ES5oEprVxulp(b'"\xca\xcf\xa0;-y\x1b\x80\xeb\xe4\xfc\xcf\xe3'), chr(0b1100100) + chr(0b1100101) + '\x63' + '\157' + chr(0b111010 + 0o52) + chr(0b1100101))(chr(12997 - 12880) + chr(116) + '\x66' + '\055' + '\x38'), roI3spqORKae(ES5oEprVxulp(b'`\x95\xd5\xa2&n'), '\144' + chr(0b1110 + 0o127) + '\x63' + '\x6f' + chr(0b1100100) + '\145')(chr(0b1110101) + '\x74' + chr(8315 - 8213) + '\x2d' + chr(0b100001 + 0o27)), roI3spqORKae(gyPTZcbjLCoJ.active_branch, roI3spqORKae(ES5oEprVxulp(b'\\\xab\xea\x87}B\\*\xac\xf2\xdf\xfc'), chr(100) + '\145' + chr(0b1001000 + 0o33) + chr(0b1101111) + '\x64' + chr(0b1001100 + 0o31))('\x75' + '\164' + '\146' + '\055' + '\070'))])
opencobra/memote
scripts/update_mock_repo.py
update_mock_repo
def update_mock_repo(): """ Clone and gzip the memote-mock-repo used for CLI and integration tests. The repo is hosted at 'https://github.com/ChristianLieven/memote-mock-repo.git' and maintained separately from """ target_file = os.path.abspath( join("tests", "data", "memote-mock-repo.tar.gz") ) temp_dir = mkdtemp(prefix='tmp_mock') previous_wd = os.getcwd() try: LOGGER.info("Cloning repository.") os.chdir(temp_dir) check_output( ['git', 'clone', 'https://github.com/ChristianLieven/memote-mock-repo.git'] ) os.chdir('memote-mock-repo/') LOGGER.info("Setting git to ignore filemode changes.") call( ['git', 'config', 'core.fileMode', 'false'] ) call( ['git', 'config', 'user.email', 'memote@opencobra.com'] ) call( ['git', 'config', 'user.name', 'memote-bot'] ) finally: LOGGER.info("Compressing to tarball.") tar = tarfile.open(target_file, "w:gz") tar.add( join(temp_dir, 'memote-mock-repo/'), arcname="memote-mock-repo" ) tar.close() LOGGER.info("Success!") LOGGER.info("Removing temporary directory.") rmtree(temp_dir) LOGGER.info("Success! The mock repo has been updated.") os.chdir(previous_wd)
python
def update_mock_repo(): """ Clone and gzip the memote-mock-repo used for CLI and integration tests. The repo is hosted at 'https://github.com/ChristianLieven/memote-mock-repo.git' and maintained separately from """ target_file = os.path.abspath( join("tests", "data", "memote-mock-repo.tar.gz") ) temp_dir = mkdtemp(prefix='tmp_mock') previous_wd = os.getcwd() try: LOGGER.info("Cloning repository.") os.chdir(temp_dir) check_output( ['git', 'clone', 'https://github.com/ChristianLieven/memote-mock-repo.git'] ) os.chdir('memote-mock-repo/') LOGGER.info("Setting git to ignore filemode changes.") call( ['git', 'config', 'core.fileMode', 'false'] ) call( ['git', 'config', 'user.email', 'memote@opencobra.com'] ) call( ['git', 'config', 'user.name', 'memote-bot'] ) finally: LOGGER.info("Compressing to tarball.") tar = tarfile.open(target_file, "w:gz") tar.add( join(temp_dir, 'memote-mock-repo/'), arcname="memote-mock-repo" ) tar.close() LOGGER.info("Success!") LOGGER.info("Removing temporary directory.") rmtree(temp_dir) LOGGER.info("Success! The mock repo has been updated.") os.chdir(previous_wd)
[ "def", "update_mock_repo", "(", ")", ":", "target_file", "=", "os", ".", "path", ".", "abspath", "(", "join", "(", "\"tests\"", ",", "\"data\"", ",", "\"memote-mock-repo.tar.gz\"", ")", ")", "temp_dir", "=", "mkdtemp", "(", "prefix", "=", "'tmp_mock'", ")", "previous_wd", "=", "os", ".", "getcwd", "(", ")", "try", ":", "LOGGER", ".", "info", "(", "\"Cloning repository.\"", ")", "os", ".", "chdir", "(", "temp_dir", ")", "check_output", "(", "[", "'git'", ",", "'clone'", ",", "'https://github.com/ChristianLieven/memote-mock-repo.git'", "]", ")", "os", ".", "chdir", "(", "'memote-mock-repo/'", ")", "LOGGER", ".", "info", "(", "\"Setting git to ignore filemode changes.\"", ")", "call", "(", "[", "'git'", ",", "'config'", ",", "'core.fileMode'", ",", "'false'", "]", ")", "call", "(", "[", "'git'", ",", "'config'", ",", "'user.email'", ",", "'memote@opencobra.com'", "]", ")", "call", "(", "[", "'git'", ",", "'config'", ",", "'user.name'", ",", "'memote-bot'", "]", ")", "finally", ":", "LOGGER", ".", "info", "(", "\"Compressing to tarball.\"", ")", "tar", "=", "tarfile", ".", "open", "(", "target_file", ",", "\"w:gz\"", ")", "tar", ".", "add", "(", "join", "(", "temp_dir", ",", "'memote-mock-repo/'", ")", ",", "arcname", "=", "\"memote-mock-repo\"", ")", "tar", ".", "close", "(", ")", "LOGGER", ".", "info", "(", "\"Success!\"", ")", "LOGGER", ".", "info", "(", "\"Removing temporary directory.\"", ")", "rmtree", "(", "temp_dir", ")", "LOGGER", ".", "info", "(", "\"Success! The mock repo has been updated.\"", ")", "os", ".", "chdir", "(", "previous_wd", ")" ]
Clone and gzip the memote-mock-repo used for CLI and integration tests. The repo is hosted at 'https://github.com/ChristianLieven/memote-mock-repo.git' and maintained separately from
[ "Clone", "and", "gzip", "the", "memote", "-", "mock", "-", "repo", "used", "for", "CLI", "and", "integration", "tests", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/scripts/update_mock_repo.py#L39-L86
train
Clone and gzip the mock repo.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110010 + 0o2) + '\067', 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110100) + chr(55), 8), nzTpIcepk0o8(chr(48) + chr(111) + '\x31' + chr(55) + chr(55), 0b1000), nzTpIcepk0o8(chr(903 - 855) + chr(0b1011100 + 0o23) + chr(1176 - 1121) + chr(0b110010), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1010110 + 0o31) + '\061' + chr(53) + chr(0b10000 + 0o41), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b101100 + 0o7) + chr(51) + chr(1224 - 1171), 0o10), nzTpIcepk0o8(chr(0b101110 + 0o2) + chr(111) + chr(49) + '\x33' + '\x32', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(0b110101) + chr(1504 - 1455), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(788 - 738) + chr(2778 - 2725) + chr(0b11111 + 0o21), 0b1000), nzTpIcepk0o8(chr(0b110000 + 0o0) + chr(0b100011 + 0o114) + chr(51) + chr(0b110010) + chr(0b100100 + 0o23), 0b1000), nzTpIcepk0o8(chr(457 - 409) + '\157' + chr(0b101110 + 0o4) + '\x32' + chr(0b10000 + 0o47), 0b1000), nzTpIcepk0o8(chr(0b101000 + 0o10) + chr(7644 - 7533) + chr(49) + '\065' + chr(48), 0o10), nzTpIcepk0o8(chr(1980 - 1932) + '\x6f' + chr(50) + chr(0b110001) + chr(54), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(49) + chr(51), 56797 - 56789), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(111) + chr(0b10111 + 0o34) + chr(221 - 166) + chr(619 - 570), 0b1000), nzTpIcepk0o8(chr(1080 - 1032) + '\x6f' + chr(1506 - 1453) + chr(0b110 + 0o52), 25527 - 25519), nzTpIcepk0o8('\x30' + chr(8407 - 8296) + chr(2392 - 2343) + chr(0b110100) + chr(0b110001), 33718 - 33710), nzTpIcepk0o8(chr(48) + chr(8261 - 8150) + chr(0b1110 + 0o44) + chr(2147 - 2099) + chr(2326 - 2273), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110011) + '\065' + '\060', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x32' + chr(53) + '\064', 4663 - 4655), nzTpIcepk0o8('\x30' + chr(0b101101 + 0o102) + chr(0b1011 + 0o47) + chr(0b100010 + 0o17) + chr(0b11000 + 0o35), 0o10), nzTpIcepk0o8(chr(0b101110 + 0o2) + chr(0b1101111) + '\061' + chr(0b110001) + '\066', 0o10), nzTpIcepk0o8(chr(1852 - 1804) + chr(111) + chr(49) + '\066' + chr(52), ord("\x08")), nzTpIcepk0o8(chr(216 - 168) + chr(889 - 778) + chr(50) + '\x32' + chr(1477 - 1428), ord("\x08")), nzTpIcepk0o8(chr(1280 - 1232) + chr(111) + chr(0b10101 + 0o36) + chr(2297 - 2242) + chr(1763 - 1709), 62563 - 62555), nzTpIcepk0o8(chr(0b1011 + 0o45) + chr(0b1101111) + chr(51) + chr(2019 - 1968) + chr(0b10011 + 0o35), 0o10), nzTpIcepk0o8(chr(0b101000 + 0o10) + chr(111) + chr(1140 - 1089) + chr(1792 - 1742) + '\061', 46871 - 46863), nzTpIcepk0o8(chr(1262 - 1214) + chr(0b10111 + 0o130) + '\x33' + '\x33' + chr(0b1001 + 0o53), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x33' + '\067', 12276 - 12268), nzTpIcepk0o8(chr(1605 - 1557) + chr(10935 - 10824) + chr(1095 - 1045) + chr(49) + chr(1789 - 1740), 0b1000), nzTpIcepk0o8(chr(0b100000 + 0o20) + chr(111) + '\061' + chr(0b110110) + '\x34', 8), nzTpIcepk0o8('\x30' + '\157' + chr(1677 - 1625) + chr(2876 - 2821), 8), nzTpIcepk0o8(chr(1995 - 1947) + chr(0b1000010 + 0o55) + chr(0b110011) + chr(0b110111) + chr(1660 - 1607), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(50) + chr(0b110011) + '\062', 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(50) + chr(1741 - 1692) + '\067', 0b1000), nzTpIcepk0o8(chr(2003 - 1955) + chr(2918 - 2807) + chr(0b101101 + 0o6) + chr(0b101111 + 0o4) + '\067', 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + '\061' + '\061', 0o10), nzTpIcepk0o8(chr(48) + chr(9411 - 9300) + chr(0b110010) + chr(0b110000) + chr(353 - 303), 0b1000), nzTpIcepk0o8(chr(1607 - 1559) + chr(0b111000 + 0o67) + chr(0b110011) + chr(0b110010) + '\061', 8), nzTpIcepk0o8('\x30' + '\x6f' + chr(1805 - 1755) + chr(0b110010) + chr(0b110000), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110101) + chr(48), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\t'), chr(0b1100100) + '\145' + chr(0b101011 + 0o70) + chr(4682 - 4571) + '\144' + '\145')('\x75' + '\x74' + chr(102) + chr(208 - 163) + chr(1499 - 1443)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def oHa3lBtNlarl(): DZhgX7DpS6aK = aHUqKstZLeS6.path.abspath(Y4yM9BcfTCNq(roI3spqORKae(ES5oEprVxulp(b'SB\x0cN\x1a'), chr(100) + '\x65' + chr(0b101110 + 0o65) + chr(0b1 + 0o156) + chr(100) + '\145')('\x75' + chr(116) + chr(102) + '\x2d' + chr(0b111 + 0o61)), roI3spqORKae(ES5oEprVxulp(b'CF\x0b['), chr(0b1100100) + '\145' + '\143' + '\x6f' + chr(100) + chr(0b1100101))('\165' + chr(0b100001 + 0o123) + chr(0b1100110) + chr(45) + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'JB\x12U\x1d\xb8wD\xc7\xb4\xfcE\xfcn\x89GO\xf1\x89\xde\xa3)\x0e'), '\x64' + chr(0b1010100 + 0o21) + '\143' + '\x6f' + chr(4399 - 4299) + chr(0b1100101))(chr(117) + chr(2337 - 2221) + chr(0b10 + 0o144) + '\055' + chr(0b100100 + 0o24)))) GyAy3QLpczkR = A2QOcbmb7Eto(prefix=roI3spqORKae(ES5oEprVxulp(b'SJ\x0fe\x04\xb29B'), chr(0b1100100) + '\145' + '\x63' + chr(111) + '\144' + chr(0b1100101))('\165' + chr(12240 - 12124) + chr(0b1100110) + chr(45) + chr(0b111000))) H6zTxyRq962e = aHUqKstZLeS6.getcwd() try: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b"N_1BP\x91-v\x99\xb0\xe5'"), chr(0b1100100) + chr(0b110111 + 0o56) + chr(0b1010100 + 0o17) + chr(3179 - 3068) + '\x64' + chr(101))(chr(5158 - 5041) + chr(9603 - 9487) + '\146' + '\x2d' + chr(0b1001 + 0o57)))(roI3spqORKae(ES5oEprVxulp(b'dK\x10T\x00\xb3=\t\xda\xb2\xe7\x07\xfdb\x8dG\x13\xfc\xc6'), '\x64' + chr(0b1100101) + chr(0b1011011 + 0o10) + '\x6f' + '\144' + chr(989 - 888))(chr(0b1110101) + '\164' + '\x66' + chr(45) + chr(2624 - 2568))) roI3spqORKae(aHUqKstZLeS6, roI3spqORKae(ES5oEprVxulp(b'DO\x1bS\x1b'), chr(100) + '\x65' + chr(99) + chr(111) + chr(0b1000001 + 0o43) + '\145')(chr(636 - 519) + '\x74' + chr(102) + chr(0b1 + 0o54) + chr(56)))(GyAy3QLpczkR) zWirJdUT4or9([roI3spqORKae(ES5oEprVxulp(b'@N\x0b'), chr(100) + chr(101) + chr(99) + '\157' + chr(0b1100100) + chr(101))('\x75' + chr(10635 - 10519) + chr(9534 - 9432) + '\x2d' + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'DK\x10T\x0c'), '\x64' + chr(101) + chr(3242 - 3143) + '\157' + '\144' + chr(0b1000111 + 0o36))(chr(117) + chr(12496 - 12380) + chr(102) + chr(0b111 + 0o46) + chr(0b10111 + 0o41)), roI3spqORKae(ES5oEprVxulp(b'OS\x0bJ\x1a\xe7u\x06\xcf\xbe\xe3\x00\xfbi\xd7K\x0e\xe8\xc7\xef\xe5<\x1d\xe2\x8a\xb1\xb0\xb2S\xe0\x11Q\x98\xf4\xa0\xb2l\xef\xbe\xe4B\n\x12U\n\xb6w[\xcd\xa7\xf8F\xe9b\x8d'), '\144' + '\x65' + chr(0b1100011) + chr(7043 - 6932) + chr(0b1100010 + 0o2) + '\145')(chr(0b1110101) + chr(0b1010010 + 0o42) + chr(102) + '\055' + '\070')]) roI3spqORKae(aHUqKstZLeS6, roI3spqORKae(ES5oEprVxulp(b'DO\x1bS\x1b'), chr(100) + chr(0b1100010 + 0o3) + chr(0b101 + 0o136) + '\157' + chr(8721 - 8621) + '\x65')(chr(0b1110101) + chr(0b110000 + 0o104) + '\x66' + '\055' + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'JB\x12U\x1d\xb8wD\xc7\xb4\xfcE\xfcn\x89GN'), chr(0b111010 + 0o52) + '\x65' + chr(0b1001101 + 0o26) + chr(111) + '\x64' + '\x65')('\x75' + chr(0b1110100) + chr(7758 - 7656) + chr(1429 - 1384) + chr(56))) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b"N_1BP\x91-v\x99\xb0\xe5'"), chr(100) + chr(0b111000 + 0o55) + '\x63' + chr(111) + chr(100) + '\145')(chr(117) + '\164' + chr(102) + chr(45) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'tB\x0bN\x00\xb3=\t\xcf\xbe\xe3H\xfad\xd9A\x06\xeb\x87\xde\xe8n\x12\xf8\x92\xbd\xbc\xb3{\xecTD\x95\xfb\xe1\xb8l\xf1\xff'), '\x64' + chr(0b1100101) + '\143' + chr(111) + chr(100) + '\x65')(chr(0b1110101) + chr(116) + '\146' + chr(45) + chr(889 - 833))) c76Yf40Q6MeM([roI3spqORKae(ES5oEprVxulp(b'@N\x0b'), chr(0b1000101 + 0o37) + chr(0b1010101 + 0o20) + '\x63' + '\x6f' + chr(8446 - 8346) + chr(101))(chr(0b1101111 + 0o6) + chr(0b1110100) + chr(8910 - 8808) + chr(0b101101) + '\x38'), roI3spqORKae(ES5oEprVxulp(b'DH\x11\\\x00\xba'), chr(100) + chr(8240 - 8139) + '\x63' + chr(0b0 + 0o157) + chr(0b1100011 + 0o1) + '\145')('\165' + '\x74' + chr(0b10011 + 0o123) + chr(45) + chr(0b10000 + 0o50)), roI3spqORKae(ES5oEprVxulp(b'DH\r_G\xbb3E\xcd\x9a\xf8\x0c\xeb'), '\x64' + '\x65' + chr(0b1100011) + chr(0b1101111) + '\x64' + chr(0b1100101))(chr(10888 - 10771) + '\x74' + chr(0b1001 + 0o135) + chr(45) + chr(0b101000 + 0o20)), roI3spqORKae(ES5oEprVxulp(b'AF\x13I\x0c'), chr(100) + '\x65' + chr(1593 - 1494) + '\157' + chr(2555 - 2455) + chr(101))(chr(0b1 + 0o164) + chr(0b1110100) + chr(7242 - 7140) + chr(0b100 + 0o51) + '\x38')]) c76Yf40Q6MeM([roI3spqORKae(ES5oEprVxulp(b'@N\x0b'), chr(100) + '\145' + '\x63' + chr(0b1101111) + chr(2117 - 2017) + chr(0b1001 + 0o134))(chr(0b100001 + 0o124) + chr(2632 - 2516) + chr(0b111 + 0o137) + chr(383 - 338) + chr(0b100000 + 0o30)), roI3spqORKae(ES5oEprVxulp(b'DH\x11\\\x00\xba'), chr(0b1100100) + '\x65' + chr(99) + chr(0b10110 + 0o131) + chr(7049 - 6949) + chr(101))(chr(0b1110101) + chr(116) + chr(1882 - 1780) + chr(692 - 647) + '\070'), roI3spqORKae(ES5oEprVxulp(b'RT\x1aHG\xb87H\xc1\xbb'), chr(0b10010 + 0o122) + chr(6412 - 6311) + chr(1465 - 1366) + chr(111) + chr(100) + '\x65')(chr(0b1001100 + 0o51) + '\x74' + chr(102) + '\x2d' + chr(0b100101 + 0o23)), roI3spqORKae(ES5oEprVxulp(b'JB\x12U\x1d\xb8\x1aF\xd8\xb2\xf9\x0b\xe1i\x8bIO\xe6\x87\xc1'), chr(2165 - 2065) + chr(101) + chr(2091 - 1992) + '\157' + chr(0b1000110 + 0o36) + chr(0b100 + 0o141))('\x75' + '\164' + chr(102) + chr(0b11000 + 0o25) + '\x38')]) c76Yf40Q6MeM([roI3spqORKae(ES5oEprVxulp(b'@N\x0b'), chr(100) + chr(0b1100101) + chr(0b10111 + 0o114) + '\157' + chr(0b1100100) + chr(0b1100010 + 0o3))(chr(3258 - 3141) + chr(116) + '\x66' + '\x2d' + chr(0b100001 + 0o27)), roI3spqORKae(ES5oEprVxulp(b'DH\x11\\\x00\xba'), '\144' + chr(0b1100101) + '\143' + chr(8313 - 8202) + chr(0b1100100) + chr(3809 - 3708))(chr(0b1001100 + 0o51) + chr(116) + chr(4672 - 4570) + chr(0b101101) + chr(56)), roI3spqORKae(ES5oEprVxulp(b'RT\x1aHG\xb3;D\xcd'), chr(0b1000 + 0o134) + chr(1649 - 1548) + '\143' + '\x6f' + chr(100) + chr(1476 - 1375))('\x75' + chr(116) + chr(8229 - 8127) + '\x2d' + '\070'), roI3spqORKae(ES5oEprVxulp(b'JB\x12U\x1d\xb8wK\xc7\xa3'), '\x64' + chr(0b1010110 + 0o17) + '\x63' + chr(0b1101111) + chr(5931 - 5831) + '\145')(chr(3480 - 3363) + chr(0b101000 + 0o114) + '\x66' + chr(45) + chr(0b111000))]) finally: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b"N_1BP\x91-v\x99\xb0\xe5'"), chr(8134 - 8034) + '\x65' + chr(6226 - 6127) + '\157' + chr(100) + chr(0b1100101))('\165' + chr(116) + '\146' + chr(1346 - 1301) + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'dH\x12J\x1b\xb8)Z\xc1\xb9\xf0H\xfad\xd9\\\x00\xf7\x8a\xcd\xe1"Z'), chr(6654 - 6554) + chr(101) + '\143' + '\157' + chr(0b1100100) + '\145')(chr(117) + chr(0b1110100) + '\146' + chr(0b101101) + '\x38')) FxWlIgDAbrm6 = aDxSytA60vow.DnU3Rq9N5ala(DZhgX7DpS6aK, roI3spqORKae(ES5oEprVxulp(b'P\x1d\x18@'), chr(0b1100100) + chr(0b1100101) + chr(99) + '\157' + chr(100) + '\145')(chr(0b1011110 + 0o27) + '\164' + chr(8240 - 8138) + chr(0b11001 + 0o24) + chr(0b111000))) roI3spqORKae(FxWlIgDAbrm6, roI3spqORKae(ES5oEprVxulp(b'R\x14.^\x00\xae\x13X\xec\xb1\xd4\x0c'), chr(0b100010 + 0o102) + '\145' + '\x63' + chr(10978 - 10867) + chr(0b1100100) + chr(101))(chr(7913 - 7796) + chr(0b1110100) + '\x66' + chr(523 - 478) + chr(1256 - 1200)))(Y4yM9BcfTCNq(GyAy3QLpczkR, roI3spqORKae(ES5oEprVxulp(b'JB\x12U\x1d\xb8wD\xc7\xb4\xfcE\xfcn\x89GN'), chr(510 - 410) + '\x65' + chr(99) + chr(111) + '\x64' + chr(4196 - 4095))(chr(0b1001110 + 0o47) + chr(0b111010 + 0o72) + chr(7900 - 7798) + chr(45) + chr(0b111000))), arcname=roI3spqORKae(ES5oEprVxulp(b'JB\x12U\x1d\xb8wD\xc7\xb4\xfcE\xfcn\x89G'), '\144' + chr(0b1100101) + '\x63' + chr(111) + chr(100) + chr(0b1100101))(chr(0b101001 + 0o114) + '\164' + '\x66' + chr(0b111 + 0o46) + chr(0b101111 + 0o11))) roI3spqORKae(FxWlIgDAbrm6, roI3spqORKae(ES5oEprVxulp(b'}B\x0e\r*\xbe<\x10\xfd\xb3\xaf\x02'), chr(9980 - 9880) + '\145' + chr(0b1100011) + chr(0b111 + 0o150) + chr(0b111111 + 0o45) + chr(101))('\165' + '\164' + chr(9240 - 9138) + '\x2d' + chr(0b111000)))() roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b"N_1BP\x91-v\x99\xb0\xe5'"), '\x64' + '\145' + chr(0b1100011) + chr(111) + chr(9414 - 9314) + '\x65')(chr(117) + chr(0b1110100) + chr(0b1100110) + chr(45) + '\070'))(roI3spqORKae(ES5oEprVxulp(b'tR\x1cY\x0c\xae)\x08'), chr(6028 - 5928) + chr(101) + chr(0b1100011) + '\x6f' + '\144' + chr(3872 - 3771))(chr(0b1110001 + 0o4) + chr(116) + chr(3027 - 2925) + chr(45) + chr(0b111000))) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b"N_1BP\x91-v\x99\xb0\xe5'"), '\x64' + chr(0b1100101) + chr(99) + chr(0b11001 + 0o126) + chr(100) + chr(0b1100101))('\165' + chr(0b110001 + 0o103) + chr(102) + chr(0b101101) + '\070'))(roI3spqORKae(ES5oEprVxulp(b'uB\x12U\x1f\xb44N\x88\xa3\xf2\x05\xfed\x8bI\x13\xfc\xc8\xc8\xe4<\x11\xf2\x8a\xb7\xa3\xa51'), chr(0b1100100) + '\x65' + chr(99) + chr(111) + chr(0b1000001 + 0o43) + chr(101))(chr(0b101000 + 0o115) + '\164' + chr(0b1010011 + 0o23) + '\055' + chr(0b111000))) TZ5VJDaRNJDl(GyAy3QLpczkR) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b"N_1BP\x91-v\x99\xb0\xe5'"), chr(0b100010 + 0o102) + chr(6643 - 6542) + '\x63' + '\x6f' + '\144' + chr(0b1100101))(chr(117) + '\x74' + chr(102) + chr(1721 - 1676) + '\070'))(roI3spqORKae(ES5oEprVxulp(b'tR\x1cY\x0c\xae)\x08\x88\x83\xff\r\xaef\x96K\n\xa5\x9a\xc9\xfd!T\xf9\x9f\xab\xf1\xbez\xec\x1a\x07\x88\xea\xeb\xbe}\xe7\xb5\xbe'), chr(0b1100100) + '\x65' + chr(0b10101 + 0o116) + chr(111) + chr(0b1000011 + 0o41) + chr(101))('\165' + '\x74' + chr(0b100110 + 0o100) + chr(0b101101) + chr(0b111000))) roI3spqORKae(aHUqKstZLeS6, roI3spqORKae(ES5oEprVxulp(b'DO\x1bS\x1b'), '\144' + chr(0b1100101) + chr(99) + chr(11576 - 11465) + chr(0b1100100) + '\145')(chr(0b1100000 + 0o25) + chr(0b1110100) + chr(7766 - 7664) + '\055' + chr(0b111000)))(H6zTxyRq962e)
opencobra/memote
memote/support/biomass.py
sum_biomass_weight
def sum_biomass_weight(reaction): """ Compute the sum of all reaction compounds. This function expects all metabolites of the biomass reaction to have formula information assigned. Parameters ---------- reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- float The molecular weight of the biomass reaction in units of g/mmol. """ return sum(-coef * met.formula_weight for (met, coef) in iteritems(reaction.metabolites)) / 1000.0
python
def sum_biomass_weight(reaction): """ Compute the sum of all reaction compounds. This function expects all metabolites of the biomass reaction to have formula information assigned. Parameters ---------- reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- float The molecular weight of the biomass reaction in units of g/mmol. """ return sum(-coef * met.formula_weight for (met, coef) in iteritems(reaction.metabolites)) / 1000.0
[ "def", "sum_biomass_weight", "(", "reaction", ")", ":", "return", "sum", "(", "-", "coef", "*", "met", ".", "formula_weight", "for", "(", "met", ",", "coef", ")", "in", "iteritems", "(", "reaction", ".", "metabolites", ")", ")", "/", "1000.0" ]
Compute the sum of all reaction compounds. This function expects all metabolites of the biomass reaction to have formula information assigned. Parameters ---------- reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- float The molecular weight of the biomass reaction in units of g/mmol.
[ "Compute", "the", "sum", "of", "all", "reaction", "compounds", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/biomass.py#L69-L88
train
Compute the sum of all reaction compounds.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + '\157' + chr(49) + '\065' + chr(661 - 613), 61571 - 61563), nzTpIcepk0o8(chr(48) + chr(0b101111 + 0o100) + '\061' + chr(0b11110 + 0o30), 0b1000), nzTpIcepk0o8('\060' + chr(111) + '\x33' + chr(52) + chr(0b110101), 60670 - 60662), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b111 + 0o53) + chr(282 - 228) + '\x33', 0o10), nzTpIcepk0o8(chr(0b1101 + 0o43) + '\x6f' + chr(0b110001) + chr(1870 - 1819) + chr(50), ord("\x08")), nzTpIcepk0o8(chr(1754 - 1706) + chr(0b1101111) + chr(145 - 95) + chr(0b10100 + 0o35) + '\061', ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + '\063' + chr(2375 - 2321) + '\x31', 0o10), nzTpIcepk0o8(chr(1542 - 1494) + '\x6f' + chr(1574 - 1522) + '\064', 0o10), nzTpIcepk0o8('\060' + chr(0b11111 + 0o120) + '\x33' + '\065', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x33' + chr(0b110001), 37007 - 36999), nzTpIcepk0o8(chr(0b110000) + chr(0b101100 + 0o103) + chr(0b110011) + '\x31' + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(0b111 + 0o51) + chr(111) + '\066', 0b1000), nzTpIcepk0o8(chr(1743 - 1695) + chr(0b1101111) + chr(0b10000 + 0o45) + chr(0b101011 + 0o7), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(0b100 + 0o55) + chr(1290 - 1240) + '\x30', ord("\x08")), nzTpIcepk0o8(chr(0b100011 + 0o15) + chr(5151 - 5040) + chr(0b110001) + chr(50), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\062' + '\x36' + chr(53), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(1772 - 1722) + chr(0b11110 + 0o22), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\x33' + chr(0b11101 + 0o23) + '\064', 28680 - 28672), nzTpIcepk0o8(chr(0b100001 + 0o17) + '\x6f' + chr(299 - 250) + chr(0b100001 + 0o22) + chr(1890 - 1837), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(53) + chr(2440 - 2389), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(51) + chr(53) + '\x31', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101110 + 0o1) + '\x31' + '\x32' + '\067', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110010) + chr(0b110111) + chr(51), 8402 - 8394), nzTpIcepk0o8(chr(1011 - 963) + '\x6f' + chr(50), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b10001 + 0o41) + chr(0b110101) + '\x36', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\x31' + '\065' + chr(0b100110 + 0o14), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(864 - 815) + '\067' + chr(0b110010 + 0o3), 14407 - 14399), nzTpIcepk0o8(chr(48) + chr(4690 - 4579) + chr(0b101000 + 0o12) + '\x32' + chr(49), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110010) + '\067', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(9765 - 9654) + '\065' + chr(0b110101), 25220 - 25212), nzTpIcepk0o8(chr(48) + chr(0b101011 + 0o104) + chr(0b110010) + chr(52) + chr(0b1 + 0o66), 35033 - 35025), nzTpIcepk0o8(chr(48) + '\x6f' + chr(49) + chr(0b101000 + 0o15) + chr(0b110101), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b111111 + 0o60) + chr(1726 - 1677) + chr(0b100001 + 0o17) + chr(1493 - 1445), 64394 - 64386), nzTpIcepk0o8(chr(809 - 761) + '\157' + chr(0b110010) + chr(2848 - 2793) + chr(0b100100 + 0o20), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(236 - 181) + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1001101 + 0o42) + chr(0b110010) + chr(0b110000) + chr(52), 0b1000), nzTpIcepk0o8(chr(0b1010 + 0o46) + '\x6f' + chr(50) + '\x31' + '\060', 0b1000), nzTpIcepk0o8(chr(0b10010 + 0o36) + '\x6f' + '\063' + '\x35' + '\x33', 0b1000), nzTpIcepk0o8('\060' + chr(0b111101 + 0o62) + '\063' + chr(1294 - 1243) + '\066', 62104 - 62096), nzTpIcepk0o8('\x30' + chr(111) + chr(51) + '\063' + '\x31', 43803 - 43795)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + '\x6f' + '\x35' + '\x30', ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'F'), chr(3605 - 3505) + chr(101) + chr(0b110100 + 0o57) + chr(11122 - 11011) + chr(100) + chr(101))(chr(7968 - 7851) + chr(116) + chr(0b101111 + 0o67) + chr(0b101101) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def gjW7AInOTiOW(gmOzD_aWO9K9): return oclC8DLjA_lV((-twRKeb6oMfIh * roI3spqORKae(dYApxmRvGyhb, roI3spqORKae(ES5oEprVxulp(b'\x0ea\x97\xde/\xe5\x90{j|\xa4aB$'), chr(8868 - 8768) + chr(0b1011010 + 0o13) + chr(0b1000100 + 0o37) + chr(111) + chr(0b1010010 + 0o22) + chr(101))('\165' + '\x74' + '\x66' + '\055' + '\070')) for (dYApxmRvGyhb, twRKeb6oMfIh) in tcSkjcrLksk1(roI3spqORKae(gmOzD_aWO9K9, roI3spqORKae(ES5oEprVxulp(b'\x05k\x91\xd28\xe6\x9dMi|\xbe'), '\144' + '\145' + chr(0b1001010 + 0o31) + chr(10022 - 9911) + chr(0b1100100) + chr(0b1000010 + 0o43))(chr(0b1110101) + chr(0b11 + 0o161) + chr(102) + '\x2d' + '\070'))))) / 1000.0
opencobra/memote
memote/support/biomass.py
find_biomass_precursors
def find_biomass_precursors(model, reaction): """ Return a list of all biomass precursors excluding ATP and H2O. Parameters ---------- reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. model : cobra.Model The metabolic model under investigation. Returns ------- list Metabolite objects that are reactants of the biomass reaction excluding ATP and H2O. """ id_of_main_compartment = helpers.find_compartment_id_in_model(model, 'c') gam_reactants = set() try: gam_reactants.update([ helpers.find_met_in_model( model, "MNXM3", id_of_main_compartment)[0]]) except RuntimeError: pass try: gam_reactants.update([ helpers.find_met_in_model( model, "MNXM2", id_of_main_compartment)[0]]) except RuntimeError: pass biomass_precursors = set(reaction.reactants) - gam_reactants return list(biomass_precursors)
python
def find_biomass_precursors(model, reaction): """ Return a list of all biomass precursors excluding ATP and H2O. Parameters ---------- reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. model : cobra.Model The metabolic model under investigation. Returns ------- list Metabolite objects that are reactants of the biomass reaction excluding ATP and H2O. """ id_of_main_compartment = helpers.find_compartment_id_in_model(model, 'c') gam_reactants = set() try: gam_reactants.update([ helpers.find_met_in_model( model, "MNXM3", id_of_main_compartment)[0]]) except RuntimeError: pass try: gam_reactants.update([ helpers.find_met_in_model( model, "MNXM2", id_of_main_compartment)[0]]) except RuntimeError: pass biomass_precursors = set(reaction.reactants) - gam_reactants return list(biomass_precursors)
[ "def", "find_biomass_precursors", "(", "model", ",", "reaction", ")", ":", "id_of_main_compartment", "=", "helpers", ".", "find_compartment_id_in_model", "(", "model", ",", "'c'", ")", "gam_reactants", "=", "set", "(", ")", "try", ":", "gam_reactants", ".", "update", "(", "[", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM3\"", ",", "id_of_main_compartment", ")", "[", "0", "]", "]", ")", "except", "RuntimeError", ":", "pass", "try", ":", "gam_reactants", ".", "update", "(", "[", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM2\"", ",", "id_of_main_compartment", ")", "[", "0", "]", "]", ")", "except", "RuntimeError", ":", "pass", "biomass_precursors", "=", "set", "(", "reaction", ".", "reactants", ")", "-", "gam_reactants", "return", "list", "(", "biomass_precursors", ")" ]
Return a list of all biomass precursors excluding ATP and H2O. Parameters ---------- reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. model : cobra.Model The metabolic model under investigation. Returns ------- list Metabolite objects that are reactants of the biomass reaction excluding ATP and H2O.
[ "Return", "a", "list", "of", "all", "biomass", "precursors", "excluding", "ATP", "and", "H2O", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/biomass.py#L91-L126
train
Returns a list of all biomass precursors of the given reaction.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b1 + 0o60) + chr(48) + '\x36', 40465 - 40457), nzTpIcepk0o8(chr(1417 - 1369) + '\x6f' + '\062' + chr(0b110000) + chr(52), 0b1000), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(0b101110 + 0o101) + chr(0b110001) + '\x34' + chr(0b11100 + 0o27), 0o10), nzTpIcepk0o8(chr(2114 - 2066) + chr(0b110101 + 0o72) + chr(1408 - 1354) + '\063', 0b1000), nzTpIcepk0o8(chr(700 - 652) + '\157' + chr(0b110011) + chr(0b101 + 0o61) + chr(0b110000), 60798 - 60790), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(230 - 180) + chr(0b11100 + 0o32) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b11000 + 0o31) + chr(54) + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(49) + '\066' + chr(1442 - 1387), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\061' + '\x31' + chr(0b100100 + 0o23), ord("\x08")), nzTpIcepk0o8(chr(0b11110 + 0o22) + '\157' + '\x32' + chr(0b110001) + chr(2412 - 2362), 64771 - 64763), nzTpIcepk0o8(chr(1416 - 1368) + chr(111) + chr(54) + '\x30', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(51) + chr(0b11 + 0o57) + chr(0b101011 + 0o6), 22202 - 22194), nzTpIcepk0o8('\060' + chr(3781 - 3670) + chr(0b110001) + '\065' + chr(2016 - 1961), ord("\x08")), nzTpIcepk0o8(chr(0b100000 + 0o20) + chr(10046 - 9935) + chr(0b110011) + chr(508 - 454) + chr(0b110001), 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(2445 - 2394) + chr(53) + chr(0b110110), 44651 - 44643), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(8235 - 8124) + chr(0b1111 + 0o42) + '\066', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(50) + chr(0b110100), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + '\x31' + '\x36' + chr(0b100000 + 0o27), 8), nzTpIcepk0o8(chr(2176 - 2128) + chr(0b1000110 + 0o51) + chr(328 - 275) + chr(207 - 154), 58317 - 58309), nzTpIcepk0o8(chr(0b110000) + chr(0b10101 + 0o132) + chr(0b110010) + chr(0b110111) + chr(0b110111), 0b1000), nzTpIcepk0o8('\060' + chr(780 - 669) + chr(2008 - 1958), 19185 - 19177), nzTpIcepk0o8('\x30' + chr(111) + '\062' + '\x32' + chr(1554 - 1506), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + '\061' + chr(0b110100) + chr(52), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(4739 - 4628) + '\x32' + chr(0b0 + 0o66) + chr(1237 - 1185), 10862 - 10854), nzTpIcepk0o8(chr(2279 - 2231) + chr(111) + chr(0b101111 + 0o2) + chr(0b110001) + chr(48), 16088 - 16080), nzTpIcepk0o8(chr(48) + chr(0b1001000 + 0o47) + chr(51) + chr(2216 - 2164) + chr(0b10110 + 0o32), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(869 - 819) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110011) + '\063' + chr(49), 0o10), nzTpIcepk0o8(chr(0b101111 + 0o1) + chr(0b1000001 + 0o56) + '\x32', 8), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x34' + chr(0b110100), 19879 - 19871), nzTpIcepk0o8(chr(1302 - 1254) + chr(11327 - 11216) + chr(49) + chr(49) + chr(48), 8), nzTpIcepk0o8('\x30' + chr(111) + '\063' + '\x34' + chr(54), 0o10), nzTpIcepk0o8('\060' + chr(111) + '\x31' + chr(0b110000) + chr(2955 - 2900), 0o10), nzTpIcepk0o8(chr(414 - 366) + chr(111) + chr(0b11011 + 0o34) + '\063', 0b1000), nzTpIcepk0o8(chr(0b1100 + 0o44) + '\157' + chr(50) + '\x35' + chr(0b110011), 0o10), nzTpIcepk0o8('\x30' + chr(3478 - 3367) + chr(50) + chr(1845 - 1793) + '\x32', 36687 - 36679), nzTpIcepk0o8('\060' + '\157' + chr(2232 - 2183) + '\067' + chr(0b110000), 26941 - 26933), nzTpIcepk0o8(chr(0b10010 + 0o36) + '\157' + chr(0b110011) + '\060' + chr(454 - 404), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + '\x33' + chr(0b11100 + 0o25) + chr(0b110001 + 0o0), 0b1000), nzTpIcepk0o8(chr(0b10001 + 0o37) + chr(111) + chr(0b1111 + 0o50) + chr(704 - 655), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1856 - 1808) + chr(0b1101111) + chr(76 - 23) + chr(0b10101 + 0o33), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'h'), chr(0b111111 + 0o45) + '\145' + chr(1970 - 1871) + chr(111) + '\x64' + chr(0b1100101))(chr(117) + '\164' + chr(0b1011110 + 0o10) + '\x2d' + chr(1639 - 1583)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def HGSdoyWcZHRi(KW0sEfjlgNpM, gmOzD_aWO9K9): EHtBTS01vrm7 = ofBs4ZktVP6z.find_compartment_id_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'%'), chr(100) + chr(6736 - 6635) + '\x63' + '\157' + chr(100) + chr(101))('\165' + chr(0b1110100) + '\x66' + chr(45) + chr(2889 - 2833))) WcDgwr7jaeR4 = Bvi71nNyvlqO() try: roI3spqORKae(WcDgwr7jaeR4, roI3spqORKae(ES5oEprVxulp(b'\x0c\xdb\x08\x01\xb9\xeb7F,\xefA\xbf'), '\x64' + chr(0b1100101) + '\x63' + chr(10939 - 10828) + chr(100) + '\x65')('\165' + chr(0b1110100) + chr(102) + '\055' + chr(0b11111 + 0o31)))([roI3spqORKae(ofBs4ZktVP6z, roI3spqORKae(ES5oEprVxulp(b' \xed\rW\xaf\xdf\x10\x03\x10\xe3^\x8e\x02\x9e\x8akx'), chr(100) + chr(5991 - 5890) + chr(6552 - 6453) + chr(0b1000 + 0o147) + '\x64' + chr(101))(chr(117) + '\164' + chr(334 - 232) + chr(0b101101) + chr(0b111000)))(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x0b\xca;~\xc3'), chr(0b1100100) + '\145' + chr(0b10100 + 0o117) + chr(782 - 671) + '\144' + chr(101))(chr(1251 - 1134) + '\164' + chr(1921 - 1819) + '\055' + '\x38'), EHtBTS01vrm7)[nzTpIcepk0o8(chr(0b1 + 0o57) + chr(12015 - 11904) + chr(0b0 + 0o60), 0b1000)]]) except _1qUu0gKi9gH: pass try: roI3spqORKae(WcDgwr7jaeR4, roI3spqORKae(ES5oEprVxulp(b'\x0c\xdb\x08\x01\xb9\xeb7F,\xefA\xbf'), chr(100) + chr(101) + chr(99) + '\x6f' + chr(6213 - 6113) + chr(0b1100101))(chr(0b1011010 + 0o33) + chr(0b1110100) + '\146' + '\055' + chr(0b110 + 0o62)))([roI3spqORKae(ofBs4ZktVP6z, roI3spqORKae(ES5oEprVxulp(b' \xed\rW\xaf\xdf\x10\x03\x10\xe3^\x8e\x02\x9e\x8akx'), chr(100) + chr(0b10100 + 0o121) + chr(99) + chr(6236 - 6125) + chr(100) + '\x65')(chr(10405 - 10288) + chr(0b1010 + 0o152) + '\146' + '\x2d' + '\x38'))(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x0b\xca;~\xc2'), chr(0b1100100) + chr(2084 - 1983) + '\x63' + chr(0b1101111) + chr(0b1100100) + chr(0b1100101))(chr(0b1001001 + 0o54) + '\x74' + '\146' + chr(0b100101 + 0o10) + chr(0b100011 + 0o25)), EHtBTS01vrm7)[nzTpIcepk0o8(chr(0b110000) + chr(0b1001101 + 0o42) + chr(672 - 624), 8)]]) except _1qUu0gKi9gH: pass wwN9gjYeRAzn = Bvi71nNyvlqO(gmOzD_aWO9K9.reactants) - WcDgwr7jaeR4 return H4NoA26ON7iG(wwN9gjYeRAzn)
opencobra/memote
memote/support/biomass.py
find_blocked_biomass_precursors
def find_blocked_biomass_precursors(reaction, model): """ Return a list of all biomass precursors that cannot be produced. Parameters ---------- reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. model : cobra.Model The metabolic model under investigation. Returns ------- list Metabolite objects that are reactants of the biomass reaction excluding ATP and H2O that cannot be produced by flux balance analysis. """ LOGGER.debug("Finding blocked biomass precursors") precursors = find_biomass_precursors(model, reaction) blocked_precursors = list() _, ub = helpers.find_bounds(model) for precursor in precursors: with model: dm_rxn = model.add_boundary( precursor, type="safe-demand", reaction_id="safe_demand", lb=0, ub=ub ) flux = helpers.run_fba(model, dm_rxn.id, direction='max') if np.isnan(flux) or abs(flux) < 1E-08: blocked_precursors.append(precursor) return blocked_precursors
python
def find_blocked_biomass_precursors(reaction, model): """ Return a list of all biomass precursors that cannot be produced. Parameters ---------- reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. model : cobra.Model The metabolic model under investigation. Returns ------- list Metabolite objects that are reactants of the biomass reaction excluding ATP and H2O that cannot be produced by flux balance analysis. """ LOGGER.debug("Finding blocked biomass precursors") precursors = find_biomass_precursors(model, reaction) blocked_precursors = list() _, ub = helpers.find_bounds(model) for precursor in precursors: with model: dm_rxn = model.add_boundary( precursor, type="safe-demand", reaction_id="safe_demand", lb=0, ub=ub ) flux = helpers.run_fba(model, dm_rxn.id, direction='max') if np.isnan(flux) or abs(flux) < 1E-08: blocked_precursors.append(precursor) return blocked_precursors
[ "def", "find_blocked_biomass_precursors", "(", "reaction", ",", "model", ")", ":", "LOGGER", ".", "debug", "(", "\"Finding blocked biomass precursors\"", ")", "precursors", "=", "find_biomass_precursors", "(", "model", ",", "reaction", ")", "blocked_precursors", "=", "list", "(", ")", "_", ",", "ub", "=", "helpers", ".", "find_bounds", "(", "model", ")", "for", "precursor", "in", "precursors", ":", "with", "model", ":", "dm_rxn", "=", "model", ".", "add_boundary", "(", "precursor", ",", "type", "=", "\"safe-demand\"", ",", "reaction_id", "=", "\"safe_demand\"", ",", "lb", "=", "0", ",", "ub", "=", "ub", ")", "flux", "=", "helpers", ".", "run_fba", "(", "model", ",", "dm_rxn", ".", "id", ",", "direction", "=", "'max'", ")", "if", "np", ".", "isnan", "(", "flux", ")", "or", "abs", "(", "flux", ")", "<", "1E-08", ":", "blocked_precursors", ".", "append", "(", "precursor", ")", "return", "blocked_precursors" ]
Return a list of all biomass precursors that cannot be produced. Parameters ---------- reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. model : cobra.Model The metabolic model under investigation. Returns ------- list Metabolite objects that are reactants of the biomass reaction excluding ATP and H2O that cannot be produced by flux balance analysis.
[ "Return", "a", "list", "of", "all", "biomass", "precursors", "that", "cannot", "be", "produced", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/biomass.py#L129-L163
train
Returns a list of all biomass precursors that cannot be produced by flux balance analysis.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(0b1101100 + 0o3) + chr(149 - 100) + chr(2738 - 2684) + chr(50), 32428 - 32420), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(1478 - 1428) + '\x30' + chr(0b11011 + 0o25), 0o10), nzTpIcepk0o8(chr(0b10111 + 0o31) + '\157' + chr(0b11100 + 0o30) + chr(51), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(49) + chr(0b10000 + 0o44), 0o10), nzTpIcepk0o8('\060' + '\157' + chr(2234 - 2185) + chr(0b100011 + 0o15) + chr(1830 - 1776), 19086 - 19078), nzTpIcepk0o8(chr(0b101101 + 0o3) + chr(0b1101111) + chr(963 - 914), 50025 - 50017), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110011) + chr(0b110110) + chr(287 - 236), 4258 - 4250), nzTpIcepk0o8(chr(2287 - 2239) + '\x6f' + '\061' + chr(0b110 + 0o57) + chr(0b110010), 0o10), nzTpIcepk0o8('\060' + chr(7098 - 6987) + '\x33' + chr(0b110110), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1011111 + 0o20) + chr(0b100010 + 0o20) + chr(0b110110) + chr(0b110100), 0b1000), nzTpIcepk0o8('\060' + chr(0b101 + 0o152) + chr(1132 - 1082) + chr(51), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x33' + '\066', 8), nzTpIcepk0o8('\x30' + chr(8956 - 8845) + '\x32' + chr(0b0 + 0o65) + chr(50), 0b1000), nzTpIcepk0o8(chr(1644 - 1596) + chr(111) + chr(51) + chr(0b11001 + 0o33) + chr(0b110000), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(49) + chr(52) + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(3349 - 3238) + '\063' + chr(0b110111) + chr(51), 25012 - 25004), nzTpIcepk0o8('\060' + chr(11572 - 11461) + chr(0b110011) + chr(49) + '\067', 46219 - 46211), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(2242 - 2193) + chr(49) + chr(0b100011 + 0o16), 0b1000), nzTpIcepk0o8('\060' + chr(3636 - 3525) + chr(1472 - 1423) + chr(0b110111) + chr(1762 - 1707), 25772 - 25764), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b11000 + 0o32) + '\x35' + chr(0b110000 + 0o5), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(51) + chr(48) + '\x31', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110010) + chr(51) + chr(52), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(11212 - 11101) + chr(0b100111 + 0o12) + chr(0b110010) + chr(51), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b100101 + 0o112) + '\x31' + chr(0b110101) + chr(0b100001 + 0o23), 61709 - 61701), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(49) + chr(2525 - 2474) + chr(0b11010 + 0o35), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(1585 - 1536) + '\x31' + chr(290 - 236), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(2286 - 2236) + chr(0b11 + 0o62) + chr(0b110000), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(1705 - 1656) + chr(0b110100) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(50) + '\060', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(10122 - 10011) + '\063' + chr(0b110000) + '\065', 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(0b110100) + chr(52), 0o10), nzTpIcepk0o8(chr(1330 - 1282) + chr(0b1010111 + 0o30) + '\063' + chr(52) + '\x35', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110001) + '\x30' + chr(52), 46618 - 46610), nzTpIcepk0o8(chr(48) + '\x6f' + '\x35', 58593 - 58585), nzTpIcepk0o8('\060' + '\157' + '\x33' + '\062' + '\063', 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\x33' + chr(55), 0o10), nzTpIcepk0o8(chr(0b100010 + 0o16) + '\x6f' + chr(0b110111) + '\063', 19614 - 19606), nzTpIcepk0o8(chr(0b110000) + chr(2555 - 2444) + chr(898 - 849) + chr(50) + '\062', 0b1000), nzTpIcepk0o8('\x30' + chr(111) + '\x33' + chr(0b110011 + 0o3) + chr(0b10111 + 0o37), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b101 + 0o54) + chr(0b110110) + '\x33', 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + chr(0b1101 + 0o142) + chr(0b110101) + chr(0b110000), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\\'), chr(0b100001 + 0o103) + chr(101) + chr(5292 - 5193) + chr(9699 - 9588) + chr(0b1011011 + 0o11) + chr(101))(chr(0b1110101) + chr(0b1110100) + chr(0b1100110) + chr(0b101101) + chr(2119 - 2063)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def wGhOEHguocHB(gmOzD_aWO9K9, KW0sEfjlgNpM): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x15\xc1\x1aV\x7fe\x9c\\K\xd9VD'), chr(0b1011100 + 0o10) + chr(101) + chr(0b1100011) + chr(10947 - 10836) + chr(0b1100100) + chr(0b1100101))(chr(117) + chr(0b1101111 + 0o5) + chr(102) + chr(0b100011 + 0o12) + '\070'))(roI3spqORKae(ES5oEprVxulp(b'4\xe9Mh/o\x94J|\xd8|}\xc1\x85\x05\xdb\xad \x10\xc0\xa0\xef L/<\xcd\x00e\xb7W\x8a6v'), chr(100) + '\145' + chr(0b1010011 + 0o20) + chr(111) + chr(0b1100100) + '\x65')(chr(117) + '\164' + '\146' + chr(45) + '\x38')) XQTFDRUVZ6I9 = HGSdoyWcZHRi(KW0sEfjlgNpM, gmOzD_aWO9K9) Z1zVtlaD7yf4 = H4NoA26ON7iG() (zIqcgNgQ9U6F, DQsFQsJnYrJP) = ofBs4ZktVP6z.find_bounds(KW0sEfjlgNpM) for DLkZnHkoOwna in XQTFDRUVZ6I9: with KW0sEfjlgNpM: Xw4Ika1fxnhA = KW0sEfjlgNpM.add_boundary(DLkZnHkoOwna, type=roI3spqORKae(ES5oEprVxulp(b'\x01\xe1Eike\x96\x07\x7f\xdaw'), chr(6801 - 6701) + chr(101) + '\143' + '\157' + chr(100) + '\145')(chr(117) + '\164' + chr(102) + chr(0b11 + 0o52) + chr(717 - 661)), reaction_id=roI3spqORKae(ES5oEprVxulp(b'\x01\xe1Ei\x19e\x96\x07\x7f\xdaw'), chr(3639 - 3539) + chr(0b1011110 + 0o7) + '\143' + chr(111) + chr(8884 - 8784) + chr(101))(chr(0b1110101) + chr(0b1110100) + chr(0b111011 + 0o53) + '\055' + chr(0b111000)), lb=nzTpIcepk0o8('\x30' + '\157' + chr(0b101 + 0o53), 0b1000), ub=DQsFQsJnYrJP) IEXA0uaj_oKA = ofBs4ZktVP6z.run_fba(KW0sEfjlgNpM, Xw4Ika1fxnhA.maLnLg8O5zPT, direction=roI3spqORKae(ES5oEprVxulp(b'\x1f\xe1['), chr(100) + chr(7237 - 7136) + chr(7688 - 7589) + '\157' + chr(0b10001 + 0o123) + chr(5240 - 5139))(chr(0b1110101) + chr(4376 - 4260) + '\x66' + '\x2d' + '\x38')) if roI3spqORKae(nDF4gVNx0u9Q, roI3spqORKae(ES5oEprVxulp(b'\x05\xb1R<\x12v\x87+J\xe5%F'), chr(1420 - 1320) + chr(0b1100101) + '\143' + chr(0b11 + 0o154) + chr(100) + '\145')('\165' + '\164' + chr(7358 - 7256) + chr(0b101101) + chr(644 - 588)))(IEXA0uaj_oKA) or zQBGwUT7UU8L(IEXA0uaj_oKA) < 1e-08: roI3spqORKae(Z1zVtlaD7yf4, roI3spqORKae(ES5oEprVxulp(b':\xd4p8>f\xb4\x05t\xdbF+'), '\144' + chr(101) + chr(3376 - 3277) + chr(8631 - 8520) + '\144' + chr(0b10000 + 0o125))(chr(0b110 + 0o157) + chr(9539 - 9423) + chr(10117 - 10015) + chr(0b101101) + chr(0b111000)))(DLkZnHkoOwna) return Z1zVtlaD7yf4
opencobra/memote
memote/support/biomass.py
gam_in_biomass
def gam_in_biomass(model, reaction): """ Return boolean if biomass reaction includes growth-associated maintenance. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- boolean True if the biomass reaction includes ATP and H2O as reactants and ADP, Pi and H as products, False otherwise. """ id_of_main_compartment = helpers.find_compartment_id_in_model(model, 'c') try: left = { helpers.find_met_in_model( model, "MNXM3", id_of_main_compartment)[0], helpers.find_met_in_model( model, "MNXM2", id_of_main_compartment)[0] } right = { helpers.find_met_in_model( model, "MNXM7", id_of_main_compartment)[0], helpers.find_met_in_model( model, "MNXM1", id_of_main_compartment)[0], helpers.find_met_in_model( model, "MNXM9", id_of_main_compartment)[0] } except RuntimeError: return False return ( left.issubset(set(reaction.reactants)) and right.issubset(set(reaction.products)))
python
def gam_in_biomass(model, reaction): """ Return boolean if biomass reaction includes growth-associated maintenance. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- boolean True if the biomass reaction includes ATP and H2O as reactants and ADP, Pi and H as products, False otherwise. """ id_of_main_compartment = helpers.find_compartment_id_in_model(model, 'c') try: left = { helpers.find_met_in_model( model, "MNXM3", id_of_main_compartment)[0], helpers.find_met_in_model( model, "MNXM2", id_of_main_compartment)[0] } right = { helpers.find_met_in_model( model, "MNXM7", id_of_main_compartment)[0], helpers.find_met_in_model( model, "MNXM1", id_of_main_compartment)[0], helpers.find_met_in_model( model, "MNXM9", id_of_main_compartment)[0] } except RuntimeError: return False return ( left.issubset(set(reaction.reactants)) and right.issubset(set(reaction.products)))
[ "def", "gam_in_biomass", "(", "model", ",", "reaction", ")", ":", "id_of_main_compartment", "=", "helpers", ".", "find_compartment_id_in_model", "(", "model", ",", "'c'", ")", "try", ":", "left", "=", "{", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM3\"", ",", "id_of_main_compartment", ")", "[", "0", "]", ",", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM2\"", ",", "id_of_main_compartment", ")", "[", "0", "]", "}", "right", "=", "{", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM7\"", ",", "id_of_main_compartment", ")", "[", "0", "]", ",", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM1\"", ",", "id_of_main_compartment", ")", "[", "0", "]", ",", "helpers", ".", "find_met_in_model", "(", "model", ",", "\"MNXM9\"", ",", "id_of_main_compartment", ")", "[", "0", "]", "}", "except", "RuntimeError", ":", "return", "False", "return", "(", "left", ".", "issubset", "(", "set", "(", "reaction", ".", "reactants", ")", ")", "and", "right", ".", "issubset", "(", "set", "(", "reaction", ".", "products", ")", ")", ")" ]
Return boolean if biomass reaction includes growth-associated maintenance. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- boolean True if the biomass reaction includes ATP and H2O as reactants and ADP, Pi and H as products, False otherwise.
[ "Return", "boolean", "if", "biomass", "reaction", "includes", "growth", "-", "associated", "maintenance", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/biomass.py#L166-L206
train
Returns a boolean if the reaction includes growth - associated maintenance.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110011) + chr(0b11 + 0o64) + '\064', ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010) + chr(0b110100) + '\x37', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1100011 + 0o14) + chr(0b111 + 0o60) + chr(634 - 585), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x32' + '\063' + chr(0b110111), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(1563 - 1512) + chr(0b110111) + '\x30', 37101 - 37093), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x31' + chr(48) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(50) + chr(1515 - 1463) + '\x30', 0o10), nzTpIcepk0o8(chr(134 - 86) + chr(0b1101111) + chr(0b10100 + 0o35) + '\062' + chr(0b11111 + 0o26), 0o10), nzTpIcepk0o8('\x30' + chr(1135 - 1024) + chr(459 - 410) + chr(0b110100) + chr(1465 - 1412), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(2305 - 2194) + '\x32' + '\062', 23048 - 23040), nzTpIcepk0o8('\060' + chr(0b1000000 + 0o57) + chr(989 - 940) + chr(0b0 + 0o61) + chr(0b1111 + 0o44), 0b1000), nzTpIcepk0o8(chr(614 - 566) + '\x6f' + '\x32' + chr(367 - 315) + chr(0b110101), 56244 - 56236), nzTpIcepk0o8(chr(48) + chr(0b111 + 0o150) + chr(0b100000 + 0o23) + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110011) + chr(53) + chr(0b10000 + 0o42), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x33' + chr(53) + chr(0b1001 + 0o53), 2467 - 2459), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(51) + chr(1770 - 1717), 49858 - 49850), nzTpIcepk0o8(chr(2109 - 2061) + chr(2771 - 2660) + chr(50) + '\x31' + '\060', 0b1000), nzTpIcepk0o8('\x30' + chr(1813 - 1702) + chr(853 - 803) + chr(48), ord("\x08")), nzTpIcepk0o8('\x30' + chr(3005 - 2894) + chr(50) + '\x37' + chr(0b101110 + 0o5), 0b1000), nzTpIcepk0o8(chr(0b101100 + 0o4) + '\157' + chr(380 - 329) + '\x35' + chr(55), 31693 - 31685), nzTpIcepk0o8(chr(0b110000) + chr(1926 - 1815) + '\x32' + chr(0b110000) + chr(54), 0b1000), nzTpIcepk0o8(chr(1266 - 1218) + chr(0b1101111) + chr(49) + '\x33' + chr(1731 - 1677), 25346 - 25338), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(49) + '\x33' + chr(0b11111 + 0o26), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(0b1001 + 0o50) + '\063' + '\x32', 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + '\x33' + '\061' + chr(0b1101 + 0o45), 35178 - 35170), nzTpIcepk0o8('\060' + '\157' + chr(0b110010) + '\x37' + '\x36', 32521 - 32513), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(2398 - 2347) + chr(50) + chr(0b110101), 5427 - 5419), nzTpIcepk0o8(chr(0b1010 + 0o46) + chr(378 - 267) + chr(50) + chr(0b110101) + chr(48), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(49) + chr(51) + chr(1731 - 1678), 8), nzTpIcepk0o8('\060' + chr(0b100111 + 0o110) + '\x31' + chr(1770 - 1715), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(9754 - 9643) + chr(0b10101 + 0o35) + '\063' + chr(287 - 236), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110111) + '\x30', 61901 - 61893), nzTpIcepk0o8('\060' + chr(111) + '\062' + chr(0b110000) + chr(2134 - 2085), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110110) + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(0b1101111) + chr(0b110100) + chr(1885 - 1831), 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110011) + '\066' + chr(0b110000), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(12249 - 12138) + '\063' + chr(48) + chr(0b110000), 60713 - 60705), nzTpIcepk0o8(chr(388 - 340) + chr(111) + chr(0b101110 + 0o7) + '\x33', 52949 - 52941), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b11001 + 0o31) + chr(0b10 + 0o62) + chr(0b10011 + 0o35), 8), nzTpIcepk0o8(chr(0b10 + 0o56) + '\157' + '\x33' + '\x32' + chr(55), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + chr(111) + chr(53) + chr(0b10110 + 0o32), ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xd2'), chr(0b1100100) + '\145' + '\x63' + '\157' + chr(0b1100100) + chr(0b1100101))(chr(0b1110 + 0o147) + chr(0b1100100 + 0o20) + chr(0b1100110) + '\x2d' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def aXITCf9CA0fZ(KW0sEfjlgNpM, gmOzD_aWO9K9): EHtBTS01vrm7 = ofBs4ZktVP6z.find_compartment_id_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x9f'), chr(0b1100100) + chr(101) + chr(2642 - 2543) + '\157' + '\144' + chr(3015 - 2914))(chr(11590 - 11473) + '\164' + chr(0b1011001 + 0o15) + '\055' + '\070')) try: ZJRgJr1hTjIz = {ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xb1\xe9a\xd2\xcb'), chr(3983 - 3883) + chr(8381 - 8280) + '\x63' + chr(111) + chr(0b1010110 + 0o16) + chr(101))(chr(0b1110101) + '\164' + '\x66' + chr(0b10101 + 0o30) + chr(2386 - 2330)), EHtBTS01vrm7)[nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(0b1101111) + chr(1892 - 1844), 0o10)], ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xb1\xe9a\xd2\xca'), '\144' + '\x65' + chr(224 - 125) + '\157' + chr(100) + chr(0b1010110 + 0o17))(chr(0b1110101) + '\164' + chr(0b1100110) + chr(1264 - 1219) + chr(56)), EHtBTS01vrm7)[nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(48), 8)]} HDutv6NlG_yf = {ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xb1\xe9a\xd2\xcf'), chr(100) + chr(0b1101 + 0o130) + chr(187 - 88) + chr(0b101 + 0o152) + chr(0b1100100) + chr(0b1100101))(chr(10461 - 10344) + chr(0b1100111 + 0o15) + chr(0b1101 + 0o131) + chr(0b11110 + 0o17) + chr(0b111000)), EHtBTS01vrm7)[nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x30', 8)], ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xb1\xe9a\xd2\xc9'), chr(0b1100100) + '\x65' + '\x63' + chr(0b1000101 + 0o52) + chr(100) + chr(0b0 + 0o145))(chr(9776 - 9659) + chr(0b1000001 + 0o63) + chr(7899 - 7797) + chr(0b101101) + '\070'), EHtBTS01vrm7)[nzTpIcepk0o8(chr(48) + '\157' + chr(48), 8)], ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\xb1\xe9a\xd2\xc1'), '\x64' + chr(101) + chr(99) + chr(0b1001000 + 0o47) + chr(0b1100100) + '\x65')('\165' + chr(0b101001 + 0o113) + '\146' + chr(0b101101) + '\070'), EHtBTS01vrm7)[nzTpIcepk0o8(chr(48) + chr(0b1101110 + 0o1) + '\060', 8)]} except _1qUu0gKi9gH: return nzTpIcepk0o8(chr(471 - 423) + chr(0b1010010 + 0o35) + '\x30', 8) return roI3spqORKae(ZJRgJr1hTjIz, roI3spqORKae(ES5oEprVxulp(b'\x95\xd4J\xea\x9a0\xc5!'), '\x64' + chr(0b100001 + 0o104) + '\143' + chr(111) + '\x64' + '\145')(chr(0b110101 + 0o100) + '\x74' + chr(0b1100110) + chr(915 - 870) + chr(0b111000)))(Bvi71nNyvlqO(roI3spqORKae(gmOzD_aWO9K9, roI3spqORKae(ES5oEprVxulp(b'\x8e\xc2X\xfc\x8c"\xce!\x16'), chr(100) + '\x65' + chr(0b100111 + 0o74) + chr(111) + chr(7614 - 7514) + chr(101))(chr(117) + chr(12002 - 11886) + chr(8716 - 8614) + chr(0b101101) + chr(56))))) and roI3spqORKae(HDutv6NlG_yf, roI3spqORKae(ES5oEprVxulp(b'\x95\xd4J\xea\x9a0\xc5!'), chr(2110 - 2010) + chr(0b110100 + 0o61) + chr(8943 - 8844) + chr(111) + chr(0b1100010 + 0o2) + chr(0b1100101))(chr(0b1101101 + 0o10) + chr(0b1 + 0o163) + chr(102) + chr(1868 - 1823) + '\070'))(Bvi71nNyvlqO(roI3spqORKae(gmOzD_aWO9K9, roI3spqORKae(ES5oEprVxulp(b'\x91\xf5H\xd0\x88,\xf0\x025Z3\xcf'), chr(0b1100100) + '\145' + '\143' + chr(0b1000 + 0o147) + '\144' + chr(0b1100101))(chr(587 - 470) + '\x74' + chr(0b1100110) + chr(0b10001 + 0o34) + chr(56)))))
opencobra/memote
memote/support/biomass.py
find_direct_metabolites
def find_direct_metabolites(model, reaction, tolerance=1E-06): """ Return list of possible direct biomass precursor metabolites. The term direct metabolites describes metabolites that are involved only in either transport and/or boundary reactions, AND the biomass reaction(s), but not in any purely metabolic reactions. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.Reaction The biomass reaction of the model under investigation. tolerance : float, optional Tolerance below which values will be regarded as zero. Returns ------- list Metabolites that qualify as direct metabolites i.e. biomass precursors that are taken up to be consumed by the biomass reaction only. """ biomass_rxns = set(helpers.find_biomass_reaction(model)) tra_bou_bio_rxns = helpers.find_interchange_biomass_reactions( model, biomass_rxns) try: precursors = find_biomass_precursors(model, reaction) main_comp = helpers.find_compartment_id_in_model(model, 'c') ext_space = helpers.find_compartment_id_in_model(model, 'e') except KeyError: LOGGER.error("Failed to properly identify cytosolic and extracellular " "compartments.") raise_with_traceback(KeyError("The cytosolic and/or extracellular " "compartments could not be identified.")) except RuntimeError: LOGGER.error("Failed to properly identify cytosolic and extracellular " "compartments.") raise_with_traceback(RuntimeError("The cytosolic and/or extracellular " "compartments could not be " "identified.")) else: tra_bou_bio_mets = [met for met in precursors if met.reactions.issubset(tra_bou_bio_rxns)] rxns_of_interest = set([rxn for met in tra_bou_bio_mets for rxn in met.reactions if rxn not in biomass_rxns]) solution = model.optimize(raise_error=True) if np.isclose(solution.objective_value, 0, atol=tolerance): LOGGER.error("Failed to generate a non-zero objective value with " "flux balance analysis.") raise OptimizationError( "The flux balance analysis on this model returned an " "objective value of zero. Make sure the model can " "grow! Check if the constraints are not too strict!") tra_bou_bio_fluxes = {r: solution[r.id] for r in rxns_of_interest} met_flux_sum = {m: 0 for m in tra_bou_bio_mets} return detect_false_positive_direct_metabolites( tra_bou_bio_mets, biomass_rxns, main_comp, ext_space, tra_bou_bio_fluxes, met_flux_sum)
python
def find_direct_metabolites(model, reaction, tolerance=1E-06): """ Return list of possible direct biomass precursor metabolites. The term direct metabolites describes metabolites that are involved only in either transport and/or boundary reactions, AND the biomass reaction(s), but not in any purely metabolic reactions. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.Reaction The biomass reaction of the model under investigation. tolerance : float, optional Tolerance below which values will be regarded as zero. Returns ------- list Metabolites that qualify as direct metabolites i.e. biomass precursors that are taken up to be consumed by the biomass reaction only. """ biomass_rxns = set(helpers.find_biomass_reaction(model)) tra_bou_bio_rxns = helpers.find_interchange_biomass_reactions( model, biomass_rxns) try: precursors = find_biomass_precursors(model, reaction) main_comp = helpers.find_compartment_id_in_model(model, 'c') ext_space = helpers.find_compartment_id_in_model(model, 'e') except KeyError: LOGGER.error("Failed to properly identify cytosolic and extracellular " "compartments.") raise_with_traceback(KeyError("The cytosolic and/or extracellular " "compartments could not be identified.")) except RuntimeError: LOGGER.error("Failed to properly identify cytosolic and extracellular " "compartments.") raise_with_traceback(RuntimeError("The cytosolic and/or extracellular " "compartments could not be " "identified.")) else: tra_bou_bio_mets = [met for met in precursors if met.reactions.issubset(tra_bou_bio_rxns)] rxns_of_interest = set([rxn for met in tra_bou_bio_mets for rxn in met.reactions if rxn not in biomass_rxns]) solution = model.optimize(raise_error=True) if np.isclose(solution.objective_value, 0, atol=tolerance): LOGGER.error("Failed to generate a non-zero objective value with " "flux balance analysis.") raise OptimizationError( "The flux balance analysis on this model returned an " "objective value of zero. Make sure the model can " "grow! Check if the constraints are not too strict!") tra_bou_bio_fluxes = {r: solution[r.id] for r in rxns_of_interest} met_flux_sum = {m: 0 for m in tra_bou_bio_mets} return detect_false_positive_direct_metabolites( tra_bou_bio_mets, biomass_rxns, main_comp, ext_space, tra_bou_bio_fluxes, met_flux_sum)
[ "def", "find_direct_metabolites", "(", "model", ",", "reaction", ",", "tolerance", "=", "1E-06", ")", ":", "biomass_rxns", "=", "set", "(", "helpers", ".", "find_biomass_reaction", "(", "model", ")", ")", "tra_bou_bio_rxns", "=", "helpers", ".", "find_interchange_biomass_reactions", "(", "model", ",", "biomass_rxns", ")", "try", ":", "precursors", "=", "find_biomass_precursors", "(", "model", ",", "reaction", ")", "main_comp", "=", "helpers", ".", "find_compartment_id_in_model", "(", "model", ",", "'c'", ")", "ext_space", "=", "helpers", ".", "find_compartment_id_in_model", "(", "model", ",", "'e'", ")", "except", "KeyError", ":", "LOGGER", ".", "error", "(", "\"Failed to properly identify cytosolic and extracellular \"", "\"compartments.\"", ")", "raise_with_traceback", "(", "KeyError", "(", "\"The cytosolic and/or extracellular \"", "\"compartments could not be identified.\"", ")", ")", "except", "RuntimeError", ":", "LOGGER", ".", "error", "(", "\"Failed to properly identify cytosolic and extracellular \"", "\"compartments.\"", ")", "raise_with_traceback", "(", "RuntimeError", "(", "\"The cytosolic and/or extracellular \"", "\"compartments could not be \"", "\"identified.\"", ")", ")", "else", ":", "tra_bou_bio_mets", "=", "[", "met", "for", "met", "in", "precursors", "if", "met", ".", "reactions", ".", "issubset", "(", "tra_bou_bio_rxns", ")", "]", "rxns_of_interest", "=", "set", "(", "[", "rxn", "for", "met", "in", "tra_bou_bio_mets", "for", "rxn", "in", "met", ".", "reactions", "if", "rxn", "not", "in", "biomass_rxns", "]", ")", "solution", "=", "model", ".", "optimize", "(", "raise_error", "=", "True", ")", "if", "np", ".", "isclose", "(", "solution", ".", "objective_value", ",", "0", ",", "atol", "=", "tolerance", ")", ":", "LOGGER", ".", "error", "(", "\"Failed to generate a non-zero objective value with \"", "\"flux balance analysis.\"", ")", "raise", "OptimizationError", "(", "\"The flux balance analysis on this model returned an \"", "\"objective value of zero. Make sure the model can \"", "\"grow! Check if the constraints are not too strict!\"", ")", "tra_bou_bio_fluxes", "=", "{", "r", ":", "solution", "[", "r", ".", "id", "]", "for", "r", "in", "rxns_of_interest", "}", "met_flux_sum", "=", "{", "m", ":", "0", "for", "m", "in", "tra_bou_bio_mets", "}", "return", "detect_false_positive_direct_metabolites", "(", "tra_bou_bio_mets", ",", "biomass_rxns", ",", "main_comp", ",", "ext_space", ",", "tra_bou_bio_fluxes", ",", "met_flux_sum", ")" ]
Return list of possible direct biomass precursor metabolites. The term direct metabolites describes metabolites that are involved only in either transport and/or boundary reactions, AND the biomass reaction(s), but not in any purely metabolic reactions. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.Reaction The biomass reaction of the model under investigation. tolerance : float, optional Tolerance below which values will be regarded as zero. Returns ------- list Metabolites that qualify as direct metabolites i.e. biomass precursors that are taken up to be consumed by the biomass reaction only.
[ "Return", "list", "of", "possible", "direct", "biomass", "precursor", "metabolites", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/biomass.py#L209-L272
train
Returns a list of possible direct biomass precursor metabolites for a given reaction.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b1110 + 0o43) + '\064' + chr(2590 - 2538), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b10100 + 0o36) + '\x37' + chr(0b110100), 0o10), nzTpIcepk0o8(chr(120 - 72) + '\157' + '\062' + chr(49) + chr(0b110110), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(2049 - 1999) + chr(226 - 173) + chr(52), 0b1000), nzTpIcepk0o8('\060' + chr(5690 - 5579) + '\x34' + '\x30', 0o10), nzTpIcepk0o8('\060' + chr(0b110011 + 0o74) + chr(1869 - 1818) + chr(0b1100 + 0o52) + '\067', 0b1000), nzTpIcepk0o8(chr(1926 - 1878) + '\x6f' + chr(1067 - 1018) + '\062' + '\065', 0b1000), nzTpIcepk0o8(chr(0b101010 + 0o6) + chr(0b1101111) + '\062' + '\064' + chr(2074 - 2022), 0b1000), nzTpIcepk0o8(chr(781 - 733) + chr(111) + chr(53) + chr(0b100011 + 0o23), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(970 - 859) + chr(49) + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(1346 - 1298) + '\x6f' + chr(0b110010) + chr(48) + '\062', 0o10), nzTpIcepk0o8('\x30' + chr(0b10001 + 0o136) + chr(0b110001) + chr(0b110101) + '\061', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x33' + '\x34' + chr(939 - 889), 37725 - 37717), nzTpIcepk0o8(chr(48) + '\x6f' + chr(2093 - 2042) + chr(0b110100) + '\x34', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1100011 + 0o14) + chr(0b101111 + 0o2) + chr(53) + chr(2431 - 2379), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(51) + chr(0b100000 + 0o21) + '\067', 0b1000), nzTpIcepk0o8(chr(657 - 609) + chr(8682 - 8571) + chr(52), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x32' + chr(0b11111 + 0o25) + chr(0b111 + 0o60), ord("\x08")), nzTpIcepk0o8(chr(2151 - 2103) + chr(8881 - 8770) + chr(197 - 147) + '\x32' + '\064', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1010101 + 0o32) + chr(50) + '\064' + '\x32', 60611 - 60603), nzTpIcepk0o8(chr(74 - 26) + chr(8365 - 8254) + '\x33' + chr(2030 - 1975) + chr(0b110111), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + '\062' + chr(0b110101) + '\x30', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1010110 + 0o31) + chr(0b110011) + chr(357 - 307), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(0b110001) + chr(50) + chr(0b110001), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b101110 + 0o101) + '\062' + chr(1551 - 1498) + chr(52), 8), nzTpIcepk0o8(chr(1767 - 1719) + chr(0b110010 + 0o75) + chr(270 - 219) + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110011) + chr(0b10101 + 0o34) + chr(2515 - 2463), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(7697 - 7586) + chr(0b110010) + '\067' + chr(0b110001), 58589 - 58581), nzTpIcepk0o8(chr(0b11110 + 0o22) + chr(111) + '\x31' + '\x32' + chr(0b1000 + 0o57), 0b1000), nzTpIcepk0o8(chr(1833 - 1785) + chr(111) + chr(0b110010) + chr(48), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b0 + 0o62) + '\x32' + chr(2470 - 2420), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + '\062' + chr(0b1001 + 0o56) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(1242 - 1194) + '\157' + '\062' + chr(51) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(2076 - 2026) + '\x35', 0b1000), nzTpIcepk0o8(chr(275 - 227) + chr(1585 - 1474) + chr(595 - 545) + '\060' + chr(0b11000 + 0o32), 8), nzTpIcepk0o8(chr(0b11 + 0o55) + chr(111) + chr(51) + chr(55) + chr(0b10110 + 0o33), 55427 - 55419), nzTpIcepk0o8('\x30' + chr(11680 - 11569) + chr(0b110101) + chr(1553 - 1498), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(793 - 743) + '\062' + chr(0b110011), 0o10), nzTpIcepk0o8(chr(0b100100 + 0o14) + chr(0b1101111) + '\061' + '\063' + '\060', 0o10), nzTpIcepk0o8('\x30' + '\x6f' + chr(49) + chr(2369 - 2320) + chr(0b110101), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + chr(111) + '\x35' + chr(48), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'J'), '\x64' + chr(4125 - 4024) + chr(3728 - 3629) + chr(111) + chr(100) + chr(101))('\165' + chr(116) + '\x66' + chr(45) + chr(2367 - 2311)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def fS92prFRe3Uq(KW0sEfjlgNpM, gmOzD_aWO9K9, SbbO3Jm1TA7p=1e-06): AAV4xDQiM8Fn = Bvi71nNyvlqO(ofBs4ZktVP6z.find_biomass_reaction(KW0sEfjlgNpM)) Q8CZhPJEG2Cy = ofBs4ZktVP6z.find_interchange_biomass_reactions(KW0sEfjlgNpM, AAV4xDQiM8Fn) try: XQTFDRUVZ6I9 = HGSdoyWcZHRi(KW0sEfjlgNpM, gmOzD_aWO9K9) O7L4hqjWbviB = ofBs4ZktVP6z.find_compartment_id_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x07'), '\144' + chr(101) + '\143' + chr(0b1101111) + chr(0b110000 + 0o64) + chr(101))(chr(0b1101000 + 0o15) + '\164' + chr(1089 - 987) + chr(1748 - 1703) + chr(56))) bvt71X5v00sT = ofBs4ZktVP6z.find_compartment_id_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x01'), chr(3000 - 2900) + chr(101) + chr(0b1100011) + chr(0b1101111) + chr(0b1100100) + chr(0b1001001 + 0o34))(chr(117) + chr(0b1110100) + chr(0b11 + 0o143) + '\055' + chr(838 - 782))) except knUxyjfq07F9: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x15\xd5\xbf\xdbI\x87\x05\xf2XI\xc9\r'), '\144' + chr(0b1100101) + '\x63' + '\x6f' + chr(0b1100100) + chr(1012 - 911))('\165' + chr(0b11000 + 0o134) + '\x66' + '\x2d' + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'"\xdd\xe7\xc0E\x93u\xd0A,\xf2\x1b\x8d\x94\t\xbdh\xde\xb4\xcb\x9b\xcdt%\xc5y\xb5\x994i\xe6\xd0\xecz\xee\x90L\xb39#\x00\x9c\xeb\xd4T\x854\xc7K`\xee\x1c\x8e\x85\x1e\xefg\xc8\xf9\xd2\x9e\xdan<\xc9q\xb8\xcay'), chr(0b1100100) + chr(7295 - 7194) + chr(0b1100011) + chr(7330 - 7219) + '\x64' + chr(101))(chr(0b1110101) + chr(0b1100011 + 0o21) + chr(0b1100110) + chr(45) + '\x38')) OIDii7_nVdKe(knUxyjfq07F9(roI3spqORKae(ES5oEprVxulp(b'0\xd4\xeb\x8cC\x8e!\xcb]c\xee\x00\x81\xc4\r\xa1`\x88\xfb\xd0\xdf\xcdb%\xde~\xaf\xdc;|\xe7\xd3\xfeg\xa2\x9a@\xfe(,\x16\xc8\xe3\xc9N\x83&\x84Mc\xf7\x05\x86\xc4\x02\xa0p\x87\xf6\xc7\xdf\xc1~4\xc2k\xa5\xdf>u\xf6\x91'), chr(0b1100100) + chr(0b1010110 + 0o17) + chr(0b1011010 + 0o11) + chr(0b111011 + 0o64) + '\x64' + '\145')(chr(0b110010 + 0o103) + '\164' + '\x66' + '\055' + chr(0b110101 + 0o3)))) except _1qUu0gKi9gH: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x15\xd5\xbf\xdbI\x87\x05\xf2XI\xc9\r'), chr(7915 - 7815) + chr(0b1100101) + chr(0b1100011) + chr(0b1000101 + 0o52) + '\144' + chr(0b1100101))(chr(117) + chr(0b0 + 0o164) + '\x66' + chr(0b100 + 0o51) + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'"\xdd\xe7\xc0E\x93u\xd0A,\xf2\x1b\x8d\x94\t\xbdh\xde\xb4\xcb\x9b\xcdt%\xc5y\xb5\x994i\xe6\xd0\xecz\xee\x90L\xb39#\x00\x9c\xeb\xd4T\x854\xc7K`\xee\x1c\x8e\x85\x1e\xefg\xc8\xf9\xd2\x9e\xdan<\xc9q\xb8\xcay'), chr(0b1100100) + chr(101) + chr(99) + chr(111) + chr(100) + chr(0b1100101))(chr(117) + chr(116) + chr(0b1100110) + chr(994 - 949) + '\070')) OIDii7_nVdKe(_1qUu0gKi9gH(roI3spqORKae(ES5oEprVxulp(b'0\xd4\xeb\x8cC\x8e!\xcb]c\xee\x00\x81\xc4\r\xa1`\x88\xfb\xd0\xdf\xcdb%\xde~\xaf\xdc;|\xe7\xd3\xfeg\xa2\x9a@\xfe(,\x16\xc8\xe3\xc9N\x83&\x84Mc\xf7\x05\x86\xc4\x02\xa0p\x87\xf6\xc7\xdf\xc1~4\xc2k\xa5\xdf>u\xf6\x91'), '\x64' + '\x65' + chr(0b1100011) + chr(0b1100010 + 0o15) + '\x64' + chr(101))(chr(8603 - 8486) + chr(0b111100 + 0o70) + chr(102) + '\055' + '\x38'))) else: fP8M2aLALpRK = [dYApxmRvGyhb for dYApxmRvGyhb in XQTFDRUVZ6I9 if dYApxmRvGyhb.reactions.issubset(Q8CZhPJEG2Cy)] kF4AQHzAjgyc = Bvi71nNyvlqO([cXXyzqlAJbZW for dYApxmRvGyhb in fP8M2aLALpRK for cXXyzqlAJbZW in dYApxmRvGyhb.reactions if cXXyzqlAJbZW not in AAV4xDQiM8Fn]) p4wk1LthDW8I = KW0sEfjlgNpM.optimize(raise_error=nzTpIcepk0o8(chr(965 - 917) + chr(0b1011110 + 0o21) + chr(0b110001), 0b1000)) if roI3spqORKae(nDF4gVNx0u9Q, roI3spqORKae(ES5oEprVxulp(b'7\xee\xd9\xef\x7f\xb83\xf1\x1fa\xce!'), chr(0b100000 + 0o104) + chr(0b1100101) + '\x63' + chr(9481 - 9370) + '\144' + '\x65')(chr(117) + chr(0b1110100) + chr(0b1100110) + '\055' + chr(0b111000)))(roI3spqORKae(p4wk1LthDW8I, roI3spqORKae(ES5oEprVxulp(b'\x0b\xde\xe4\xc9C\x83<\xd2KS\xf4\x08\x8e\x91\t'), chr(0b10001 + 0o123) + chr(0b1011100 + 0o11) + chr(0b1100011) + '\x6f' + '\x64' + chr(0b1100101))(chr(117) + chr(0b1100110 + 0o16) + chr(3422 - 3320) + chr(1614 - 1569) + '\070')), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x30', 0o10), atol=SbbO3Jm1TA7p): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\x15\xd5\xbf\xdbI\x87\x05\xf2XI\xc9\r'), chr(0b1100100) + chr(1399 - 1298) + chr(0b110111 + 0o54) + '\157' + '\144' + chr(0b111 + 0o136))('\x75' + chr(0b1110100) + chr(0b1100110) + chr(0b11000 + 0o25) + chr(0b10 + 0o66)))(roI3spqORKae(ES5oEprVxulp(b'"\xdd\xe7\xc0E\x93u\xd0A,\xe5\x0c\x8c\x81\x1e\xaep\xc2\xb4\xc3\xdf\xc6u?\x81e\xa9\xcb80\xfd\xdd\xf5p\xe1\x8dF\xe5=m\x12\xdd\xe2\xd9E\xd7"\xcdZd\xa2\x0f\x8e\x91\x14\xeff\xc6\xf8\xc3\x91\xcb\x7fq\xcdq\xad\xd5.c\xfb\xcc\xb1'), chr(100) + chr(0b1100101) + chr(0b1100011) + chr(111) + chr(0b1100100) + '\x65')('\x75' + chr(116) + '\x66' + chr(0b100 + 0o51) + chr(1421 - 1365))) raise oxzckimigEhS(roI3spqORKae(ES5oEprVxulp(b'0\xd4\xeb\x8cF\x9b \xdc\x0en\xe3\x05\x83\x8a\x0f\xaa$\xc6\xfa\xc3\x93\xd1i8\xdf?\xa3\xd7wd\xfa\xd6\xec5\xef\x96K\xf64m\x16\xd9\xfa\xd9R\x990\xc0\x0em\xecI\x8d\x86\x06\xaag\xd3\xfd\xd4\x9a\x88l0\xc0j\xa9\x998v\xb2\xc5\xfag\xed\xd7\x0f\xde9&\x01\x9c\xfd\xd9R\x92u\xd0Fi\xa2\x04\x8d\x80\t\xa3$\xc4\xf5\xcc\xdf\xcfh>\xdb>\xec\xfa?u\xf1\xd4\xbf|\xe4\xd9[\xfb=m\x07\xd3\xe0\xdfT\x854\xcd@x\xf1I\x83\x96\t\xefj\xc8\xe0\x82\x8b\xc7uq\xdfk\xbe\xd04d\xb3'), chr(100) + chr(0b1100101) + chr(99) + chr(0b1101000 + 0o7) + chr(0b1100100) + chr(0b1100101))(chr(117) + chr(116) + chr(0b1100110) + '\055' + chr(56))) hK88R8cF0K7c = {LCrwg7lcbmU9: p4wk1LthDW8I[LCrwg7lcbmU9.maLnLg8O5zPT] for LCrwg7lcbmU9 in kF4AQHzAjgyc} UIl1Y7kIGrHE = {tF75nqoNENFL: nzTpIcepk0o8('\060' + '\x6f' + chr(0b110000), 8) for tF75nqoNENFL in fP8M2aLALpRK} return Pr3Hvu1XRT05(fP8M2aLALpRK, AAV4xDQiM8Fn, O7L4hqjWbviB, bvt71X5v00sT, hK88R8cF0K7c, UIl1Y7kIGrHE)
opencobra/memote
memote/support/biomass.py
detect_false_positive_direct_metabolites
def detect_false_positive_direct_metabolites( candidates, biomass_reactions, cytosol, extra, reaction_fluxes, metabolite_fluxes): """ Weed out false positive direct metabolites. False positives exists in the extracellular compartment with flux from the cytosolic compartment and are part of the biomass reaction(s). It sums fluxes positively or negatively depending on if direct metabolites in the extracellular compartment are defined as reactants or products in various reactions. Parameters ---------- candidates : list of cobra.Metabolite Candidate direct metabolites. biomass_reactions : set of cobra.Reaction The biomass reactions. Usually one or two. cytosol : str The identifier of the cytosolic compartment. extra : str The identifier of the extracellular compartment. Returns ------- list Definitive list of direct metabolites, i.e., biomass precursors that are taken up to be consumed by the biomass reaction only. """ for met in candidates: is_internal = met.compartment != extra for rxn in met.reactions: if rxn in biomass_reactions: continue # Internal metabolites can not be false positives. if is_internal: metabolite_fluxes[met] += abs(reaction_fluxes[rxn]) continue # if the metabolite is in the "e" compartment and a reactant, # sum the fluxes accordingly (outward=negative, inward=positive) if met in rxn.reactants: product_comps = set([p.compartment for p in rxn.products]) # if the reaction has no product (outward flux) if len(product_comps) == 0: metabolite_fluxes[met] += -reaction_fluxes[rxn] # if the reaction has a product in "c" (inward flux) elif cytosol in product_comps: metabolite_fluxes[met] += reaction_fluxes[rxn] # if the metabolite is in the "e" compartment and a product, # sum the fluxes accordingly (outward=negative, inward=positive) elif met in rxn.products: reactant_comps = set([p.compartment for p in rxn.reactants]) # if the reaction has no reactant (inward flux) if len(reactant_comps) == 0: metabolite_fluxes[met] += reaction_fluxes[rxn] # if the reaction has a reactant in "c" (outward flux) elif cytosol in reactant_comps: metabolite_fluxes[met] += -reaction_fluxes[rxn] return [m for m, f in iteritems(metabolite_fluxes) if f > 0]
python
def detect_false_positive_direct_metabolites( candidates, biomass_reactions, cytosol, extra, reaction_fluxes, metabolite_fluxes): """ Weed out false positive direct metabolites. False positives exists in the extracellular compartment with flux from the cytosolic compartment and are part of the biomass reaction(s). It sums fluxes positively or negatively depending on if direct metabolites in the extracellular compartment are defined as reactants or products in various reactions. Parameters ---------- candidates : list of cobra.Metabolite Candidate direct metabolites. biomass_reactions : set of cobra.Reaction The biomass reactions. Usually one or two. cytosol : str The identifier of the cytosolic compartment. extra : str The identifier of the extracellular compartment. Returns ------- list Definitive list of direct metabolites, i.e., biomass precursors that are taken up to be consumed by the biomass reaction only. """ for met in candidates: is_internal = met.compartment != extra for rxn in met.reactions: if rxn in biomass_reactions: continue # Internal metabolites can not be false positives. if is_internal: metabolite_fluxes[met] += abs(reaction_fluxes[rxn]) continue # if the metabolite is in the "e" compartment and a reactant, # sum the fluxes accordingly (outward=negative, inward=positive) if met in rxn.reactants: product_comps = set([p.compartment for p in rxn.products]) # if the reaction has no product (outward flux) if len(product_comps) == 0: metabolite_fluxes[met] += -reaction_fluxes[rxn] # if the reaction has a product in "c" (inward flux) elif cytosol in product_comps: metabolite_fluxes[met] += reaction_fluxes[rxn] # if the metabolite is in the "e" compartment and a product, # sum the fluxes accordingly (outward=negative, inward=positive) elif met in rxn.products: reactant_comps = set([p.compartment for p in rxn.reactants]) # if the reaction has no reactant (inward flux) if len(reactant_comps) == 0: metabolite_fluxes[met] += reaction_fluxes[rxn] # if the reaction has a reactant in "c" (outward flux) elif cytosol in reactant_comps: metabolite_fluxes[met] += -reaction_fluxes[rxn] return [m for m, f in iteritems(metabolite_fluxes) if f > 0]
[ "def", "detect_false_positive_direct_metabolites", "(", "candidates", ",", "biomass_reactions", ",", "cytosol", ",", "extra", ",", "reaction_fluxes", ",", "metabolite_fluxes", ")", ":", "for", "met", "in", "candidates", ":", "is_internal", "=", "met", ".", "compartment", "!=", "extra", "for", "rxn", "in", "met", ".", "reactions", ":", "if", "rxn", "in", "biomass_reactions", ":", "continue", "# Internal metabolites can not be false positives.", "if", "is_internal", ":", "metabolite_fluxes", "[", "met", "]", "+=", "abs", "(", "reaction_fluxes", "[", "rxn", "]", ")", "continue", "# if the metabolite is in the \"e\" compartment and a reactant,", "# sum the fluxes accordingly (outward=negative, inward=positive)", "if", "met", "in", "rxn", ".", "reactants", ":", "product_comps", "=", "set", "(", "[", "p", ".", "compartment", "for", "p", "in", "rxn", ".", "products", "]", ")", "# if the reaction has no product (outward flux)", "if", "len", "(", "product_comps", ")", "==", "0", ":", "metabolite_fluxes", "[", "met", "]", "+=", "-", "reaction_fluxes", "[", "rxn", "]", "# if the reaction has a product in \"c\" (inward flux)", "elif", "cytosol", "in", "product_comps", ":", "metabolite_fluxes", "[", "met", "]", "+=", "reaction_fluxes", "[", "rxn", "]", "# if the metabolite is in the \"e\" compartment and a product,", "# sum the fluxes accordingly (outward=negative, inward=positive)", "elif", "met", "in", "rxn", ".", "products", ":", "reactant_comps", "=", "set", "(", "[", "p", ".", "compartment", "for", "p", "in", "rxn", ".", "reactants", "]", ")", "# if the reaction has no reactant (inward flux)", "if", "len", "(", "reactant_comps", ")", "==", "0", ":", "metabolite_fluxes", "[", "met", "]", "+=", "reaction_fluxes", "[", "rxn", "]", "# if the reaction has a reactant in \"c\" (outward flux)", "elif", "cytosol", "in", "reactant_comps", ":", "metabolite_fluxes", "[", "met", "]", "+=", "-", "reaction_fluxes", "[", "rxn", "]", "return", "[", "m", "for", "m", ",", "f", "in", "iteritems", "(", "metabolite_fluxes", ")", "if", "f", ">", "0", "]" ]
Weed out false positive direct metabolites. False positives exists in the extracellular compartment with flux from the cytosolic compartment and are part of the biomass reaction(s). It sums fluxes positively or negatively depending on if direct metabolites in the extracellular compartment are defined as reactants or products in various reactions. Parameters ---------- candidates : list of cobra.Metabolite Candidate direct metabolites. biomass_reactions : set of cobra.Reaction The biomass reactions. Usually one or two. cytosol : str The identifier of the cytosolic compartment. extra : str The identifier of the extracellular compartment. Returns ------- list Definitive list of direct metabolites, i.e., biomass precursors that are taken up to be consumed by the biomass reaction only.
[ "Weed", "out", "false", "positive", "direct", "metabolites", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/biomass.py#L275-L334
train
Detects false positive direct metabolites in the given set of candidates.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110101) + chr(52), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(0b110001) + chr(0b100000 + 0o23) + chr(1043 - 992), 0b1000), nzTpIcepk0o8(chr(1102 - 1054) + chr(111) + chr(0b101010 + 0o7) + chr(333 - 281) + chr(0b110010), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(8052 - 7941) + chr(1227 - 1177) + '\065' + chr(0b110010 + 0o4), 0b1000), nzTpIcepk0o8(chr(48) + chr(1651 - 1540) + chr(0b1111 + 0o44) + '\064' + chr(53), ord("\x08")), nzTpIcepk0o8(chr(0b10011 + 0o35) + chr(0b1101111) + '\x33' + chr(1750 - 1695), 44908 - 44900), nzTpIcepk0o8('\060' + chr(0b111101 + 0o62) + '\x31' + '\067' + chr(0b110001 + 0o4), 0o10), nzTpIcepk0o8('\060' + chr(0b111 + 0o150) + chr(0b11 + 0o57) + chr(0b110100) + '\062', ord("\x08")), nzTpIcepk0o8(chr(1023 - 975) + '\x6f' + chr(0b110011) + chr(0b110011) + '\x36', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b10000 + 0o42) + '\067' + '\063', ord("\x08")), nzTpIcepk0o8(chr(0b101000 + 0o10) + '\x6f' + chr(0b100101 + 0o15) + chr(55) + chr(0b110100), 0o10), nzTpIcepk0o8('\060' + chr(0b1010111 + 0o30) + chr(51) + chr(0b110011 + 0o2) + '\062', 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110010) + '\060' + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\061' + '\066' + '\x33', 1213 - 1205), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(51) + chr(1252 - 1197) + '\062', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(51) + chr(0b10 + 0o64) + chr(0b110100), 31935 - 31927), nzTpIcepk0o8(chr(48) + '\x6f' + chr(51) + '\061' + chr(54), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1001111 + 0o40) + '\061' + chr(0b1010 + 0o55), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(1987 - 1937) + chr(2596 - 2542) + chr(0b10111 + 0o35), 0o10), nzTpIcepk0o8(chr(2182 - 2134) + '\157' + chr(0b100001 + 0o25) + chr(0b1001 + 0o54), 0o10), nzTpIcepk0o8('\x30' + chr(123 - 12) + chr(51) + chr(49) + chr(49), 0b1000), nzTpIcepk0o8(chr(48) + chr(8463 - 8352) + chr(54) + '\x37', 10688 - 10680), nzTpIcepk0o8(chr(425 - 377) + chr(0b1010110 + 0o31) + chr(50) + '\x35' + chr(0b101000 + 0o16), 8), nzTpIcepk0o8(chr(0b101010 + 0o6) + chr(0b100001 + 0o116) + chr(1261 - 1212) + chr(0b11111 + 0o30), 8), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110001) + chr(50) + chr(0b11 + 0o61), 0o10), nzTpIcepk0o8(chr(0b1 + 0o57) + '\157' + '\063' + chr(1519 - 1465) + '\063', 0b1000), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(0b1101111) + '\x33' + chr(2293 - 2245) + '\066', 0o10), nzTpIcepk0o8(chr(706 - 658) + chr(0b1101111) + chr(0b110111) + '\060', 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b1 + 0o66) + '\x32', 0o10), nzTpIcepk0o8(chr(989 - 941) + '\x6f' + '\063' + chr(0b110110) + chr(55), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(5821 - 5710) + chr(0b110011) + '\064', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(52) + chr(0b101001 + 0o13), ord("\x08")), nzTpIcepk0o8(chr(1183 - 1135) + chr(111) + chr(50) + chr(0b100110 + 0o15) + chr(397 - 342), 17554 - 17546), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110010) + '\x30' + '\x36', 30553 - 30545), nzTpIcepk0o8(chr(57 - 9) + chr(0b1101111) + chr(0b100110 + 0o13) + chr(54) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(5678 - 5567) + '\063' + '\063' + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\063' + chr(0b10011 + 0o37) + chr(0b11001 + 0o34), 0o10), nzTpIcepk0o8(chr(125 - 77) + '\x6f' + chr(0b10101 + 0o36) + chr(0b110101) + chr(51), 56560 - 56552), nzTpIcepk0o8(chr(0b11101 + 0o23) + chr(111) + '\062' + chr(0b110010) + '\x37', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110011) + '\x30' + chr(2218 - 2164), 8)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(856 - 808) + chr(5478 - 5367) + '\x35' + chr(48), 48544 - 48536)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x02'), chr(100) + chr(8564 - 8463) + '\x63' + '\157' + '\144' + chr(101))(chr(117) + chr(0b1110100) + chr(222 - 120) + chr(0b101101) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Pr3Hvu1XRT05(FzWHNpnfM7HR, zUxIWf9so9XD, UIGCpNLbPc5r, H4aiVlfb0_oS, aMAiYYXxE5xJ, bCjjWu3cQFbK): for dYApxmRvGyhb in FzWHNpnfM7HR: rNPWTH_GU9LO = dYApxmRvGyhb.WV7udppUv0vM != H4aiVlfb0_oS for cXXyzqlAJbZW in roI3spqORKae(dYApxmRvGyhb, roI3spqORKae(ES5oEprVxulp(b'^>\x03\xcd\x91v\x12\xcc\xad'), '\x64' + chr(0b1100101) + chr(0b111101 + 0o46) + '\157' + '\144' + chr(101))(chr(5279 - 5162) + chr(0b1110100) + '\x66' + chr(0b101101) + chr(1500 - 1444))): if cXXyzqlAJbZW in zUxIWf9so9XD: continue if rNPWTH_GU9LO: bCjjWu3cQFbK[dYApxmRvGyhb] += zQBGwUT7UU8L(aMAiYYXxE5xJ[cXXyzqlAJbZW]) continue if dYApxmRvGyhb in roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'^>\x03\xcd\x91~\x13\xd6\xad'), chr(3326 - 3226) + chr(9406 - 9305) + chr(99) + '\157' + '\x64' + chr(0b101100 + 0o71))('\x75' + chr(116) + '\x66' + '\x2d' + chr(3115 - 3059))): Vx8OD4cBCVAV = Bvi71nNyvlqO([fSdw5wwLo9MO.WV7udppUv0vM for fSdw5wwLo9MO in cXXyzqlAJbZW.mRqOpoPWPHxj]) if ftfygxgFas5X(Vx8OD4cBCVAV) == nzTpIcepk0o8('\060' + chr(0b1101111) + '\x30', 0o10): bCjjWu3cQFbK[dYApxmRvGyhb] += -aMAiYYXxE5xJ[cXXyzqlAJbZW] elif UIGCpNLbPc5r in Vx8OD4cBCVAV: bCjjWu3cQFbK[dYApxmRvGyhb] += aMAiYYXxE5xJ[cXXyzqlAJbZW] elif dYApxmRvGyhb in roI3spqORKae(cXXyzqlAJbZW, roI3spqORKae(ES5oEprVxulp(b'A\t\x13\xe1\x95p-\xf5\x8e\xf3\xc4\x80'), '\144' + chr(0b1100101) + chr(99) + chr(0b1101111) + chr(100) + chr(101))('\165' + '\x74' + '\x66' + chr(0b101101) + chr(784 - 728))): XVMDuUjZgTzv = Bvi71nNyvlqO([fSdw5wwLo9MO.WV7udppUv0vM for fSdw5wwLo9MO in cXXyzqlAJbZW.reactants]) if ftfygxgFas5X(XVMDuUjZgTzv) == nzTpIcepk0o8(chr(48) + '\157' + chr(0b110000), 8): bCjjWu3cQFbK[dYApxmRvGyhb] += aMAiYYXxE5xJ[cXXyzqlAJbZW] elif UIGCpNLbPc5r in XVMDuUjZgTzv: bCjjWu3cQFbK[dYApxmRvGyhb] += -aMAiYYXxE5xJ[cXXyzqlAJbZW] return [tF75nqoNENFL for (tF75nqoNENFL, _R8IKF5IwAfX) in tcSkjcrLksk1(bCjjWu3cQFbK) if _R8IKF5IwAfX > nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b100000 + 0o20), 8)]
opencobra/memote
memote/support/biomass.py
bundle_biomass_components
def bundle_biomass_components(model, reaction): """ Return bundle biomass component reactions if it is not one lumped reaction. There are two basic ways of specifying the biomass composition. The most common is a single lumped reaction containing all biomass precursors. Alternatively, the biomass equation can be split into several reactions each focusing on a different macromolecular component for instance a (1 gDW ash) + b (1 gDW phospholipids) + c (free fatty acids)+ d (1 gDW carbs) + e (1 gDW protein) + f (1 gDW RNA) + g (1 gDW DNA) + h (vitamins/cofactors) + xATP + xH2O-> 1 gDCW biomass + xADP + xH + xPi. This function aims to identify if the given biomass reaction 'reaction', is a lumped all-in-one reaction, or whether it is just the final composing reaction of all macromolecular components. It is important to identify which other reaction belong to a given biomass reaction to be able to identify universal biomass components or calculate detailed precursor stoichiometries. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- list One or more reactions that qualify as THE biomass equation together. Notes ----- Counting H2O, ADP, Pi, H, and ATP, the amount of metabolites in a split reaction is comparatively low: Any reaction with less or equal to 15 metabolites can probably be counted as a split reaction containing Ash, Phospholipids, Fatty Acids, Carbohydrates (i.e. cell wall components), Protein, RNA, DNA, Cofactors and Vitamins, and Small Molecules. Any reaction with more than or equal to 28 metabolites, however, (21 AA + 3 Nucleotides (4-ATP) + 4 Deoxy-Nucleotides) can be considered a lumped reaction. Anything in between will be treated conservatively as a lumped reaction. For split reactions, after removing any of the metabolites associated with growth-associated energy expenditure (H2O, ADP, Pi, H, and ATP), the only remaining metabolites should be generalized macromolecule precursors e.g. Protein, Phospholipids etc. Each of these have their own composing reactions. Hence we include the reactions of these metabolites in the set that ultimately makes up the returned list of reactions that together make up the biomass equation. """ if len(reaction.metabolites) >= 16: return [reaction] id_of_main_compartment = helpers.find_compartment_id_in_model(model, 'c') gam_mets = ["MNXM3", "MNXM2", "MNXM7", "MNXM1", 'MNXM9'] try: gam = set([helpers.find_met_in_model( model, met, id_of_main_compartment)[0] for met in gam_mets]) except RuntimeError: gam = set() regex = re.compile('^{}(_[a-zA-Z]+?)*?$'.format('biomass'), re.IGNORECASE) biomass_metabolite = set(model.metabolites.query(regex)) macromolecules = set(reaction.metabolites) - gam - biomass_metabolite bundled_reactions = set() for met in macromolecules: bundled_reactions = bundled_reactions | set(met.reactions) return list(bundled_reactions)
python
def bundle_biomass_components(model, reaction): """ Return bundle biomass component reactions if it is not one lumped reaction. There are two basic ways of specifying the biomass composition. The most common is a single lumped reaction containing all biomass precursors. Alternatively, the biomass equation can be split into several reactions each focusing on a different macromolecular component for instance a (1 gDW ash) + b (1 gDW phospholipids) + c (free fatty acids)+ d (1 gDW carbs) + e (1 gDW protein) + f (1 gDW RNA) + g (1 gDW DNA) + h (vitamins/cofactors) + xATP + xH2O-> 1 gDCW biomass + xADP + xH + xPi. This function aims to identify if the given biomass reaction 'reaction', is a lumped all-in-one reaction, or whether it is just the final composing reaction of all macromolecular components. It is important to identify which other reaction belong to a given biomass reaction to be able to identify universal biomass components or calculate detailed precursor stoichiometries. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- list One or more reactions that qualify as THE biomass equation together. Notes ----- Counting H2O, ADP, Pi, H, and ATP, the amount of metabolites in a split reaction is comparatively low: Any reaction with less or equal to 15 metabolites can probably be counted as a split reaction containing Ash, Phospholipids, Fatty Acids, Carbohydrates (i.e. cell wall components), Protein, RNA, DNA, Cofactors and Vitamins, and Small Molecules. Any reaction with more than or equal to 28 metabolites, however, (21 AA + 3 Nucleotides (4-ATP) + 4 Deoxy-Nucleotides) can be considered a lumped reaction. Anything in between will be treated conservatively as a lumped reaction. For split reactions, after removing any of the metabolites associated with growth-associated energy expenditure (H2O, ADP, Pi, H, and ATP), the only remaining metabolites should be generalized macromolecule precursors e.g. Protein, Phospholipids etc. Each of these have their own composing reactions. Hence we include the reactions of these metabolites in the set that ultimately makes up the returned list of reactions that together make up the biomass equation. """ if len(reaction.metabolites) >= 16: return [reaction] id_of_main_compartment = helpers.find_compartment_id_in_model(model, 'c') gam_mets = ["MNXM3", "MNXM2", "MNXM7", "MNXM1", 'MNXM9'] try: gam = set([helpers.find_met_in_model( model, met, id_of_main_compartment)[0] for met in gam_mets]) except RuntimeError: gam = set() regex = re.compile('^{}(_[a-zA-Z]+?)*?$'.format('biomass'), re.IGNORECASE) biomass_metabolite = set(model.metabolites.query(regex)) macromolecules = set(reaction.metabolites) - gam - biomass_metabolite bundled_reactions = set() for met in macromolecules: bundled_reactions = bundled_reactions | set(met.reactions) return list(bundled_reactions)
[ "def", "bundle_biomass_components", "(", "model", ",", "reaction", ")", ":", "if", "len", "(", "reaction", ".", "metabolites", ")", ">=", "16", ":", "return", "[", "reaction", "]", "id_of_main_compartment", "=", "helpers", ".", "find_compartment_id_in_model", "(", "model", ",", "'c'", ")", "gam_mets", "=", "[", "\"MNXM3\"", ",", "\"MNXM2\"", ",", "\"MNXM7\"", ",", "\"MNXM1\"", ",", "'MNXM9'", "]", "try", ":", "gam", "=", "set", "(", "[", "helpers", ".", "find_met_in_model", "(", "model", ",", "met", ",", "id_of_main_compartment", ")", "[", "0", "]", "for", "met", "in", "gam_mets", "]", ")", "except", "RuntimeError", ":", "gam", "=", "set", "(", ")", "regex", "=", "re", ".", "compile", "(", "'^{}(_[a-zA-Z]+?)*?$'", ".", "format", "(", "'biomass'", ")", ",", "re", ".", "IGNORECASE", ")", "biomass_metabolite", "=", "set", "(", "model", ".", "metabolites", ".", "query", "(", "regex", ")", ")", "macromolecules", "=", "set", "(", "reaction", ".", "metabolites", ")", "-", "gam", "-", "biomass_metabolite", "bundled_reactions", "=", "set", "(", ")", "for", "met", "in", "macromolecules", ":", "bundled_reactions", "=", "bundled_reactions", "|", "set", "(", "met", ".", "reactions", ")", "return", "list", "(", "bundled_reactions", ")" ]
Return bundle biomass component reactions if it is not one lumped reaction. There are two basic ways of specifying the biomass composition. The most common is a single lumped reaction containing all biomass precursors. Alternatively, the biomass equation can be split into several reactions each focusing on a different macromolecular component for instance a (1 gDW ash) + b (1 gDW phospholipids) + c (free fatty acids)+ d (1 gDW carbs) + e (1 gDW protein) + f (1 gDW RNA) + g (1 gDW DNA) + h (vitamins/cofactors) + xATP + xH2O-> 1 gDCW biomass + xADP + xH + xPi. This function aims to identify if the given biomass reaction 'reaction', is a lumped all-in-one reaction, or whether it is just the final composing reaction of all macromolecular components. It is important to identify which other reaction belong to a given biomass reaction to be able to identify universal biomass components or calculate detailed precursor stoichiometries. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- list One or more reactions that qualify as THE biomass equation together. Notes ----- Counting H2O, ADP, Pi, H, and ATP, the amount of metabolites in a split reaction is comparatively low: Any reaction with less or equal to 15 metabolites can probably be counted as a split reaction containing Ash, Phospholipids, Fatty Acids, Carbohydrates (i.e. cell wall components), Protein, RNA, DNA, Cofactors and Vitamins, and Small Molecules. Any reaction with more than or equal to 28 metabolites, however, (21 AA + 3 Nucleotides (4-ATP) + 4 Deoxy-Nucleotides) can be considered a lumped reaction. Anything in between will be treated conservatively as a lumped reaction. For split reactions, after removing any of the metabolites associated with growth-associated energy expenditure (H2O, ADP, Pi, H, and ATP), the only remaining metabolites should be generalized macromolecule precursors e.g. Protein, Phospholipids etc. Each of these have their own composing reactions. Hence we include the reactions of these metabolites in the set that ultimately makes up the returned list of reactions that together make up the biomass equation.
[ "Return", "bundle", "biomass", "component", "reactions", "if", "it", "is", "not", "one", "lumped", "reaction", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/biomass.py#L337-L408
train
Return a list of all bundle biomass components for a given reaction.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(1263 - 1215) + chr(0b1101111) + chr(0b101100 + 0o7) + chr(0b110111) + chr(50), 15473 - 15465), nzTpIcepk0o8('\060' + chr(10354 - 10243) + chr(773 - 724) + chr(2387 - 2334) + '\x35', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1010110 + 0o31) + chr(1024 - 973), ord("\x08")), nzTpIcepk0o8(chr(1409 - 1361) + '\157' + chr(0b11000 + 0o31) + '\x31' + chr(839 - 786), 8110 - 8102), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110010) + chr(632 - 577), 64343 - 64335), nzTpIcepk0o8(chr(0b1010 + 0o46) + '\157' + '\062' + chr(0b110100) + chr(50), 65443 - 65435), nzTpIcepk0o8('\x30' + chr(1267 - 1156) + '\x32' + '\065' + chr(985 - 936), 23400 - 23392), nzTpIcepk0o8('\x30' + chr(7662 - 7551) + chr(51) + '\x35' + chr(548 - 498), 0o10), nzTpIcepk0o8(chr(1273 - 1225) + '\157' + chr(0b1111 + 0o50) + '\061', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(55), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1110 + 0o141) + '\062' + chr(52) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\062' + chr(0b110001) + chr(1608 - 1556), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(7894 - 7783) + chr(0b11 + 0o62) + '\064', 0b1000), nzTpIcepk0o8(chr(0b101111 + 0o1) + '\157' + chr(0b110001) + '\066' + chr(236 - 184), 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\062' + chr(1349 - 1300) + '\067', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + '\062' + '\x37' + chr(51), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x32' + '\x30' + '\x30', 32179 - 32171), nzTpIcepk0o8(chr(48) + '\x6f' + '\062' + chr(49) + chr(0b101 + 0o61), 0o10), nzTpIcepk0o8(chr(292 - 244) + chr(1307 - 1196) + chr(1250 - 1199) + chr(53) + '\067', 0o10), nzTpIcepk0o8('\x30' + '\x6f' + chr(1661 - 1610) + chr(0b100100 + 0o21) + chr(0b10 + 0o60), 8), nzTpIcepk0o8('\x30' + '\157' + chr(51) + chr(49) + '\x31', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(3061 - 2950) + '\x31' + chr(53) + '\x31', 0o10), nzTpIcepk0o8(chr(1589 - 1541) + chr(111) + chr(0b110101) + '\060', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1010010 + 0o35) + chr(49) + chr(0b1111 + 0o50) + chr(2045 - 1997), 0o10), nzTpIcepk0o8(chr(1842 - 1794) + chr(0b1101111) + '\x32' + chr(0b110000) + '\062', 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\062' + chr(0b110000) + chr(51), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\061' + chr(1944 - 1891) + chr(0b11011 + 0o30), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\061' + chr(0b101000 + 0o16) + chr(0b110100 + 0o2), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(572 - 521) + chr(0b100111 + 0o13) + chr(0b11010 + 0o33), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(51) + chr(53) + '\061', 63243 - 63235), nzTpIcepk0o8('\x30' + chr(0b111101 + 0o62) + chr(1970 - 1921) + chr(509 - 454) + '\062', 54036 - 54028), nzTpIcepk0o8(chr(1094 - 1046) + '\x6f' + chr(49) + chr(0b110001) + '\066', 5614 - 5606), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110010) + chr(50) + chr(50), 0o10), nzTpIcepk0o8(chr(48) + chr(3339 - 3228) + chr(151 - 97) + chr(2679 - 2626), 0o10), nzTpIcepk0o8('\060' + chr(111) + '\x33' + chr(0b110011) + chr(51), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1001000 + 0o47) + chr(51) + '\x32' + chr(0b10110 + 0o37), 8), nzTpIcepk0o8(chr(48) + chr(0b101000 + 0o107) + chr(1270 - 1219) + '\x34' + '\067', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1001011 + 0o44) + chr(0b11101 + 0o27), ord("\x08")), nzTpIcepk0o8(chr(1831 - 1783) + chr(111) + chr(0b101110 + 0o4) + '\064' + chr(2991 - 2936), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b111000 + 0o67) + '\x31' + chr(0b110 + 0o57) + '\x30', 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1284 - 1236) + chr(6778 - 6667) + chr(1309 - 1256) + chr(48), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xd4'), chr(0b11 + 0o141) + chr(0b11010 + 0o113) + '\x63' + chr(0b1010101 + 0o32) + chr(3289 - 3189) + chr(0b1100101))('\165' + chr(116) + '\x66' + chr(0b101101) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def WZmAnFbkSSBh(KW0sEfjlgNpM, gmOzD_aWO9K9): if ftfygxgFas5X(roI3spqORKae(gmOzD_aWO9K9, roI3spqORKae(ES5oEprVxulp(b'\x97\x08w,u\xcd\xc5\x83Mb\xd7'), chr(100) + '\145' + chr(0b111010 + 0o51) + '\157' + '\x64' + chr(1904 - 1803))(chr(0b1110101) + chr(7945 - 7829) + chr(102) + chr(866 - 821) + chr(56)))) >= nzTpIcepk0o8('\060' + '\x6f' + '\x32' + '\060', 37926 - 37918): return [gmOzD_aWO9K9] EHtBTS01vrm7 = ofBs4ZktVP6z.find_compartment_id_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x99'), chr(100) + chr(101) + '\143' + '\157' + chr(0b1100100) + '\145')(chr(117) + '\x74' + chr(0b10110 + 0o120) + '\055' + chr(0b1000 + 0o60))) fWWnOvFKhGtb = [roI3spqORKae(ES5oEprVxulp(b'\xb7#[\x00$'), chr(9889 - 9789) + chr(0b1100101) + chr(0b1100011) + chr(0b1101111) + chr(100) + chr(0b100 + 0o141))('\x75' + chr(5373 - 5257) + '\x66' + chr(0b101101) + '\x38'), roI3spqORKae(ES5oEprVxulp(b'\xb7#[\x00%'), '\144' + '\x65' + chr(9087 - 8988) + '\x6f' + chr(5139 - 5039) + chr(9760 - 9659))(chr(0b1110101) + chr(12424 - 12308) + chr(0b1100110) + chr(45) + chr(56)), roI3spqORKae(ES5oEprVxulp(b'\xb7#[\x00 '), chr(100) + '\145' + chr(6189 - 6090) + '\157' + chr(0b1100100) + chr(0b1100101))(chr(0b1110101) + chr(116) + chr(102) + '\x2d' + '\x38'), roI3spqORKae(ES5oEprVxulp(b'\xb7#[\x00&'), chr(0b1100100) + chr(0b1100101) + chr(0b1001111 + 0o24) + chr(2218 - 2107) + '\144' + '\145')('\x75' + chr(0b10111 + 0o135) + '\146' + chr(0b101101) + chr(56)), roI3spqORKae(ES5oEprVxulp(b'\xb7#[\x00.'), chr(0b1100100) + chr(3148 - 3047) + chr(0b1010011 + 0o20) + '\157' + '\x64' + chr(0b1100101))('\165' + chr(0b1110100) + chr(102) + '\055' + '\070')] try: yXO_izI061Uc = Bvi71nNyvlqO([ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, dYApxmRvGyhb, EHtBTS01vrm7)[nzTpIcepk0o8('\060' + '\x6f' + chr(48), 0o10)] for dYApxmRvGyhb in fWWnOvFKhGtb]) except _1qUu0gKi9gH: yXO_izI061Uc = Bvi71nNyvlqO() wjX8Ux7gSdNg = aoTc4YA2bs2R.compile(roI3spqORKae(ES5oEprVxulp(b'\xa4\x16~eH\xf9\xc8\xc7CF\x89\xd6q_\xb0\x92\xaa\xb1\xcb'), chr(5333 - 5233) + chr(0b1100101) + chr(99) + '\157' + '\144' + chr(0b1100101))(chr(0b1110101) + chr(9924 - 9808) + chr(0b101110 + 0o70) + '\055' + chr(56)).q33KG3foQ_CJ(roI3spqORKae(ES5oEprVxulp(b'\x98\x04l v\xd1\xda'), chr(100) + chr(0b1 + 0o144) + chr(0b1100000 + 0o3) + chr(0b1101111) + '\x64' + chr(101))('\x75' + '\164' + chr(0b1100110) + chr(45) + '\070')), aoTc4YA2bs2R.IGNORECASE) Hzj6C8wP34z8 = Bvi71nNyvlqO(KW0sEfjlgNpM.metabolites.wKKXKFBlqW0G(wjX8Ux7gSdNg)) K3G5H7UCA3RY = Bvi71nNyvlqO(gmOzD_aWO9K9.metabolites) - yXO_izI061Uc - Hzj6C8wP34z8 CIoLIx35VSbm = Bvi71nNyvlqO() for dYApxmRvGyhb in K3G5H7UCA3RY: CIoLIx35VSbm = CIoLIx35VSbm | Bvi71nNyvlqO(dYApxmRvGyhb.reactions) return H4NoA26ON7iG(CIoLIx35VSbm)
opencobra/memote
memote/support/biomass.py
essential_precursors_not_in_biomass
def essential_precursors_not_in_biomass(model, reaction): u""" Return a list of essential precursors missing from the biomass reaction. There are universal components of life that make up the biomass of all known organisms. These include all proteinogenic amino acids, deoxy- and ribonucleotides, water and a range of metabolic cofactors. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- list IDs of essential metabolites missing from the biomass reaction. The IDS will appear in the models namespace if the metabolite exists, but will be using the MetaNetX namespace if the metabolite does not exist in the model. Notes ----- "Answering the question of what to include in the core of a biomass objective function is not always straightforward. One example is different nucleotide forms, which, although inter-convertible, are essential for cellular chemistry. We propose here that all essential and irreplaceable molecules for metabolism should be included in the biomass functions of genome scale metabolic models. In the special case of cofactors, when two forms of the same cofactor take part in the same reactions (such as NAD and NADH), only one form could be included for the sake of simplicity. When a class of cofactors includes active and non-active interconvertible forms, the active forms should be preferred. [1]_." Please note, that [1]_ also suggest to count C1 carriers (derivatives of tetrahydrofolate(B9) or tetrahydromethanopterin) as universal cofactors. We have omitted these from this check because there are many individual compounds that classify as C1 carriers, and it is not clear a priori which one should be preferred. In a future update, we may consider identifying these using a chemical ontology. References ---------- .. [1] Xavier, J. C., Patil, K. R., & Rocha, I. (2017). Integration of Biomass Formulations of Genome-Scale Metabolic Models with Experimental Data Reveals Universally Essential Cofactors in Prokaryotes. Metabolic Engineering, 39(October 2016), 200–208. http://doi.org/10.1016/j.ymben.2016.12.002 """ main_comp = helpers.find_compartment_id_in_model(model, 'c') biomass_eq = bundle_biomass_components(model, reaction) pooled_precursors = set( [met for rxn in biomass_eq for met in rxn.metabolites]) missing_essential_precursors = [] for mnx_id in ESSENTIAL_PRECURSOR_IDS: try: met = helpers.find_met_in_model(model, mnx_id, main_comp)[0] if met not in pooled_precursors: missing_essential_precursors.append(met.id) except RuntimeError: missing_essential_precursors.append(mnx_id) return missing_essential_precursors
python
def essential_precursors_not_in_biomass(model, reaction): u""" Return a list of essential precursors missing from the biomass reaction. There are universal components of life that make up the biomass of all known organisms. These include all proteinogenic amino acids, deoxy- and ribonucleotides, water and a range of metabolic cofactors. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- list IDs of essential metabolites missing from the biomass reaction. The IDS will appear in the models namespace if the metabolite exists, but will be using the MetaNetX namespace if the metabolite does not exist in the model. Notes ----- "Answering the question of what to include in the core of a biomass objective function is not always straightforward. One example is different nucleotide forms, which, although inter-convertible, are essential for cellular chemistry. We propose here that all essential and irreplaceable molecules for metabolism should be included in the biomass functions of genome scale metabolic models. In the special case of cofactors, when two forms of the same cofactor take part in the same reactions (such as NAD and NADH), only one form could be included for the sake of simplicity. When a class of cofactors includes active and non-active interconvertible forms, the active forms should be preferred. [1]_." Please note, that [1]_ also suggest to count C1 carriers (derivatives of tetrahydrofolate(B9) or tetrahydromethanopterin) as universal cofactors. We have omitted these from this check because there are many individual compounds that classify as C1 carriers, and it is not clear a priori which one should be preferred. In a future update, we may consider identifying these using a chemical ontology. References ---------- .. [1] Xavier, J. C., Patil, K. R., & Rocha, I. (2017). Integration of Biomass Formulations of Genome-Scale Metabolic Models with Experimental Data Reveals Universally Essential Cofactors in Prokaryotes. Metabolic Engineering, 39(October 2016), 200–208. http://doi.org/10.1016/j.ymben.2016.12.002 """ main_comp = helpers.find_compartment_id_in_model(model, 'c') biomass_eq = bundle_biomass_components(model, reaction) pooled_precursors = set( [met for rxn in biomass_eq for met in rxn.metabolites]) missing_essential_precursors = [] for mnx_id in ESSENTIAL_PRECURSOR_IDS: try: met = helpers.find_met_in_model(model, mnx_id, main_comp)[0] if met not in pooled_precursors: missing_essential_precursors.append(met.id) except RuntimeError: missing_essential_precursors.append(mnx_id) return missing_essential_precursors
[ "def", "essential_precursors_not_in_biomass", "(", "model", ",", "reaction", ")", ":", "main_comp", "=", "helpers", ".", "find_compartment_id_in_model", "(", "model", ",", "'c'", ")", "biomass_eq", "=", "bundle_biomass_components", "(", "model", ",", "reaction", ")", "pooled_precursors", "=", "set", "(", "[", "met", "for", "rxn", "in", "biomass_eq", "for", "met", "in", "rxn", ".", "metabolites", "]", ")", "missing_essential_precursors", "=", "[", "]", "for", "mnx_id", "in", "ESSENTIAL_PRECURSOR_IDS", ":", "try", ":", "met", "=", "helpers", ".", "find_met_in_model", "(", "model", ",", "mnx_id", ",", "main_comp", ")", "[", "0", "]", "if", "met", "not", "in", "pooled_precursors", ":", "missing_essential_precursors", ".", "append", "(", "met", ".", "id", ")", "except", "RuntimeError", ":", "missing_essential_precursors", ".", "append", "(", "mnx_id", ")", "return", "missing_essential_precursors" ]
u""" Return a list of essential precursors missing from the biomass reaction. There are universal components of life that make up the biomass of all known organisms. These include all proteinogenic amino acids, deoxy- and ribonucleotides, water and a range of metabolic cofactors. Parameters ---------- model : cobra.Model The metabolic model under investigation. reaction : cobra.core.reaction.Reaction The biomass reaction of the model under investigation. Returns ------- list IDs of essential metabolites missing from the biomass reaction. The IDS will appear in the models namespace if the metabolite exists, but will be using the MetaNetX namespace if the metabolite does not exist in the model. Notes ----- "Answering the question of what to include in the core of a biomass objective function is not always straightforward. One example is different nucleotide forms, which, although inter-convertible, are essential for cellular chemistry. We propose here that all essential and irreplaceable molecules for metabolism should be included in the biomass functions of genome scale metabolic models. In the special case of cofactors, when two forms of the same cofactor take part in the same reactions (such as NAD and NADH), only one form could be included for the sake of simplicity. When a class of cofactors includes active and non-active interconvertible forms, the active forms should be preferred. [1]_." Please note, that [1]_ also suggest to count C1 carriers (derivatives of tetrahydrofolate(B9) or tetrahydromethanopterin) as universal cofactors. We have omitted these from this check because there are many individual compounds that classify as C1 carriers, and it is not clear a priori which one should be preferred. In a future update, we may consider identifying these using a chemical ontology. References ---------- .. [1] Xavier, J. C., Patil, K. R., & Rocha, I. (2017). Integration of Biomass Formulations of Genome-Scale Metabolic Models with Experimental Data Reveals Universally Essential Cofactors in Prokaryotes. Metabolic Engineering, 39(October 2016), 200–208. http://doi.org/10.1016/j.ymben.2016.12.002
[ "u", "Return", "a", "list", "of", "essential", "precursors", "missing", "from", "the", "biomass", "reaction", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/support/biomass.py#L411-L477
train
u Return a list of essential precursors missing from the biomass reaction.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(111) + chr(50) + chr(0b0 + 0o66), ord("\x08")), nzTpIcepk0o8(chr(459 - 411) + chr(0b1010101 + 0o32) + chr(51) + chr(637 - 584) + '\066', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + '\x31' + chr(0b101101 + 0o10) + chr(0b110101), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110010) + chr(108 - 60) + '\062', 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b100010 + 0o20) + chr(0b10001 + 0o41) + chr(640 - 589), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(7607 - 7496) + chr(51) + '\x36' + chr(54), 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\067' + chr(0b11 + 0o64), 0o10), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(837 - 726) + chr(0b110010) + chr(0b10101 + 0o36) + '\x37', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110 + 0o53) + chr(0b110110) + '\x30', 19388 - 19380), nzTpIcepk0o8('\060' + chr(0b1100110 + 0o11) + chr(51) + chr(1451 - 1403) + chr(0b11001 + 0o32), ord("\x08")), nzTpIcepk0o8(chr(0b100011 + 0o15) + chr(111) + chr(49) + chr(256 - 208) + chr(100 - 46), 0b1000), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b1101111) + '\x35' + chr(0b110101), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(51) + chr(542 - 487) + '\061', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110001) + chr(0b101101 + 0o5) + '\062', 0b1000), nzTpIcepk0o8(chr(0b10111 + 0o31) + '\x6f' + chr(51) + chr(0b110011) + chr(52), 27838 - 27830), nzTpIcepk0o8('\060' + chr(111) + '\x33' + chr(1969 - 1919) + chr(2221 - 2168), 0b1000), nzTpIcepk0o8(chr(0b10010 + 0o36) + '\x6f' + chr(1292 - 1242) + chr(1156 - 1108), 0o10), nzTpIcepk0o8('\x30' + chr(0b1000100 + 0o53) + '\x32' + chr(0b110001 + 0o4) + '\064', 0o10), nzTpIcepk0o8(chr(48) + chr(0b101111 + 0o100) + chr(675 - 625) + '\x36' + '\x35', 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110101) + chr(0b10011 + 0o35), 0o10), nzTpIcepk0o8(chr(1890 - 1842) + chr(5267 - 5156) + chr(0b101000 + 0o13) + '\x31' + '\x37', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1010010 + 0o35) + chr(50) + '\066' + chr(0b101011 + 0o10), 0o10), nzTpIcepk0o8(chr(1191 - 1143) + chr(0b1101111) + '\x35' + chr(0b101 + 0o53), 8), nzTpIcepk0o8(chr(1263 - 1215) + chr(0b1011000 + 0o27) + chr(2205 - 2156) + '\064' + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101110 + 0o1) + chr(0b110101 + 0o2) + '\062', 0b1000), nzTpIcepk0o8(chr(0b1010 + 0o46) + chr(3503 - 3392) + chr(49) + '\x36', 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b0 + 0o66) + '\065', 0o10), nzTpIcepk0o8(chr(790 - 742) + '\x6f' + '\062' + chr(1120 - 1071) + chr(51), 0b1000), nzTpIcepk0o8(chr(0b101011 + 0o5) + chr(0b1010101 + 0o32) + chr(1918 - 1867) + chr(1751 - 1702) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(1501 - 1452) + '\060' + '\067', 49453 - 49445), nzTpIcepk0o8(chr(0b110000) + chr(0b1100010 + 0o15) + chr(0b101 + 0o55) + chr(0b110010) + chr(1963 - 1908), 18087 - 18079), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(111) + chr(0b11 + 0o60) + chr(854 - 801) + chr(0b110110), 8), nzTpIcepk0o8('\060' + chr(0b1000000 + 0o57) + chr(53) + chr(0b101001 + 0o12), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(53) + '\x30', 8), nzTpIcepk0o8('\060' + '\157' + chr(0b110000 + 0o3) + chr(53) + '\x35', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(49) + '\062' + chr(1617 - 1566), 0b1000), nzTpIcepk0o8(chr(0b100011 + 0o15) + chr(0b101010 + 0o105) + chr(537 - 488) + chr(1538 - 1489) + chr(54), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(1714 - 1663) + '\x35', 0o10), nzTpIcepk0o8(chr(0b10010 + 0o36) + chr(0b1101111) + chr(0b110 + 0o57) + chr(0b110001), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110101) + '\060', 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'8'), chr(100) + chr(0b10110 + 0o117) + chr(0b1100011) + chr(1325 - 1214) + '\144' + '\x65')('\x75' + '\x74' + chr(4110 - 4008) + chr(45) + chr(0b10010 + 0o46)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Vm6GE6DLrkR9(KW0sEfjlgNpM, gmOzD_aWO9K9): O7L4hqjWbviB = ofBs4ZktVP6z.find_compartment_id_in_model(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'u'), chr(0b1000100 + 0o40) + '\x65' + chr(0b1100011) + '\157' + chr(0b1100100) + chr(101))(chr(0b1010010 + 0o43) + '\164' + chr(102) + chr(0b100011 + 0o12) + chr(56))) YIRS02fLev9k = WZmAnFbkSSBh(KW0sEfjlgNpM, gmOzD_aWO9K9) rDTNljkbp6o9 = Bvi71nNyvlqO([dYApxmRvGyhb for cXXyzqlAJbZW in YIRS02fLev9k for dYApxmRvGyhb in cXXyzqlAJbZW.metabolites]) h0GQhYy8ALgV = [] for PjqmDT4iatNz in yI6J561FAp04: try: dYApxmRvGyhb = ofBs4ZktVP6z.find_met_in_model(KW0sEfjlgNpM, PjqmDT4iatNz, O7L4hqjWbviB)[nzTpIcepk0o8(chr(561 - 513) + chr(0b1101111) + chr(0b110000), 0b1000)] if dYApxmRvGyhb not in rDTNljkbp6o9: roI3spqORKae(h0GQhYy8ALgV, roI3spqORKae(ES5oEprVxulp(b'^\xba>\xb6|\xf4\xb1P\xf5\x1f\x96s'), chr(8215 - 8115) + chr(0b0 + 0o145) + chr(0b1100011) + '\x6f' + chr(0b1100100) + chr(101))(chr(0b1110101) + chr(2915 - 2799) + chr(1187 - 1085) + chr(0b11001 + 0o24) + '\070'))(roI3spqORKae(dYApxmRvGyhb, roI3spqORKae(ES5oEprVxulp(b'{\x8f!\xecH\xf4\xcep\xaa\n\x93\x12'), chr(3294 - 3194) + chr(0b1001111 + 0o26) + '\143' + '\x6f' + chr(5420 - 5320) + chr(101))(chr(117) + '\x74' + '\146' + chr(0b11010 + 0o23) + chr(0b100011 + 0o25)))) except _1qUu0gKi9gH: roI3spqORKae(h0GQhYy8ALgV, roI3spqORKae(ES5oEprVxulp(b'^\xba>\xb6|\xf4\xb1P\xf5\x1f\x96s'), '\x64' + chr(0b1100101) + chr(0b1000001 + 0o42) + chr(0b1101111) + '\144' + '\145')(chr(0b1001111 + 0o46) + chr(0b11011 + 0o131) + chr(8794 - 8692) + chr(0b101100 + 0o1) + '\x38'))(PjqmDT4iatNz) return h0GQhYy8ALgV
opencobra/memote
memote/suite/cli/callbacks.py
validate_experimental
def validate_experimental(context, param, value): """Load and validate an experimental data configuration.""" if value is None: return config = ExperimentConfiguration(value) config.validate() return config
python
def validate_experimental(context, param, value): """Load and validate an experimental data configuration.""" if value is None: return config = ExperimentConfiguration(value) config.validate() return config
[ "def", "validate_experimental", "(", "context", ",", "param", ",", "value", ")", ":", "if", "value", "is", "None", ":", "return", "config", "=", "ExperimentConfiguration", "(", "value", ")", "config", ".", "validate", "(", ")", "return", "config" ]
Load and validate an experimental data configuration.
[ "Load", "and", "validate", "an", "experimental", "data", "configuration", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/cli/callbacks.py#L44-L50
train
Load and validate an experimental data configuration.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(6654 - 6543) + chr(0b10011 + 0o40) + chr(1074 - 1022) + chr(2596 - 2545), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110011 + 0o0) + '\x30' + chr(0b1001 + 0o54), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(11700 - 11589) + chr(0b110010) + chr(214 - 166) + chr(0b11011 + 0o31), ord("\x08")), nzTpIcepk0o8(chr(2226 - 2178) + chr(0b1101111) + chr(0b110001) + '\064' + chr(0b110010), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1010100 + 0o33) + chr(2600 - 2549) + chr(0b110110) + chr(55), 0b1000), nzTpIcepk0o8(chr(298 - 250) + chr(0b1010111 + 0o30) + chr(1658 - 1608) + chr(0b110000) + chr(0b110100), 8), nzTpIcepk0o8(chr(48) + chr(8091 - 7980) + chr(51) + chr(2459 - 2405) + chr(0b10100 + 0o42), 61618 - 61610), nzTpIcepk0o8(chr(48) + chr(0b11101 + 0o122) + '\062' + '\x30' + '\060', 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(49) + chr(53) + '\064', 0b1000), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(111) + chr(0b10000 + 0o47), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x31' + chr(0b110110) + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110011) + chr(0b110010) + chr(1301 - 1252), 43796 - 43788), nzTpIcepk0o8('\x30' + '\157' + chr(246 - 195) + chr(48), ord("\x08")), nzTpIcepk0o8(chr(0b101000 + 0o10) + chr(0b1101111) + chr(0b110011) + chr(0b100111 + 0o12), 3231 - 3223), nzTpIcepk0o8('\060' + chr(5307 - 5196) + chr(50) + chr(0b101000 + 0o15), 30908 - 30900), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\063' + chr(0b1101 + 0o43) + chr(599 - 551), 48589 - 48581), nzTpIcepk0o8('\060' + chr(0b1011000 + 0o27) + '\x32' + '\062' + chr(55), ord("\x08")), nzTpIcepk0o8('\x30' + chr(9661 - 9550) + '\061' + chr(55) + chr(0b110101 + 0o2), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b10 + 0o60) + '\x34' + chr(791 - 737), ord("\x08")), nzTpIcepk0o8(chr(0b1000 + 0o50) + chr(111) + chr(0b110001) + chr(1283 - 1233) + chr(0b110010), 0b1000), nzTpIcepk0o8(chr(48) + chr(384 - 273) + chr(0b10110 + 0o36) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x31' + chr(0b110101) + chr(54), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + '\063' + chr(0b100001 + 0o22) + chr(54), 0b1000), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(0b1101111) + chr(2499 - 2445) + '\x34', 12865 - 12857), nzTpIcepk0o8('\x30' + chr(111) + chr(51) + '\x32' + '\063', 31143 - 31135), nzTpIcepk0o8(chr(0b11100 + 0o24) + '\157' + chr(0b100011 + 0o20) + chr(0b110011) + chr(1668 - 1617), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101001 + 0o6) + chr(853 - 802) + '\x34', 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(50) + chr(53), 8), nzTpIcepk0o8(chr(0b110000) + chr(0b1 + 0o156) + chr(51) + '\x35' + chr(54), 49938 - 49930), nzTpIcepk0o8('\060' + '\157' + chr(51) + '\065', 0b1000), nzTpIcepk0o8(chr(1732 - 1684) + '\x6f' + chr(0b110001) + chr(0b101111 + 0o10) + chr(0b110111), 8), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + '\x33' + '\x33', 30282 - 30274), nzTpIcepk0o8(chr(0b110000) + chr(2239 - 2128) + chr(0b110011) + chr(55) + '\061', 0b1000), nzTpIcepk0o8(chr(466 - 418) + chr(0b1100000 + 0o17) + chr(2220 - 2168) + '\x34', 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110011) + chr(48), 8), nzTpIcepk0o8('\060' + chr(111) + '\x32' + chr(0b110110) + chr(0b110110), 0o10), nzTpIcepk0o8('\x30' + '\157' + '\063' + chr(49) + chr(1264 - 1209), 0o10), nzTpIcepk0o8(chr(699 - 651) + '\x6f' + '\064' + chr(1642 - 1590), 8), nzTpIcepk0o8('\060' + chr(0b1101111) + '\062' + '\060' + chr(0b110000), 8), nzTpIcepk0o8(chr(48) + chr(0b1101001 + 0o6) + '\x32' + chr(48), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(0b1001001 + 0o46) + chr(160 - 107) + chr(1643 - 1595), ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xcd'), chr(0b1100100) + chr(0b1100100 + 0o1) + chr(99) + chr(11818 - 11707) + chr(0b1100100) + '\x65')(chr(117) + '\x74' + chr(102) + '\055' + chr(1955 - 1899)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def labzrpWGklu5(xwFiQMStTnzU, BDr7SxpOFXwl, uV9iBiw0y_Mp): if uV9iBiw0y_Mp is None: return kgkKUcD36lls = s7SE6IOGyDU0(uV9iBiw0y_Mp) roI3spqORKae(kgkKUcD36lls, roI3spqORKae(ES5oEprVxulp(b'\xa4\xf1\xb4\x06\x94\xd7\x95\xe3-A\x10\x93'), chr(100) + '\x65' + chr(0b100111 + 0o74) + '\x6f' + chr(0b1100100) + chr(6009 - 5908))(chr(0b1110101) + '\164' + '\146' + '\x2d' + chr(0b111000)))() return kgkKUcD36lls
opencobra/memote
memote/suite/cli/callbacks.py
probe_git
def probe_git(): """Return a git repository instance if it exists.""" try: repo = git.Repo() except git.InvalidGitRepositoryError: LOGGER.warning( "We highly recommend keeping your model in a git repository." " It allows you to track changes and to easily collaborate with" " others via online platforms such as https://github.com.\n") return if repo.is_dirty(): LOGGER.critical( "Please git commit or git stash all changes before running" " the memote suite.") sys.exit(1) return repo
python
def probe_git(): """Return a git repository instance if it exists.""" try: repo = git.Repo() except git.InvalidGitRepositoryError: LOGGER.warning( "We highly recommend keeping your model in a git repository." " It allows you to track changes and to easily collaborate with" " others via online platforms such as https://github.com.\n") return if repo.is_dirty(): LOGGER.critical( "Please git commit or git stash all changes before running" " the memote suite.") sys.exit(1) return repo
[ "def", "probe_git", "(", ")", ":", "try", ":", "repo", "=", "git", ".", "Repo", "(", ")", "except", "git", ".", "InvalidGitRepositoryError", ":", "LOGGER", ".", "warning", "(", "\"We highly recommend keeping your model in a git repository.\"", "\" It allows you to track changes and to easily collaborate with\"", "\" others via online platforms such as https://github.com.\\n\"", ")", "return", "if", "repo", ".", "is_dirty", "(", ")", ":", "LOGGER", ".", "critical", "(", "\"Please git commit or git stash all changes before running\"", "\" the memote suite.\"", ")", "sys", ".", "exit", "(", "1", ")", "return", "repo" ]
Return a git repository instance if it exists.
[ "Return", "a", "git", "repository", "instance", "if", "it", "exists", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/cli/callbacks.py#L79-L94
train
Return a git repository instance if it exists.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b11110 + 0o22) + chr(667 - 556) + '\063' + '\062' + chr(0b110111), 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(50) + '\x33' + chr(659 - 611), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(51) + chr(48) + chr(419 - 365), 0b1000), nzTpIcepk0o8(chr(1421 - 1373) + chr(111) + chr(0b110010 + 0o4) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(111) + chr(0b110001) + chr(0b110111 + 0o0) + '\066', ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + '\063' + chr(318 - 269) + '\x37', 0o10), nzTpIcepk0o8(chr(2278 - 2230) + '\x6f' + chr(55) + chr(2444 - 2392), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b110001) + chr(0b110010) + '\x31', 0o10), nzTpIcepk0o8(chr(0b100111 + 0o11) + chr(0b1101111) + chr(2355 - 2305) + chr(50) + chr(54), 0b1000), nzTpIcepk0o8(chr(0b110 + 0o52) + '\x6f' + chr(2111 - 2060) + chr(0b110110) + chr(52), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001) + chr(51) + chr(52), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110001) + chr(1789 - 1741) + chr(0b110111), 17793 - 17785), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x31' + '\x34' + chr(0b101111 + 0o7), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + '\061' + '\061' + chr(49), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(49), 31288 - 31280), nzTpIcepk0o8(chr(0b11001 + 0o27) + '\x6f' + '\x32' + '\063' + chr(0b1101 + 0o43), 8), nzTpIcepk0o8(chr(736 - 688) + '\x6f' + chr(50) + chr(0b11000 + 0o30) + chr(0b110001), 0o10), nzTpIcepk0o8(chr(801 - 753) + chr(111) + chr(49) + chr(0b11101 + 0o24) + chr(0b100 + 0o63), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(701 - 647) + '\x37', 0o10), nzTpIcepk0o8('\060' + '\157' + chr(0b110010 + 0o0) + '\066' + chr(52), 35903 - 35895), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\061' + chr(0b110010) + '\064', 65420 - 65412), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x33' + chr(55) + '\x34', ord("\x08")), nzTpIcepk0o8(chr(0b101010 + 0o6) + '\157' + '\062' + chr(0b110001), 16571 - 16563), nzTpIcepk0o8(chr(48) + '\157' + '\062' + chr(1232 - 1183) + '\067', 0b1000), nzTpIcepk0o8('\x30' + chr(11177 - 11066) + chr(0b110 + 0o53) + chr(0b100010 + 0o23) + chr(53), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(49) + '\064' + chr(0b110001), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(0b110011) + '\x32', 0o10), nzTpIcepk0o8(chr(48) + chr(8357 - 8246) + '\x31' + chr(55) + '\066', 8), nzTpIcepk0o8(chr(2098 - 2050) + chr(4484 - 4373) + chr(1835 - 1785) + chr(2183 - 2131) + '\x35', 51989 - 51981), nzTpIcepk0o8(chr(322 - 274) + '\157' + chr(1782 - 1731) + '\x34' + chr(53), 23559 - 23551), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x33' + chr(782 - 728) + chr(0b110000), ord("\x08")), nzTpIcepk0o8('\060' + chr(2447 - 2336) + chr(0b110010) + chr(0b101010 + 0o14) + '\x36', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(51) + chr(50), 8), nzTpIcepk0o8(chr(0b110000) + chr(0b100111 + 0o110) + chr(1476 - 1425) + chr(0b100010 + 0o25) + chr(0b110011), 2509 - 2501), nzTpIcepk0o8(chr(670 - 622) + chr(0b1101111) + '\x33' + chr(0b101 + 0o62) + chr(0b101 + 0o53), ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\061' + chr(1226 - 1178) + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(2250 - 2202) + chr(111) + chr(51) + chr(0b110011) + chr(53), ord("\x08")), nzTpIcepk0o8(chr(1214 - 1166) + chr(0b1001110 + 0o41) + chr(51) + chr(0b110010 + 0o2) + '\061', 15819 - 15811), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(712 - 663) + '\x35' + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(767 - 719) + chr(0b100111 + 0o110) + '\064', 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b11100 + 0o24) + '\x6f' + '\065' + '\x30', 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xf9'), '\x64' + chr(0b1001010 + 0o33) + chr(0b1100011) + chr(10090 - 9979) + chr(100) + '\x65')(chr(0b1110101) + chr(0b1101110 + 0o6) + chr(0b1100110) + '\055' + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def wwGCpmnZOwWE(): try: gyPTZcbjLCoJ = qSlwIbCC95rx.Repo() except roI3spqORKae(qSlwIbCC95rx, roI3spqORKae(ES5oEprVxulp(b'\x9e\xf6\xb0R\x12\xa6X\x16\xff\x80\x0e"\x16&r\xf1\xf5 E\xcd\x11\x8ec\xe0\x1f'), '\144' + chr(0b10111 + 0o116) + chr(0b1001101 + 0o26) + chr(111) + chr(3927 - 3827) + chr(0b1100101))('\x75' + chr(116) + chr(102) + '\x2d' + '\070')): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xa0\xf9\xb4]\x17\xa1['), chr(100) + chr(101) + '\143' + '\157' + '\x64' + chr(0b110100 + 0o61))(chr(117) + chr(0b110 + 0o156) + '\x66' + chr(45) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'\x80\xfd\xe6[\x17\xa8T=\xef\xd4."\x05&l\xf5\xe4!S\x94?\x99t\xff\x04\x0f}^\xdc\x8a\x85\xc4:\x96\x97%\xb8\x8dKm\xb9\xb8\xa7\x13\x19\xa6Hq\xe4\x91,(\x15 u\xf7\xf36\x19\x94\x1d\x881\xee\x01\ru\t\xd6\xc5\x89\xd9o\xdb\x8c.\xfd\x95\x19e\xb4\xf3\xe6P\x16\xaeR6\xf3\x87|&\x08-!\xec\xeeoR\xd5\'\x95}\xf6M\x02u\x12\xc9\x84\x92\xd9h\x9a\x8c$\xfd\x96\x02p\xbf\xb8\xa9G\x16\xaaN"\xb6\x825&F&o\xf4\xe8!R\x94$\x90p\xfb\x0b\x0eh\x13\xd6\xc5\x83\xc3y\x93\xd8 \xae\xc1\x03p\xa3\xe8\xb5\tQ\xe0[8\xe2\x9c)%H*n\xf5\xafE'), chr(3970 - 3870) + '\x65' + chr(99) + chr(779 - 668) + chr(4297 - 4197) + chr(0b1100101))(chr(6311 - 6194) + chr(116) + chr(0b101010 + 0o74) + '\055' + '\x38')) return if roI3spqORKae(gyPTZcbjLCoJ, roI3spqORKae(ES5oEprVxulp(b'\xbe\xeb\x99W\x17\xbdH('), '\x64' + '\145' + chr(0b1100011) + chr(111) + chr(0b1100100) + chr(0b1100101))(chr(10967 - 10850) + '\164' + chr(0b1100110) + chr(1566 - 1521) + chr(0b111000)))(): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xb4\xea\xafG\x17\xac]='), chr(0b1100100) + chr(0b11001 + 0o114) + chr(99) + '\157' + chr(100) + chr(0b110001 + 0o64))('\x75' + '\164' + chr(6279 - 6177) + chr(45) + '\070'))(roI3spqORKae(ES5oEprVxulp(b'\x87\xf4\xa3R\r\xaa\x1c6\xff\x80|$\t$l\xf1\xf5oX\xc6t\x9bx\xfbM\x12n\x1f\xd6\x8d\xd0\xd7v\x97\xd8"\xb5\x80\x05c\xb2\xeb\xe6Q\x1b\xa9S#\xf3\xd4.2\x08\'h\xf6\xe6oC\xdc1\xdc|\xea\x00\x0en\x1b\x85\x96\x85\xdfn\x9e\xd6'), '\x64' + chr(101) + chr(0b11001 + 0o112) + chr(0b1101111) + chr(0b111101 + 0o47) + '\x65')('\165' + chr(0b1110100) + '\x66' + chr(0b101101) + chr(0b1110 + 0o52))) roI3spqORKae(bpyfpu4kTbwL, roI3spqORKae(ES5oEprVxulp(b'\x8d\xed\xb4Y\x1d\x9ap`\xe5\x87\x1d\x7f'), '\144' + '\145' + '\x63' + '\x6f' + chr(100) + chr(9177 - 9076))(chr(0b1110101) + chr(116) + chr(102) + chr(0b11011 + 0o22) + '\070'))(nzTpIcepk0o8('\x30' + chr(3264 - 3153) + chr(1343 - 1294), 8)) return gyPTZcbjLCoJ
opencobra/memote
memote/suite/cli/callbacks.py
git_installed
def git_installed(): """Interrupt execution of memote if `git` has not been installed.""" LOGGER.info("Checking `git` installation.") try: check_output(['git', '--version']) except CalledProcessError as e: LOGGER.critical( "The execution of memote was interrupted since no installation of " "`git` could be detected. Please install git to use " "this functionality: " "https://git-scm.com/book/en/v2/Getting-Started-Installing-Git") LOGGER.debug("Underlying error:", exc_info=e) sys.exit(1)
python
def git_installed(): """Interrupt execution of memote if `git` has not been installed.""" LOGGER.info("Checking `git` installation.") try: check_output(['git', '--version']) except CalledProcessError as e: LOGGER.critical( "The execution of memote was interrupted since no installation of " "`git` could be detected. Please install git to use " "this functionality: " "https://git-scm.com/book/en/v2/Getting-Started-Installing-Git") LOGGER.debug("Underlying error:", exc_info=e) sys.exit(1)
[ "def", "git_installed", "(", ")", ":", "LOGGER", ".", "info", "(", "\"Checking `git` installation.\"", ")", "try", ":", "check_output", "(", "[", "'git'", ",", "'--version'", "]", ")", "except", "CalledProcessError", "as", "e", ":", "LOGGER", ".", "critical", "(", "\"The execution of memote was interrupted since no installation of \"", "\"`git` could be detected. Please install git to use \"", "\"this functionality: \"", "\"https://git-scm.com/book/en/v2/Getting-Started-Installing-Git\"", ")", "LOGGER", ".", "debug", "(", "\"Underlying error:\"", ",", "exc_info", "=", "e", ")", "sys", ".", "exit", "(", "1", ")" ]
Interrupt execution of memote if `git` has not been installed.
[ "Interrupt", "execution", "of", "memote", "if", "git", "has", "not", "been", "installed", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/cli/callbacks.py#L103-L115
train
Interrupt execution of memote if git has not been installed.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(49) + chr(0b110001) + chr(0b1010 + 0o53), 64438 - 64430), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(0b1100110 + 0o11) + chr(0b110010) + chr(0b101100 + 0o6) + chr(48), 6176 - 6168), nzTpIcepk0o8(chr(48) + chr(8421 - 8310) + chr(0b110011) + '\x36', 40559 - 40551), nzTpIcepk0o8('\060' + chr(111) + chr(1118 - 1068) + chr(53) + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(11648 - 11537) + '\x32' + chr(0b110000) + '\067', 25722 - 25714), nzTpIcepk0o8(chr(765 - 717) + chr(3916 - 3805) + chr(55) + '\060', 0o10), nzTpIcepk0o8(chr(378 - 330) + chr(539 - 428) + chr(49) + chr(468 - 418) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(2234 - 2186) + chr(0b1101111) + '\067' + chr(0b10000 + 0o47), 0b1000), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(11856 - 11745) + chr(2022 - 1973) + '\062' + chr(0b110001), 60427 - 60419), nzTpIcepk0o8('\x30' + '\x6f' + chr(52) + chr(0b1001 + 0o50), 0o10), nzTpIcepk0o8(chr(2066 - 2018) + '\x6f' + chr(49) + chr(0b110111) + '\066', 0o10), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b1101111) + chr(49) + '\x34' + chr(48), 26410 - 26402), nzTpIcepk0o8('\x30' + chr(0b100 + 0o153) + chr(50) + chr(0b110001) + chr(0b101100 + 0o4), 7829 - 7821), nzTpIcepk0o8(chr(48) + chr(0b1 + 0o156) + chr(0b110010) + chr(52), 57490 - 57482), nzTpIcepk0o8('\060' + '\157' + chr(0b100101 + 0o14) + chr(0b110001), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(3970 - 3859) + chr(817 - 767) + chr(0b110011) + chr(1460 - 1412), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(8314 - 8203) + chr(49) + chr(0b10 + 0o57) + chr(53), 8), nzTpIcepk0o8(chr(0b101 + 0o53) + chr(5508 - 5397) + chr(0b1 + 0o62) + '\061' + chr(0b110010), 0o10), nzTpIcepk0o8(chr(1077 - 1029) + '\157' + '\x33' + '\065', 0o10), nzTpIcepk0o8(chr(52 - 4) + chr(1874 - 1763) + chr(0b10111 + 0o34) + chr(0b110001) + chr(0b10011 + 0o40), ord("\x08")), nzTpIcepk0o8(chr(810 - 762) + '\157' + chr(0b110010) + '\x30' + '\x30', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(51) + chr(0b100001 + 0o25) + '\063', 32879 - 32871), nzTpIcepk0o8(chr(0b0 + 0o60) + '\x6f' + chr(514 - 464) + chr(253 - 200) + chr(2364 - 2315), 16138 - 16130), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b101100 + 0o5) + chr(0b101101 + 0o5), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + '\065' + '\061', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1100100 + 0o13) + '\063' + chr(54) + chr(874 - 825), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(3307 - 3196) + chr(0b10110 + 0o35) + '\064' + chr(0b110110), 62665 - 62657), nzTpIcepk0o8(chr(48) + chr(3108 - 2997) + '\062', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + '\061' + '\064' + chr(51), 44398 - 44390), nzTpIcepk0o8(chr(0b100010 + 0o16) + chr(111) + chr(0b110001) + chr(0b110001 + 0o2) + chr(0b1111 + 0o46), 35550 - 35542), nzTpIcepk0o8(chr(0b110000) + chr(11876 - 11765) + chr(0b100000 + 0o22) + '\x34' + '\062', 32280 - 32272), nzTpIcepk0o8(chr(0b110000) + chr(2502 - 2391) + chr(49) + chr(602 - 550), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(0b11110 + 0o26) + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b1011 + 0o46) + chr(0b10100 + 0o35) + chr(1508 - 1457), 23121 - 23113), nzTpIcepk0o8(chr(1753 - 1705) + chr(0b111100 + 0o63) + chr(840 - 790) + chr(1158 - 1105) + chr(0b100011 + 0o24), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\061' + '\x36' + chr(50), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(2021 - 1972) + '\063' + '\063', 56295 - 56287), nzTpIcepk0o8(chr(48) + chr(5458 - 5347) + chr(50) + '\062' + '\066', 54377 - 54369), nzTpIcepk0o8(chr(0b110000) + chr(9529 - 9418) + chr(0b110010) + '\x30' + chr(1729 - 1675), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1011110 + 0o21) + '\062' + chr(0b111 + 0o55) + chr(0b11111 + 0o27), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1139 - 1091) + chr(111) + chr(0b1010 + 0o53) + chr(0b110000), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'c'), chr(0b1100100) + '\145' + chr(99) + chr(11705 - 11594) + '\144' + chr(0b1000011 + 0o42))('\165' + chr(0b1110100) + chr(0b10 + 0o144) + chr(0b101101) + chr(304 - 248)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def w6avfkEt2K_w(): roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'$\xe8P\xd4\xbet#``F\x0c/'), chr(4297 - 4197) + chr(101) + chr(99) + '\x6f' + chr(0b111110 + 0o46) + chr(0b11011 + 0o112))('\x75' + chr(0b1110100) + chr(0b1100110) + '\x2d' + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'\x0e\xf8{\xcf\xecQ:XqA\x19\t\xfct)\xf1#\xb9i\xaa\xec\x9f\xc8~@\x9e\x88,'), chr(0b1110 + 0o126) + chr(0b1000011 + 0o42) + chr(0b10001 + 0o122) + '\x6f' + chr(0b1000 + 0o134) + '\145')(chr(0b1110101) + '\x74' + chr(102) + chr(1871 - 1826) + chr(56))) try: zWirJdUT4or9([roI3spqORKae(ES5oEprVxulp(b'*\xf9j'), '\144' + chr(3299 - 3198) + chr(4624 - 4525) + '\x6f' + chr(100) + chr(0b100111 + 0o76))(chr(117) + chr(116) + chr(102) + chr(54 - 9) + '\070'), roI3spqORKae(ES5oEprVxulp(b'`\xbdh\xc9\xf5K=P?'), '\x64' + chr(101) + chr(0b110010 + 0o61) + chr(0b100110 + 0o111) + '\144' + chr(0b1100101))('\165' + '\164' + chr(9832 - 9730) + chr(0b101101) + chr(2385 - 2329))]) except cxFc1cVf7BnY as wgf0sgcu_xPL: roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'.\xe2w\xd8\xee[5S'), '\x64' + chr(0b1100101) + chr(0b110011 + 0o60) + chr(0b1101111) + chr(9248 - 9148) + chr(6427 - 6326))('\165' + chr(7211 - 7095) + chr(0b1100110) + chr(45) + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'\x19\xf8{\x8c\xe2@1\\$U\x17\x0f\xe64f\xfem\xa7x\xa6\xef\x87\xcc*^\x90\x95"\n3\xd6iT9\xda\x02/\xf3\xe2\x86>\xf9p\xcf\xe2\x18:PqH\x10\x13\xfcue\xf4,\xbet\xa4\xee\xd3\xc6l\t\x91\x81k\x17=\x82oI>\xc3\x16{\xf4\xe3\x86)\xf5j\xc9\xe4L1[\x7f\x01.\x0c\xeduz\xfdm\xa3s\xb8\xf4\x92\xc5f\t\x96\x8fvC)\xcd,S8\xcaR/\xfe\xef\xd5m\xf6k\xc2\xe4L=P?@\x12\t\xfcm3\xb8%\xbei\xbb\xf3\xc9\x86%N\x98\x92/\x10>\xcf"E$\xc2]9\xf9\xe9\xcdb\xf5p\x83\xf1\n{x4U\n\t\xe6s$\xcb9\xabo\xbf\xe5\x97\x84CG\x82\x92c\x0f1\xcbbAf\xe8\x1b/'), chr(0b1100100) + chr(8908 - 8807) + '\143' + chr(0b1101111) + chr(100) + chr(0b1100101))('\x75' + '\164' + chr(6465 - 6363) + chr(45) + chr(0b1010 + 0o56))) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b"*\xd1'\xf6\xbe\\;\t\x04L;:"), chr(4992 - 4892) + '\x65' + '\x63' + chr(0b1101111) + chr(0b101000 + 0o74) + '\145')(chr(117) + '\x74' + chr(102) + '\055' + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'\x18\xfez\xc9\xf5T-V?F^\x05\xfaff\xeaw'), '\x64' + chr(0b1011110 + 0o7) + chr(759 - 660) + '\157' + chr(100) + chr(944 - 843))(chr(0b1110101) + chr(5603 - 5487) + '\x66' + chr(0b1111 + 0o36) + chr(56)), exc_info=wgf0sgcu_xPL) roI3spqORKae(bpyfpu4kTbwL, roI3spqORKae(ES5oEprVxulp(b'\x17\xe5l\xc6\xe4m\x18\x0e"R?X'), '\144' + '\x65' + chr(0b1100011) + chr(0b1101111) + '\x64' + chr(0b101111 + 0o66))(chr(117) + chr(0b110101 + 0o77) + '\146' + chr(0b10001 + 0o34) + '\x38'))(nzTpIcepk0o8(chr(319 - 271) + chr(12071 - 11960) + chr(49), 54977 - 54969))
opencobra/memote
memote/suite/results/repo_result_manager.py
RepoResultManager.record_git_info
def record_git_info(self, commit=None): """ Record git meta information. Parameters ---------- commit : str, optional Unique hexsha of the desired commit. Returns ------- GitInfo Git commit meta information. """ if commit is None: commit = self._repo.head.commit else: commit = self._repo.commit(commit) return GitInfo( hexsha=commit.hexsha, author=commit.author.name, email=commit.author.email, authored_on=commit.authored_datetime )
python
def record_git_info(self, commit=None): """ Record git meta information. Parameters ---------- commit : str, optional Unique hexsha of the desired commit. Returns ------- GitInfo Git commit meta information. """ if commit is None: commit = self._repo.head.commit else: commit = self._repo.commit(commit) return GitInfo( hexsha=commit.hexsha, author=commit.author.name, email=commit.author.email, authored_on=commit.authored_datetime )
[ "def", "record_git_info", "(", "self", ",", "commit", "=", "None", ")", ":", "if", "commit", "is", "None", ":", "commit", "=", "self", ".", "_repo", ".", "head", ".", "commit", "else", ":", "commit", "=", "self", ".", "_repo", ".", "commit", "(", "commit", ")", "return", "GitInfo", "(", "hexsha", "=", "commit", ".", "hexsha", ",", "author", "=", "commit", ".", "author", ".", "name", ",", "email", "=", "commit", ".", "author", ".", "email", ",", "authored_on", "=", "commit", ".", "authored_datetime", ")" ]
Record git meta information. Parameters ---------- commit : str, optional Unique hexsha of the desired commit. Returns ------- GitInfo Git commit meta information.
[ "Record", "git", "meta", "information", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/results/repo_result_manager.py#L61-L85
train
Return GitInfo object for the specified commit.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b100000 + 0o20) + chr(0b101101 + 0o102) + chr(50) + '\063' + chr(0b110000 + 0o2), ord("\x08")), nzTpIcepk0o8(chr(0b11010 + 0o26) + chr(111) + chr(2555 - 2504) + chr(0b110100) + '\x35', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + chr(55) + chr(2916 - 2861), 8158 - 8150), nzTpIcepk0o8('\060' + '\x6f' + '\x32' + chr(0b110000) + chr(55), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\063' + chr(0b10000 + 0o45) + '\x30', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110001) + chr(295 - 245) + '\x35', 0b1000), nzTpIcepk0o8('\x30' + chr(2191 - 2080) + chr(49) + chr(0b110011) + '\063', ord("\x08")), nzTpIcepk0o8(chr(558 - 510) + chr(0b11101 + 0o122) + chr(0b110011 + 0o3) + '\x32', 34735 - 34727), nzTpIcepk0o8('\x30' + '\157' + chr(0b110011 + 0o0) + chr(172 - 121) + '\x31', 0b1000), nzTpIcepk0o8(chr(1106 - 1058) + chr(12039 - 11928) + chr(0b110001) + chr(0b110010) + chr(0b1100 + 0o50), 22144 - 22136), nzTpIcepk0o8(chr(48) + chr(4345 - 4234) + '\x31' + '\061' + chr(416 - 368), 0o10), nzTpIcepk0o8('\060' + chr(9528 - 9417) + chr(50) + '\063', 49488 - 49480), nzTpIcepk0o8('\x30' + chr(111) + chr(49) + chr(1767 - 1715) + '\061', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(9772 - 9661) + chr(0b110001) + '\x35' + chr(1904 - 1856), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b1010 + 0o53) + '\062', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1001010 + 0o45) + chr(51) + chr(0b11011 + 0o32) + '\066', 33957 - 33949), nzTpIcepk0o8('\x30' + '\x6f' + chr(224 - 175) + chr(49) + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x31' + '\x34' + '\x30', 58248 - 58240), nzTpIcepk0o8('\x30' + chr(0b1000000 + 0o57) + chr(0b110101) + chr(55), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b100000 + 0o21) + chr(53) + chr(51), 65483 - 65475), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110001) + chr(0b110101), 0b1000), nzTpIcepk0o8('\x30' + chr(5045 - 4934) + chr(0b100 + 0o55) + chr(50) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(0b100011 + 0o15) + chr(111) + chr(50) + chr(0b110000) + chr(0b1111 + 0o42), 0o10), nzTpIcepk0o8(chr(1033 - 985) + chr(0b111100 + 0o63) + chr(0b101101 + 0o6) + chr(49) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(0b1100111 + 0o10) + '\062' + '\066', 18331 - 18323), nzTpIcepk0o8(chr(1162 - 1114) + '\157' + chr(0b110010 + 0o2) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b10110 + 0o131) + chr(1877 - 1826) + chr(50) + '\062', 23459 - 23451), nzTpIcepk0o8(chr(0b10 + 0o56) + '\157' + chr(49) + chr(1542 - 1494) + chr(0b110001), 0o10), nzTpIcepk0o8(chr(0b111 + 0o51) + chr(0b1101111) + '\062' + chr(0b110000) + chr(0b110001), 8), nzTpIcepk0o8('\060' + chr(111) + chr(52) + chr(0b110111), 8), nzTpIcepk0o8(chr(407 - 359) + chr(111) + chr(0b110010) + chr(0b110100) + '\x35', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b10100 + 0o37) + '\x30' + chr(1808 - 1754), 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\061' + chr(2198 - 2146) + chr(48), 8), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(1123 - 1072) + chr(0b110101) + chr(0b110101), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + '\061' + chr(48), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(829 - 778) + '\065' + '\064', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(51) + chr(0b110101) + '\x35', 8), nzTpIcepk0o8(chr(0b1000 + 0o50) + '\157' + '\062' + '\x36' + chr(0b10 + 0o62), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b11110 + 0o121) + chr(50) + chr(48) + chr(324 - 273), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(2095 - 2046) + chr(0b110110) + chr(0b110100), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(95 - 47) + chr(2030 - 1919) + chr(53) + '\060', ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xb4'), '\144' + chr(0b1111 + 0o126) + chr(820 - 721) + '\157' + '\x64' + chr(0b11101 + 0o110))(chr(0b1110101) + '\x74' + '\x66' + chr(0b101101) + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def AFT9FF65lB4Q(hXMPsSrOQzbh, An6zT8UjKIsO=None): if An6zT8UjKIsO is None: An6zT8UjKIsO = hXMPsSrOQzbh._repo.head.An6zT8UjKIsO else: An6zT8UjKIsO = hXMPsSrOQzbh._repo.An6zT8UjKIsO(An6zT8UjKIsO) return kZqR0DBnk3l_(hexsha=roI3spqORKae(An6zT8UjKIsO, roI3spqORKae(ES5oEprVxulp(b'\xd0\x8a\x0f\xb3\x8d\x1e\x1cU\xb1<qz'), '\144' + chr(2500 - 2399) + '\x63' + chr(0b1101111) + '\144' + chr(0b1010 + 0o133))(chr(0b1 + 0o164) + '\164' + chr(5118 - 5016) + chr(0b101101) + '\x38')), author=roI3spqORKae(An6zT8UjKIsO.author, roI3spqORKae(ES5oEprVxulp(b'\xc9\xa9i\xc5\xda\x17\x0bs\x869\x01v'), '\144' + '\x65' + chr(0b1011011 + 0o10) + chr(111) + chr(9060 - 8960) + chr(4231 - 4130))('\165' + chr(0b1011100 + 0o30) + chr(3308 - 3206) + chr(45) + chr(56))), email=roI3spqORKae(An6zT8UjKIsO.author, roI3spqORKae(ES5oEprVxulp(b'\xd8\x8dH\xcc\x9e\x11:j\xad=\x02{'), '\x64' + '\145' + '\143' + chr(5303 - 5192) + chr(0b1100100) + chr(7739 - 7638))(chr(117) + '\164' + chr(7565 - 7463) + '\x2d' + chr(2357 - 2301))), authored_on=roI3spqORKae(An6zT8UjKIsO, roI3spqORKae(ES5oEprVxulp(b"\xfb\x90K\xef\x87'>V\x860)g\x04\x1cC\x83."), chr(0b1000011 + 0o41) + chr(9490 - 9389) + chr(0b1001001 + 0o32) + chr(5162 - 5051) + chr(198 - 98) + chr(0b111100 + 0o51))('\x75' + chr(0b1110100) + chr(0b1001110 + 0o30) + chr(45) + '\070')))
opencobra/memote
memote/suite/results/repo_result_manager.py
RepoResultManager.add_git
def add_git(meta, git_info): """Enrich the result meta information with commit data.""" meta["hexsha"] = git_info.hexsha meta["author"] = git_info.author meta["email"] = git_info.email meta["authored_on"] = git_info.authored_on.isoformat(" ")
python
def add_git(meta, git_info): """Enrich the result meta information with commit data.""" meta["hexsha"] = git_info.hexsha meta["author"] = git_info.author meta["email"] = git_info.email meta["authored_on"] = git_info.authored_on.isoformat(" ")
[ "def", "add_git", "(", "meta", ",", "git_info", ")", ":", "meta", "[", "\"hexsha\"", "]", "=", "git_info", ".", "hexsha", "meta", "[", "\"author\"", "]", "=", "git_info", ".", "author", "meta", "[", "\"email\"", "]", "=", "git_info", ".", "email", "meta", "[", "\"authored_on\"", "]", "=", "git_info", ".", "authored_on", ".", "isoformat", "(", "\" \"", ")" ]
Enrich the result meta information with commit data.
[ "Enrich", "the", "result", "meta", "information", "with", "commit", "data", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/results/repo_result_manager.py#L106-L111
train
Enrich the result meta information with commit data.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(11942 - 11831) + '\062' + chr(2052 - 2003) + chr(53), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001) + chr(53) + '\061', 2735 - 2727), nzTpIcepk0o8(chr(48) + '\157' + '\x32' + chr(0b110010) + chr(0b110001), 0o10), nzTpIcepk0o8(chr(0b100000 + 0o20) + chr(2279 - 2168) + '\061' + chr(904 - 852), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b10000 + 0o137) + chr(0b10000 + 0o46) + chr(283 - 232), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(1296 - 1242) + '\x34', 53779 - 53771), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b100111 + 0o12) + chr(0b110110) + chr(50), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b111 + 0o54) + chr(0b100111 + 0o12) + chr(2270 - 2221), 22594 - 22586), nzTpIcepk0o8('\x30' + '\157' + '\063' + chr(0b1101 + 0o51) + '\064', 0o10), nzTpIcepk0o8('\x30' + chr(0b11101 + 0o122) + chr(0b110011) + '\x32' + chr(0b101001 + 0o12), 0o10), nzTpIcepk0o8(chr(1600 - 1552) + chr(11133 - 11022) + chr(52) + chr(1554 - 1501), 0b1000), nzTpIcepk0o8(chr(0b101100 + 0o4) + '\157' + '\063' + chr(0b110111), 38633 - 38625), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(1292 - 1243) + '\060' + chr(0b100100 + 0o21), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(53) + '\062', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b101000 + 0o11) + chr(0b110100) + chr(48), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(0b110011) + '\x31' + chr(333 - 278), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + '\x34' + '\x32', 0o10), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(111) + '\x32' + '\066' + chr(0b110101), 0b1000), nzTpIcepk0o8('\060' + chr(111) + '\061' + '\066' + '\x35', 0o10), nzTpIcepk0o8(chr(2090 - 2042) + '\157' + '\x32' + chr(0b10110 + 0o41) + '\063', ord("\x08")), nzTpIcepk0o8(chr(1202 - 1154) + chr(111) + chr(1891 - 1840) + chr(0b110110) + '\x32', 0b1000), nzTpIcepk0o8(chr(1097 - 1049) + chr(8190 - 8079) + '\062' + chr(0b110111), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(1518 - 1468) + chr(53), 0b1000), nzTpIcepk0o8(chr(1815 - 1767) + chr(111) + chr(49) + chr(50) + '\062', ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010) + chr(51) + chr(0b11010 + 0o31), 51953 - 51945), nzTpIcepk0o8('\060' + '\x6f' + '\061' + '\x32' + '\x37', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(730 - 680) + '\060' + chr(0b110000), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(8541 - 8430) + chr(0b110010) + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(612 - 564) + '\157' + '\x33' + chr(0b1 + 0o57) + chr(0b100011 + 0o23), ord("\x08")), nzTpIcepk0o8(chr(1439 - 1391) + '\157' + chr(49) + chr(49) + chr(1090 - 1040), ord("\x08")), nzTpIcepk0o8(chr(0b100100 + 0o14) + chr(0b1000011 + 0o54) + chr(313 - 263) + chr(0b1000 + 0o53), 8), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010) + '\x33' + chr(48), 55401 - 55393), nzTpIcepk0o8(chr(48) + '\157' + '\x32' + chr(0b110101) + chr(1244 - 1194), 46118 - 46110), nzTpIcepk0o8('\060' + chr(0b1100011 + 0o14) + '\063' + chr(2083 - 2032) + '\066', 0o10), nzTpIcepk0o8(chr(0b1011 + 0o45) + chr(2689 - 2578) + chr(0b110010) + chr(0b110110 + 0o0) + '\x36', 0o10), nzTpIcepk0o8('\x30' + chr(0b101000 + 0o107) + chr(0b10 + 0o57) + '\x30' + '\062', 0b1000), nzTpIcepk0o8(chr(835 - 787) + chr(0b1101111) + chr(0b0 + 0o63) + '\060', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(11500 - 11389) + chr(49) + chr(644 - 592) + chr(53), 22408 - 22400), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b11 + 0o60) + chr(0b110011) + chr(49), 60472 - 60464), nzTpIcepk0o8('\x30' + '\x6f' + '\x32' + chr(609 - 555) + '\066', 8)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1075 - 1027) + chr(6097 - 5986) + chr(2723 - 2670) + '\060', 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xa3'), chr(100) + '\x65' + chr(99) + '\157' + chr(0b1100100) + '\145')(chr(0b1100010 + 0o23) + chr(0b1110100) + '\x66' + chr(387 - 342) + chr(2204 - 2148)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def YedXRIvKhivS(DCKHhI6xLX9g, Kdo_ylGtG7GR): DCKHhI6xLX9g[roI3spqORKae(ES5oEprVxulp(b'\xe5\x0c\xe9\x7f[U'), chr(0b1100100) + chr(101) + chr(0b1001100 + 0o27) + chr(0b1101111) + chr(100) + '\x65')(chr(117) + chr(7740 - 7624) + '\146' + chr(0b101101) + chr(366 - 310))] = Kdo_ylGtG7GR.Jo04eKGghh9i DCKHhI6xLX9g[roI3spqORKae(ES5oEprVxulp(b'\xec\x1c\xe5d\\F'), chr(100) + chr(101) + chr(99) + chr(111) + chr(0b1100100) + chr(0b1100 + 0o131))(chr(0b111001 + 0o74) + chr(11626 - 11510) + chr(102) + '\055' + chr(119 - 63))] = Kdo_ylGtG7GR.u2TBKXo7sv5e DCKHhI6xLX9g[roI3spqORKae(ES5oEprVxulp(b'\xe8\x04\xf0e_'), '\144' + chr(0b1100101) + '\143' + chr(0b1101111) + chr(0b1101 + 0o127) + '\x65')(chr(12958 - 12841) + chr(0b1110100) + chr(7325 - 7223) + chr(0b101101) + chr(3080 - 3024))] = Kdo_ylGtG7GR.BhwKvDaXtiJh DCKHhI6xLX9g[roI3spqORKae(ES5oEprVxulp(b'\xec\x1c\xe5d\\F\x17\xad\xab\xbcK'), '\x64' + chr(101) + '\143' + chr(111) + chr(0b1100100) + chr(101))(chr(0b1110101) + chr(116) + '\x66' + chr(0b111 + 0o46) + chr(0b100111 + 0o21))] = Kdo_ylGtG7GR.authored_on.cYrAaJZZtldc(roI3spqORKae(ES5oEprVxulp(b'\xad'), '\144' + '\x65' + chr(0b1010100 + 0o17) + '\157' + chr(0b101101 + 0o67) + chr(101))('\x75' + chr(0b1110100) + '\x66' + chr(0b11111 + 0o16) + '\x38'))
opencobra/memote
memote/suite/results/repo_result_manager.py
RepoResultManager.store
def store(self, result, commit=None, **kwargs): """ Store a result in a JSON file attaching git meta information. Parameters ---------- result : memote.MemoteResult The dictionary structure of results. commit : str, optional Unique hexsha of the desired commit. kwargs : Passed to parent function. """ git_info = self.record_git_info(commit) self.add_git(result.meta, git_info) filename = self.get_filename(git_info) super(RepoResultManager, self).store( result, filename=filename, **kwargs)
python
def store(self, result, commit=None, **kwargs): """ Store a result in a JSON file attaching git meta information. Parameters ---------- result : memote.MemoteResult The dictionary structure of results. commit : str, optional Unique hexsha of the desired commit. kwargs : Passed to parent function. """ git_info = self.record_git_info(commit) self.add_git(result.meta, git_info) filename = self.get_filename(git_info) super(RepoResultManager, self).store( result, filename=filename, **kwargs)
[ "def", "store", "(", "self", ",", "result", ",", "commit", "=", "None", ",", "*", "*", "kwargs", ")", ":", "git_info", "=", "self", ".", "record_git_info", "(", "commit", ")", "self", ".", "add_git", "(", "result", ".", "meta", ",", "git_info", ")", "filename", "=", "self", ".", "get_filename", "(", "git_info", ")", "super", "(", "RepoResultManager", ",", "self", ")", ".", "store", "(", "result", ",", "filename", "=", "filename", ",", "*", "*", "kwargs", ")" ]
Store a result in a JSON file attaching git meta information. Parameters ---------- result : memote.MemoteResult The dictionary structure of results. commit : str, optional Unique hexsha of the desired commit. kwargs : Passed to parent function.
[ "Store", "a", "result", "in", "a", "JSON", "file", "attaching", "git", "meta", "information", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/results/repo_result_manager.py#L113-L131
train
Store a result in a JSON file attaching git meta information.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b10000 + 0o40) + '\157' + '\x31' + '\x32' + '\x32', 0o10), nzTpIcepk0o8(chr(0b11111 + 0o21) + chr(0b1101111) + chr(1302 - 1252) + chr(492 - 439) + chr(0b10000 + 0o44), 0b1000), nzTpIcepk0o8(chr(1579 - 1531) + '\x6f' + '\064' + chr(54), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(1514 - 1464) + '\x33', 0b1000), nzTpIcepk0o8('\060' + '\157' + '\x37' + chr(50), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + '\062' + chr(50) + chr(48), 16122 - 16114), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(0b1111 + 0o140) + chr(2450 - 2399) + chr(0b110001) + '\060', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(161 - 111) + '\061' + chr(2392 - 2340), 0b1000), nzTpIcepk0o8('\060' + chr(0b111 + 0o150) + chr(1977 - 1927) + chr(54) + chr(0b1 + 0o64), 31744 - 31736), nzTpIcepk0o8(chr(347 - 299) + chr(0b1101111) + chr(51 - 1) + chr(0b110111) + '\063', ord("\x08")), nzTpIcepk0o8(chr(1014 - 966) + chr(111) + '\x34' + '\067', 0b1000), nzTpIcepk0o8(chr(0b111 + 0o51) + '\157' + '\062' + chr(49) + '\067', 0b1000), nzTpIcepk0o8(chr(2284 - 2236) + chr(0b1101111) + chr(0b110001) + '\067' + chr(1700 - 1646), 32185 - 32177), nzTpIcepk0o8('\x30' + chr(4174 - 4063) + chr(50) + chr(0b110100), 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\x32' + '\x33' + chr(51), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110001) + chr(503 - 449) + chr(2816 - 2761), ord("\x08")), nzTpIcepk0o8(chr(2177 - 2129) + '\x6f' + chr(49) + chr(0b110010) + '\x30', 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\061' + '\064' + chr(0b110100), 0o10), nzTpIcepk0o8(chr(377 - 329) + chr(111) + '\062' + chr(53) + chr(0b11010 + 0o30), 5606 - 5598), nzTpIcepk0o8(chr(297 - 249) + chr(111) + chr(0b110010) + chr(50) + chr(1639 - 1586), 53504 - 53496), nzTpIcepk0o8('\060' + chr(0b1011110 + 0o21) + chr(50) + '\064' + chr(0b110010), 0o10), nzTpIcepk0o8('\x30' + chr(3851 - 3740) + chr(0b110001 + 0o0), 0b1000), nzTpIcepk0o8(chr(1499 - 1451) + chr(0b1101111) + chr(0b11011 + 0o26) + chr(0b110001 + 0o6) + chr(48), 0o10), nzTpIcepk0o8(chr(0b10000 + 0o40) + chr(0b1001101 + 0o42) + chr(53) + '\062', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1011 + 0o144) + '\063' + '\x31' + chr(0b100100 + 0o16), 2203 - 2195), nzTpIcepk0o8(chr(48) + '\157' + chr(1781 - 1731) + chr(947 - 895) + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(111) + chr(2394 - 2344) + '\x36' + '\064', 0b1000), nzTpIcepk0o8('\x30' + chr(111) + '\x31' + '\063', 53576 - 53568), nzTpIcepk0o8(chr(48) + chr(1466 - 1355) + chr(196 - 147) + chr(55) + chr(51), 49375 - 49367), nzTpIcepk0o8('\060' + chr(0b100001 + 0o116) + chr(899 - 850) + '\064' + chr(2308 - 2256), 8), nzTpIcepk0o8(chr(48) + '\157' + chr(49) + '\x37' + '\x35', 0b1000), nzTpIcepk0o8(chr(0b10000 + 0o40) + chr(0b1100011 + 0o14) + '\062' + chr(2001 - 1946), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\063' + chr(53) + '\x34', ord("\x08")), nzTpIcepk0o8(chr(2090 - 2042) + chr(111) + chr(0b110011) + '\065' + chr(0b100 + 0o60), 8), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b11111 + 0o23) + chr(2180 - 2129) + '\x36', 8349 - 8341), nzTpIcepk0o8(chr(0b100 + 0o54) + chr(0b1101111) + '\x31' + chr(48) + chr(2326 - 2271), 50238 - 50230), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110101) + '\062', 8), nzTpIcepk0o8('\x30' + chr(0b101111 + 0o100) + chr(0b110100) + chr(55), 8), nzTpIcepk0o8(chr(0b110000) + chr(3410 - 3299) + chr(49) + chr(1540 - 1491) + chr(382 - 332), 16218 - 16210), nzTpIcepk0o8(chr(48) + chr(0b1100100 + 0o13) + chr(51) + chr(1249 - 1200) + '\x31', ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + '\x6f' + '\065' + '\x30', 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'|'), '\144' + chr(101) + chr(7057 - 6958) + '\157' + chr(0b1100100) + chr(0b1100101))(chr(0b1110101) + chr(116) + chr(2821 - 2719) + '\x2d' + chr(0b10001 + 0o47)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Yws2kZcdmcdB(hXMPsSrOQzbh, POx95m7SPOVy, An6zT8UjKIsO=None, **q5n0sHDDTy90): Kdo_ylGtG7GR = hXMPsSrOQzbh.record_git_info(An6zT8UjKIsO) roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'3\xc8BL]\xf9\xbc'), chr(0b1100100) + chr(0b11001 + 0o114) + chr(0b100101 + 0o76) + chr(0b1101111) + chr(0b1100100) + '\x65')('\165' + chr(0b111101 + 0o67) + chr(0b1100110) + chr(1548 - 1503) + '\x38'))(roI3spqORKae(POx95m7SPOVy, roI3spqORKae(ES5oEprVxulp(b'\x16\xefm[R\xd9\xfe\xf4\xf9\xe3\x1e\xe8'), chr(100) + chr(101) + chr(0b1100 + 0o127) + chr(111) + '\144' + chr(0b10101 + 0o120))('\165' + '\x74' + chr(102) + chr(498 - 453) + chr(0b111000))), Kdo_ylGtG7GR) FxZHtXEolYsL = hXMPsSrOQzbh.get_filename(Kdo_ylGtG7GR) roI3spqORKae(CO2YiXoIEhJY(WOV5KMB857JH, hXMPsSrOQzbh), roI3spqORKae(ES5oEprVxulp(b'\x0b\xdbU!Q\xca\xab\xe8\xd8\xd8C\xcd'), chr(0b1100100) + chr(0b110011 + 0o62) + chr(99) + '\157' + chr(100) + chr(2866 - 2765))(chr(8012 - 7895) + chr(0b10110 + 0o136) + chr(0b1100110) + chr(1917 - 1872) + chr(0b110000 + 0o10)))(POx95m7SPOVy, filename=FxZHtXEolYsL, **q5n0sHDDTy90)
opencobra/memote
memote/suite/results/repo_result_manager.py
RepoResultManager.load
def load(self, commit=None): """Load a result from the storage directory.""" git_info = self.record_git_info(commit) LOGGER.debug("Loading the result for commit '%s'.", git_info.hexsha) filename = self.get_filename(git_info) LOGGER.debug("Loading the result '%s'.", filename) result = super(RepoResultManager, self).load(filename) self.add_git(result.meta, git_info) return result
python
def load(self, commit=None): """Load a result from the storage directory.""" git_info = self.record_git_info(commit) LOGGER.debug("Loading the result for commit '%s'.", git_info.hexsha) filename = self.get_filename(git_info) LOGGER.debug("Loading the result '%s'.", filename) result = super(RepoResultManager, self).load(filename) self.add_git(result.meta, git_info) return result
[ "def", "load", "(", "self", ",", "commit", "=", "None", ")", ":", "git_info", "=", "self", ".", "record_git_info", "(", "commit", ")", "LOGGER", ".", "debug", "(", "\"Loading the result for commit '%s'.\"", ",", "git_info", ".", "hexsha", ")", "filename", "=", "self", ".", "get_filename", "(", "git_info", ")", "LOGGER", ".", "debug", "(", "\"Loading the result '%s'.\"", ",", "filename", ")", "result", "=", "super", "(", "RepoResultManager", ",", "self", ")", ".", "load", "(", "filename", ")", "self", ".", "add_git", "(", "result", ".", "meta", ",", "git_info", ")", "return", "result" ]
Load a result from the storage directory.
[ "Load", "a", "result", "from", "the", "storage", "directory", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/results/repo_result_manager.py#L133-L141
train
Load a result from the storage directory.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(111) + '\x33' + '\063' + '\063', 54873 - 54865), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(941 - 892) + chr(0b110100), 0o10), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b1 + 0o62) + chr(0b100001 + 0o17) + chr(0b110110), 0b1000), nzTpIcepk0o8(chr(113 - 65) + chr(0b1101111) + '\062' + chr(0b101010 + 0o6) + '\061', ord("\x08")), nzTpIcepk0o8(chr(0b1011 + 0o45) + chr(0b1101111) + chr(0b110001) + '\064' + chr(54), 25615 - 25607), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(51) + '\x31' + chr(49), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(2203 - 2154), 0b1000), nzTpIcepk0o8(chr(971 - 923) + chr(0b101000 + 0o107) + chr(0b110010) + chr(0b110110) + '\x32', 35420 - 35412), nzTpIcepk0o8(chr(48) + chr(0b1101001 + 0o6) + '\063' + '\064' + chr(1390 - 1339), 0b1000), nzTpIcepk0o8('\060' + '\157' + '\x31' + chr(0b110100 + 0o3) + chr(0b110110), 51332 - 51324), nzTpIcepk0o8(chr(0b10101 + 0o33) + chr(0b1101111) + chr(0b100000 + 0o23) + chr(48) + chr(1424 - 1370), 8), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b10011 + 0o44) + '\x34', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\x32' + chr(0b110010), 51560 - 51552), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110 + 0o55) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(111) + chr(0b110001) + '\065' + chr(55), 0o10), nzTpIcepk0o8(chr(1225 - 1177) + chr(0b1101111) + chr(49) + chr(0b110 + 0o57), 3035 - 3027), nzTpIcepk0o8(chr(1166 - 1118) + chr(2524 - 2413) + chr(49) + '\062' + chr(55), 0b1000), nzTpIcepk0o8(chr(2049 - 2001) + '\157' + chr(0b10010 + 0o41) + chr(1978 - 1924) + '\x35', 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\066' + chr(52), 56630 - 56622), nzTpIcepk0o8(chr(48) + '\x6f' + '\x31' + chr(0b100110 + 0o12) + '\x30', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b110010 + 0o75) + chr(0b110010) + chr(55) + chr(1201 - 1147), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(53) + '\060', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b11011 + 0o124) + '\x31' + '\x37' + '\x35', 0o10), nzTpIcepk0o8(chr(0b101 + 0o53) + chr(0b1100101 + 0o12) + chr(49) + chr(0b100101 + 0o16) + chr(49), 0o10), nzTpIcepk0o8(chr(0b11111 + 0o21) + '\x6f' + chr(51) + chr(0b101011 + 0o5) + '\x36', 8), nzTpIcepk0o8(chr(48) + '\x6f' + chr(2312 - 2262) + '\060', 0o10), nzTpIcepk0o8('\060' + chr(2957 - 2846) + chr(49) + '\x30', 0b1000), nzTpIcepk0o8(chr(2017 - 1969) + chr(4510 - 4399) + '\062' + chr(0b110011) + chr(2249 - 2199), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(6246 - 6135) + chr(0b11010 + 0o30) + '\062' + chr(0b110000), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1011011 + 0o24) + chr(50) + chr(0b110001) + chr(49), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\062' + '\061' + chr(55), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b111101 + 0o62) + '\x32' + '\067' + '\x35', 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(50) + '\x33' + chr(0b110010), 8), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110001) + chr(1315 - 1261) + '\062', 26881 - 26873), nzTpIcepk0o8(chr(48) + chr(6569 - 6458) + '\x32' + chr(0b110000) + chr(103 - 48), ord("\x08")), nzTpIcepk0o8(chr(795 - 747) + chr(111) + '\x34' + chr(0b110001), 0o10), nzTpIcepk0o8('\060' + chr(3636 - 3525) + chr(0b110010) + '\x37', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\062' + chr(55) + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(1446 - 1398) + chr(0b1101011 + 0o4) + chr(0b100110 + 0o14) + chr(54) + '\060', 0o10), nzTpIcepk0o8(chr(1616 - 1568) + chr(0b1101111) + chr(0b110000 + 0o3) + chr(54) + chr(50), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1631 - 1583) + chr(0b11110 + 0o121) + chr(1323 - 1270) + chr(509 - 461), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xf5'), chr(100) + chr(0b110000 + 0o65) + '\143' + '\157' + chr(0b1100100) + chr(0b1100101))(chr(9336 - 9219) + chr(5353 - 5237) + chr(4691 - 4589) + chr(1977 - 1932) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def ZERsdc7c1d8E(hXMPsSrOQzbh, An6zT8UjKIsO=None): Kdo_ylGtG7GR = hXMPsSrOQzbh.record_git_info(An6zT8UjKIsO) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xbcM\xff\xdb_\xadn\x84\xb6\x13\x83f'), chr(6431 - 6331) + chr(101) + chr(9028 - 8929) + '\157' + chr(6138 - 6038) + chr(101))(chr(3553 - 3436) + chr(0b1110100) + chr(0b110101 + 0o61) + chr(489 - 444) + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'\x97c\xa7\xe5\x0f\xa7f\x92\x97\x16\xa3\x1c`\x7f\x1cx;\x81\x14&\xd1Z]:\xa9}e\xf3\xe4\xa9\xa8\x98\xe9U\xa9'), '\x64' + chr(0b11111 + 0o106) + chr(0b1100011) + chr(111) + chr(100) + chr(0b11101 + 0o110))(chr(13375 - 13258) + chr(0b1101000 + 0o14) + '\146' + '\055' + chr(2805 - 2749)), roI3spqORKae(Kdo_ylGtG7GR, roI3spqORKae(ES5oEprVxulp(b'\x91c\xf6\xb5\x03\x82F\xd5\x8b\x16\xffU'), '\144' + chr(0b1100101) + chr(3746 - 3647) + chr(5389 - 5278) + '\144' + chr(101))(chr(0b11100 + 0o131) + chr(1315 - 1199) + '\x66' + chr(0b1101 + 0o40) + '\x38'))) FxZHtXEolYsL = hXMPsSrOQzbh.get_filename(Kdo_ylGtG7GR) roI3spqORKae(y4NfcQ4NljMN, roI3spqORKae(ES5oEprVxulp(b'\xbcM\xff\xdb_\xadn\x84\xb6\x13\x83f'), '\x64' + '\145' + '\x63' + chr(293 - 182) + '\144' + chr(0b1001111 + 0o26))('\x75' + chr(6006 - 5890) + chr(0b1010000 + 0o26) + chr(1355 - 1310) + chr(1445 - 1389)))(roI3spqORKae(ES5oEprVxulp(b'\x97c\xa7\xe5\x0f\xa7f\x92\x97\x16\xa3\x1c`\x7f\x1cx;\x81\x14g\x9b[Zw'), chr(0b111011 + 0o51) + chr(0b1001000 + 0o35) + chr(99) + chr(0b1111 + 0o140) + '\144' + '\x65')(chr(117) + chr(116) + '\146' + chr(293 - 248) + chr(0b111000)), FxZHtXEolYsL) POx95m7SPOVy = CO2YiXoIEhJY(WOV5KMB857JH, hXMPsSrOQzbh).ZERsdc7c1d8E(FxZHtXEolYsL) roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\xbah\xa2\xde\x01\xa0u'), chr(0b1100100) + chr(937 - 836) + chr(0b1100011) + chr(0b1010111 + 0o30) + chr(0b1100100) + chr(0b1110 + 0o127))(chr(117) + chr(0b1110100) + chr(0b101000 + 0o76) + '\055' + chr(1193 - 1137)))(roI3spqORKae(POx95m7SPOVy, roI3spqORKae(ES5oEprVxulp(b'\x9fO\x8d\xc9\x0e\x807\xca\xaf&\xff['), '\x64' + chr(101) + chr(0b1100011) + chr(111) + '\x64' + chr(3015 - 2914))('\x75' + '\164' + '\x66' + '\x2d' + chr(0b111000))), Kdo_ylGtG7GR) return POx95m7SPOVy
opencobra/memote
memote/jinja2_extension.py
MemoteExtension.normalize
def normalize(filename): """Return an absolute path of the given file name.""" # Default value means we do not resolve a model file. if filename == "default": return filename filename = expanduser(filename) if isabs(filename): return filename else: return join(os.getcwd(), filename)
python
def normalize(filename): """Return an absolute path of the given file name.""" # Default value means we do not resolve a model file. if filename == "default": return filename filename = expanduser(filename) if isabs(filename): return filename else: return join(os.getcwd(), filename)
[ "def", "normalize", "(", "filename", ")", ":", "# Default value means we do not resolve a model file.", "if", "filename", "==", "\"default\"", ":", "return", "filename", "filename", "=", "expanduser", "(", "filename", ")", "if", "isabs", "(", "filename", ")", ":", "return", "filename", "else", ":", "return", "join", "(", "os", ".", "getcwd", "(", ")", ",", "filename", ")" ]
Return an absolute path of the given file name.
[ "Return", "an", "absolute", "path", "of", "the", "given", "file", "name", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/jinja2_extension.py#L42-L51
train
Return an absolute path of the given file name.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(686 - 638) + chr(0b1011111 + 0o20) + '\x33' + chr(52) + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(584 - 536) + chr(0b1101111) + chr(50) + '\x36' + chr(0b1111 + 0o43), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(326 - 277) + chr(0b110010) + '\066', 0o10), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(1238 - 1127) + chr(0b1 + 0o62) + '\062' + chr(1805 - 1753), 0o10), nzTpIcepk0o8('\060' + chr(8826 - 8715) + chr(52), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(55) + chr(950 - 895), 25341 - 25333), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x33' + chr(55) + chr(53), 0b1000), nzTpIcepk0o8('\x30' + chr(1292 - 1181) + chr(0b110011) + '\061' + '\x37', 0o10), nzTpIcepk0o8('\x30' + chr(0b100010 + 0o115) + chr(0b110010) + chr(0b110100) + '\066', 33483 - 33475), nzTpIcepk0o8('\060' + chr(3895 - 3784) + '\x32', 15013 - 15005), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110101 + 0o1) + chr(51), 28542 - 28534), nzTpIcepk0o8('\x30' + chr(0b1000001 + 0o56) + '\061' + '\x36' + '\065', 8666 - 8658), nzTpIcepk0o8(chr(1129 - 1081) + chr(0b1001100 + 0o43) + '\062' + chr(54) + chr(0b1001 + 0o55), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(2249 - 2198) + chr(0b1 + 0o63) + chr(0b1111 + 0o42), ord("\x08")), nzTpIcepk0o8(chr(1872 - 1824) + chr(111) + chr(0b110010) + chr(0b110001) + chr(0b11 + 0o55), ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + '\065' + chr(48), 8205 - 8197), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110011 + 0o0) + chr(1552 - 1499) + chr(49), ord("\x08")), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(6678 - 6567) + '\063' + '\065' + '\x36', 0o10), nzTpIcepk0o8('\x30' + chr(10107 - 9996) + chr(0b110010) + chr(0b110000) + chr(49), 0o10), nzTpIcepk0o8('\060' + chr(10966 - 10855) + '\x33' + chr(0b110011) + chr(0b110001), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(1221 - 1172) + chr(0b101 + 0o53) + '\061', 28092 - 28084), nzTpIcepk0o8('\x30' + '\157' + chr(55) + chr(0b110010), 0b1000), nzTpIcepk0o8(chr(2180 - 2132) + chr(0b1101111) + chr(1494 - 1444) + '\067' + chr(49), 9577 - 9569), nzTpIcepk0o8(chr(48) + '\157' + chr(2242 - 2187) + chr(50), 8), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110111) + chr(862 - 812), 8), nzTpIcepk0o8(chr(0b11010 + 0o26) + '\x6f' + '\061' + chr(0b110111) + chr(50), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(49) + chr(51), 50256 - 50248), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\062' + chr(48) + chr(53), ord("\x08")), nzTpIcepk0o8('\060' + chr(1163 - 1052) + '\063' + '\061' + chr(688 - 638), ord("\x08")), nzTpIcepk0o8(chr(0b100001 + 0o17) + '\x6f' + '\063' + chr(54) + '\066', 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\x32' + '\x32' + '\067', 0o10), nzTpIcepk0o8('\060' + chr(6904 - 6793) + chr(0b100000 + 0o21) + chr(136 - 82) + chr(0b101110 + 0o5), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1000111 + 0o50) + chr(50) + chr(92 - 39) + chr(51), 6027 - 6019), nzTpIcepk0o8(chr(0b110000) + chr(4414 - 4303) + chr(51) + '\067' + chr(50), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b101001 + 0o10) + chr(986 - 932) + '\x30', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110001) + '\061' + chr(0b11111 + 0o27), 0b1000), nzTpIcepk0o8(chr(2076 - 2028) + '\157' + chr(52) + '\x30', 205 - 197), nzTpIcepk0o8('\060' + '\157' + '\x31', 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110001) + chr(280 - 231) + chr(48), 0b1000), nzTpIcepk0o8('\060' + chr(2681 - 2570) + chr(0b110010) + chr(0b101001 + 0o14) + chr(0b110001 + 0o3), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x35' + '\x30', 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xca'), '\x64' + '\x65' + '\143' + chr(0b1101111) + '\144' + chr(0b1001110 + 0o27))('\x75' + chr(9302 - 9186) + '\x66' + chr(0b101101) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def euRgWTY4eBYM(FxZHtXEolYsL): if FxZHtXEolYsL == roI3spqORKae(ES5oEprVxulp(b'\x80\xd70\xb5qS\x89'), chr(0b1100100) + '\x65' + '\x63' + chr(0b1101111) + chr(0b1100100) + '\x65')(chr(0b1110101) + '\x74' + chr(0b1100110) + chr(45) + chr(0b111000)): return FxZHtXEolYsL FxZHtXEolYsL = N4eRK6wyKOpx(FxZHtXEolYsL) if BV5SMwMV7CaF(FxZHtXEolYsL): return FxZHtXEolYsL else: return Y4yM9BcfTCNq(roI3spqORKae(aHUqKstZLeS6, roI3spqORKae(ES5oEprVxulp(b'\x83\xd7"\xb7s['), '\x64' + chr(101) + chr(0b101110 + 0o65) + chr(0b1101111) + '\x64' + '\145')(chr(0b1110101) + '\x74' + '\x66' + '\055' + chr(56)))(), FxZHtXEolYsL)
opencobra/memote
memote/experimental/growth.py
GrowthExperiment.load
def load(self, dtype_conversion=None): """ Load the data table and corresponding validation schema. Parameters ---------- dtype_conversion : dict Column names as keys and corresponding type for loading the data. Please take a look at the `pandas documentation <https://pandas.pydata.org/pandas-docs/stable/io.html#specifying-column-data-types>`__ for detailed explanations. """ if dtype_conversion is None: dtype_conversion = {"growth": str} super(GrowthExperiment, self).load(dtype_conversion=dtype_conversion) self.data["growth"] = self.data["growth"].isin(self.TRUTHY)
python
def load(self, dtype_conversion=None): """ Load the data table and corresponding validation schema. Parameters ---------- dtype_conversion : dict Column names as keys and corresponding type for loading the data. Please take a look at the `pandas documentation <https://pandas.pydata.org/pandas-docs/stable/io.html#specifying-column-data-types>`__ for detailed explanations. """ if dtype_conversion is None: dtype_conversion = {"growth": str} super(GrowthExperiment, self).load(dtype_conversion=dtype_conversion) self.data["growth"] = self.data["growth"].isin(self.TRUTHY)
[ "def", "load", "(", "self", ",", "dtype_conversion", "=", "None", ")", ":", "if", "dtype_conversion", "is", "None", ":", "dtype_conversion", "=", "{", "\"growth\"", ":", "str", "}", "super", "(", "GrowthExperiment", ",", "self", ")", ".", "load", "(", "dtype_conversion", "=", "dtype_conversion", ")", "self", ".", "data", "[", "\"growth\"", "]", "=", "self", ".", "data", "[", "\"growth\"", "]", ".", "isin", "(", "self", ".", "TRUTHY", ")" ]
Load the data table and corresponding validation schema. Parameters ---------- dtype_conversion : dict Column names as keys and corresponding type for loading the data. Please take a look at the `pandas documentation <https://pandas.pydata.org/pandas-docs/stable/io.html#specifying-column-data-types>`__ for detailed explanations.
[ "Load", "the", "data", "table", "and", "corresponding", "validation", "schema", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/growth.py#L49-L65
train
Load the data table and corresponding validation schema.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b11100 + 0o24) + '\x6f' + chr(0b110101) + '\061', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(1372 - 1319) + chr(0b1 + 0o62), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(2115 - 2004) + chr(0b101 + 0o56) + '\x32' + chr(0b101101 + 0o11), ord("\x08")), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b1101111) + chr(0b101001 + 0o11) + '\061' + chr(51), 0o10), nzTpIcepk0o8('\060' + '\157' + chr(1125 - 1074) + chr(50) + '\x34', 0b1000), nzTpIcepk0o8('\060' + chr(0b1011011 + 0o24) + chr(1686 - 1635) + '\x37' + '\x31', 48749 - 48741), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(167 - 112) + chr(0b1111 + 0o47), 0b1000), nzTpIcepk0o8('\060' + chr(0b100000 + 0o117) + '\x34' + '\061', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b111 + 0o150) + '\x33' + chr(0b110011) + chr(997 - 944), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(51) + chr(2134 - 2079) + chr(0b10100 + 0o41), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(11292 - 11181) + chr(1826 - 1775) + chr(0b101100 + 0o11) + chr(0b110101), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(51) + '\060' + chr(335 - 285), 36259 - 36251), nzTpIcepk0o8(chr(1870 - 1822) + '\157' + chr(1021 - 972) + '\x36', 0o10), nzTpIcepk0o8(chr(0b11110 + 0o22) + '\x6f' + chr(51) + '\063' + chr(533 - 480), 8), nzTpIcepk0o8(chr(48) + chr(2709 - 2598) + chr(2540 - 2487) + '\065', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x32' + chr(0b110101) + chr(53), 44570 - 44562), nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(111) + chr(0b11000 + 0o37), 0b1000), nzTpIcepk0o8(chr(88 - 40) + chr(3786 - 3675) + '\x31' + '\066' + chr(2318 - 2269), 52219 - 52211), nzTpIcepk0o8(chr(48) + chr(111) + chr(2200 - 2152), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b10010 + 0o135) + '\x31' + '\066' + '\066', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1001111 + 0o40) + '\x33' + chr(241 - 192) + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\063' + chr(0b100011 + 0o17) + chr(322 - 269), 22414 - 22406), nzTpIcepk0o8(chr(48) + chr(111) + chr(51) + chr(2251 - 2202) + chr(2196 - 2144), 61982 - 61974), nzTpIcepk0o8(chr(0b11111 + 0o21) + chr(6912 - 6801) + chr(0b110001) + '\067' + '\x36', 0o10), nzTpIcepk0o8(chr(0b11010 + 0o26) + chr(0b100001 + 0o116) + chr(0b110100) + chr(50), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\060', 8), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(0b1001010 + 0o45) + chr(0b1110 + 0o45) + chr(50) + chr(0b110011), 57237 - 57229), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b1010 + 0o51) + chr(276 - 228) + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(111) + chr(51) + '\x31' + chr(51), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(8746 - 8635) + chr(0b110001) + chr(55), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x33', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + '\x31' + chr(1149 - 1097) + chr(1752 - 1701), 61370 - 61362), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010 + 0o0) + '\x31' + chr(0b100111 + 0o11), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(984 - 873) + chr(50) + chr(0b110101), 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\x31' + '\x32' + '\x37', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(9549 - 9438) + chr(0b11110 + 0o24) + chr(51) + chr(0b110011), 20555 - 20547), nzTpIcepk0o8(chr(2071 - 2023) + '\x6f' + chr(0b100110 + 0o14), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x31' + chr(0b110001) + '\x35', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1010001 + 0o36) + chr(50) + chr(747 - 696) + '\061', 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(0b1100 + 0o45) + chr(2072 - 2022), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + chr(2634 - 2523) + chr(2511 - 2458) + chr(2228 - 2180), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x07'), chr(0b1100100) + chr(0b1100101) + chr(99) + chr(0b1100100 + 0o13) + chr(0b1010110 + 0o16) + chr(0b1011011 + 0o12))(chr(9608 - 9491) + chr(3634 - 3518) + '\146' + chr(0b101101) + chr(279 - 223)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def ZERsdc7c1d8E(hXMPsSrOQzbh, IoJD1UcfkRii=None): if IoJD1UcfkRii is None: IoJD1UcfkRii = {roI3spqORKae(ES5oEprVxulp(b'NY\xb9\xfc\xa0\x91'), chr(100) + chr(0b1001111 + 0o26) + '\143' + chr(1312 - 1201) + chr(8170 - 8070) + chr(101))('\165' + chr(1619 - 1503) + chr(0b1001000 + 0o36) + chr(927 - 882) + chr(0b110000 + 0o10)): N9zlRy29S1SS} roI3spqORKae(CO2YiXoIEhJY(xCLuqFfcR6Js, hXMPsSrOQzbh), roI3spqORKae(ES5oEprVxulp(b'sn\x84\xf8\xb0\x9a\tB\xec\x99\xd5\x87'), '\144' + chr(0b1000110 + 0o37) + '\143' + chr(9588 - 9477) + chr(0b101101 + 0o67) + chr(0b1100101))(chr(117) + chr(116) + chr(4674 - 4572) + chr(0b101101) + '\070'))(dtype_conversion=IoJD1UcfkRii) hXMPsSrOQzbh.FfKOThdpoDTb[roI3spqORKae(ES5oEprVxulp(b'NY\xb9\xfc\xa0\x91'), chr(0b110000 + 0o64) + '\145' + chr(4012 - 3913) + '\x6f' + chr(0b1100100) + '\145')(chr(0b110101 + 0o100) + '\164' + chr(0b11101 + 0o111) + chr(0b101101) + '\x38')] = hXMPsSrOQzbh.data[roI3spqORKae(ES5oEprVxulp(b'NY\xb9\xfc\xa0\x91'), chr(2265 - 2165) + '\145' + chr(99) + chr(111) + chr(0b1001 + 0o133) + chr(0b1100101))(chr(10379 - 10262) + chr(0b110110 + 0o76) + chr(102) + '\x2d' + chr(0b10111 + 0o41))].isin(hXMPsSrOQzbh.TRUTHY)
opencobra/memote
memote/experimental/growth.py
GrowthExperiment.evaluate
def evaluate(self, model, threshold=0.1): """Evaluate in silico growth rates.""" with model: if self.medium is not None: self.medium.apply(model) if self.objective is not None: model.objective = self.objective model.add_cons_vars(self.constraints) threshold *= model.slim_optimize() growth = list() for row in self.data.itertuples(index=False): with model: exchange = model.reactions.get_by_id(row.exchange) if bool(exchange.reactants): exchange.lower_bound = -row.uptake else: exchange.upper_bound = row.uptake growth.append(model.slim_optimize() >= threshold) return DataFrame({ "exchange": self.data["exchange"], "growth": growth })
python
def evaluate(self, model, threshold=0.1): """Evaluate in silico growth rates.""" with model: if self.medium is not None: self.medium.apply(model) if self.objective is not None: model.objective = self.objective model.add_cons_vars(self.constraints) threshold *= model.slim_optimize() growth = list() for row in self.data.itertuples(index=False): with model: exchange = model.reactions.get_by_id(row.exchange) if bool(exchange.reactants): exchange.lower_bound = -row.uptake else: exchange.upper_bound = row.uptake growth.append(model.slim_optimize() >= threshold) return DataFrame({ "exchange": self.data["exchange"], "growth": growth })
[ "def", "evaluate", "(", "self", ",", "model", ",", "threshold", "=", "0.1", ")", ":", "with", "model", ":", "if", "self", ".", "medium", "is", "not", "None", ":", "self", ".", "medium", ".", "apply", "(", "model", ")", "if", "self", ".", "objective", "is", "not", "None", ":", "model", ".", "objective", "=", "self", ".", "objective", "model", ".", "add_cons_vars", "(", "self", ".", "constraints", ")", "threshold", "*=", "model", ".", "slim_optimize", "(", ")", "growth", "=", "list", "(", ")", "for", "row", "in", "self", ".", "data", ".", "itertuples", "(", "index", "=", "False", ")", ":", "with", "model", ":", "exchange", "=", "model", ".", "reactions", ".", "get_by_id", "(", "row", ".", "exchange", ")", "if", "bool", "(", "exchange", ".", "reactants", ")", ":", "exchange", ".", "lower_bound", "=", "-", "row", ".", "uptake", "else", ":", "exchange", ".", "upper_bound", "=", "row", ".", "uptake", "growth", ".", "append", "(", "model", ".", "slim_optimize", "(", ")", ">=", "threshold", ")", "return", "DataFrame", "(", "{", "\"exchange\"", ":", "self", ".", "data", "[", "\"exchange\"", "]", ",", "\"growth\"", ":", "growth", "}", ")" ]
Evaluate in silico growth rates.
[ "Evaluate", "in", "silico", "growth", "rates", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/experimental/growth.py#L67-L88
train
Evaluate in silico growth rates.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(2676 - 2565) + chr(49) + chr(0b10101 + 0o42) + '\066', 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b10110 + 0o35) + chr(172 - 117) + chr(0b10000 + 0o42), 0o10), nzTpIcepk0o8(chr(1064 - 1016) + '\x6f' + chr(671 - 620) + '\x32' + '\064', 30692 - 30684), nzTpIcepk0o8(chr(48) + chr(10830 - 10719) + chr(53) + chr(49), ord("\x08")), nzTpIcepk0o8('\x30' + chr(4807 - 4696) + chr(49) + '\x30' + '\066', 0o10), nzTpIcepk0o8(chr(376 - 328) + chr(9004 - 8893) + chr(359 - 309) + chr(55) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(7165 - 7054) + chr(639 - 588) + '\x30' + chr(0b110110), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(51) + chr(2391 - 2336), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b100110 + 0o111) + chr(0b110111) + '\x36', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x33', 0b1000), nzTpIcepk0o8(chr(0b11001 + 0o27) + '\157' + chr(0b110010) + chr(0b10 + 0o63) + '\064', ord("\x08")), nzTpIcepk0o8(chr(0b1100 + 0o44) + '\157' + chr(0b11001 + 0o30) + chr(1165 - 1115), 42423 - 42415), nzTpIcepk0o8(chr(0b101011 + 0o5) + '\157' + chr(51) + '\x35' + chr(0b110000), 28583 - 28575), nzTpIcepk0o8(chr(0b101110 + 0o2) + chr(0b1101111) + chr(0b110011) + chr(0b100101 + 0o15), 18376 - 18368), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b11110 + 0o24) + chr(432 - 381) + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110000 + 0o3) + '\066', 0b1000), nzTpIcepk0o8(chr(2158 - 2110) + chr(0b1011100 + 0o23) + chr(0b100111 + 0o14) + chr(2009 - 1961) + chr(0b100000 + 0o24), 701 - 693), nzTpIcepk0o8(chr(0b10 + 0o56) + '\157' + chr(49) + chr(0b101 + 0o57) + chr(1820 - 1770), 34639 - 34631), nzTpIcepk0o8('\060' + chr(111) + '\x35' + chr(0b110001), 8), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110101) + chr(49), 8), nzTpIcepk0o8('\x30' + '\x6f' + chr(982 - 932) + chr(2190 - 2142), 24417 - 24409), nzTpIcepk0o8(chr(2010 - 1962) + '\157' + chr(49) + '\x31' + chr(48), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + '\061' + '\065' + chr(0b101001 + 0o13), 35957 - 35949), nzTpIcepk0o8(chr(616 - 568) + chr(5189 - 5078) + '\x31' + chr(498 - 448) + chr(668 - 619), 61675 - 61667), nzTpIcepk0o8(chr(695 - 647) + chr(0b110100 + 0o73) + chr(0b110011) + chr(0b100110 + 0o17) + chr(1232 - 1182), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\065' + chr(52), ord("\x08")), nzTpIcepk0o8(chr(1531 - 1483) + '\x6f' + chr(0b110010) + chr(0b110001 + 0o5) + '\065', ord("\x08")), nzTpIcepk0o8(chr(0b1011 + 0o45) + '\x6f' + chr(53) + chr(0b1010 + 0o52), 8), nzTpIcepk0o8(chr(48) + chr(4549 - 4438) + '\x31' + chr(53) + chr(0b110100), 8), nzTpIcepk0o8('\060' + chr(111) + chr(50) + chr(48) + '\x33', 0b1000), nzTpIcepk0o8('\x30' + chr(5209 - 5098) + '\x33' + chr(879 - 830) + '\062', 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(2131 - 2079) + chr(667 - 619), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + '\063' + chr(0b101 + 0o62) + '\065', ord("\x08")), nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(111) + chr(0b1110 + 0o45) + chr(2059 - 2007) + '\x36', 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(2056 - 2002) + chr(0b110100), 2005 - 1997), nzTpIcepk0o8(chr(499 - 451) + '\x6f' + '\067' + '\067', 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(98 - 49) + chr(48) + '\062', 38718 - 38710), nzTpIcepk0o8('\x30' + chr(2554 - 2443) + chr(1575 - 1524) + chr(51) + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(51) + chr(2136 - 2084) + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(49) + chr(2451 - 2397) + '\065', 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b100100 + 0o14) + chr(6974 - 6863) + '\x35' + '\060', 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'P'), chr(0b1 + 0o143) + chr(101) + '\143' + '\x6f' + chr(8957 - 8857) + chr(0b1100101))(chr(0b1110101) + chr(8689 - 8573) + '\146' + chr(0b101101) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def SVKnebZUhpql(hXMPsSrOQzbh, KW0sEfjlgNpM, klmSpxrzsw3P=0.1): with KW0sEfjlgNpM: if roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b',\xb1\xa6k\x05\xef\xabz\x067\xefO'), chr(0b1100100) + chr(0b1100101) + '\143' + chr(0b1101111) + chr(100) + chr(0b100110 + 0o77))(chr(0b1110101) + chr(0b101111 + 0o105) + chr(0b110000 + 0o66) + chr(45) + '\070')) is not None: roI3spqORKae(hXMPsSrOQzbh.medium, roI3spqORKae(ES5oEprVxulp(b'\x1f\x8a\xa4E?'), chr(0b101110 + 0o66) + '\x65' + '\x63' + chr(0b1101111) + '\x64' + chr(9426 - 9325))(chr(0b1110101) + '\x74' + chr(0b1100110) + '\055' + chr(0b111000)))(KW0sEfjlgNpM) if roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\x17\x9b\x98\x1c<\xe9\x8f{Jg\xffE'), '\144' + chr(6432 - 6331) + chr(1338 - 1239) + chr(111) + chr(0b1100100) + '\145')('\165' + chr(0b1110100) + '\x66' + chr(45) + chr(56))) is not None: KW0sEfjlgNpM.iaL5zRIdtdSO = hXMPsSrOQzbh.iaL5zRIdtdSO roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\x1f\x9e\xb0v%\xd4\xa8lau\xcdx\x9b'), chr(566 - 466) + chr(0b11011 + 0o112) + '\143' + '\x6f' + '\144' + '\x65')(chr(13228 - 13111) + chr(0b1110100) + chr(0b1100110) + '\055' + chr(447 - 391)))(roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b')\x89\x86q\x13\xd4\xbcX{z\xff@'), chr(100) + chr(4243 - 4142) + chr(8384 - 8285) + '\x6f' + chr(0b1000110 + 0o36) + '\145')(chr(117) + chr(116) + chr(0b101111 + 0o67) + chr(1836 - 1791) + '\070'))) klmSpxrzsw3P *= KW0sEfjlgNpM.slim_optimize() KGEPbTPLNofI = H4NoA26ON7iG() for o6UWUO21mH25 in roI3spqORKae(hXMPsSrOQzbh.data, roI3spqORKae(ES5oEprVxulp(b'\x17\x8e\xb1[2\xce\xb6s[p'), '\144' + chr(622 - 521) + chr(99) + chr(8404 - 8293) + '\144' + '\x65')(chr(117) + chr(2581 - 2465) + chr(6963 - 6861) + chr(0b100101 + 0o10) + chr(0b111000)))(index=nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b100101 + 0o13), 0b1000)): with KW0sEfjlgNpM: bxTA8Iugm8rP = KW0sEfjlgNpM.reactions.nvqVfVCN0iQJ(o6UWUO21mH25.bxTA8Iugm8rP) if TVUhqOt5_BbS(roI3spqORKae(bxTA8Iugm8rP, roI3spqORKae(ES5oEprVxulp(b'\x0c\x9f\xb5J2\xda\xa8kM'), chr(8243 - 8143) + chr(0b1100101) + chr(0b1011 + 0o130) + chr(0b10111 + 0o130) + chr(0b101110 + 0o66) + chr(0b1100101))(chr(0b1110101 + 0o0) + '\x74' + chr(0b1100110) + chr(708 - 663) + chr(0b111000)))): bxTA8Iugm8rP.oZmGA2tDSegk = -o6UWUO21mH25.uptake else: bxTA8Iugm8rP.IJAWNEqnuoWd = o6UWUO21mH25.uptake roI3spqORKae(KGEPbTPLNofI, roI3spqORKae(ES5oEprVxulp(b'6\xae\x87\x1d>\xdc\x81pTl\xf9?'), chr(100) + '\x65' + '\x63' + chr(111) + chr(100) + chr(101))(chr(0b1110101) + chr(116) + '\x66' + chr(709 - 664) + chr(56)))(roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'\r\x96\xbdD\x19\xd4\xb6kWn\xc5p\x8d'), '\x64' + chr(0b110101 + 0o60) + chr(99) + '\x6f' + chr(0b1100100) + chr(0b1100101))(chr(0b1001011 + 0o52) + '\x74' + '\146' + chr(0b101101) + '\070'))() >= klmSpxrzsw3P) return sjZGDTWo_6_o({roI3spqORKae(ES5oEprVxulp(b"\x1b\x82\xb7A'\xd5\xa1z"), '\x64' + chr(0b1100101) + '\x63' + chr(0b1000100 + 0o53) + chr(0b1100100) + '\145')(chr(0b1110101) + '\x74' + chr(1694 - 1592) + chr(0b101101) + '\x38'): roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'8\x9c\x9ff\x12\xd3\xa2oQG\xf8h'), chr(0b1100100) + chr(0b1100101) + chr(0b1100011) + chr(0b1101111) + chr(8264 - 8164) + '\x65')('\x75' + '\164' + '\x66' + chr(45) + '\x38'))[roI3spqORKae(ES5oEprVxulp(b"\x1b\x82\xb7A'\xd5\xa1z"), '\x64' + '\x65' + '\x63' + '\x6f' + '\x64' + chr(0b1100101))('\x75' + chr(1727 - 1611) + '\x66' + chr(0b101 + 0o50) + chr(416 - 360))], roI3spqORKae(ES5oEprVxulp(b'\x19\x88\xbb^2\xd3'), chr(0b1100100) + chr(0b100 + 0o141) + chr(99) + '\157' + chr(0b1100100) + '\145')(chr(0b1011 + 0o152) + '\x74' + chr(102) + '\x2d' + chr(159 - 103)): KGEPbTPLNofI})
opencobra/memote
memote/suite/results/models.py
BJSON.process_bind_param
def process_bind_param(self, value, dialect): """Convert the value to a JSON encoded string before storing it.""" try: with BytesIO() as stream: with GzipFile(fileobj=stream, mode="wb") as file_handle: file_handle.write( jsonify(value, pretty=False).encode("utf-8") ) output = stream.getvalue() return output except TypeError as error: log_json_incompatible_types(value) raise_with_traceback(error)
python
def process_bind_param(self, value, dialect): """Convert the value to a JSON encoded string before storing it.""" try: with BytesIO() as stream: with GzipFile(fileobj=stream, mode="wb") as file_handle: file_handle.write( jsonify(value, pretty=False).encode("utf-8") ) output = stream.getvalue() return output except TypeError as error: log_json_incompatible_types(value) raise_with_traceback(error)
[ "def", "process_bind_param", "(", "self", ",", "value", ",", "dialect", ")", ":", "try", ":", "with", "BytesIO", "(", ")", "as", "stream", ":", "with", "GzipFile", "(", "fileobj", "=", "stream", ",", "mode", "=", "\"wb\"", ")", "as", "file_handle", ":", "file_handle", ".", "write", "(", "jsonify", "(", "value", ",", "pretty", "=", "False", ")", ".", "encode", "(", "\"utf-8\"", ")", ")", "output", "=", "stream", ".", "getvalue", "(", ")", "return", "output", "except", "TypeError", "as", "error", ":", "log_json_incompatible_types", "(", "value", ")", "raise_with_traceback", "(", "error", ")" ]
Convert the value to a JSON encoded string before storing it.
[ "Convert", "the", "value", "to", "a", "JSON", "encoded", "string", "before", "storing", "it", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/results/models.py#L70-L82
train
Convert the value to a JSON encoded string before storing it.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(11107 - 10996) + chr(54) + '\x37', 0b1000), nzTpIcepk0o8(chr(48) + chr(3718 - 3607) + '\062' + chr(0b110110) + '\063', 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\061' + '\064' + chr(0b110111), 0b1000), nzTpIcepk0o8('\x30' + chr(4104 - 3993) + chr(0b10001 + 0o41) + chr(50) + '\x31', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110001) + '\x37' + '\x33', 16290 - 16282), nzTpIcepk0o8('\x30' + '\157' + '\x32' + '\060' + '\065', 56300 - 56292), nzTpIcepk0o8(chr(48) + chr(6689 - 6578) + '\x31' + chr(0b1011 + 0o45) + '\065', 14128 - 14120), nzTpIcepk0o8(chr(0b1010 + 0o46) + chr(305 - 194) + chr(1129 - 1079) + '\062' + chr(0b11010 + 0o33), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b101101 + 0o4) + chr(0b101110 + 0o10), 0b1000), nzTpIcepk0o8(chr(0b10011 + 0o35) + '\157' + '\x32' + chr(55), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\063' + chr(0b110111) + chr(55), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(10606 - 10495) + chr(51), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + '\061' + chr(0b1111 + 0o44) + chr(0b110 + 0o57), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + '\x34' + chr(50), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x33' + chr(2700 - 2647) + '\067', 0o10), nzTpIcepk0o8(chr(547 - 499) + chr(0b1101111) + chr(0b0 + 0o61) + '\x31' + chr(54), 24227 - 24219), nzTpIcepk0o8('\060' + '\157' + '\x32' + chr(49), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110011) + chr(2261 - 2209) + chr(0b11001 + 0o34), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\065' + chr(55), 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(1333 - 1283) + '\063' + '\x32', 1279 - 1271), nzTpIcepk0o8(chr(728 - 680) + chr(111) + chr(80 - 29) + '\066' + '\063', 0o10), nzTpIcepk0o8(chr(48) + chr(7819 - 7708) + '\063' + chr(0b11101 + 0o30) + chr(2367 - 2314), 0o10), nzTpIcepk0o8('\x30' + chr(0b1011111 + 0o20) + '\x31' + chr(55) + '\066', 0b1000), nzTpIcepk0o8('\060' + chr(0b110101 + 0o72) + chr(0b10010 + 0o37) + chr(0b110100 + 0o2) + '\x33', 51425 - 51417), nzTpIcepk0o8(chr(772 - 724) + '\157' + chr(0b10 + 0o60) + chr(48) + chr(0b10001 + 0o41), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\062' + '\067' + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + '\x31' + chr(0b100110 + 0o13) + '\x37', ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(48), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(51) + chr(0b10001 + 0o44) + '\061', 0o10), nzTpIcepk0o8(chr(0b100100 + 0o14) + chr(0b1101111) + '\x33' + '\x30', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110010) + chr(0b1010 + 0o55) + '\x33', 0o10), nzTpIcepk0o8(chr(0b1 + 0o57) + '\x6f' + chr(0b10100 + 0o40), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x32', 21804 - 21796), nzTpIcepk0o8('\x30' + chr(9953 - 9842) + '\x33' + '\066' + chr(0b100 + 0o54), 0b1000), nzTpIcepk0o8(chr(0b101100 + 0o4) + chr(111) + chr(1922 - 1871) + chr(51) + chr(544 - 489), 31035 - 31027), nzTpIcepk0o8('\060' + '\x6f' + '\062' + '\x32' + chr(0b101000 + 0o12), 0o10), nzTpIcepk0o8(chr(0b101110 + 0o2) + chr(0b101011 + 0o104) + chr(284 - 235) + '\061' + chr(0b110011), 21421 - 21413), nzTpIcepk0o8(chr(48) + chr(0b1010001 + 0o36) + chr(1144 - 1094) + chr(53) + '\x32', 38415 - 38407), nzTpIcepk0o8(chr(48) + chr(111) + chr(337 - 286) + chr(51) + '\x35', 24395 - 24387), nzTpIcepk0o8(chr(0b11100 + 0o24) + chr(111) + chr(0b10110 + 0o35) + chr(1480 - 1430), 26193 - 26185)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b11010 + 0o26) + '\x6f' + chr(0b110101) + chr(0b110000), 46148 - 46140)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x19'), '\x64' + '\x65' + chr(0b1010001 + 0o22) + chr(0b1101010 + 0o5) + chr(100) + chr(101))('\x75' + chr(0b1110100) + '\x66' + chr(0b100111 + 0o6) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def DxKfVcoZcpm_(hXMPsSrOQzbh, uV9iBiw0y_Mp, EbkgDJg0P89w): try: with BVoKtXpmh0oX() as ztC3O2ZXmsJr: with Bhqti_T9hvR6(fileobj=ztC3O2ZXmsJr, mode=roI3spqORKae(ES5oEprVxulp(b'@\xd1'), '\x64' + '\x65' + chr(7604 - 7505) + chr(0b1101111) + chr(0b1100100) + chr(0b11000 + 0o115))(chr(0b11011 + 0o132) + chr(0b1110100) + '\146' + chr(0b101101) + '\070')) as rC115QJVCRma: roI3spqORKae(rC115QJVCRma, roI3spqORKae(ES5oEprVxulp(b'Z\xdfW\xf9\x13\xf53\xa4Bg\x8e1'), '\144' + '\145' + '\143' + chr(0b11100 + 0o123) + '\x64' + chr(0b1000110 + 0o37))(chr(117) + '\164' + chr(0b111110 + 0o50) + chr(45) + chr(0b110 + 0o62)))(roI3spqORKae(KX6AkKujYHMO(uV9iBiw0y_Mp, pretty=nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b10010 + 0o36), 8)), roI3spqORKae(ES5oEprVxulp(b'n\xc2.\xf0)\xc3#\xf0a#\xb7b'), '\x64' + chr(0b100000 + 0o105) + chr(99) + chr(2323 - 2212) + '\x64' + chr(101))('\x75' + chr(3306 - 3190) + '\x66' + chr(45) + chr(0b100101 + 0o23)))(roI3spqORKae(ES5oEprVxulp(b'B\xc7\x01\xbcC'), '\x64' + chr(0b11011 + 0o112) + chr(99) + chr(2726 - 2615) + chr(3981 - 3881) + chr(4070 - 3969))(chr(0b1110101) + chr(394 - 278) + chr(0b1100110) + chr(45) + '\x38'))) toKQXlEvBKaK = ztC3O2ZXmsJr.getvalue() return toKQXlEvBKaK except jZIjKu8IFANs as qi1wipPVvEKd: aIJeb4Um0VzR(uV9iBiw0y_Mp) OIDii7_nVdKe(qi1wipPVvEKd)
opencobra/memote
memote/suite/results/models.py
BJSON.process_result_value
def process_result_value(self, value, dialect): """Convert a JSON encoded string to a dictionary structure.""" if value is not None: with BytesIO(value) as stream: with GzipFile(fileobj=stream, mode="rb") as file_handle: value = json.loads(file_handle.read().decode("utf-8")) return value
python
def process_result_value(self, value, dialect): """Convert a JSON encoded string to a dictionary structure.""" if value is not None: with BytesIO(value) as stream: with GzipFile(fileobj=stream, mode="rb") as file_handle: value = json.loads(file_handle.read().decode("utf-8")) return value
[ "def", "process_result_value", "(", "self", ",", "value", ",", "dialect", ")", ":", "if", "value", "is", "not", "None", ":", "with", "BytesIO", "(", "value", ")", "as", "stream", ":", "with", "GzipFile", "(", "fileobj", "=", "stream", ",", "mode", "=", "\"rb\"", ")", "as", "file_handle", ":", "value", "=", "json", ".", "loads", "(", "file_handle", ".", "read", "(", ")", ".", "decode", "(", "\"utf-8\"", ")", ")", "return", "value" ]
Convert a JSON encoded string to a dictionary structure.
[ "Convert", "a", "JSON", "encoded", "string", "to", "a", "dictionary", "structure", "." ]
276630fcd4449fb7b914186edfd38c239e7052df
https://github.com/opencobra/memote/blob/276630fcd4449fb7b914186edfd38c239e7052df/memote/suite/results/models.py#L84-L90
train
Convert a JSON encoded string to a dictionary structure.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(0b1101111) + '\x37' + chr(0b11000 + 0o33), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x32' + chr(55) + '\065', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(49) + chr(54) + '\063', 65254 - 65246), nzTpIcepk0o8(chr(0b101000 + 0o10) + '\x6f' + chr(51) + '\065' + chr(458 - 410), 38541 - 38533), nzTpIcepk0o8(chr(248 - 200) + '\x6f' + chr(0b10101 + 0o41) + chr(1771 - 1720), 0b1000), nzTpIcepk0o8('\x30' + chr(8459 - 8348) + '\x32' + chr(49) + chr(50), 0o10), nzTpIcepk0o8('\060' + chr(0b10100 + 0o133) + '\063' + '\x32' + '\060', 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\061' + chr(0b110100) + chr(0b110011), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\063' + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(3387 - 3276) + '\062' + '\x30' + chr(0b11111 + 0o27), ord("\x08")), nzTpIcepk0o8(chr(2261 - 2213) + chr(0b11100 + 0o123) + chr(1187 - 1136) + '\x30' + chr(0b101000 + 0o11), 16097 - 16089), nzTpIcepk0o8('\060' + chr(0b1010010 + 0o35) + '\063' + '\x31' + chr(0b110101 + 0o1), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + '\x33' + chr(1792 - 1743) + chr(0b110011), 0o10), nzTpIcepk0o8('\x30' + chr(5080 - 4969) + '\062' + chr(1111 - 1062) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1100100 + 0o13) + '\x32' + '\x35' + '\x33', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b101001 + 0o10) + chr(48) + chr(417 - 365), 0b1000), nzTpIcepk0o8(chr(0b11110 + 0o22) + '\x6f' + '\x33' + chr(0b100011 + 0o15) + '\063', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b101010 + 0o10) + '\063' + chr(0b110101), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x31' + chr(48) + chr(662 - 611), 0b1000), nzTpIcepk0o8(chr(153 - 105) + chr(0b1101111) + '\x37' + '\061', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1000101 + 0o52) + '\061' + chr(0b110101) + chr(0b101010 + 0o10), 31379 - 31371), nzTpIcepk0o8(chr(2208 - 2160) + chr(111) + '\x32' + '\063' + '\x35', 8), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110010) + '\x34' + chr(0b101000 + 0o16), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b10111 + 0o130) + chr(0b110010) + '\x36' + '\x36', 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001) + chr(0b101001 + 0o11) + '\062', 0b1000), nzTpIcepk0o8(chr(1590 - 1542) + chr(0b101000 + 0o107) + '\061' + '\060' + chr(0b101010 + 0o7), 11115 - 11107), nzTpIcepk0o8(chr(0b101110 + 0o2) + '\x6f' + chr(51) + '\064' + chr(1830 - 1776), 10071 - 10063), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(3875 - 3764) + chr(0b100111 + 0o16) + chr(1250 - 1198), 0b1000), nzTpIcepk0o8(chr(0b100111 + 0o11) + '\x6f' + chr(1100 - 1050) + chr(1800 - 1751) + '\x34', 17925 - 17917), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110001 + 0o5) + chr(55), 51729 - 51721), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\062' + chr(0b1101 + 0o47) + chr(0b100110 + 0o12), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b100010 + 0o115) + '\063' + chr(51) + '\x31', 34165 - 34157), nzTpIcepk0o8(chr(48) + '\x6f' + '\x31' + chr(0b100111 + 0o20) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(0b11110 + 0o22) + chr(111) + '\x36' + chr(0b110010), 1599 - 1591), nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(0b1101111) + chr(923 - 874) + chr(48), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\063' + chr(48) + '\061', 8), nzTpIcepk0o8('\x30' + '\157' + chr(0b110111) + chr(1387 - 1338), 8), nzTpIcepk0o8(chr(1382 - 1334) + '\157' + '\062' + '\x37' + '\x31', 0o10), nzTpIcepk0o8(chr(0b1101 + 0o43) + '\x6f' + chr(0b110011) + '\066' + '\061', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110011) + '\x30' + '\063', 8)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + chr(0b11110 + 0o121) + chr(0b1000 + 0o55) + '\x30', ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x15'), chr(100) + '\145' + chr(0b1100 + 0o127) + '\157' + chr(0b1100100) + chr(101))('\x75' + chr(0b100010 + 0o122) + chr(6275 - 6173) + '\x2d' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def SxEB6unKTSwU(hXMPsSrOQzbh, uV9iBiw0y_Mp, EbkgDJg0P89w): if uV9iBiw0y_Mp is not None: with BVoKtXpmh0oX(uV9iBiw0y_Mp) as ztC3O2ZXmsJr: with Bhqti_T9hvR6(fileobj=ztC3O2ZXmsJr, mode=roI3spqORKae(ES5oEprVxulp(b'I\xdf'), '\144' + chr(0b10000 + 0o125) + '\x63' + chr(111) + chr(7881 - 7781) + chr(101))(chr(117) + chr(0b1110100) + chr(0b1100110) + '\x2d' + chr(56))) as rC115QJVCRma: uV9iBiw0y_Mp = LNUKEwZDIbyb.OiapAM4bM0Ea(rC115QJVCRma.read().lfbFsdWlT3MB(roI3spqORKae(ES5oEprVxulp(b'N\xc9\x15\xc5\x0b'), '\x64' + chr(8061 - 7960) + chr(914 - 815) + '\157' + chr(0b1001 + 0o133) + chr(9879 - 9778))(chr(0b1100101 + 0o20) + chr(0b1110100) + chr(8147 - 8045) + chr(705 - 660) + '\070'))) return uV9iBiw0y_Mp
pawamoy/django-zxcvbn-password
src/zxcvbn_password/widgets.py
PasswordStrengthInput.render
def render(self, name, value, attrs=None, **kwargs): """Widget render method.""" min_score = zxcvbn_min_score() message_title = _('Warning') message_body = _( 'This password would take ' '<em class="password_strength_time"></em> to crack.') strength_markup = """ <div class="progress-bloc" style="margin-top: 10px;"> <div class="progress" style="margin-bottom: 10px;"> <div class="progress-bar progress-bar-warning password_strength_bar" role="progressbar" aria-valuenow="0" aria-valuemin="{min_score}" aria-valuemax="4" style="width: 0%%"> </div> </div> <p class="text-muted password_strength_info hidden"> <span class="label label-danger"> {title} </span> <span style="margin-left:5px;"> {body} </span> </p> </div> """ strength_markup = strength_markup.format( title=message_title, body=message_body, min_score=min_score) try: self.attrs['class'] = '%s password_strength'.strip() % self.attrs['class'] # noqa except KeyError: self.attrs['class'] = 'password_strength' return mark_safe(super(PasswordStrengthInput, self).render( # nosec name, value, attrs) + strength_markup)
python
def render(self, name, value, attrs=None, **kwargs): """Widget render method.""" min_score = zxcvbn_min_score() message_title = _('Warning') message_body = _( 'This password would take ' '<em class="password_strength_time"></em> to crack.') strength_markup = """ <div class="progress-bloc" style="margin-top: 10px;"> <div class="progress" style="margin-bottom: 10px;"> <div class="progress-bar progress-bar-warning password_strength_bar" role="progressbar" aria-valuenow="0" aria-valuemin="{min_score}" aria-valuemax="4" style="width: 0%%"> </div> </div> <p class="text-muted password_strength_info hidden"> <span class="label label-danger"> {title} </span> <span style="margin-left:5px;"> {body} </span> </p> </div> """ strength_markup = strength_markup.format( title=message_title, body=message_body, min_score=min_score) try: self.attrs['class'] = '%s password_strength'.strip() % self.attrs['class'] # noqa except KeyError: self.attrs['class'] = 'password_strength' return mark_safe(super(PasswordStrengthInput, self).render( # nosec name, value, attrs) + strength_markup)
[ "def", "render", "(", "self", ",", "name", ",", "value", ",", "attrs", "=", "None", ",", "*", "*", "kwargs", ")", ":", "min_score", "=", "zxcvbn_min_score", "(", ")", "message_title", "=", "_", "(", "'Warning'", ")", "message_body", "=", "_", "(", "'This password would take '", "'<em class=\"password_strength_time\"></em> to crack.'", ")", "strength_markup", "=", "\"\"\"\n <div class=\"progress-bloc\" style=\"margin-top: 10px;\">\n <div class=\"progress\" style=\"margin-bottom: 10px;\">\n <div class=\"progress-bar\n progress-bar-warning\n password_strength_bar\"\n role=\"progressbar\"\n aria-valuenow=\"0\"\n aria-valuemin=\"{min_score}\"\n aria-valuemax=\"4\"\n style=\"width: 0%%\">\n </div>\n </div>\n <p class=\"text-muted password_strength_info hidden\">\n <span class=\"label label-danger\">\n {title}\n </span>\n <span style=\"margin-left:5px;\">\n {body}\n </span>\n </p>\n </div>\n \"\"\"", "strength_markup", "=", "strength_markup", ".", "format", "(", "title", "=", "message_title", ",", "body", "=", "message_body", ",", "min_score", "=", "min_score", ")", "try", ":", "self", ".", "attrs", "[", "'class'", "]", "=", "'%s password_strength'", ".", "strip", "(", ")", "%", "self", ".", "attrs", "[", "'class'", "]", "# noqa", "except", "KeyError", ":", "self", ".", "attrs", "[", "'class'", "]", "=", "'password_strength'", "return", "mark_safe", "(", "super", "(", "PasswordStrengthInput", ",", "self", ")", ".", "render", "(", "# nosec", "name", ",", "value", ",", "attrs", ")", "+", "strength_markup", ")" ]
Widget render method.
[ "Widget", "render", "method", "." ]
7c6d37099da0f130d6ab88a0f941b6de476a0f86
https://github.com/pawamoy/django-zxcvbn-password/blob/7c6d37099da0f130d6ab88a0f941b6de476a0f86/src/zxcvbn_password/widgets.py#L17-L60
train
Render a nosec password strength input.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(999 - 951) + chr(111) + chr(50) + chr(2156 - 2106) + chr(492 - 439), 0b1000), nzTpIcepk0o8('\060' + chr(0b100 + 0o153) + chr(0b110011) + chr(2603 - 2550) + '\066', ord("\x08")), nzTpIcepk0o8(chr(1441 - 1393) + '\157' + chr(0b10010 + 0o43) + chr(0b110101), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(49) + chr(0b110101) + chr(647 - 595), 26695 - 26687), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110010) + chr(0b100001 + 0o25) + '\063', ord("\x08")), nzTpIcepk0o8(chr(1646 - 1598) + chr(9493 - 9382) + '\x34' + '\061', 932 - 924), nzTpIcepk0o8(chr(1315 - 1267) + chr(0b1101111) + '\065' + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(127 - 79) + chr(0b101001 + 0o106) + '\063' + chr(0b110010) + '\066', ord("\x08")), nzTpIcepk0o8(chr(0b101100 + 0o4) + chr(111) + chr(2016 - 1967) + '\061' + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(1410 - 1362) + '\157' + '\064' + chr(2685 - 2630), 44033 - 44025), nzTpIcepk0o8(chr(659 - 611) + chr(0b1101111) + chr(0b110011) + chr(52) + chr(1225 - 1172), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(49) + '\x35' + chr(0b1100 + 0o52), 5164 - 5156), nzTpIcepk0o8(chr(48) + chr(111) + '\x31' + chr(0b110011) + '\x32', 4668 - 4660), nzTpIcepk0o8(chr(0b1110 + 0o42) + '\157' + chr(1618 - 1567) + '\x37' + '\x33', 13063 - 13055), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(52) + '\x37', 8), nzTpIcepk0o8(chr(0b101110 + 0o2) + chr(0b101010 + 0o105) + chr(49) + '\x31' + chr(0b110000), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\065' + chr(50), 0o10), nzTpIcepk0o8(chr(0b110000 + 0o0) + chr(5474 - 5363) + chr(0b10100 + 0o37) + chr(0b110011) + chr(0b110000), 51079 - 51071), nzTpIcepk0o8(chr(0b110000) + chr(0b1100001 + 0o16) + chr(0b101110 + 0o10) + chr(50), 0o10), nzTpIcepk0o8(chr(0b11011 + 0o25) + '\157' + chr(0b110010) + chr(171 - 119) + '\063', ord("\x08")), nzTpIcepk0o8(chr(1520 - 1472) + chr(111) + chr(0b110001) + chr(2740 - 2686) + '\066', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110011) + chr(378 - 324) + chr(0b1000 + 0o56), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1110 + 0o141) + '\x31' + '\066', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(6631 - 6520) + chr(0b110010) + '\060' + chr(0b10011 + 0o44), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x32' + chr(0b110100) + '\x30', 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b110001) + chr(0b100101 + 0o15) + chr(53), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(50) + chr(0b110111) + '\060', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b11100 + 0o123) + chr(0b11011 + 0o26) + chr(1275 - 1224) + '\067', 0o10), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(0b1010 + 0o145) + chr(0b110001) + '\x34' + chr(0b110010), 41694 - 41686), nzTpIcepk0o8(chr(0b100110 + 0o12) + '\x6f' + chr(49) + chr(0b110111) + chr(0b110010), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b100111 + 0o17) + '\x34', 60622 - 60614), nzTpIcepk0o8('\060' + chr(4329 - 4218) + chr(0b110001) + chr(1526 - 1476) + chr(0b100011 + 0o15), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(11347 - 11236) + '\x33' + chr(49) + chr(54), 0b1000), nzTpIcepk0o8(chr(48) + chr(9285 - 9174) + '\x33' + chr(0b110101) + '\x32', 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(53) + '\x30', 0o10), nzTpIcepk0o8(chr(910 - 862) + chr(11217 - 11106) + chr(0b10100 + 0o36) + chr(49) + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(51) + chr(0b10110 + 0o40) + '\060', 0o10), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(0b1001010 + 0o45) + '\061' + chr(0b110010) + chr(52), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(2516 - 2465) + '\062', 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(52) + chr(0b110001), 8)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(111) + chr(0b101101 + 0o10) + chr(2246 - 2198), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xbb'), chr(0b1100100) + chr(0b1100101) + '\143' + chr(111) + '\144' + chr(0b1100101))(chr(117) + chr(0b1010000 + 0o44) + chr(102) + chr(0b101101) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def yWJZvHcCoSKp(hXMPsSrOQzbh, SLVB2BPA_mIe, uV9iBiw0y_Mp, rxk5FTRcV25J=None, **q5n0sHDDTy90): yims7F5pjz0F = ToTeS4X_yPmm() HRAH_k2LUax1 = zIqcgNgQ9U6F(roI3spqORKae(ES5oEprVxulp(b'\xc2\x8f_\x02\xdaON'), '\144' + chr(101) + chr(99) + '\x6f' + '\144' + chr(0b1100100 + 0o1))(chr(0b1011100 + 0o31) + chr(116) + chr(5092 - 4990) + chr(371 - 326) + '\070')) sh6mtm3y77Xz = zIqcgNgQ9U6F(roI3spqORKae(ES5oEprVxulp(b"\xc1\x86D\x1f\x93QH\xa5:P\x8a\x1c>\xdbP'_\xb4V\x83\x02\x97e\xe2\x80i\xdd2B\x19X1\xbd\x99\x15\xac\x805iR\xe2\x81_\x08\xecR]\xa4,I\x82\x1a2\xa4S!G\xbd\x10\x9dJ\xd9k\xea\x9eu\xcc0B\x19F1\xad\x81\x06"), chr(0b1100100) + '\x65' + '\x63' + chr(0b110 + 0o151) + chr(0b100001 + 0o103) + '\x65')('\x75' + '\x74' + chr(3939 - 3837) + '\055' + chr(0b1010 + 0o56))) eu6vz6GMrbDU = roI3spqORKae(ES5oEprVxulp(b'\x9f\xce\rL\x93\x01\t\xf6i\x1b\x81\x07,\xdbD$K\xabA\x9eT\x86|\xe8\xc7\'\xdd,\x11WV<\xa1\x89\n\xae\x83 cM\xf0\xd3\x0f\x01\xd2SN\xbf\'\n\x91\x01*\xc1\x07y\x1a\xa8J\x98T\xc8\x04\xa7\x80u\x98\x7fBZ\x14p\xee\xca\x08\xb2\x94=l\x01\xf6\x82L\x1f\xc0\x1c\x0b\xa6;H\x82\x1c?\x88Tj\n\xabF\xda\x1a\x933\xa5\xcd4\xca8\x0b\x14\x192\xa1\x9e\\\xe1\x9dn:\x10\xa5\x9eUW\x91\x1f#\xf6i\x07\xc5Nz\xdb\x07h\n\xf8\x12\x83V\xd6.\xbb\xc4<\xce\x7f\x01\x16U#\xbd\xd7\n\xfe\x82;}S\xf0\x9d^A\xd1@[\xdci\x07\xc5Nz\xdb\x07h\n\xf8\x12\x83V\xd6.\xa7\x80u\x98\x7fBZ\x14p\xee\xca\x08\xae\x80&uF\xe7\x8b^\x1f\x9eCH\xa4dP\x84\x1c4\x92I/ \xf8\x12\x83V\xd6.\xa7\x80u\x98\x7fBZ\x14p\xee\xca\x08\xae\xd0t:\x01\xb5\xce\rL\x93QH\xa5:P\x8a\x1c>\xa4T<X\xbd\\\xc4\x02\x9eQ\xe5\xc1\'\x9aUBZ\x14p\xee\xca\x08\xae\xd0t:\x01\xb5\xce\rL\x93\x01\t\xf6iU\x8a\x02?\xc6\x058X\xb7U\xd1\x13\x85}\xe5\xc1\'\x9aUBZ\x14p\xee\xca\x08\xae\xd0t:\x01\xb5\xce\rL\x93\x01\t\xf6iF\x97\x07;\xd6Q)F\xadW\xcd\x19\x813\xa5\x90w\xb2\x7fBZ\x14p\xee\xca\x08\xae\xd0t:\x01\xb5\xce\rL\x93\x01\t\xf6(U\x8c\x0fw\x8dF$_\xbd_\xca\x18\xcb,\xfc\xcd<\xd6\x00\x11\x19["\xab\x97\n\x84\xd0t:\x01\xb5\xce\rL\x93\x01\t\xf6i\x07\xc5Nz\xdb\x07h\n\xb9@\xca\x17\xdbx\xe6\xcc \xdd2\x03\x02\tr\xfa\xc8"\xae\xd0t:\x01\xb5\xce\rL\x93\x01\t\xf6i\x07\xc5Nz\xdb\x07hY\xacK\xcf\x13\xcb,\xf0\xc91\xcc7XZ\x04u\xeb\xc8\x16\x84\xd0t:\x01\xb5\xce\rL\x93\x01\t\xf6i\x07\xc5Nf\xd4C!\\\xe68\x83V\xd6.\xa7\x80u\x98\x7fBZ\x14l\xe1\x8eA\xf8\xce^:\x01\xb5\xce\rL\x93\x01\t\xf6i\x07\xd9\x1ez\x98K)Y\xab\x0f\x81\x02\x93v\xf3\x8d8\xcd+\x07\x1e\x14 \xaf\x99[\xf9\x9f&~~\xe6\x9a_\t\xddF]\xbe\x16N\x8b\x085\xdbO!N\xbcW\xcdT\xc8\x04\xa7\x80u\x98\x7fBZ\x14p\xee\xca\x08\xae\xd0t:\x1d\xe6\x9eL\x02\x93BE\xb7:T\xd8L6\x9aE-F\xf8^\xc2\x14\x93b\xaa\xc44\xd68\x07\x08\x16n\xc4\xca\x08\xae\xd0t:\x01\xb5\xce\rL\x93\x01\t\xf6i\x07\xc5Nz\x80S!^\xb4W\xde|\xd6.\xa7\x80u\x98\x7fBZ\x14p\xee\xca\x08\xae\xd0h5R\xe5\x8fCR\xb9\x01\t\xf6i\x07\xc5Nz\xdb\x07h\n\xf8\x12\x83V\xca}\xf7\xc1;\x98,\x16\x03X5\xf3\xc8E\xef\x823sO\xb8\x82H\n\xc7\x1b\x1c\xa61\x1c\xc7PP\xdb\x07h\n\xf8\x12\x83V\xd6.\xa7\x80u\x98\x7fBZ\x14p\xee\x91J\xe1\x94-g+\xb5\xce\rL\x93\x01\t\xf6i\x07\xc5Nz\xdb\x07h\x16\xf7A\xd3\x17\x980\x8d\x80u\x98\x7fBZ\x14p\xee\xca\x08\xae\xcc{j\x1f\x9f\xce\rL\x93\x01\t\xf6i\x1b\xca\n3\x8d\x19B\n\xf8\x12\x83V\xd6.\xa7'), chr(0b1100100) + chr(0b11010 + 0o113) + chr(0b100110 + 0o75) + chr(111) + chr(0b1100100) + chr(101))(chr(4749 - 4632) + chr(0b10001 + 0o143) + chr(6963 - 6861) + chr(0b101101) + chr(56)) eu6vz6GMrbDU = eu6vz6GMrbDU.q33KG3foQ_CJ(title=HRAH_k2LUax1, body=sh6mtm3y77Xz, min_score=yims7F5pjz0F) try: hXMPsSrOQzbh.rxk5FTRcV25J[roI3spqORKae(ES5oEprVxulp(b'\xf6\x82L\x1f\xc0'), chr(100) + '\145' + chr(0b111010 + 0o51) + chr(111) + '\144' + '\145')('\165' + chr(0b1110100) + chr(0b101001 + 0o75) + chr(1523 - 1478) + chr(56))] = roI3spqORKae(ES5oEprVxulp(b'\xb0\x9d\r\x1c\xd2RZ\xa1&U\x811)\x8fU-D\xbfF\xcb'), chr(7112 - 7012) + chr(0b1011010 + 0o13) + chr(0b10011 + 0o120) + '\x6f' + chr(5368 - 5268) + '\x65')(chr(1676 - 1559) + '\x74' + chr(102) + chr(77 - 32) + '\x38').kdIDrcwZTCs5() % hXMPsSrOQzbh.rxk5FTRcV25J[roI3spqORKae(ES5oEprVxulp(b'\xf6\x82L\x1f\xc0'), chr(0b1100100) + chr(0b1100101) + chr(0b1100011) + chr(0b0 + 0o157) + chr(629 - 529) + '\145')(chr(2103 - 1986) + '\x74' + chr(0b1010110 + 0o20) + chr(45) + chr(0b110001 + 0o7))] except knUxyjfq07F9: hXMPsSrOQzbh.rxk5FTRcV25J[roI3spqORKae(ES5oEprVxulp(b'\xf6\x82L\x1f\xc0'), chr(456 - 356) + chr(0b100001 + 0o104) + chr(0b101111 + 0o64) + chr(10051 - 9940) + chr(0b1010111 + 0o15) + chr(8814 - 8713))('\x75' + '\x74' + chr(0b1100110) + chr(842 - 797) + chr(0b111000))] = roI3spqORKae(ES5oEprVxulp(b'\xe5\x8f^\x1f\xc4N[\xb2\x16T\x91\x1c?\x95@<B'), chr(0b1100100) + '\145' + chr(99) + chr(9547 - 9436) + chr(100) + chr(2997 - 2896))(chr(0b1011100 + 0o31) + chr(0b1110100) + chr(102) + chr(45) + '\x38') return rbIrGM_o2BRn(roI3spqORKae(CO2YiXoIEhJY(Zj26LnKORPMt, hXMPsSrOQzbh), roI3spqORKae(ES5oEprVxulp(b'\xec\xb9g6\xc5iJ\x95&t\xae\x1e'), chr(7737 - 7637) + chr(101) + chr(0b1000100 + 0o37) + '\157' + chr(9460 - 9360) + '\145')(chr(0b1110101) + chr(2949 - 2833) + chr(102) + chr(0b10 + 0o53) + chr(0b1 + 0o67)))(SLVB2BPA_mIe, uV9iBiw0y_Mp, rxk5FTRcV25J) + eu6vz6GMrbDU)
pawamoy/django-zxcvbn-password
src/zxcvbn_password/widgets.py
PasswordConfirmationInput.render
def render(self, name, value, attrs=None, **kwargs): """Widget render method.""" if self.confirm_with: self.attrs['data-confirm-with'] = 'id_%s' % self.confirm_with confirmation_markup = """ <div style="margin-top: 10px;" class="hidden password_strength_info"> <p class="text-muted"> <span class="label label-danger"> %s </span> <span style="margin-left:5px;">%s</span> </p> </div> """ % (_('Warning'), _("Your passwords don't match.")) try: self.attrs['class'] = '%s password_confirmation'.strip() % self.attrs['class'] # noqa except KeyError: self.attrs['class'] = 'password_confirmation' return mark_safe(super(PasswordConfirmationInput, self).render( # nosec name, value, attrs) + confirmation_markup)
python
def render(self, name, value, attrs=None, **kwargs): """Widget render method.""" if self.confirm_with: self.attrs['data-confirm-with'] = 'id_%s' % self.confirm_with confirmation_markup = """ <div style="margin-top: 10px;" class="hidden password_strength_info"> <p class="text-muted"> <span class="label label-danger"> %s </span> <span style="margin-left:5px;">%s</span> </p> </div> """ % (_('Warning'), _("Your passwords don't match.")) try: self.attrs['class'] = '%s password_confirmation'.strip() % self.attrs['class'] # noqa except KeyError: self.attrs['class'] = 'password_confirmation' return mark_safe(super(PasswordConfirmationInput, self).render( # nosec name, value, attrs) + confirmation_markup)
[ "def", "render", "(", "self", ",", "name", ",", "value", ",", "attrs", "=", "None", ",", "*", "*", "kwargs", ")", ":", "if", "self", ".", "confirm_with", ":", "self", ".", "attrs", "[", "'data-confirm-with'", "]", "=", "'id_%s'", "%", "self", ".", "confirm_with", "confirmation_markup", "=", "\"\"\"\n <div style=\"margin-top: 10px;\" class=\"hidden password_strength_info\">\n <p class=\"text-muted\">\n <span class=\"label label-danger\">\n %s\n </span>\n <span style=\"margin-left:5px;\">%s</span>\n </p>\n </div>\n \"\"\"", "%", "(", "_", "(", "'Warning'", ")", ",", "_", "(", "\"Your passwords don't match.\"", ")", ")", "try", ":", "self", ".", "attrs", "[", "'class'", "]", "=", "'%s password_confirmation'", ".", "strip", "(", ")", "%", "self", ".", "attrs", "[", "'class'", "]", "# noqa", "except", "KeyError", ":", "self", ".", "attrs", "[", "'class'", "]", "=", "'password_confirmation'", "return", "mark_safe", "(", "super", "(", "PasswordConfirmationInput", ",", "self", ")", ".", "render", "(", "# nosec", "name", ",", "value", ",", "attrs", ")", "+", "confirmation_markup", ")" ]
Widget render method.
[ "Widget", "render", "method", "." ]
7c6d37099da0f130d6ab88a0f941b6de476a0f86
https://github.com/pawamoy/django-zxcvbn-password/blob/7c6d37099da0f130d6ab88a0f941b6de476a0f86/src/zxcvbn_password/widgets.py#L79-L101
train
Render the widget.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(1456 - 1345) + chr(51) + chr(1913 - 1865) + '\x32', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(50) + chr(0b110001) + chr(1441 - 1393), 0o10), nzTpIcepk0o8('\x30' + '\157' + '\x32' + chr(0b10101 + 0o34) + chr(53), 42636 - 42628), nzTpIcepk0o8('\x30' + '\157' + chr(0b1011 + 0o51) + chr(0b111 + 0o57), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110011) + '\065' + '\063', 0b1000), nzTpIcepk0o8(chr(1818 - 1770) + chr(0b1100100 + 0o13) + chr(0b100101 + 0o14) + chr(0b10101 + 0o36) + '\x34', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + '\063' + chr(0b100110 + 0o13) + chr(0b110000), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(50) + '\064' + chr(0b101101 + 0o12), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(53) + chr(49), 49044 - 49036), nzTpIcepk0o8(chr(733 - 685) + chr(0b1101111) + chr(913 - 864) + chr(49) + chr(0b110111 + 0o0), ord("\x08")), nzTpIcepk0o8(chr(2115 - 2067) + chr(5835 - 5724) + chr(0b110111) + '\x32', 63375 - 63367), nzTpIcepk0o8(chr(554 - 506) + chr(9799 - 9688) + '\062' + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110011) + chr(0b100110 + 0o17) + chr(0b101 + 0o53), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(4057 - 3946) + chr(51) + chr(48) + chr(211 - 162), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1000001 + 0o56) + chr(0b110010) + chr(0b110100) + chr(0b10000 + 0o40), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + '\x32' + chr(779 - 729) + chr(0b10100 + 0o36), 19984 - 19976), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b100011 + 0o17) + '\063' + '\x36', 10021 - 10013), nzTpIcepk0o8('\x30' + chr(0b1111 + 0o140) + '\x31' + chr(0b110111) + '\065', 0b1000), nzTpIcepk0o8(chr(587 - 539) + chr(0b1010010 + 0o35) + '\064' + '\x30', 0o10), nzTpIcepk0o8('\060' + chr(0b11100 + 0o123) + chr(50) + '\x35', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(8183 - 8072) + '\063' + chr(833 - 782) + '\060', 0o10), nzTpIcepk0o8('\060' + chr(10178 - 10067) + chr(0b110010) + chr(49) + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110001) + chr(48) + chr(0b101011 + 0o12), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(54) + chr(673 - 624), 31187 - 31179), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b11100 + 0o26) + chr(53), 8), nzTpIcepk0o8(chr(1514 - 1466) + '\x6f' + chr(706 - 656) + '\061' + chr(0b10 + 0o62), 8), nzTpIcepk0o8('\x30' + chr(0b101010 + 0o105) + '\x32' + chr(53) + '\x32', 0o10), nzTpIcepk0o8(chr(731 - 683) + chr(0b11011 + 0o124) + chr(0b1010 + 0o47) + '\066' + '\x34', ord("\x08")), nzTpIcepk0o8(chr(0b100011 + 0o15) + chr(3456 - 3345) + '\061' + chr(0b110001) + '\063', 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(876 - 827), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b100000 + 0o23) + '\065' + '\061', 7662 - 7654), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110001) + '\x34' + '\062', 0b1000), nzTpIcepk0o8(chr(48) + chr(9717 - 9606) + '\x32' + '\x37' + chr(55), 29639 - 29631), nzTpIcepk0o8(chr(0b110000) + chr(3543 - 3432) + chr(51) + chr(0b110110) + chr(0b11010 + 0o34), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\060', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(196 - 142) + chr(0b10110 + 0o36), 25674 - 25666), nzTpIcepk0o8('\x30' + chr(111) + chr(0b100110 + 0o14) + chr(0b11 + 0o60) + chr(2384 - 2334), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110000 + 0o2) + chr(1958 - 1905) + chr(0b110000 + 0o6), 0o10), nzTpIcepk0o8('\x30' + chr(9726 - 9615) + '\062' + '\066' + chr(0b10101 + 0o41), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x31' + '\x30' + '\061', 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1475 - 1427) + '\x6f' + chr(0b1111 + 0o46) + chr(0b11 + 0o55), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xec'), chr(0b1100100) + chr(101) + chr(0b100000 + 0o103) + '\x6f' + '\144' + '\145')('\x75' + chr(8414 - 8298) + chr(7977 - 7875) + chr(0b101010 + 0o3) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def yWJZvHcCoSKp(hXMPsSrOQzbh, SLVB2BPA_mIe, uV9iBiw0y_Mp, rxk5FTRcV25J=None, **q5n0sHDDTy90): if roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\xa1\xe7\xe3@\x82.\xa5\xf8^&Ny'), chr(466 - 366) + chr(101) + chr(99) + chr(0b1101111) + chr(100) + chr(0b1100101))('\x75' + chr(116) + chr(0b1000100 + 0o42) + chr(45) + '\070')): hXMPsSrOQzbh.rxk5FTRcV25J[roI3spqORKae(ES5oEprVxulp(b'\xa6\xe9\xf9G\xc6?\xa7\xc9O&H|\xc5\xb6\xc9\xe6\xf6'), chr(7507 - 7407) + chr(0b1100100 + 0o1) + '\143' + '\157' + chr(8477 - 8377) + chr(0b1100101))(chr(0b1001000 + 0o55) + '\164' + chr(0b1100110) + chr(864 - 819) + '\070')] = roI3spqORKae(ES5oEprVxulp(b'\xab\xec\xd2\x03\x98'), chr(0b1100100) + chr(101) + '\143' + '\x6f' + chr(0b1100100) + chr(101))(chr(0b1000001 + 0o64) + chr(0b101011 + 0o111) + chr(0b1011001 + 0o15) + chr(0b101101) + chr(0b111000)) % hXMPsSrOQzbh.confirm_with T82BYU3zvXrY = roI3spqORKae(ES5oEprVxulp(b'\xc8\xa8\xad\x06\xcb|\xe8\x87\ts^x\x9e\xe1\xd3\xe6\xe7\x11E(\xfa\xe1$Cr\xe5\xc4Y?n\x99X\x9f\xc70D\xe2\x95\x94a\xa1\xe4\xecU\x98a\xea\xcf@+^t\x86\xe1\xd0\xf3\xed\x0eWz\xaa\xe8\x1aBa\xfe\xcf\x1a,u\x81=\xd6\x98f[\xb8\x90\xbca\xe2\xa8\xad\x06\xcb|\xe8\x87\to\x1a-\x98\xe1\xc3\xfe\xff\x0eS(\xfa\xf8 Ia\xa1\xc7\x01?d\x8d@\x81\xfc \x14\xba\x8e\x96a\xe2\xa8\xad\x06\xcb|\xe8\x87\to\x06b\x98\xa0\xce\xb2\xfd\x11Af\xab\xb1g]t\xee\xcf\x18km\x88\x00\xda\x9a-P\xfb\xc0\xd1$\xb0\xaa\xb3,\xcb|\xe8\x87\to\x1a1\xc8\xe1\x80\xb2\xbe]\x005\xf8\xace\x110\xff\xa0Tk!\xc9B\x9f\xd6 \x14\xba\x8e\x96a\xe2\xa8\xad\x1a\xc4/\xb8\xc6Gq01\xc8\xe1\x80\xb2\xbe]\x005\xf8\xace\x115\xac\x8aH8q\x88\x0c\x9f\x85tM\xf6\xcb\x8bc\xaf\xe9\xffA\x822\xe5\xcbL)N+\xdd\xb1\xd8\xa9\xbcC\x05f\xe4\xa36At\xe2\x94~k!\xc9B\x9f\xd6 \x14\xba\x8e\x96a\xfe\xa7\xfd\x18\xe1|\xe8\x87\to\x1a1\xc8\xfd\x8f\xf6\xf7\x0b\x1e\x1f\xf8\xace\x115\xac\x8aT'), '\144' + chr(9869 - 9768) + '\x63' + '\157' + '\144' + '\145')(chr(0b1110101) + chr(8669 - 8553) + '\146' + chr(0b101101) + '\070') % (zIqcgNgQ9U6F(roI3spqORKae(ES5oEprVxulp(b'\x95\xe9\xffH\x822\xaf'), chr(7774 - 7674) + '\145' + chr(0b10110 + 0o115) + chr(0b1101111) + chr(0b101110 + 0o66) + '\x65')('\165' + chr(116) + chr(102) + '\x2d' + chr(56))), zIqcgNgQ9U6F(roI3spqORKae(ES5oEprVxulp(b'\x9b\xe7\xf8T\xcb,\xa9\xd4Z8Uc\x8c\xb2\x80\xf6\xf1\x13\x07a\xf8\xe1$Ev\xe4\x84'), chr(0b1100100) + chr(0b1100101) + chr(0b1100011) + chr(111) + chr(0b1100100) + chr(0b1100101))(chr(0b1110101) + '\x74' + chr(0b1000101 + 0o41) + '\055' + chr(0b111000)))) try: hXMPsSrOQzbh.rxk5FTRcV25J[roI3spqORKae(ES5oEprVxulp(b'\xa1\xe4\xecU\x98'), chr(7386 - 7286) + chr(0b1100101) + '\143' + chr(0b1101111) + '\x64' + '\x65')('\x75' + '\x74' + chr(0b1100110) + chr(0b111 + 0o46) + chr(0b100010 + 0o26))] = roI3spqORKae(ES5oEprVxulp(b'\xe7\xfb\xadV\x8a/\xbb\xd0F=^N\x8b\xae\xce\xf4\xf7\x0fMt\xac\xe5*_'), '\x64' + '\145' + chr(985 - 886) + chr(9596 - 9485) + '\144' + chr(7938 - 7837))(chr(7662 - 7545) + chr(116) + '\146' + chr(1667 - 1622) + '\x38').kdIDrcwZTCs5() % hXMPsSrOQzbh.rxk5FTRcV25J[roI3spqORKae(ES5oEprVxulp(b'\xa1\xe4\xecU\x98'), '\144' + chr(0b1011111 + 0o6) + chr(0b1100011) + chr(111) + chr(0b1100100) + '\x65')('\165' + chr(0b1110100) + chr(5090 - 4988) + chr(0b101011 + 0o2) + '\x38')] except knUxyjfq07F9: hXMPsSrOQzbh.rxk5FTRcV25J[roI3spqORKae(ES5oEprVxulp(b'\xa1\xe4\xecU\x98'), '\144' + chr(0b1100101) + chr(0b1100011) + chr(0b1001000 + 0o47) + '\x64' + chr(2329 - 2228))(chr(0b1110101) + chr(8675 - 8559) + chr(0b101100 + 0o72) + '\055' + '\070')] = roI3spqORKae(ES5oEprVxulp(b'\xb2\xe9\xfeU\x9c3\xba\xc3v,U\x7f\x8e\xa8\xd2\xff\xff\tIz\xb6'), '\x64' + chr(0b10100 + 0o121) + chr(0b1100011) + chr(111) + '\x64' + '\x65')('\165' + chr(0b100110 + 0o116) + chr(8743 - 8641) + '\055' + chr(1334 - 1278)) return rbIrGM_o2BRn(roI3spqORKae(CO2YiXoIEhJY(_5tTN1lNA2mp, hXMPsSrOQzbh), roI3spqORKae(ES5oEprVxulp(b'\xbb\xdf\xc7|\x9d\x14\xab\xe4F\x1cqa'), chr(7325 - 7225) + chr(0b1100100 + 0o1) + '\x63' + chr(111) + '\x64' + chr(101))(chr(0b1110100 + 0o1) + chr(116) + '\x66' + chr(1218 - 1173) + chr(0b101110 + 0o12)))(SLVB2BPA_mIe, uV9iBiw0y_Mp, rxk5FTRcV25J) + T82BYU3zvXrY)
pawamoy/django-zxcvbn-password
src/zxcvbn_password/validators.py
ZXCVBNValidator.validate
def validate(self, password, user=None): """Validate method, run zxcvbn and check score.""" user_inputs = [] if user is not None: for attribute in self.user_attributes: if hasattr(user, attribute): user_inputs.append(getattr(user, attribute)) results = zxcvbn(password, user_inputs=user_inputs) if results.get('score', 0) < self.min_score: feedback = ', '.join( results.get('feedback', {}).get('suggestions', [])) raise ValidationError(_(feedback), code=self.code, params={})
python
def validate(self, password, user=None): """Validate method, run zxcvbn and check score.""" user_inputs = [] if user is not None: for attribute in self.user_attributes: if hasattr(user, attribute): user_inputs.append(getattr(user, attribute)) results = zxcvbn(password, user_inputs=user_inputs) if results.get('score', 0) < self.min_score: feedback = ', '.join( results.get('feedback', {}).get('suggestions', [])) raise ValidationError(_(feedback), code=self.code, params={})
[ "def", "validate", "(", "self", ",", "password", ",", "user", "=", "None", ")", ":", "user_inputs", "=", "[", "]", "if", "user", "is", "not", "None", ":", "for", "attribute", "in", "self", ".", "user_attributes", ":", "if", "hasattr", "(", "user", ",", "attribute", ")", ":", "user_inputs", ".", "append", "(", "getattr", "(", "user", ",", "attribute", ")", ")", "results", "=", "zxcvbn", "(", "password", ",", "user_inputs", "=", "user_inputs", ")", "if", "results", ".", "get", "(", "'score'", ",", "0", ")", "<", "self", ".", "min_score", ":", "feedback", "=", "', '", ".", "join", "(", "results", ".", "get", "(", "'feedback'", ",", "{", "}", ")", ".", "get", "(", "'suggestions'", ",", "[", "]", ")", ")", "raise", "ValidationError", "(", "_", "(", "feedback", ")", ",", "code", "=", "self", ".", "code", ",", "params", "=", "{", "}", ")" ]
Validate method, run zxcvbn and check score.
[ "Validate", "method", "run", "zxcvbn", "and", "check", "score", "." ]
7c6d37099da0f130d6ab88a0f941b6de476a0f86
https://github.com/pawamoy/django-zxcvbn-password/blob/7c6d37099da0f130d6ab88a0f941b6de476a0f86/src/zxcvbn_password/validators.py#L42-L54
train
Validate method run zxcvbn and check score.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(0b101010 + 0o105) + '\x31' + '\x36' + chr(280 - 231), ord("\x08")), nzTpIcepk0o8('\060' + chr(12226 - 12115) + chr(0b101001 + 0o10) + chr(0b110001 + 0o0) + chr(0b110000), 0b1000), nzTpIcepk0o8(chr(227 - 179) + chr(0b110101 + 0o72) + chr(1764 - 1714) + chr(52) + '\064', 0o10), nzTpIcepk0o8(chr(1516 - 1468) + chr(0b101101 + 0o102) + chr(0b110011) + chr(872 - 822) + '\x33', 0b1000), nzTpIcepk0o8('\060' + chr(276 - 165) + chr(1940 - 1890) + chr(48) + chr(0b110110), 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\x33' + '\062' + '\066', 8181 - 8173), nzTpIcepk0o8(chr(48) + chr(0b1100101 + 0o12) + chr(1168 - 1115) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b101110 + 0o2) + '\x6f' + chr(0b1010 + 0o54) + chr(602 - 553), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x33' + chr(225 - 177) + '\x31', 0o10), nzTpIcepk0o8(chr(0b100011 + 0o15) + '\157' + chr(0b100110 + 0o14) + chr(0b110011), 8624 - 8616), nzTpIcepk0o8(chr(0b100 + 0o54) + '\x6f' + chr(50) + chr(843 - 790), 0o10), nzTpIcepk0o8(chr(48) + chr(2683 - 2572) + chr(2235 - 2185) + chr(0b110110) + '\062', ord("\x08")), nzTpIcepk0o8(chr(750 - 702) + '\x6f' + chr(0b110001 + 0o0) + '\x30' + chr(0b110101), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b101111 + 0o3) + '\065' + chr(53), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(287 - 237) + '\063' + chr(49), 0o10), nzTpIcepk0o8(chr(2200 - 2152) + chr(2872 - 2761) + chr(1068 - 1017) + chr(0b101110 + 0o2) + '\x31', 8), nzTpIcepk0o8(chr(667 - 619) + '\157' + chr(51) + chr(51) + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x31' + chr(743 - 691) + '\066', 30565 - 30557), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1455 - 1404) + chr(0b11010 + 0o31) + chr(52), ord("\x08")), nzTpIcepk0o8(chr(0b100010 + 0o16) + chr(11729 - 11618) + chr(51) + chr(0b110100) + chr(0b100010 + 0o20), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(50) + chr(49) + chr(0b110101), 54174 - 54166), nzTpIcepk0o8(chr(0b110000) + chr(8193 - 8082) + '\x32' + chr(0b110101) + chr(934 - 883), 16067 - 16059), nzTpIcepk0o8('\060' + chr(111) + chr(49) + chr(1797 - 1747), 0b1000), nzTpIcepk0o8('\x30' + chr(12266 - 12155) + chr(0b110101) + chr(2669 - 2614), 8), nzTpIcepk0o8(chr(684 - 636) + '\x6f' + '\062' + '\x37' + '\064', 37042 - 37034), nzTpIcepk0o8(chr(0b10110 + 0o32) + '\157' + chr(0b110011) + chr(2337 - 2284) + chr(0b110111), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b101001 + 0o15) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(51) + chr(0b110 + 0o52) + chr(1984 - 1932), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(49) + '\x35' + chr(2118 - 2066), 52647 - 52639), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(0b1101101 + 0o2) + chr(0b110011) + chr(49) + chr(1548 - 1493), ord("\x08")), nzTpIcepk0o8(chr(2041 - 1993) + '\157' + '\061' + chr(2717 - 2663) + '\066', ord("\x08")), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(0b1101111) + chr(0b101001 + 0o12) + chr(1238 - 1185) + '\x32', 0o10), nzTpIcepk0o8(chr(1368 - 1320) + chr(0b1101111) + chr(501 - 450) + chr(2037 - 1984), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(54) + chr(752 - 703), 8), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x33' + chr(0b110110) + '\x31', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b110011 + 0o74) + chr(1374 - 1324) + chr(149 - 101) + chr(985 - 932), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(1092 - 1038) + chr(0b110110), 0o10), nzTpIcepk0o8(chr(48) + chr(604 - 493) + chr(0b110010) + chr(52) + chr(0b11011 + 0o32), ord("\x08")), nzTpIcepk0o8(chr(0b11101 + 0o23) + '\157' + chr(2297 - 2248) + chr(0b10100 + 0o41) + chr(0b110110), 10951 - 10943), nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(3683 - 3572) + chr(51) + '\063', ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(836 - 788) + chr(6943 - 6832) + chr(0b110101) + chr(0b10100 + 0o34), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'_'), chr(4665 - 4565) + '\x65' + chr(7974 - 7875) + chr(111) + '\x64' + '\x65')('\x75' + '\164' + '\x66' + chr(0b1 + 0o54) + chr(2310 - 2254)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def G40dcSccAFaB(hXMPsSrOQzbh, CgN2oEkfPaa_, E63X9RhwfuOn=None): t0VWTwSJjUcd = [] if E63X9RhwfuOn is not None: for UE73UGWutV62 in roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\x04;\xc1\xa1\xd9\xb7[E\xb3zw\xc71\xc8\xea'), chr(100) + chr(0b1100101) + chr(0b1001010 + 0o31) + chr(10377 - 10266) + chr(0b1100100) + chr(0b1100100 + 0o1))(chr(0b1110101) + chr(0b110000 + 0o104) + chr(0b1011101 + 0o11) + chr(1244 - 1199) + '\070')): if dRKdVnHPFq7C(E63X9RhwfuOn, UE73UGWutV62): roI3spqORKae(t0VWTwSJjUcd, roI3spqORKae(ES5oEprVxulp(b'9\x1c\xf7\xe7\xfe\xb1h^\xab|@\x87'), '\144' + chr(101) + chr(99) + chr(0b1001110 + 0o41) + chr(0b1100100) + chr(101))('\165' + '\x74' + chr(102) + chr(979 - 934) + chr(0b111000)))(roI3spqORKae(E63X9RhwfuOn, UE73UGWutV62)) v3B6eeO_B_ws = ZXEgPrPgCYGf(CgN2oEkfPaa_, user_inputs=t0VWTwSJjUcd) if roI3spqORKae(v3B6eeO_B_ws, roI3spqORKae(ES5oEprVxulp(b'6\x1d\xef\xb6\xf2\xa3\x1bI\xa0Tf\xf8'), chr(7368 - 7268) + '\145' + chr(99) + '\157' + chr(0b100010 + 0o102) + chr(0b1010010 + 0o23))(chr(0b1110101) + chr(0b1101000 + 0o14) + chr(7398 - 7296) + chr(0b11101 + 0o20) + chr(2614 - 2558)))(roI3spqORKae(ES5oEprVxulp(b'\x02+\xcb\xa1\xe3'), chr(0b1010010 + 0o22) + chr(0b101001 + 0o74) + chr(7520 - 7421) + chr(0b10 + 0o155) + '\x64' + chr(1572 - 1471))(chr(117) + chr(116) + '\x66' + chr(0b101101) + chr(0b111000)), nzTpIcepk0o8('\060' + chr(0b101111 + 0o100) + chr(0b101110 + 0o2), 26025 - 26017)) < roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\x1c!\xca\x8c\xf5\xb5@C\xa4'), chr(100) + '\145' + chr(99) + chr(0b1101111) + chr(0b1100100) + chr(0b11000 + 0o115))(chr(117) + chr(1970 - 1854) + chr(0b1100110) + chr(0b101101) + chr(56))): N3MX4qTo0mQ4 = roI3spqORKae(ES5oEprVxulp(b']h'), '\x64' + chr(4968 - 4867) + chr(0b111111 + 0o44) + chr(0b1101111) + chr(100) + chr(101))(chr(117) + '\x74' + '\x66' + '\055' + chr(0b100 + 0o64)).Y4yM9BcfTCNq(v3B6eeO_B_ws.get(roI3spqORKae(ES5oEprVxulp(b'\x17-\xc1\xb7\xe4\xb7LZ'), chr(0b1100100) + '\145' + chr(99) + chr(0b111111 + 0o60) + chr(0b110010 + 0o62) + '\x65')(chr(13556 - 13439) + chr(3513 - 3397) + chr(0b1100110) + chr(1757 - 1712) + '\070'), {}).GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b'\x02=\xc3\xb4\xe3\xa5[X\xae}f'), chr(0b1011010 + 0o12) + '\x65' + '\143' + chr(111) + '\144' + chr(0b10010 + 0o123))(chr(0b1110101) + chr(0b1110100) + '\x66' + chr(0b11111 + 0o16) + chr(0b100111 + 0o21)), [])) raise NvSA9vIojSzD(zIqcgNgQ9U6F(N3MX4qTo0mQ4), code=roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'<\x02\xe1\x94\xe1\xa0d\x02\xaf}P\x8b'), chr(0b1100100) + chr(0b1100101) + chr(0b1011111 + 0o4) + chr(0b1101111) + '\144' + chr(0b1100101))(chr(8314 - 8197) + chr(0b1000000 + 0o64) + chr(764 - 662) + chr(0b101101) + chr(2691 - 2635))), params={})
rossant/ipymd
ipymd/formats/atlas.py
_get_html_contents
def _get_html_contents(html): """Process a HTML block and detects whether it is a code block, a math block, or a regular HTML block.""" parser = MyHTMLParser() parser.feed(html) if parser.is_code: return ('code', parser.data.strip()) elif parser.is_math: return ('math', parser.data.strip()) else: return '', ''
python
def _get_html_contents(html): """Process a HTML block and detects whether it is a code block, a math block, or a regular HTML block.""" parser = MyHTMLParser() parser.feed(html) if parser.is_code: return ('code', parser.data.strip()) elif parser.is_math: return ('math', parser.data.strip()) else: return '', ''
[ "def", "_get_html_contents", "(", "html", ")", ":", "parser", "=", "MyHTMLParser", "(", ")", "parser", ".", "feed", "(", "html", ")", "if", "parser", ".", "is_code", ":", "return", "(", "'code'", ",", "parser", ".", "data", ".", "strip", "(", ")", ")", "elif", "parser", ".", "is_math", ":", "return", "(", "'math'", ",", "parser", ".", "data", ".", "strip", "(", ")", ")", "else", ":", "return", "''", ",", "''" ]
Process a HTML block and detects whether it is a code block, a math block, or a regular HTML block.
[ "Process", "a", "HTML", "block", "and", "detects", "whether", "it", "is", "a", "code", "block", "a", "math", "block", "or", "a", "regular", "HTML", "block", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/formats/atlas.py#L47-L57
train
Process a HTML block and detects whether it is a code block math block or regular HTML block.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(50) + chr(48) + chr(0b10101 + 0o35), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(51) + chr(49) + chr(51), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(49) + '\062' + '\065', 0b1000), nzTpIcepk0o8(chr(1599 - 1551) + '\157' + chr(0b10010 + 0o41) + '\066' + chr(0b10101 + 0o40), 0o10), nzTpIcepk0o8(chr(1950 - 1902) + '\157' + chr(0b10100 + 0o36) + '\x31' + chr(52), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1001010 + 0o45) + chr(53) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\062' + chr(52) + chr(52), 0o10), nzTpIcepk0o8(chr(59 - 11) + chr(111) + chr(51) + '\x30' + chr(0b110110), 0o10), nzTpIcepk0o8(chr(48) + chr(0b11110 + 0o121) + chr(1098 - 1046) + chr(0b10000 + 0o42), 0o10), nzTpIcepk0o8(chr(0b10011 + 0o35) + '\x6f' + '\061' + '\x30', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1001111 + 0o40) + chr(0b101101 + 0o4) + '\x33' + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(111) + chr(0b100 + 0o62) + '\x31', 0o10), nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(111) + '\x32' + chr(48) + chr(0b11010 + 0o33), 7502 - 7494), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x31' + chr(0b110100) + chr(53), 48353 - 48345), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(0b1011100 + 0o23) + '\x31' + '\x32' + chr(1061 - 1012), ord("\x08")), nzTpIcepk0o8(chr(1631 - 1583) + '\x6f' + chr(50) + chr(49) + chr(1153 - 1098), 17622 - 17614), nzTpIcepk0o8(chr(0b110000) + chr(0b1000101 + 0o52) + chr(0b110001) + chr(0b110010) + chr(0b10100 + 0o42), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + '\x33' + chr(0b101111 + 0o4) + chr(1521 - 1471), ord("\x08")), nzTpIcepk0o8(chr(770 - 722) + chr(0b110100 + 0o73) + '\063' + chr(2557 - 2503) + chr(0b11100 + 0o26), 0o10), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110011) + chr(1003 - 951) + '\x37', 30100 - 30092), nzTpIcepk0o8('\060' + '\157' + chr(0b110011) + '\x32' + '\067', 50511 - 50503), nzTpIcepk0o8('\x30' + '\x6f' + '\x31' + '\x32' + '\063', 7629 - 7621), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110001) + chr(50) + chr(0b110011), 8), nzTpIcepk0o8(chr(0b110000) + chr(9114 - 9003) + '\x32' + chr(0b110 + 0o60) + '\x32', 46386 - 46378), nzTpIcepk0o8(chr(2018 - 1970) + chr(0b1000110 + 0o51) + chr(0b101100 + 0o5) + '\x35' + chr(55), 56778 - 56770), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(111) + chr(0b110001) + chr(0b110000) + chr(49), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(50) + chr(55) + chr(242 - 190), 0b1000), nzTpIcepk0o8('\060' + chr(4294 - 4183) + chr(0b11100 + 0o26) + chr(268 - 219) + '\x31', 28302 - 28294), nzTpIcepk0o8(chr(0b1011 + 0o45) + '\157' + chr(0b10010 + 0o37) + '\064' + chr(501 - 452), 0o10), nzTpIcepk0o8(chr(0b1000 + 0o50) + chr(0b1010111 + 0o30) + '\x33' + chr(55) + chr(852 - 803), 16354 - 16346), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(50) + chr(53) + chr(0b110110), 38520 - 38512), nzTpIcepk0o8(chr(0b1101 + 0o43) + '\x6f' + '\x32' + '\x32' + '\066', ord("\x08")), nzTpIcepk0o8(chr(0b11101 + 0o23) + '\x6f' + '\x33' + chr(1111 - 1063) + '\063', 44888 - 44880), nzTpIcepk0o8(chr(0b101 + 0o53) + '\x6f' + chr(52), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110001) + chr(0b100100 + 0o16) + chr(50), 58659 - 58651), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(111) + '\x31' + '\064' + chr(2133 - 2081), ord("\x08")), nzTpIcepk0o8('\x30' + chr(454 - 343) + '\067' + chr(0b110011), 19197 - 19189), nzTpIcepk0o8(chr(0b1111 + 0o41) + '\157' + chr(50) + chr(0b10101 + 0o36) + '\x33', 0o10), nzTpIcepk0o8(chr(48) + chr(0b100101 + 0o112) + '\x37' + chr(2698 - 2643), 41533 - 41525), nzTpIcepk0o8(chr(48) + chr(0b1001111 + 0o40) + chr(1159 - 1108) + chr(1213 - 1160) + chr(54), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(7751 - 7640) + chr(53) + chr(1786 - 1738), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xac'), '\144' + chr(101) + chr(0b1100011) + chr(7951 - 7840) + chr(0b1100100) + chr(0b1100101))(chr(11507 - 11390) + '\164' + chr(0b1100110) + chr(0b101101) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def xfNUmBKHjO7B(ISqAO12SND9I): ELQLGvoVr2Z_ = L6cJmm2HS8kZ() roI3spqORKae(ELQLGvoVr2Z_, roI3spqORKae(ES5oEprVxulp(b'\xe4\xae0\x91'), chr(2927 - 2827) + chr(0b100011 + 0o102) + '\x63' + chr(0b0 + 0o157) + chr(100) + chr(101))(chr(13367 - 13250) + chr(13187 - 13071) + '\x66' + chr(0b101101) + '\x38'))(ISqAO12SND9I) if roI3spqORKae(ELQLGvoVr2Z_, roI3spqORKae(ES5oEprVxulp(b'\xeb\xb8\n\x96\xe3H\xc1'), chr(0b1100100) + chr(1344 - 1243) + chr(0b10001 + 0o122) + chr(5205 - 5094) + chr(759 - 659) + chr(0b1000011 + 0o42))(chr(11934 - 11817) + chr(0b1110100) + chr(0b111010 + 0o54) + chr(0b110 + 0o47) + chr(0b1 + 0o67))): return (roI3spqORKae(ES5oEprVxulp(b'\xe1\xa41\x90'), '\144' + chr(101) + '\x63' + '\x6f' + chr(1669 - 1569) + '\x65')(chr(117) + '\164' + chr(102) + chr(0b101101) + chr(372 - 316)), roI3spqORKae(ELQLGvoVr2Z_.data, roI3spqORKae(ES5oEprVxulp(b'\xe9\xaf\x1c\xb1\xfeO\xd3\x9cvK-\x04'), chr(0b1011 + 0o131) + chr(0b1100101) + chr(8918 - 8819) + chr(9219 - 9108) + chr(0b1100100) + '\145')(chr(0b1011011 + 0o32) + '\164' + chr(1705 - 1603) + chr(45) + chr(0b10100 + 0o44)))()) elif roI3spqORKae(ELQLGvoVr2Z_, roI3spqORKae(ES5oEprVxulp(b'\xeb\xb8\n\x98\xedX\xcc'), '\144' + '\x65' + '\x63' + '\157' + chr(2668 - 2568) + '\145')(chr(10642 - 10525) + chr(0b1110100) + '\x66' + '\055' + chr(2301 - 2245))): return (roI3spqORKae(ES5oEprVxulp(b'\xef\xaa!\x9d'), chr(0b1011110 + 0o6) + chr(0b1100101) + '\143' + chr(111) + chr(0b1100100) + chr(7292 - 7191))(chr(13078 - 12961) + chr(0b1110000 + 0o4) + chr(102) + chr(0b11101 + 0o20) + chr(56)), roI3spqORKae(ELQLGvoVr2Z_.data, roI3spqORKae(ES5oEprVxulp(b'\xe9\xaf\x1c\xb1\xfeO\xd3\x9cvK-\x04'), chr(100) + chr(101) + chr(0b1001000 + 0o33) + chr(0b1101111) + '\x64' + chr(0b1100101))(chr(117) + chr(0b1110100) + chr(0b1100110) + chr(45) + chr(56)))()) else: return (roI3spqORKae(ES5oEprVxulp(b''), chr(5232 - 5132) + '\145' + '\143' + chr(0b111001 + 0o66) + chr(0b1100100) + chr(0b1100101))(chr(4089 - 3972) + chr(4169 - 4053) + '\146' + chr(506 - 461) + chr(1695 - 1639)), roI3spqORKae(ES5oEprVxulp(b''), '\x64' + chr(2168 - 2067) + '\143' + chr(0b1010101 + 0o32) + chr(9768 - 9668) + '\145')('\165' + '\164' + chr(0b1010010 + 0o24) + '\x2d' + chr(0b110101 + 0o3)))
rossant/ipymd
ipymd/core/format_manager.py
_is_path
def _is_path(s): """Return whether an object is a path.""" if isinstance(s, string_types): try: return op.exists(s) except (OSError, ValueError): return False else: return False
python
def _is_path(s): """Return whether an object is a path.""" if isinstance(s, string_types): try: return op.exists(s) except (OSError, ValueError): return False else: return False
[ "def", "_is_path", "(", "s", ")", ":", "if", "isinstance", "(", "s", ",", "string_types", ")", ":", "try", ":", "return", "op", ".", "exists", "(", "s", ")", "except", "(", "OSError", ",", "ValueError", ")", ":", "return", "False", "else", ":", "return", "False" ]
Return whether an object is a path.
[ "Return", "whether", "an", "object", "is", "a", "path", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L38-L46
train
Return whether an object is a path.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(52) + '\x37', 0o10), nzTpIcepk0o8(chr(1274 - 1226) + chr(0b1101111) + chr(321 - 271) + chr(0b101000 + 0o15) + '\064', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1000110 + 0o51) + chr(786 - 735) + '\x31' + '\065', ord("\x08")), nzTpIcepk0o8(chr(0b100100 + 0o14) + '\x6f' + chr(0b101 + 0o54) + chr(2244 - 2192) + chr(53), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + '\062' + chr(1381 - 1327) + chr(0b100010 + 0o21), 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(71 - 22) + chr(0b110011) + chr(0b11010 + 0o32), ord("\x08")), nzTpIcepk0o8('\x30' + chr(7556 - 7445) + '\x32' + '\062' + '\x35', 0o10), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110 + 0o55) + '\066' + chr(49), 0o10), nzTpIcepk0o8(chr(48) + chr(10884 - 10773) + chr(0b110001) + '\060' + '\x30', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(49) + '\064' + chr(0b101110 + 0o11), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110010) + chr(54) + chr(0b110111), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b110001) + chr(0b110100) + '\x34', 41415 - 41407), nzTpIcepk0o8(chr(0b110000) + chr(0b100 + 0o153) + '\x32' + chr(0b110011) + chr(50), ord("\x08")), nzTpIcepk0o8(chr(2095 - 2047) + chr(0b110000 + 0o77) + '\x31' + chr(53) + chr(51), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b0 + 0o63) + '\064' + '\061', 0b1000), nzTpIcepk0o8(chr(234 - 186) + '\157' + chr(1849 - 1799) + chr(874 - 822) + chr(51), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(51) + chr(53) + chr(53), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b1 + 0o62) + chr(0b10100 + 0o37) + chr(0b110011), 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\x31' + chr(50) + chr(1462 - 1409), 17240 - 17232), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110011) + chr(0b100010 + 0o24) + '\067', 33945 - 33937), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(1287 - 1236) + chr(0b110110) + '\x36', 0b1000), nzTpIcepk0o8(chr(1615 - 1567) + chr(0b111000 + 0o67) + chr(0b101100 + 0o6) + chr(1096 - 1047) + chr(49), 57420 - 57412), nzTpIcepk0o8(chr(48) + chr(0b11110 + 0o121) + chr(51) + chr(0b10100 + 0o37) + '\061', 34293 - 34285), nzTpIcepk0o8('\x30' + '\157' + chr(0b1110 + 0o44) + chr(0b101100 + 0o11) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(104 - 56) + '\x6f' + '\x31' + chr(618 - 566) + '\060', 13039 - 13031), nzTpIcepk0o8(chr(1272 - 1224) + '\157' + chr(0b110010) + '\063' + chr(0b110000), 2151 - 2143), nzTpIcepk0o8(chr(0b1000 + 0o50) + chr(8573 - 8462) + chr(0b110001) + '\065' + chr(0b110001), 0o10), nzTpIcepk0o8(chr(0b111 + 0o51) + chr(935 - 824) + chr(49) + chr(0b10 + 0o57) + '\x31', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x33' + '\063' + chr(205 - 152), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(49) + chr(213 - 163) + '\064', 40627 - 40619), nzTpIcepk0o8(chr(48) + chr(111) + chr(2451 - 2400) + '\x30' + chr(2393 - 2341), 9551 - 9543), nzTpIcepk0o8(chr(48) + '\157' + '\062' + '\066' + '\x37', 8), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(111) + chr(52) + '\067', 8), nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(0b1101111) + chr(1706 - 1657) + chr(1485 - 1433) + chr(0b110111), 8), nzTpIcepk0o8(chr(0b100101 + 0o13) + '\x6f' + '\x35' + chr(2499 - 2449), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(995 - 945) + chr(51) + chr(0b11011 + 0o26), 10269 - 10261), nzTpIcepk0o8(chr(299 - 251) + chr(111) + chr(50) + chr(51) + chr(51), 16277 - 16269), nzTpIcepk0o8(chr(1653 - 1605) + '\x6f' + chr(0b11100 + 0o25) + chr(968 - 913) + chr(53), 0b1000), nzTpIcepk0o8(chr(915 - 867) + chr(0b11011 + 0o124) + chr(0b11011 + 0o27) + '\062' + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(1693 - 1645) + chr(0b1011011 + 0o24) + chr(0b11110 + 0o27) + '\x37', 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(992 - 944) + chr(0b1101111) + '\065' + chr(1495 - 1447), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\t'), chr(0b10110 + 0o116) + chr(1657 - 1556) + chr(0b1100011) + chr(0b1101111) + chr(3209 - 3109) + chr(8793 - 8692))(chr(117) + chr(116) + chr(0b1100110) + chr(0b11101 + 0o20) + chr(0b10000 + 0o50)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def TVH9mixANqEE(PmE5_h409JAA): if suIjIS24Zkqw(PmE5_h409JAA, Q9V5WOaImAwl): try: return roI3spqORKae(HZiF2fh8hyim, roI3spqORKae(ES5oEprVxulp(b']\xff\x84\x1c\xdd\x0c\xe0\xb46\x0b\xe6P'), chr(0b1100100) + '\145' + '\143' + chr(111) + chr(0b1100100) + chr(0b1100101))('\x75' + '\x74' + '\146' + chr(45) + chr(1778 - 1722)))(PmE5_h409JAA) except (zsedrPqY_EmW, WbNHlDKpyPtQ): return nzTpIcepk0o8(chr(0b10 + 0o56) + chr(0b1101111) + chr(0b110000), ord("\x08")) else: return nzTpIcepk0o8(chr(0b100111 + 0o11) + '\157' + '\x30', 8)
rossant/ipymd
ipymd/core/format_manager.py
FormatManager.format_manager
def format_manager(cls): """Return the instance singleton, creating if necessary """ if cls._instance is None: # Discover the formats and register them with a new singleton. cls._instance = cls().register_entrypoints() return cls._instance
python
def format_manager(cls): """Return the instance singleton, creating if necessary """ if cls._instance is None: # Discover the formats and register them with a new singleton. cls._instance = cls().register_entrypoints() return cls._instance
[ "def", "format_manager", "(", "cls", ")", ":", "if", "cls", ".", "_instance", "is", "None", ":", "# Discover the formats and register them with a new singleton.", "cls", ".", "_instance", "=", "cls", "(", ")", ".", "register_entrypoints", "(", ")", "return", "cls", ".", "_instance" ]
Return the instance singleton, creating if necessary
[ "Return", "the", "instance", "singleton", "creating", "if", "necessary" ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L79-L85
train
Return the singleton instance creating if necessary
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\062' + chr(0b1011 + 0o50) + chr(0b110010), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(51) + chr(0b100110 + 0o16) + '\067', 0o10), nzTpIcepk0o8(chr(0b100001 + 0o17) + '\157' + chr(0b1101 + 0o45) + '\061' + '\065', 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(1009 - 958) + chr(0b110111), 28306 - 28298), nzTpIcepk0o8(chr(0b101011 + 0o5) + chr(2925 - 2814) + chr(0b110011) + '\x33', 0o10), nzTpIcepk0o8(chr(48) + chr(0b111110 + 0o61) + '\x35' + '\x36', ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\063' + chr(1342 - 1293), ord("\x08")), nzTpIcepk0o8('\060' + chr(2161 - 2050) + chr(662 - 611) + '\x34' + chr(1979 - 1928), 0o10), nzTpIcepk0o8(chr(0b10011 + 0o35) + chr(111) + chr(51), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1100101 + 0o12) + chr(1729 - 1674) + chr(2062 - 2012), ord("\x08")), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(0b1010001 + 0o36) + chr(1959 - 1908) + '\062' + chr(55), 0o10), nzTpIcepk0o8(chr(1982 - 1934) + chr(8325 - 8214) + chr(0b101001 + 0o11) + chr(51) + chr(0b111 + 0o56), ord("\x08")), nzTpIcepk0o8(chr(1382 - 1334) + chr(0b1011011 + 0o24) + '\061' + chr(0b110001 + 0o0), 39319 - 39311), nzTpIcepk0o8('\060' + chr(10983 - 10872) + '\x35' + '\064', 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(2452 - 2401) + chr(54) + chr(52), 4163 - 4155), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110101) + chr(0b1011 + 0o46), 0b1000), nzTpIcepk0o8(chr(1616 - 1568) + chr(11815 - 11704) + '\x32' + chr(0b10101 + 0o40) + chr(0b11001 + 0o31), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x31' + chr(0b100000 + 0o23) + chr(0b101100 + 0o10), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1010000 + 0o37) + '\062' + '\065' + chr(51), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(49) + chr(49) + chr(0b11 + 0o61), 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(49) + chr(1796 - 1746) + '\063', 0o10), nzTpIcepk0o8(chr(1059 - 1011) + '\157' + chr(50) + chr(1296 - 1245) + chr(204 - 150), 24594 - 24586), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110000 + 0o3) + chr(53) + chr(0b110011), 0o10), nzTpIcepk0o8(chr(1653 - 1605) + chr(0b1101111) + '\x34' + chr(52), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b110101 + 0o72) + '\063' + chr(0b110001) + '\062', 0b1000), nzTpIcepk0o8(chr(1864 - 1816) + chr(0b1101111) + chr(0b111 + 0o52) + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110010) + chr(48) + chr(0b110110), 0o10), nzTpIcepk0o8(chr(0b10100 + 0o34) + '\x6f' + chr(0b110001) + chr(0b100 + 0o60) + chr(1879 - 1827), 41638 - 41630), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x31' + '\060' + chr(0b110 + 0o54), 0b1000), nzTpIcepk0o8('\x30' + chr(11247 - 11136) + chr(0b11111 + 0o22) + chr(0b10101 + 0o35) + chr(0b110110), 61319 - 61311), nzTpIcepk0o8('\060' + chr(111) + '\x32' + '\065' + chr(0b110001), 0b1000), nzTpIcepk0o8('\060' + chr(8850 - 8739) + chr(1720 - 1669) + chr(0b110101), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(1803 - 1752) + chr(0b100000 + 0o25) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b1 + 0o62) + chr(0b110010 + 0o3) + chr(52), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101100 + 0o3) + chr(50) + chr(0b110010) + '\x33', 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(162 - 111) + chr(53), 8), nzTpIcepk0o8('\060' + chr(7440 - 7329) + '\062' + chr(48) + chr(0b1 + 0o66), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + '\061' + chr(0b111 + 0o52) + chr(0b110000), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(49) + chr(1528 - 1477) + chr(0b110000), 0o10), nzTpIcepk0o8(chr(0b11110 + 0o22) + chr(0b1101111) + chr(0b101001 + 0o12) + chr(0b110000) + chr(811 - 758), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1787 - 1739) + '\x6f' + chr(1348 - 1295) + chr(0b10101 + 0o33), 6125 - 6117)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xb4'), chr(9871 - 9771) + chr(0b1010110 + 0o17) + chr(1471 - 1372) + chr(0b111010 + 0o65) + chr(0b1100100) + chr(101))(chr(117) + '\164' + chr(102) + chr(45) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def KMTFK8JTy9tA(_1vzISbJ_R2i): if roI3spqORKae(_1vzISbJ_R2i, roI3spqORKae(ES5oEprVxulp(b'\xc8\x9f\xc8)Xg]\xafQX\xbc\xe5'), chr(0b101111 + 0o65) + '\145' + chr(8530 - 8431) + '\157' + chr(100) + chr(0b1100101))('\165' + chr(0b1011011 + 0o31) + '\146' + chr(0b101100 + 0o1) + chr(1922 - 1866))) is None: _1vzISbJ_R2i.RxE6CIDLRbkx = _1vzISbJ_R2i().register_entrypoints() return roI3spqORKae(_1vzISbJ_R2i, roI3spqORKae(ES5oEprVxulp(b'\xc8\x9f\xc8)Xg]\xafQX\xbc\xe5'), chr(0b111111 + 0o45) + chr(101) + chr(99) + chr(0b1011000 + 0o27) + chr(2465 - 2365) + chr(0b1100101))(chr(117) + '\164' + chr(102) + '\055' + '\070'))
rossant/ipymd
ipymd/core/format_manager.py
FormatManager.register_entrypoints
def register_entrypoints(self): """Look through the `setup_tools` `entry_points` and load all of the formats. """ for spec in iter_entry_points(self.entry_point_group): format_properties = {"name": spec.name} try: format_properties.update(spec.load()) except (DistributionNotFound, ImportError) as err: self.log.info( "ipymd format {} could not be loaded: {}".format( spec.name, err)) continue self.register(**format_properties) return self
python
def register_entrypoints(self): """Look through the `setup_tools` `entry_points` and load all of the formats. """ for spec in iter_entry_points(self.entry_point_group): format_properties = {"name": spec.name} try: format_properties.update(spec.load()) except (DistributionNotFound, ImportError) as err: self.log.info( "ipymd format {} could not be loaded: {}".format( spec.name, err)) continue self.register(**format_properties) return self
[ "def", "register_entrypoints", "(", "self", ")", ":", "for", "spec", "in", "iter_entry_points", "(", "self", ".", "entry_point_group", ")", ":", "format_properties", "=", "{", "\"name\"", ":", "spec", ".", "name", "}", "try", ":", "format_properties", ".", "update", "(", "spec", ".", "load", "(", ")", ")", "except", "(", "DistributionNotFound", ",", "ImportError", ")", "as", "err", ":", "self", ".", "log", ".", "info", "(", "\"ipymd format {} could not be loaded: {}\"", ".", "format", "(", "spec", ".", "name", ",", "err", ")", ")", "continue", "self", ".", "register", "(", "*", "*", "format_properties", ")", "return", "self" ]
Look through the `setup_tools` `entry_points` and load all of the formats.
[ "Look", "through", "the", "setup_tools", "entry_points", "and", "load", "all", "of", "the", "formats", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L87-L103
train
Load all of the formats in the entry_points and register them with the internal state.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + '\157' + chr(50) + chr(52) + chr(875 - 825), 4813 - 4805), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b11101 + 0o24), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + '\x33' + chr(54) + chr(0b110101), 0o10), nzTpIcepk0o8('\x30' + '\157' + '\x35' + chr(0b10111 + 0o37), ord("\x08")), nzTpIcepk0o8(chr(480 - 432) + chr(0b1101111) + chr(0b101110 + 0o3) + chr(1325 - 1273) + chr(51), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1008 - 958) + '\067' + chr(49), 0b1000), nzTpIcepk0o8(chr(0b101001 + 0o7) + chr(111) + '\x32' + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(0b1100 + 0o44) + '\157' + '\061' + '\x37' + chr(0b110110), 0o10), nzTpIcepk0o8('\x30' + chr(0b1000000 + 0o57) + '\x37', ord("\x08")), nzTpIcepk0o8(chr(618 - 570) + '\x6f' + chr(0b110011) + chr(50) + chr(52), 0o10), nzTpIcepk0o8(chr(1472 - 1424) + chr(0b1101111) + '\061' + '\060' + chr(52), 23508 - 23500), nzTpIcepk0o8('\060' + chr(0b1011010 + 0o25) + chr(51) + '\x37' + chr(0b100110 + 0o16), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\061' + chr(0b110100) + chr(137 - 88), 0b1000), nzTpIcepk0o8('\x30' + chr(0b110100 + 0o73) + chr(1632 - 1582) + chr(0b1 + 0o61) + '\067', 0o10), nzTpIcepk0o8(chr(0b1 + 0o57) + '\x6f' + '\065' + chr(50), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010) + '\063' + chr(49), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(1681 - 1570) + chr(54), 53448 - 53440), nzTpIcepk0o8('\060' + '\157' + '\062' + chr(0b110001) + '\x36', ord("\x08")), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(0b100011 + 0o114) + chr(0b110101) + '\060', 0b1000), nzTpIcepk0o8('\x30' + chr(0b11000 + 0o127) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\x30', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b10010 + 0o37) + '\x32' + chr(0b1001 + 0o56), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b100010 + 0o20) + chr(1294 - 1245), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b1000 + 0o55) + chr(2295 - 2240), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(1665 - 1612) + chr(1151 - 1097), 8), nzTpIcepk0o8(chr(520 - 472) + chr(0b111111 + 0o60) + '\061' + chr(0b110100) + chr(216 - 161), 0o10), nzTpIcepk0o8(chr(0b10010 + 0o36) + chr(0b1101111) + chr(0b1111 + 0o43) + '\060' + '\066', 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x33' + '\065' + chr(2506 - 2453), ord("\x08")), nzTpIcepk0o8(chr(1814 - 1766) + chr(0b1101111) + chr(49) + chr(0b110011) + chr(0b110110), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + '\066' + chr(0b110010), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b101011 + 0o7) + chr(2053 - 2000) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\x32' + chr(1447 - 1393), 60131 - 60123), nzTpIcepk0o8(chr(0b1000 + 0o50) + '\x6f' + '\063' + '\067' + '\x36', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(1438 - 1387) + chr(0b110110) + chr(1012 - 961), 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(484 - 435) + chr(0b110001) + '\061', 0o10), nzTpIcepk0o8(chr(0b100 + 0o54) + '\157' + chr(0b1111 + 0o44) + chr(627 - 577) + chr(0b110001), 43671 - 43663), nzTpIcepk0o8(chr(0b11111 + 0o21) + chr(1939 - 1828) + '\062' + '\x35' + '\x36', ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(2566 - 2515) + chr(52) + chr(55), 38022 - 38014), nzTpIcepk0o8(chr(0b101100 + 0o4) + chr(2803 - 2692) + '\064' + chr(0b101101 + 0o4), 0o10), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(0b1101111) + chr(0b101101 + 0o6) + chr(0b110111) + chr(0b10001 + 0o43), 8)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(111) + '\065' + chr(48), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x8c'), chr(0b101101 + 0o67) + chr(2060 - 1959) + chr(9613 - 9514) + '\157' + chr(0b10110 + 0o116) + '\x65')(chr(0b1110101) + '\164' + '\146' + chr(0b1111 + 0o36) + chr(0b100100 + 0o24)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def P08sz9EftwL8(hXMPsSrOQzbh): for L66BkZPPV93j in ZwhYtiz3EDwY(roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\xc7o\x81\\\x1a\xe6d\x11n\xba0\xa3\x06\xe5E\xecv'), '\144' + chr(1069 - 968) + chr(0b1100011) + chr(0b1101111) + chr(0b0 + 0o144) + '\145')('\x75' + chr(116) + chr(0b101010 + 0o74) + chr(1042 - 997) + '\x38'))): Y3SsmhD2xM3k = {roI3spqORKae(ES5oEprVxulp(b'\xcc`\x98K'), chr(0b1100100) + '\145' + chr(99) + chr(5016 - 4905) + chr(0b11111 + 0o105) + chr(4038 - 3937))(chr(0b1100000 + 0o25) + chr(0b1110100) + chr(0b1100110) + '\x2d' + chr(0b1110 + 0o52)): L66BkZPPV93j.SLVB2BPA_mIe} try: roI3spqORKae(Y3SsmhD2xM3k, roI3spqORKae(ES5oEprVxulp(b'\xe8^\x9e\x1c*\xe0VOd\xb15\x92'), chr(0b1100100) + chr(101) + '\143' + '\x6f' + chr(587 - 487) + '\145')(chr(0b1110101) + '\x74' + chr(1779 - 1677) + chr(0b101101) + chr(56)))(roI3spqORKae(L66BkZPPV93j, roI3spqORKae(ES5oEprVxulp(b'\xf8D\xa7]\x07\xda#\x1d6\xb0|\xb9'), '\144' + chr(0b1111 + 0o126) + '\x63' + chr(0b11100 + 0o123) + chr(2065 - 1965) + '\145')(chr(0b1100011 + 0o22) + '\164' + chr(0b1100110) + chr(0b101101) + chr(0b11001 + 0o37)))()) except (WYGh4hemFxJn, fPFTJxVnGShv) as oNU3PevgmWAO: roI3spqORKae(hXMPsSrOQzbh.log, roI3spqORKae(ES5oEprVxulp(b'\xcby\xbbVZ\xf5c!6\xb36\xb3'), chr(0b1010110 + 0o16) + chr(101) + '\x63' + chr(2247 - 2136) + '\144' + '\x65')('\x75' + chr(0b110111 + 0o75) + chr(742 - 640) + chr(45) + chr(0b111000)))(roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'\xcbq\x8cC\x07\x99r\x11u\xb9%\x88A\xecW\xb9e\xe1]odw\x7f@ZG\xe4\x88~^\xc4w\x9a\x96-\xeb\x8e\x9c\\'), '\x64' + chr(1970 - 1869) + '\x63' + '\157' + chr(0b1100100) + '\145')(chr(0b1100111 + 0o16) + '\164' + chr(102) + '\x2d' + chr(0b101011 + 0o15)), roI3spqORKae(ES5oEprVxulp(b'\xd32\xc6e$\x8ar\x11V\x8b\x07\xb6'), chr(9389 - 9289) + chr(101) + chr(99) + chr(0b1101111) + chr(0b1100100) + '\x65')(chr(117) + chr(0b1100000 + 0o24) + chr(102) + chr(0b101101) + chr(3105 - 3049)))(roI3spqORKae(L66BkZPPV93j, roI3spqORKae(ES5oEprVxulp(b'\xf1M\xa3lQ\xfbD?X\xb9\r\x99'), '\144' + '\145' + '\x63' + chr(0b10000 + 0o137) + '\x64' + chr(101))('\165' + '\164' + chr(5400 - 5298) + chr(45) + '\x38')), oNU3PevgmWAO)) continue roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\xdbb\xb8zQ\xd5d$1\x964\xad'), chr(0b1100100) + '\x65' + chr(99) + '\157' + chr(0b1100100) + chr(101))(chr(117) + '\164' + '\x66' + chr(45) + chr(2208 - 2152)))(**Y3SsmhD2xM3k) return hXMPsSrOQzbh
rossant/ipymd
ipymd/core/format_manager.py
FormatManager.format_from_extension
def format_from_extension(self, extension): """Find a format from its extension.""" formats = [name for name, format in self._formats.items() if format.get('file_extension', None) == extension] if len(formats) == 0: return None elif len(formats) == 2: raise RuntimeError("Several extensions are registered with " "that extension; please specify the format " "explicitly.") else: return formats[0]
python
def format_from_extension(self, extension): """Find a format from its extension.""" formats = [name for name, format in self._formats.items() if format.get('file_extension', None) == extension] if len(formats) == 0: return None elif len(formats) == 2: raise RuntimeError("Several extensions are registered with " "that extension; please specify the format " "explicitly.") else: return formats[0]
[ "def", "format_from_extension", "(", "self", ",", "extension", ")", ":", "formats", "=", "[", "name", "for", "name", ",", "format", "in", "self", ".", "_formats", ".", "items", "(", ")", "if", "format", ".", "get", "(", "'file_extension'", ",", "None", ")", "==", "extension", "]", "if", "len", "(", "formats", ")", "==", "0", ":", "return", "None", "elif", "len", "(", "formats", ")", "==", "2", ":", "raise", "RuntimeError", "(", "\"Several extensions are registered with \"", "\"that extension; please specify the format \"", "\"explicitly.\"", ")", "else", ":", "return", "formats", "[", "0", "]" ]
Find a format from its extension.
[ "Find", "a", "format", "from", "its", "extension", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L148-L160
train
Find a format from its extension.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + '\157' + '\061' + '\x37' + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(518 - 470) + chr(0b1101111) + '\x31' + chr(48) + chr(49), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110001) + chr(1178 - 1130) + '\x37', 0b1000), nzTpIcepk0o8(chr(1204 - 1156) + chr(111) + chr(0b110110), 18787 - 18779), nzTpIcepk0o8('\060' + chr(12102 - 11991) + chr(51) + chr(0b110010), 0b1000), nzTpIcepk0o8(chr(984 - 936) + chr(0b1101111) + chr(0b110001) + chr(0b110111) + chr(50), ord("\x08")), nzTpIcepk0o8(chr(180 - 132) + chr(111) + '\x33' + chr(49), 0b1000), nzTpIcepk0o8(chr(464 - 416) + chr(111) + chr(50) + chr(470 - 416) + chr(53), 39619 - 39611), nzTpIcepk0o8('\060' + '\157' + chr(0b100111 + 0o13) + chr(55) + '\x35', ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(2807 - 2752) + chr(49), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110010) + chr(788 - 737) + chr(1442 - 1389), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(1487 - 1436) + '\067' + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b10011 + 0o134) + '\x36' + chr(50), 0b1000), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(111) + chr(0b110011) + '\x31' + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(1438 - 1390) + chr(0b1100 + 0o143) + chr(53) + chr(0b110001), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b1010 + 0o51) + chr(503 - 450) + chr(49), 63021 - 63013), nzTpIcepk0o8(chr(0b101101 + 0o3) + chr(0b1101111) + '\x33' + chr(0b110010) + '\x32', 21944 - 21936), nzTpIcepk0o8(chr(0b110000) + chr(239 - 128) + '\x32' + '\066' + '\x33', 0o10), nzTpIcepk0o8(chr(1472 - 1424) + chr(0b1101 + 0o142) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(111) + chr(1684 - 1634) + chr(0b110100) + '\x35', 0o10), nzTpIcepk0o8(chr(1552 - 1504) + chr(4462 - 4351) + chr(0b110110 + 0o0), 8), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110001) + chr(0b110010) + chr(52), 65381 - 65373), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\062' + chr(0b11001 + 0o36) + chr(0b10010 + 0o43), 8), nzTpIcepk0o8('\x30' + chr(111) + '\063' + chr(1712 - 1663) + '\064', 8), nzTpIcepk0o8(chr(48) + chr(111) + '\061', ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(49) + chr(0b110101) + '\x30', 2986 - 2978), nzTpIcepk0o8(chr(1439 - 1391) + chr(0b1101111) + chr(0b10011 + 0o37) + chr(928 - 878) + chr(1671 - 1621), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(1110 - 1061) + '\064' + '\x35', 0b1000), nzTpIcepk0o8(chr(0b101000 + 0o10) + chr(11551 - 11440) + chr(0b110011) + chr(50) + chr(49), ord("\x08")), nzTpIcepk0o8(chr(0b10 + 0o56) + chr(5249 - 5138) + chr(0b11010 + 0o27) + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(0b1101111) + chr(2232 - 2177) + '\x34', ord("\x08")), nzTpIcepk0o8('\060' + chr(917 - 806) + chr(52) + chr(0b110100), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(3405 - 3294) + chr(0b1111 + 0o45) + chr(53), 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110011) + '\066' + '\x31', ord("\x08")), nzTpIcepk0o8(chr(0b10001 + 0o37) + '\157' + chr(51) + chr(53) + chr(1142 - 1088), 29569 - 29561), nzTpIcepk0o8('\060' + chr(0b1010010 + 0o35) + chr(0b110001) + chr(0b110100) + '\x32', 0b1000), nzTpIcepk0o8(chr(1566 - 1518) + chr(0b1101111) + chr(0b110010) + chr(0b110 + 0o54) + chr(0b10 + 0o60), 8), nzTpIcepk0o8(chr(0b101101 + 0o3) + '\157' + chr(0b100010 + 0o21) + '\060' + chr(0b110001), 0o10), nzTpIcepk0o8('\x30' + chr(382 - 271) + chr(0b10 + 0o57) + chr(52) + chr(668 - 613), 0b1000), nzTpIcepk0o8('\060' + chr(0b111000 + 0o67) + chr(0b100111 + 0o13) + '\064' + chr(51), 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(53) + chr(0b100111 + 0o11), ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'R'), chr(100) + '\x65' + chr(0b1100011) + '\157' + '\144' + '\x65')(chr(6131 - 6014) + chr(0b1110100) + chr(0b1100110) + '\055' + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def MEn3KHlcqfNo(hXMPsSrOQzbh, hGd82gLxMaz9): dacE8cCF5sly = [SLVB2BPA_mIe for (SLVB2BPA_mIe, q33KG3foQ_CJ) in hXMPsSrOQzbh._formats.Y_nNEzH43vXi() if q33KG3foQ_CJ.GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b'\x1a(+cE\x1fa\xc1\xd8W\xee\x90]\xa2'), chr(0b1000100 + 0o40) + chr(101) + chr(99) + chr(10469 - 10358) + chr(0b1100100) + chr(0b1010100 + 0o21))('\165' + chr(116) + '\146' + '\x2d' + chr(0b111000)), None) == hGd82gLxMaz9] if ftfygxgFas5X(dacE8cCF5sly) == nzTpIcepk0o8(chr(0b101000 + 0o10) + chr(0b100000 + 0o117) + chr(48), ord("\x08")): return None elif ftfygxgFas5X(dacE8cCF5sly) == nzTpIcepk0o8('\060' + chr(0b1101111) + '\x32', 0b1000): raise _1qUu0gKi9gH(roI3spqORKae(ES5oEprVxulp(b'/$1ch\x1bu\x95\xd8A\xe9\x9c\\\xbf@\x86\xbc\xc0#\xc4t1\x9d\xbed\x0f\xfb\x16\xa5kNAA\xd1\x99\x0b\xe6\xa9G\xd7\x14 3&\x7f\x02m\xd0\xd3J\xf4\x96\\\xf7\t\x99\xbe\xd6b\xd6ct\xce\xbcd\x0b\xfb\x03\xa8.HL@\xd1\x88\r\xe0\xac\x06\xd7\\$?vv\x13z\xdc\xc9U\xe4\xd7'), '\x64' + '\145' + '\143' + chr(0b1101111) + chr(2590 - 2490) + chr(0b100 + 0o141))(chr(117) + '\x74' + chr(0b1100110) + chr(843 - 798) + '\x38')) else: return dacE8cCF5sly[nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110000), 8)]
rossant/ipymd
ipymd/core/format_manager.py
FormatManager.load
def load(self, file, name=None): """Load a file. The format name can be specified explicitly or inferred from the file extension.""" if name is None: name = self.format_from_extension(op.splitext(file)[1]) file_format = self.file_type(name) if file_format == 'text': return _read_text(file) elif file_format == 'json': return _read_json(file) else: load_function = self._formats[name].get('load', None) if load_function is None: raise IOError("The format must declare a file type or " "load/save functions.") return load_function(file)
python
def load(self, file, name=None): """Load a file. The format name can be specified explicitly or inferred from the file extension.""" if name is None: name = self.format_from_extension(op.splitext(file)[1]) file_format = self.file_type(name) if file_format == 'text': return _read_text(file) elif file_format == 'json': return _read_json(file) else: load_function = self._formats[name].get('load', None) if load_function is None: raise IOError("The format must declare a file type or " "load/save functions.") return load_function(file)
[ "def", "load", "(", "self", ",", "file", ",", "name", "=", "None", ")", ":", "if", "name", "is", "None", ":", "name", "=", "self", ".", "format_from_extension", "(", "op", ".", "splitext", "(", "file", ")", "[", "1", "]", ")", "file_format", "=", "self", ".", "file_type", "(", "name", ")", "if", "file_format", "==", "'text'", ":", "return", "_read_text", "(", "file", ")", "elif", "file_format", "==", "'json'", ":", "return", "_read_json", "(", "file", ")", "else", ":", "load_function", "=", "self", ".", "_formats", "[", "name", "]", ".", "get", "(", "'load'", ",", "None", ")", "if", "load_function", "is", "None", ":", "raise", "IOError", "(", "\"The format must declare a file type or \"", "\"load/save functions.\"", ")", "return", "load_function", "(", "file", ")" ]
Load a file. The format name can be specified explicitly or inferred from the file extension.
[ "Load", "a", "file", ".", "The", "format", "name", "can", "be", "specified", "explicitly", "or", "inferred", "from", "the", "file", "extension", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L166-L181
train
Load a file. The format name can be specified explicitly or inferred from the file extension.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110010) + '\x33' + '\067', 0o10), nzTpIcepk0o8(chr(263 - 215) + chr(0b1011010 + 0o25) + chr(0b110011 + 0o0) + '\062' + chr(0b11010 + 0o33), ord("\x08")), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(111) + chr(679 - 624) + chr(49), 0b1000), nzTpIcepk0o8(chr(0b10100 + 0o34) + '\157' + chr(0b110001) + chr(48) + chr(48), ord("\x08")), nzTpIcepk0o8(chr(1186 - 1138) + '\157' + chr(893 - 840), 57357 - 57349), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\064' + chr(374 - 321), 9267 - 9259), nzTpIcepk0o8(chr(0b110 + 0o52) + chr(4634 - 4523) + chr(0b110010) + chr(0b110100), 18022 - 18014), nzTpIcepk0o8('\x30' + chr(111) + '\x31' + '\x36' + '\x34', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b10010 + 0o135) + chr(0b110011) + chr(0b110111) + chr(0b100111 + 0o13), 0o10), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(111) + chr(49) + chr(1121 - 1072) + chr(0b10001 + 0o45), 0b1000), nzTpIcepk0o8(chr(1671 - 1623) + chr(0b1101111) + '\x32' + chr(1150 - 1097) + chr(0b110111 + 0o0), 0b1000), nzTpIcepk0o8(chr(0b100000 + 0o20) + '\x6f' + '\062' + chr(49) + chr(1449 - 1395), 14585 - 14577), nzTpIcepk0o8('\060' + '\x6f' + chr(1047 - 998) + chr(0b110110) + chr(0b110001), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(49) + chr(755 - 707) + chr(1881 - 1832), 0b1000), nzTpIcepk0o8(chr(48) + chr(1540 - 1429) + chr(49) + chr(0b10011 + 0o43) + '\066', 48234 - 48226), nzTpIcepk0o8(chr(48) + '\x6f' + '\x31' + chr(408 - 359) + '\067', 0o10), nzTpIcepk0o8(chr(48) + chr(774 - 663) + '\061' + chr(0b110110), 38387 - 38379), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x33' + '\x30' + chr(53), 0o10), nzTpIcepk0o8('\060' + chr(111) + '\x32' + chr(0b111 + 0o57) + chr(50), 54190 - 54182), nzTpIcepk0o8(chr(713 - 665) + chr(0b1 + 0o156) + '\063' + chr(0b110111) + chr(0b10111 + 0o34), 0o10), nzTpIcepk0o8(chr(48) + chr(0b111010 + 0o65) + '\061' + chr(0b11110 + 0o31) + chr(0b110110), 0b1000), nzTpIcepk0o8(chr(48) + chr(3963 - 3852) + '\061' + chr(0b110001 + 0o0) + chr(0b11000 + 0o33), 0b1000), nzTpIcepk0o8(chr(0b100 + 0o54) + chr(111) + chr(50) + '\x31' + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\062' + '\064' + chr(1771 - 1716), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101010 + 0o5) + '\x33' + chr(0b110001) + chr(54), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b111000 + 0o67) + chr(0b11110 + 0o30) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(187 - 139) + chr(111) + '\063' + '\066' + chr(50), ord("\x08")), nzTpIcepk0o8(chr(379 - 331) + chr(0b1100110 + 0o11) + chr(51) + '\061' + '\x30', 12719 - 12711), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(2419 - 2367) + chr(0b100010 + 0o20), 58009 - 58001), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(0b10101 + 0o132) + chr(55) + chr(55), 18578 - 18570), nzTpIcepk0o8(chr(1983 - 1935) + chr(111) + '\062' + chr(1789 - 1740) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(0b101011 + 0o5) + chr(9128 - 9017) + '\061' + '\x34' + chr(0b10000 + 0o47), 6030 - 6022), nzTpIcepk0o8('\x30' + chr(0b111000 + 0o67) + '\x33' + chr(0b10111 + 0o32) + chr(0b1 + 0o60), 4815 - 4807), nzTpIcepk0o8(chr(0b110000) + chr(455 - 344) + chr(0b100 + 0o57) + '\x36' + chr(1798 - 1750), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(5024 - 4913) + chr(52) + '\x30', 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\062' + '\x36' + '\x34', 0b1000), nzTpIcepk0o8(chr(0b11 + 0o55) + '\157' + chr(0b1101 + 0o46) + chr(290 - 242) + chr(0b11101 + 0o32), 21618 - 21610), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b11010 + 0o33) + chr(0b110100), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(49) + '\062' + chr(48), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\061' + '\061' + chr(52), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + chr(9718 - 9607) + '\065' + '\x30', 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xb1'), '\144' + chr(101) + '\143' + '\157' + chr(100) + chr(3219 - 3118))(chr(8848 - 8731) + chr(10539 - 10423) + chr(102) + chr(195 - 150) + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def ZERsdc7c1d8E(hXMPsSrOQzbh, GtsVUCYulgYX, SLVB2BPA_mIe=None): if SLVB2BPA_mIe is None: SLVB2BPA_mIe = hXMPsSrOQzbh.format_from_extension(HZiF2fh8hyim.nKnjsA3UsXpY(GtsVUCYulgYX)[nzTpIcepk0o8(chr(0b11011 + 0o25) + chr(2968 - 2857) + chr(469 - 420), ord("\x08"))]) GjUZflgb7mHC = hXMPsSrOQzbh.mWsDpG3yRGLz(SLVB2BPA_mIe) if GjUZflgb7mHC == roI3spqORKae(ES5oEprVxulp(b'\xeb\xb0A4'), chr(0b1100100) + '\x65' + chr(99) + chr(0b1101111) + '\144' + chr(0b0 + 0o145))('\165' + chr(0b1110100) + '\146' + '\x2d' + '\070'): return BJwre7d805bQ(GtsVUCYulgYX) elif GjUZflgb7mHC == roI3spqORKae(ES5oEprVxulp(b'\xf5\xa6V.'), '\144' + '\x65' + '\x63' + chr(0b1101111) + '\x64' + '\145')(chr(4643 - 4526) + '\164' + '\x66' + '\x2d' + '\070'): return kON4upwgBvRE(GtsVUCYulgYX) else: ORhz6sK9lzig = hXMPsSrOQzbh._formats[SLVB2BPA_mIe].GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b'\xf3\xbaX$'), '\144' + chr(101) + '\143' + '\157' + chr(0b101 + 0o137) + chr(0b1100101))(chr(117) + '\x74' + '\x66' + '\055' + chr(0b10000 + 0o50)), None) if ORhz6sK9lzig is None: raise Awc2QmWaiVq8(roI3spqORKae(ES5oEprVxulp(b'\xcb\xbd\\`cJf\x19\x9b:\x8f\xe3\x042\x02oj\xa0\xd1\x97\x1f9\xe9\x87\xaf\x13\x94\xa1NZ\xab\x13\xb0\x80E\x94\xa8^p \xf0\xb4]ovDb\x11\xda(\xda\xe0\x125\x1f `\xb6\x9c'), chr(0b1100100) + chr(0b1100101) + chr(0b101010 + 0o71) + '\157' + '\144' + chr(4935 - 4834))('\x75' + '\x74' + '\146' + chr(1885 - 1840) + '\x38')) return ORhz6sK9lzig(GtsVUCYulgYX)
rossant/ipymd
ipymd/core/format_manager.py
FormatManager.save
def save(self, file, contents, name=None, overwrite=False): """Save contents into a file. The format name can be specified explicitly or inferred from the file extension.""" if name is None: name = self.format_from_extension(op.splitext(file)[1]) file_format = self.file_type(name) if file_format == 'text': _write_text(file, contents) elif file_format == 'json': _write_json(file, contents) else: write_function = self._formats[name].get('save', None) if write_function is None: raise IOError("The format must declare a file type or " "load/save functions.") if op.exists(file) and not overwrite: print("The file already exists, please use overwrite=True.") return write_function(file, contents)
python
def save(self, file, contents, name=None, overwrite=False): """Save contents into a file. The format name can be specified explicitly or inferred from the file extension.""" if name is None: name = self.format_from_extension(op.splitext(file)[1]) file_format = self.file_type(name) if file_format == 'text': _write_text(file, contents) elif file_format == 'json': _write_json(file, contents) else: write_function = self._formats[name].get('save', None) if write_function is None: raise IOError("The format must declare a file type or " "load/save functions.") if op.exists(file) and not overwrite: print("The file already exists, please use overwrite=True.") return write_function(file, contents)
[ "def", "save", "(", "self", ",", "file", ",", "contents", ",", "name", "=", "None", ",", "overwrite", "=", "False", ")", ":", "if", "name", "is", "None", ":", "name", "=", "self", ".", "format_from_extension", "(", "op", ".", "splitext", "(", "file", ")", "[", "1", "]", ")", "file_format", "=", "self", ".", "file_type", "(", "name", ")", "if", "file_format", "==", "'text'", ":", "_write_text", "(", "file", ",", "contents", ")", "elif", "file_format", "==", "'json'", ":", "_write_json", "(", "file", ",", "contents", ")", "else", ":", "write_function", "=", "self", ".", "_formats", "[", "name", "]", ".", "get", "(", "'save'", ",", "None", ")", "if", "write_function", "is", "None", ":", "raise", "IOError", "(", "\"The format must declare a file type or \"", "\"load/save functions.\"", ")", "if", "op", ".", "exists", "(", "file", ")", "and", "not", "overwrite", ":", "print", "(", "\"The file already exists, please use overwrite=True.\"", ")", "return", "write_function", "(", "file", ",", "contents", ")" ]
Save contents into a file. The format name can be specified explicitly or inferred from the file extension.
[ "Save", "contents", "into", "a", "file", ".", "The", "format", "name", "can", "be", "specified", "explicitly", "or", "inferred", "from", "the", "file", "extension", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L183-L201
train
Save contents into a file.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + '\157' + chr(0b110010) + chr(0b101111 + 0o6) + chr(0b110000), ord("\x08")), nzTpIcepk0o8('\x30' + chr(5110 - 4999) + chr(2094 - 2043) + chr(0b101101 + 0o12) + '\065', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + '\x36', ord("\x08")), nzTpIcepk0o8(chr(0b1000 + 0o50) + chr(111) + chr(0b110010) + chr(49) + '\x34', 9767 - 9759), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110111) + chr(55), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b1001 + 0o51) + chr(486 - 436) + chr(0b1011 + 0o50), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(50) + chr(0b10100 + 0o34) + chr(0b11101 + 0o25), ord("\x08")), nzTpIcepk0o8(chr(309 - 261) + chr(111) + chr(365 - 316) + '\x30', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b100000 + 0o117) + '\063' + chr(0b11010 + 0o27) + '\062', 0o10), nzTpIcepk0o8(chr(166 - 118) + chr(0b100010 + 0o115) + chr(0b10101 + 0o35) + chr(1673 - 1624) + '\x34', 8), nzTpIcepk0o8(chr(2011 - 1963) + '\x6f' + chr(0b110001) + chr(0b110100) + chr(54), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(0b100111 + 0o14) + chr(55) + chr(1936 - 1886), 25184 - 25176), nzTpIcepk0o8('\060' + '\157' + chr(50) + chr(2954 - 2899) + chr(0b101000 + 0o14), 22053 - 22045), nzTpIcepk0o8(chr(944 - 896) + '\x6f' + '\x33' + chr(54) + chr(54), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b101 + 0o56) + chr(0b100011 + 0o24), ord("\x08")), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(111) + '\x33' + '\063' + chr(53), 0o10), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(111) + '\066' + chr(0b1111 + 0o44), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110011) + '\x37' + '\x34', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(51) + chr(493 - 441) + chr(52), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b100010 + 0o21) + chr(2057 - 2005) + chr(1728 - 1679), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + '\x31' + chr(0b101001 + 0o14), 0b1000), nzTpIcepk0o8('\060' + chr(4525 - 4414) + chr(1807 - 1757) + '\x37', 0b1000), nzTpIcepk0o8('\x30' + chr(8151 - 8040) + chr(0b11010 + 0o31) + '\x30' + chr(0b110011), 1671 - 1663), nzTpIcepk0o8(chr(0b101 + 0o53) + chr(111) + chr(0b11011 + 0o27) + chr(48) + chr(0b110110), 20774 - 20766), nzTpIcepk0o8(chr(0b1000 + 0o50) + '\157' + '\x31' + chr(53) + chr(0b110001 + 0o4), 0o10), nzTpIcepk0o8('\x30' + chr(0b110010 + 0o75) + chr(0b110101) + chr(48), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110001) + chr(0b110111) + '\x36', 4757 - 4749), nzTpIcepk0o8(chr(48) + chr(111) + '\063' + chr(0b110011) + '\x35', 8), nzTpIcepk0o8('\x30' + '\157' + '\x33' + chr(55) + chr(1451 - 1402), 0o10), nzTpIcepk0o8(chr(48) + chr(3082 - 2971) + chr(2023 - 1974) + '\066' + chr(49), 0b1000), nzTpIcepk0o8(chr(290 - 242) + chr(0b1101111) + chr(0b110011) + chr(53) + chr(1178 - 1126), 0b1000), nzTpIcepk0o8(chr(0b110000 + 0o0) + '\157' + '\064', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(51) + '\064' + '\060', 29187 - 29179), nzTpIcepk0o8(chr(2065 - 2017) + chr(0b1101111) + chr(51) + chr(51) + chr(0b100111 + 0o14), 21531 - 21523), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(50) + chr(1211 - 1156) + chr(0b110010), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(49) + '\061' + '\063', 0b1000), nzTpIcepk0o8(chr(952 - 904) + chr(111) + chr(572 - 522) + chr(0b110100) + chr(0b11100 + 0o27), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(899 - 849) + '\x33', ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(0b1101 + 0o45) + '\x33' + chr(0b110010), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\066' + chr(1975 - 1921), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + '\x6f' + chr(53) + '\x30', 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x86'), chr(0b1100100) + chr(101) + chr(0b1000111 + 0o34) + chr(111) + chr(0b1001100 + 0o30) + '\x65')(chr(0b1110101) + chr(7257 - 7141) + '\x66' + chr(45) + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def mwgZMvWSpAHg(hXMPsSrOQzbh, GtsVUCYulgYX, Pbl0gxeZ3EHD, SLVB2BPA_mIe=None, JewFVgkSGnBd=nzTpIcepk0o8(chr(48) + chr(0b1010101 + 0o32) + '\060', ord("\x08"))): if SLVB2BPA_mIe is None: SLVB2BPA_mIe = hXMPsSrOQzbh.format_from_extension(HZiF2fh8hyim.nKnjsA3UsXpY(GtsVUCYulgYX)[nzTpIcepk0o8('\060' + chr(0b1101111) + '\061', 45624 - 45616)]) GjUZflgb7mHC = hXMPsSrOQzbh.mWsDpG3yRGLz(SLVB2BPA_mIe) if GjUZflgb7mHC == roI3spqORKae(ES5oEprVxulp(b'\xdc\x98~\xf8'), chr(5411 - 5311) + chr(0b1001001 + 0o34) + chr(0b1011110 + 0o5) + '\157' + '\144' + '\x65')(chr(0b1100 + 0o151) + chr(116) + '\x66' + '\055' + '\x38'): ZEosdIbKRns7(GtsVUCYulgYX, Pbl0gxeZ3EHD) elif GjUZflgb7mHC == roI3spqORKae(ES5oEprVxulp(b'\xc2\x8ei\xe2'), chr(0b1000101 + 0o37) + chr(0b1100101) + chr(99) + chr(111) + chr(0b1100100) + '\x65')('\165' + chr(0b10011 + 0o141) + chr(3835 - 3733) + '\055' + chr(0b110000 + 0o10)): LrPvI8i9wkXQ(GtsVUCYulgYX, Pbl0gxeZ3EHD) else: vfDpY5VQcwTS = hXMPsSrOQzbh._formats[SLVB2BPA_mIe].GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b'\xdb\x9cp\xe9'), '\144' + '\x65' + '\143' + chr(0b110001 + 0o76) + chr(0b11011 + 0o111) + chr(101))(chr(5411 - 5294) + '\x74' + chr(0b101111 + 0o67) + '\055' + chr(1370 - 1314)), None) if vfDpY5VQcwTS is None: raise Awc2QmWaiVq8(roI3spqORKae(ES5oEprVxulp(b'\xfc\x95c\xacY\xfc\xf0e\xab\xf8F\x97\xc9\x85k\xfdW\x99\x87\x8dle\xa6\xa6\x0c\x08\x18\xb4\x95\x14\xccp\x99\xab\xdfk\xcca\xbaZ\xc7\x9cb\xa3L\xf2\xf4m\xea\xea\x13\x94\xdf\x82v\xb2]\x8f\xca'), '\x64' + chr(8828 - 8727) + '\x63' + '\157' + chr(0b11101 + 0o107) + chr(101))('\x75' + chr(116) + chr(0b1001111 + 0o27) + chr(0b10011 + 0o32) + chr(0b110010 + 0o6))) if roI3spqORKae(HZiF2fh8hyim, roI3spqORKae(ES5oEprVxulp(b'\xd2\xaeO\xf5Q\xc3\xf7M\xbc\xe07\xce'), chr(0b1100100) + '\x65' + '\143' + chr(111) + chr(100) + '\145')('\x75' + chr(0b110 + 0o156) + chr(0b110001 + 0o65) + '\055' + chr(323 - 267)))(GtsVUCYulgYX) and (not JewFVgkSGnBd): v8jsMqaYV6U2(roI3spqORKae(ES5oEprVxulp(b'\xfc\x95c\xacY\xfa\xeem\xea\xed\n\x88\xd9\x97{\xa4\x13\x99\x9c\x88~c\xb0\xaaMX\x12\xb8\x98\x02\x89$\x95\xa8\xdfk\xcce\xffD\xdf\x8fo\xf8Z\xae\xd6z\xbf\xe9H'), chr(0b1100100) + chr(1941 - 1840) + chr(2575 - 2476) + chr(0b1101111) + chr(0b110111 + 0o55) + chr(0b111001 + 0o54))(chr(117) + chr(12757 - 12641) + chr(0b1100110) + chr(1664 - 1619) + chr(56))) return vfDpY5VQcwTS(GtsVUCYulgYX, Pbl0gxeZ3EHD)
rossant/ipymd
ipymd/core/format_manager.py
FormatManager.create_reader
def create_reader(self, name, *args, **kwargs): """Create a new reader instance for a given format.""" self._check_format(name) return self._formats[name]['reader'](*args, **kwargs)
python
def create_reader(self, name, *args, **kwargs): """Create a new reader instance for a given format.""" self._check_format(name) return self._formats[name]['reader'](*args, **kwargs)
[ "def", "create_reader", "(", "self", ",", "name", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "self", ".", "_check_format", "(", "name", ")", "return", "self", ".", "_formats", "[", "name", "]", "[", "'reader'", "]", "(", "*", "args", ",", "*", "*", "kwargs", ")" ]
Create a new reader instance for a given format.
[ "Create", "a", "new", "reader", "instance", "for", "a", "given", "format", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L203-L206
train
Create a new reader instance for a given format.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b100101 + 0o15) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(646 - 598) + '\157' + chr(0b110011 + 0o0) + chr(0b110100) + chr(1011 - 959), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(440 - 390) + chr(0b110111) + chr(0b11111 + 0o23), 0b1000), nzTpIcepk0o8(chr(196 - 148) + chr(111) + chr(49) + '\064', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1001000 + 0o47) + '\x31' + '\065' + chr(887 - 833), 32611 - 32603), nzTpIcepk0o8('\060' + '\157' + '\061' + chr(827 - 779) + '\067', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + '\x33' + chr(0b1011 + 0o45) + '\064', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + chr(0b10001 + 0o41), 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(0b110001) + chr(55), 0b1000), nzTpIcepk0o8(chr(48) + chr(6855 - 6744) + chr(991 - 938) + chr(1516 - 1465), 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110010) + chr(0b110110) + chr(2657 - 2604), 22911 - 22903), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b11 + 0o60) + '\x37' + chr(128 - 78), 0b1000), nzTpIcepk0o8(chr(1211 - 1163) + '\157' + '\062' + '\063' + chr(53), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b10110 + 0o33) + '\x37' + chr(0b110100), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + '\062' + chr(1108 - 1060) + '\063', ord("\x08")), nzTpIcepk0o8(chr(84 - 36) + '\x6f' + '\x31' + chr(0b110111) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(923 - 873) + chr(1182 - 1129) + chr(127 - 73), 0o10), nzTpIcepk0o8(chr(0b10010 + 0o36) + chr(0b1101111) + '\064' + chr(829 - 780), 0b1000), nzTpIcepk0o8(chr(1144 - 1096) + chr(0b1101111) + chr(0b10001 + 0o42) + chr(0b110110) + chr(0b100000 + 0o20), 53269 - 53261), nzTpIcepk0o8('\x30' + chr(111) + chr(0b1101 + 0o47) + chr(2623 - 2571), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x36', ord("\x08")), nzTpIcepk0o8(chr(1381 - 1333) + chr(0b1101111) + '\063' + chr(2054 - 2003) + '\x32', 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b11 + 0o60) + '\060', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110011) + chr(0b11101 + 0o32), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(1310 - 1199) + '\063' + '\062' + chr(0b110110), 22432 - 22424), nzTpIcepk0o8(chr(48) + chr(0b100000 + 0o117) + '\x32' + chr(941 - 890) + chr(0b110010), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + '\063' + chr(0b110000 + 0o5), 45749 - 45741), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(2253 - 2203) + chr(478 - 430) + chr(0b101000 + 0o15), 0o10), nzTpIcepk0o8(chr(0b100 + 0o54) + '\157' + chr(0b110011) + chr(0b100001 + 0o23), 9081 - 9073), nzTpIcepk0o8(chr(2270 - 2222) + '\x6f' + chr(2315 - 2264) + chr(48) + '\061', 0o10), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b101110 + 0o5) + '\x31' + '\x30', 0b1000), nzTpIcepk0o8('\060' + chr(9495 - 9384) + '\062' + chr(1607 - 1555) + chr(0b110101), ord("\x08")), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b111100 + 0o63) + '\062' + chr(0b11111 + 0o26), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(11516 - 11405) + chr(496 - 445) + '\x36' + '\066', ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\x33' + chr(0b110011) + chr(0b101000 + 0o17), 0b1000), nzTpIcepk0o8(chr(48) + chr(3090 - 2979) + '\x33' + chr(0b110000) + '\061', 8), nzTpIcepk0o8(chr(81 - 33) + chr(0b1000 + 0o147) + '\062' + '\x36' + chr(0b1011 + 0o46), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(2273 - 2222) + chr(48) + chr(0b1001 + 0o51), 0o10), nzTpIcepk0o8('\x30' + chr(0b1001110 + 0o41) + '\x36' + chr(55), 0b1000), nzTpIcepk0o8('\060' + '\157' + '\063' + '\x34' + chr(1296 - 1242), 53675 - 53667)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(0b1001011 + 0o44) + chr(0b100100 + 0o21) + chr(0b110000), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b':'), chr(0b1100100) + chr(9564 - 9463) + chr(0b1000101 + 0o36) + chr(0b1011111 + 0o20) + chr(5063 - 4963) + chr(2178 - 2077))(chr(0b1011 + 0o152) + chr(116) + chr(2660 - 2558) + '\055' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def mNY_NMtXq1eP(hXMPsSrOQzbh, SLVB2BPA_mIe, *eemPYp2vtTSr, **q5n0sHDDTy90): roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'K\x87\xd2i\r,\x9bl`Y\xd8\x9b\xe9'), '\144' + '\145' + '\x63' + '\157' + chr(100) + '\145')('\x75' + '\164' + chr(0b1100110) + '\x2d' + chr(0b11001 + 0o37)))(SLVB2BPA_mIe) return roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'm\xa6\xd5@\x1f3\x80EKr\xd7\xb2'), chr(0b1100000 + 0o4) + chr(101) + chr(0b1010100 + 0o17) + '\x6f' + '\x64' + chr(1467 - 1366))(chr(152 - 35) + chr(0b1100101 + 0o17) + chr(9429 - 9327) + chr(462 - 417) + '\070'))[SLVB2BPA_mIe][roI3spqORKae(ES5oEprVxulp(b'f\x81\xdbh\x0b5'), chr(9253 - 9153) + chr(0b1100101) + '\143' + chr(1543 - 1432) + '\144' + chr(6336 - 6235))('\165' + chr(0b101110 + 0o106) + chr(102) + chr(0b11010 + 0o23) + chr(0b11110 + 0o32))](*eemPYp2vtTSr, **q5n0sHDDTy90)
rossant/ipymd
ipymd/core/format_manager.py
FormatManager.create_writer
def create_writer(self, name, *args, **kwargs): """Create a new writer instance for a given format.""" self._check_format(name) return self._formats[name]['writer'](*args, **kwargs)
python
def create_writer(self, name, *args, **kwargs): """Create a new writer instance for a given format.""" self._check_format(name) return self._formats[name]['writer'](*args, **kwargs)
[ "def", "create_writer", "(", "self", ",", "name", ",", "*", "args", ",", "*", "*", "kwargs", ")", ":", "self", ".", "_check_format", "(", "name", ")", "return", "self", ".", "_formats", "[", "name", "]", "[", "'writer'", "]", "(", "*", "args", ",", "*", "*", "kwargs", ")" ]
Create a new writer instance for a given format.
[ "Create", "a", "new", "writer", "instance", "for", "a", "given", "format", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L208-L211
train
Create a new writer instance for a given format.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(1255 - 1144) + '\067', 0b1000), nzTpIcepk0o8(chr(48) + chr(7767 - 7656) + chr(544 - 494) + chr(51) + chr(48), ord("\x08")), nzTpIcepk0o8(chr(1404 - 1356) + '\x6f' + chr(49) + chr(48) + chr(190 - 142), ord("\x08")), nzTpIcepk0o8(chr(0b100100 + 0o14) + chr(111) + chr(53) + '\x36', 36383 - 36375), nzTpIcepk0o8(chr(560 - 512) + chr(390 - 279) + chr(49) + '\067' + chr(0b100101 + 0o21), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1000001 + 0o56) + chr(50) + chr(953 - 904) + '\061', 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(51) + chr(1608 - 1560) + chr(0b11011 + 0o26), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b11000 + 0o127) + chr(0b100101 + 0o16) + chr(1109 - 1057) + chr(0b11010 + 0o26), 42157 - 42149), nzTpIcepk0o8('\060' + chr(0b1101011 + 0o4) + '\063' + chr(54) + chr(0b110101), 0b1000), nzTpIcepk0o8('\060' + chr(8351 - 8240) + '\x32' + '\x34' + chr(0b100010 + 0o25), 0o10), nzTpIcepk0o8(chr(0b11100 + 0o24) + chr(111) + chr(0b110010) + '\x36', 4697 - 4689), nzTpIcepk0o8(chr(0b101010 + 0o6) + '\x6f' + '\x32' + '\x32' + '\x35', 0b1000), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b1001011 + 0o44) + chr(0b10110 + 0o33) + '\062' + '\x31', 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + '\x32' + chr(1460 - 1407) + '\067', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b110110 + 0o71) + chr(50) + '\x33' + chr(48), 8), nzTpIcepk0o8(chr(48) + chr(0b100110 + 0o111) + chr(167 - 117) + chr(54) + '\x35', 0b1000), nzTpIcepk0o8(chr(1238 - 1190) + chr(0b1100 + 0o143) + chr(901 - 851) + chr(1235 - 1184) + chr(0b110101), 60420 - 60412), nzTpIcepk0o8(chr(405 - 357) + '\157' + chr(0b110010) + chr(48) + '\x37', 8737 - 8729), nzTpIcepk0o8('\x30' + chr(11075 - 10964) + '\063' + '\x31' + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110011) + chr(790 - 739) + '\064', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110010) + chr(55) + '\062', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110001 + 0o0) + '\x37' + chr(0b110010), ord("\x08")), nzTpIcepk0o8(chr(1879 - 1831) + '\157' + chr(1508 - 1458) + chr(215 - 160) + chr(0b110010), 8), nzTpIcepk0o8('\060' + chr(10633 - 10522) + '\x34' + chr(327 - 278), 26394 - 26386), nzTpIcepk0o8('\x30' + '\157' + '\061' + '\066' + '\063', 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(1944 - 1890) + chr(0b110011), 28081 - 28073), nzTpIcepk0o8('\x30' + chr(11771 - 11660) + chr(1087 - 1036) + chr(0b101011 + 0o7) + chr(0b10110 + 0o37), ord("\x08")), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(111) + '\x32' + chr(49) + chr(48), 9146 - 9138), nzTpIcepk0o8('\060' + chr(111) + chr(261 - 211) + chr(0b110111) + chr(51), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(4734 - 4623) + '\x31' + '\060' + chr(52), 0b1000), nzTpIcepk0o8(chr(0b1101 + 0o43) + '\x6f' + chr(0b1011 + 0o50) + chr(0b0 + 0o67) + '\062', 0b1000), nzTpIcepk0o8(chr(1261 - 1213) + chr(5768 - 5657) + chr(0b110010) + chr(0b1011 + 0o54) + '\x32', 8), nzTpIcepk0o8('\x30' + chr(111) + chr(50) + '\x30' + chr(0b110001), 1474 - 1466), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x33' + chr(54) + '\x31', 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(0b110001) + '\066' + chr(0b110111), 0o10), nzTpIcepk0o8('\060' + chr(1273 - 1162) + '\x31' + '\067' + '\063', 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(1934 - 1883) + chr(0b110101) + '\061', 0o10), nzTpIcepk0o8(chr(1253 - 1205) + chr(111) + chr(663 - 611) + chr(51), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(1077 - 1028) + '\067' + chr(0b110000), ord("\x08")), nzTpIcepk0o8(chr(1939 - 1891) + chr(0b1101111) + chr(1332 - 1281) + '\x35' + '\x30', 0b1000)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b101000 + 0o10) + '\x6f' + chr(0b110101) + chr(0b100100 + 0o14), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b')'), chr(0b1100 + 0o130) + chr(1172 - 1071) + chr(3841 - 3742) + chr(111) + '\x64' + chr(101))('\x75' + '\164' + chr(0b1100110) + chr(45) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def KFZCLYI5z3UZ(hXMPsSrOQzbh, SLVB2BPA_mIe, *eemPYp2vtTSr, **q5n0sHDDTy90): roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'X\xfb(K\x1d\xe2\x9e\x86\x9a\xd5{\xf4%'), chr(100) + chr(101) + '\x63' + chr(4276 - 4165) + chr(100) + chr(0b1001100 + 0o31))('\x75' + '\164' + chr(2711 - 2609) + '\055' + chr(0b0 + 0o70)))(SLVB2BPA_mIe) return roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'~\xda/b\x0f\xfd\x85\xaf\xb1\xfet\xdd'), chr(0b10 + 0o142) + chr(0b1100101) + '\x63' + chr(0b1010001 + 0o36) + chr(100) + chr(5957 - 5856))(chr(0b1110101) + chr(0b1000010 + 0o62) + chr(102) + chr(0b101101) + chr(1765 - 1709)))[SLVB2BPA_mIe][roI3spqORKae(ES5oEprVxulp(b'p\xea)Z\x1b\xfb'), chr(0b1100100) + chr(0b1001011 + 0o32) + chr(7158 - 7059) + chr(0b1101111) + chr(100) + '\145')(chr(117) + '\x74' + chr(102) + '\x2d' + chr(0b100 + 0o64))](*eemPYp2vtTSr, **q5n0sHDDTy90)
rossant/ipymd
ipymd/core/format_manager.py
FormatManager.convert
def convert(self, contents_or_path, from_=None, to=None, reader=None, writer=None, from_kwargs=None, to_kwargs=None, ): """Convert contents between supported formats. Parameters ---------- contents : str The contents to convert from. from_ : str or None The name of the source format. If None, this is the ipymd_cells format. to : str or None The name of the target format. If None, this is the ipymd_cells format. reader : a Reader instance or None writer : a Writer instance or None from_kwargs : dict Optional keyword arguments to pass to the reader instance. to_kwargs : dict Optional keyword arguments to pass to the writer instance. """ # Load the file if 'contents_or_path' is a path. if _is_path(contents_or_path): contents = self.load(contents_or_path, from_) else: contents = contents_or_path if from_kwargs is None: from_kwargs = {} if to_kwargs is None: to_kwargs = {} if reader is None: reader = (self.create_reader(from_, **from_kwargs) if from_ is not None else None) if writer is None: writer = (self.create_writer(to, **to_kwargs) if to is not None else None) if reader is not None: # Convert from the source format to ipymd cells. cells = [cell for cell in reader.read(contents)] else: # If no reader is specified, 'contents' is assumed to already be # a list of ipymd cells. cells = contents notebook_metadata = [cell for cell in cells if cell["cell_type"] == "notebook_metadata"] if writer is not None: if notebook_metadata: [cells.remove(cell) for cell in notebook_metadata] notebook_metadata = self.clean_meta( notebook_metadata[0]["metadata"] ) if hasattr(writer, "write_notebook_metadata"): writer.write_notebook_metadata(notebook_metadata) else: print("{} does not support notebook metadata, " "dropping metadata: {}".format( writer, notebook_metadata)) # Convert from ipymd cells to the target format. for cell in cells: meta = self.clean_cell_meta(cell.get("metadata", {})) if not meta: cell.pop("metadata", None) writer.write(cell) return writer.contents else: # If no writer is specified, the output is supposed to be # a list of ipymd cells. return cells
python
def convert(self, contents_or_path, from_=None, to=None, reader=None, writer=None, from_kwargs=None, to_kwargs=None, ): """Convert contents between supported formats. Parameters ---------- contents : str The contents to convert from. from_ : str or None The name of the source format. If None, this is the ipymd_cells format. to : str or None The name of the target format. If None, this is the ipymd_cells format. reader : a Reader instance or None writer : a Writer instance or None from_kwargs : dict Optional keyword arguments to pass to the reader instance. to_kwargs : dict Optional keyword arguments to pass to the writer instance. """ # Load the file if 'contents_or_path' is a path. if _is_path(contents_or_path): contents = self.load(contents_or_path, from_) else: contents = contents_or_path if from_kwargs is None: from_kwargs = {} if to_kwargs is None: to_kwargs = {} if reader is None: reader = (self.create_reader(from_, **from_kwargs) if from_ is not None else None) if writer is None: writer = (self.create_writer(to, **to_kwargs) if to is not None else None) if reader is not None: # Convert from the source format to ipymd cells. cells = [cell for cell in reader.read(contents)] else: # If no reader is specified, 'contents' is assumed to already be # a list of ipymd cells. cells = contents notebook_metadata = [cell for cell in cells if cell["cell_type"] == "notebook_metadata"] if writer is not None: if notebook_metadata: [cells.remove(cell) for cell in notebook_metadata] notebook_metadata = self.clean_meta( notebook_metadata[0]["metadata"] ) if hasattr(writer, "write_notebook_metadata"): writer.write_notebook_metadata(notebook_metadata) else: print("{} does not support notebook metadata, " "dropping metadata: {}".format( writer, notebook_metadata)) # Convert from ipymd cells to the target format. for cell in cells: meta = self.clean_cell_meta(cell.get("metadata", {})) if not meta: cell.pop("metadata", None) writer.write(cell) return writer.contents else: # If no writer is specified, the output is supposed to be # a list of ipymd cells. return cells
[ "def", "convert", "(", "self", ",", "contents_or_path", ",", "from_", "=", "None", ",", "to", "=", "None", ",", "reader", "=", "None", ",", "writer", "=", "None", ",", "from_kwargs", "=", "None", ",", "to_kwargs", "=", "None", ",", ")", ":", "# Load the file if 'contents_or_path' is a path.", "if", "_is_path", "(", "contents_or_path", ")", ":", "contents", "=", "self", ".", "load", "(", "contents_or_path", ",", "from_", ")", "else", ":", "contents", "=", "contents_or_path", "if", "from_kwargs", "is", "None", ":", "from_kwargs", "=", "{", "}", "if", "to_kwargs", "is", "None", ":", "to_kwargs", "=", "{", "}", "if", "reader", "is", "None", ":", "reader", "=", "(", "self", ".", "create_reader", "(", "from_", ",", "*", "*", "from_kwargs", ")", "if", "from_", "is", "not", "None", "else", "None", ")", "if", "writer", "is", "None", ":", "writer", "=", "(", "self", ".", "create_writer", "(", "to", ",", "*", "*", "to_kwargs", ")", "if", "to", "is", "not", "None", "else", "None", ")", "if", "reader", "is", "not", "None", ":", "# Convert from the source format to ipymd cells.", "cells", "=", "[", "cell", "for", "cell", "in", "reader", ".", "read", "(", "contents", ")", "]", "else", ":", "# If no reader is specified, 'contents' is assumed to already be", "# a list of ipymd cells.", "cells", "=", "contents", "notebook_metadata", "=", "[", "cell", "for", "cell", "in", "cells", "if", "cell", "[", "\"cell_type\"", "]", "==", "\"notebook_metadata\"", "]", "if", "writer", "is", "not", "None", ":", "if", "notebook_metadata", ":", "[", "cells", ".", "remove", "(", "cell", ")", "for", "cell", "in", "notebook_metadata", "]", "notebook_metadata", "=", "self", ".", "clean_meta", "(", "notebook_metadata", "[", "0", "]", "[", "\"metadata\"", "]", ")", "if", "hasattr", "(", "writer", ",", "\"write_notebook_metadata\"", ")", ":", "writer", ".", "write_notebook_metadata", "(", "notebook_metadata", ")", "else", ":", "print", "(", "\"{} does not support notebook metadata, \"", "\"dropping metadata: {}\"", ".", "format", "(", "writer", ",", "notebook_metadata", ")", ")", "# Convert from ipymd cells to the target format.", "for", "cell", "in", "cells", ":", "meta", "=", "self", ".", "clean_cell_meta", "(", "cell", ".", "get", "(", "\"metadata\"", ",", "{", "}", ")", ")", "if", "not", "meta", ":", "cell", ".", "pop", "(", "\"metadata\"", ",", "None", ")", "writer", ".", "write", "(", "cell", ")", "return", "writer", ".", "contents", "else", ":", "# If no writer is specified, the output is supposed to be", "# a list of ipymd cells.", "return", "cells" ]
Convert contents between supported formats. Parameters ---------- contents : str The contents to convert from. from_ : str or None The name of the source format. If None, this is the ipymd_cells format. to : str or None The name of the target format. If None, this is the ipymd_cells format. reader : a Reader instance or None writer : a Writer instance or None from_kwargs : dict Optional keyword arguments to pass to the reader instance. to_kwargs : dict Optional keyword arguments to pass to the writer instance.
[ "Convert", "contents", "between", "supported", "formats", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L213-L299
train
Convert contents between the ipymd cells and the notebook metadata.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + '\157' + chr(0b101010 + 0o13) + chr(0b110011), ord("\x08")), nzTpIcepk0o8(chr(0b100 + 0o54) + '\157' + '\062' + '\x36' + chr(0b10 + 0o61), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(49) + '\x31' + chr(2528 - 2474), 0b1000), nzTpIcepk0o8(chr(1268 - 1220) + chr(0b1101111) + chr(0b110100) + '\060', 16713 - 16705), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(1227 - 1177) + '\067' + '\065', 0b1000), nzTpIcepk0o8(chr(1910 - 1862) + chr(0b1101111) + '\x31' + chr(0b110001) + chr(0b11010 + 0o26), 0b1000), nzTpIcepk0o8(chr(633 - 585) + '\157' + chr(1782 - 1732) + chr(54) + chr(1608 - 1554), ord("\x08")), nzTpIcepk0o8('\060' + chr(11560 - 11449) + chr(0b11011 + 0o27) + '\065' + '\061', 323 - 315), nzTpIcepk0o8(chr(0b110000) + chr(3713 - 3602) + chr(1393 - 1344) + '\x33' + chr(0b101110 + 0o4), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x31' + chr(2305 - 2256) + chr(287 - 234), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(51) + '\x33' + '\066', 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(2548 - 2497) + chr(0b110100) + chr(0b110110), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(50) + chr(1861 - 1811) + '\x35', 45915 - 45907), nzTpIcepk0o8('\060' + chr(111) + chr(1527 - 1474) + '\x30', 26031 - 26023), nzTpIcepk0o8('\x30' + chr(111) + '\066' + '\061', 15879 - 15871), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b10 + 0o60) + '\x34' + chr(0b101111 + 0o1), 17833 - 17825), nzTpIcepk0o8(chr(0b101101 + 0o3) + chr(111) + '\061' + '\x34' + chr(0b110001 + 0o2), 15803 - 15795), nzTpIcepk0o8(chr(500 - 452) + chr(111) + chr(0b100110 + 0o15) + chr(54) + '\066', 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x31' + '\065' + chr(54), 0o10), nzTpIcepk0o8('\060' + '\157' + chr(0b1110 + 0o45) + chr(0b10001 + 0o44) + chr(0b100110 + 0o15), 0o10), nzTpIcepk0o8('\060' + chr(1392 - 1281) + chr(0b100 + 0o63) + chr(1030 - 977), 0b1000), nzTpIcepk0o8(chr(48) + chr(12210 - 12099) + '\x33' + chr(53) + chr(49), 0o10), nzTpIcepk0o8(chr(0b100100 + 0o14) + '\157' + chr(50) + '\x34' + chr(54), 15570 - 15562), nzTpIcepk0o8('\x30' + '\x6f' + '\x33' + chr(2015 - 1961) + chr(0b11010 + 0o34), 8), nzTpIcepk0o8(chr(1003 - 955) + chr(6103 - 5992) + chr(0b110010) + '\064' + chr(0b110000), 8), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(718 - 668) + chr(0b1100 + 0o45) + chr(0b101011 + 0o5), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b101000 + 0o12) + '\061' + chr(2218 - 2166), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(1829 - 1774) + chr(756 - 705), ord("\x08")), nzTpIcepk0o8(chr(0b11010 + 0o26) + '\157' + chr(2466 - 2414) + '\062', 27859 - 27851), nzTpIcepk0o8(chr(0b100011 + 0o15) + '\x6f' + chr(0b110011) + chr(0b110100) + chr(0b11 + 0o55), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1010010 + 0o35) + chr(0b110011) + '\063' + '\x31', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\063' + '\x37' + '\x35', 2452 - 2444), nzTpIcepk0o8(chr(1671 - 1623) + chr(0b1101111) + '\063' + '\067' + '\x31', 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(52) + chr(0b101000 + 0o14), 59387 - 59379), nzTpIcepk0o8('\060' + chr(11860 - 11749) + '\063' + '\x37' + chr(49), 8), nzTpIcepk0o8('\x30' + '\157' + chr(0b110011) + chr(0b100 + 0o61), 21711 - 21703), nzTpIcepk0o8('\x30' + chr(111) + chr(50) + chr(0b110000) + '\x32', 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b11000 + 0o31) + chr(55) + chr(2877 - 2822), 35823 - 35815), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(627 - 576) + '\060' + chr(2645 - 2592), 0o10), nzTpIcepk0o8(chr(48) + chr(4047 - 3936) + chr(0b110011) + '\x36', ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + chr(0b1001110 + 0o41) + '\x35' + chr(0b110000), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x05'), chr(0b1010001 + 0o23) + chr(0b1100101) + chr(99) + chr(0b101001 + 0o106) + chr(100) + chr(286 - 185))(chr(0b1010110 + 0o37) + '\164' + chr(0b1101 + 0o131) + chr(0b11010 + 0o23) + chr(781 - 725)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Ke7SAGs_qhbe(hXMPsSrOQzbh, n7F2mEtRNQFa, VLhQm2k0NUWH=None, XH6QLZDN5K8C=None, kWvgahJQKTiF=None, OobcaiV2mshj=None, Rp5uXLPx3nN3=None, Ug68wc9CWUGe=None): if TVH9mixANqEE(n7F2mEtRNQFa): Pbl0gxeZ3EHD = hXMPsSrOQzbh.ZERsdc7c1d8E(n7F2mEtRNQFa, VLhQm2k0NUWH) else: Pbl0gxeZ3EHD = n7F2mEtRNQFa if Rp5uXLPx3nN3 is None: Rp5uXLPx3nN3 = {} if Ug68wc9CWUGe is None: Ug68wc9CWUGe = {} if kWvgahJQKTiF is None: kWvgahJQKTiF = hXMPsSrOQzbh.create_reader(VLhQm2k0NUWH, **Rp5uXLPx3nN3) if VLhQm2k0NUWH is not None else None if OobcaiV2mshj is None: OobcaiV2mshj = hXMPsSrOQzbh.create_writer(XH6QLZDN5K8C, **Ug68wc9CWUGe) if XH6QLZDN5K8C is not None else None if kWvgahJQKTiF is not None: trF8n6dR_a1E = [rbRF4PDvaTGt for rbRF4PDvaTGt in kWvgahJQKTiF.eoXknH7XUn7m(Pbl0gxeZ3EHD)] else: trF8n6dR_a1E = Pbl0gxeZ3EHD xkW1IUSNIkEK = [rbRF4PDvaTGt for rbRF4PDvaTGt in trF8n6dR_a1E if rbRF4PDvaTGt[roI3spqORKae(ES5oEprVxulp(b'H\xd6"L\xe2<\xcf\xd9?'), chr(1516 - 1416) + '\x65' + chr(99) + chr(1536 - 1425) + '\x64' + chr(0b1100101))(chr(117) + '\164' + chr(102) + chr(1916 - 1871) + '\070')] == roI3spqORKae(ES5oEprVxulp(b"E\xdc:E\xdf'\xd9\xc2\x05 \xbb\x92\xf4LP\xd4\x02"), chr(0b1011011 + 0o11) + chr(0b1100101) + chr(99) + chr(4600 - 4489) + chr(1412 - 1312) + chr(101))(chr(2943 - 2826) + chr(1174 - 1058) + chr(102) + chr(0b101101) + chr(0b101000 + 0o20))] if OobcaiV2mshj is not None: if xkW1IUSNIkEK: [roI3spqORKae(trF8n6dR_a1E, roI3spqORKae(ES5oEprVxulp(b'[\xfe"u\xd5,\x84\xe37\x06\x9f\xa3'), '\x64' + chr(0b1100101) + '\143' + chr(111) + '\x64' + chr(0b11011 + 0o112))(chr(0b1010001 + 0o44) + chr(0b1111 + 0o145) + '\x66' + chr(0b11 + 0o52) + chr(56)))(rbRF4PDvaTGt) for rbRF4PDvaTGt in xkW1IUSNIkEK] xkW1IUSNIkEK = hXMPsSrOQzbh.clean_meta(xkW1IUSNIkEK[nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110000), 24403 - 24395)][roI3spqORKae(ES5oEprVxulp(b'F\xd6:A\xd9)\xc2\xc8'), chr(0b1100100) + chr(0b11011 + 0o112) + '\143' + chr(111) + '\144' + '\145')(chr(0b100010 + 0o123) + chr(1850 - 1734) + chr(1054 - 952) + chr(45) + chr(0b111000))]) if dRKdVnHPFq7C(OobcaiV2mshj, roI3spqORKae(ES5oEprVxulp(b"\\\xc1'T\xd8\x17\xd8\xc6.(\xbc\x89\xfaCn\xcd\x06\x82\x0f\x8f\\\x9d\xc7"), chr(0b110011 + 0o61) + '\145' + chr(99) + '\157' + '\x64' + '\x65')(chr(0b1110101) + chr(0b1110100) + chr(7136 - 7034) + '\x2d' + '\x38')): roI3spqORKae(OobcaiV2mshj, roI3spqORKae(ES5oEprVxulp(b"\\\xc1'T\xd8\x17\xd8\xc6.(\xbc\x89\xfaCn\xcd\x06\x82\x0f\x8f\\\x9d\xc7"), chr(100) + chr(0b1100101) + chr(99) + chr(10795 - 10684) + '\144' + chr(101))(chr(5947 - 5830) + '\164' + chr(0b1100110) + '\x2d' + '\x38'))(xkW1IUSNIkEK) else: v8jsMqaYV6U2(roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'P\xcenD\xd2-\xc5\x894"\xaa\xc6\xe6]A\xd0\x0c\x84\x1a\xcbS\x86\xd2\x93\xc2\xe7\xe3P\x02\x8d\xbc\x89\x98@\x98i\xe3S\xe5zY\xdc>P\xd4&\xd1\x897(\xaa\x87\xf1IE\xc1Y\xd6\x15\x96'), chr(0b1100010 + 0o2) + chr(0b1100101) + chr(99) + chr(5298 - 5187) + chr(100) + chr(0b1100101))(chr(3005 - 2888) + '\x74' + chr(0b101000 + 0o76) + '\055' + chr(56)), roI3spqORKae(ES5oEprVxulp(b'Z\x80}k\xfa{\xd0\xc6\x0b\x12\x9d\xac'), '\x64' + chr(8052 - 7951) + chr(1918 - 1819) + '\157' + chr(9133 - 9033) + chr(0b1100101))(chr(0b1110101) + chr(0b111001 + 0o73) + chr(0b1100110) + '\x2d' + '\x38'))(OobcaiV2mshj, xkW1IUSNIkEK)) for rbRF4PDvaTGt in trF8n6dR_a1E: DCKHhI6xLX9g = hXMPsSrOQzbh.clean_cell_meta(rbRF4PDvaTGt.GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b'F\xd6:A\xd9)\xc2\xc8'), chr(100) + '\x65' + chr(0b1100011) + chr(3474 - 3363) + chr(100) + chr(101))('\165' + chr(0b1000010 + 0o62) + '\x66' + chr(0b101101) + chr(2270 - 2214)), {})) if not DCKHhI6xLX9g: roI3spqORKae(rbRF4PDvaTGt, roI3spqORKae(ES5oEprVxulp(b'^\xf0\x11y\xd21\xd4\xd1m\x07\xee\xaf'), chr(0b101001 + 0o73) + chr(0b1100101) + chr(0b1001001 + 0o32) + chr(5251 - 5140) + chr(0b11000 + 0o114) + chr(101))(chr(8760 - 8643) + chr(0b1011011 + 0o31) + chr(102) + chr(0b100001 + 0o14) + chr(543 - 487)))(roI3spqORKae(ES5oEprVxulp(b'F\xd6:A\xd9)\xc2\xc8'), '\144' + chr(101) + chr(2968 - 2869) + chr(111) + '\x64' + chr(0b1100101))(chr(0b10010 + 0o143) + '\164' + chr(0b1100110) + '\055' + chr(56)), None) roI3spqORKae(OobcaiV2mshj, roI3spqORKae(ES5oEprVxulp(b'F\xdf~H\xd58\xc0\x98\x16=\xaf\xd4'), chr(100) + chr(0b111000 + 0o55) + '\143' + chr(0b10000 + 0o137) + chr(5269 - 5169) + '\x65')(chr(0b1 + 0o164) + '\x74' + chr(0b100001 + 0o105) + chr(45) + chr(1841 - 1785)))(rbRF4PDvaTGt) return roI3spqORKae(OobcaiV2mshj, roI3spqORKae(ES5oEprVxulp(b'{\xd1"\x10\xda0\xd3\xf3i\x08\x96\xa2'), chr(100) + chr(0b1011010 + 0o13) + chr(0b1011100 + 0o7) + '\157' + chr(0b1100100) + chr(0b1101 + 0o130))('\x75' + chr(116) + chr(102) + chr(45) + chr(0b111000))) else: return trF8n6dR_a1E
rossant/ipymd
ipymd/core/format_manager.py
FormatManager.clean_meta
def clean_meta(self, meta): """Removes unwanted metadata Parameters ---------- meta : dict Notebook metadata. """ if not self.verbose_metadata: default_kernel_name = (self.default_kernel_name or self._km.kernel_name) if (meta.get("kernelspec", {}) .get("name", None) == default_kernel_name): del meta["kernelspec"] meta.pop("language_info", None) return meta
python
def clean_meta(self, meta): """Removes unwanted metadata Parameters ---------- meta : dict Notebook metadata. """ if not self.verbose_metadata: default_kernel_name = (self.default_kernel_name or self._km.kernel_name) if (meta.get("kernelspec", {}) .get("name", None) == default_kernel_name): del meta["kernelspec"] meta.pop("language_info", None) return meta
[ "def", "clean_meta", "(", "self", ",", "meta", ")", ":", "if", "not", "self", ".", "verbose_metadata", ":", "default_kernel_name", "=", "(", "self", ".", "default_kernel_name", "or", "self", ".", "_km", ".", "kernel_name", ")", "if", "(", "meta", ".", "get", "(", "\"kernelspec\"", ",", "{", "}", ")", ".", "get", "(", "\"name\"", ",", "None", ")", "==", "default_kernel_name", ")", ":", "del", "meta", "[", "\"kernelspec\"", "]", "meta", ".", "pop", "(", "\"language_info\"", ",", "None", ")", "return", "meta" ]
Removes unwanted metadata Parameters ---------- meta : dict Notebook metadata.
[ "Removes", "unwanted", "metadata" ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L301-L319
train
Removes unwanted metadata from the Notebook metadata.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b10011 + 0o35) + '\x6f' + chr(2726 - 2672) + chr(923 - 872), ord("\x08")), nzTpIcepk0o8(chr(0b11001 + 0o27) + '\157' + chr(0b0 + 0o63) + '\060' + '\067', 14751 - 14743), nzTpIcepk0o8(chr(0b1001 + 0o47) + '\157' + chr(49) + '\x35' + '\062', 0o10), nzTpIcepk0o8(chr(2280 - 2232) + chr(111) + '\x33' + chr(0b1011 + 0o54) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b1000 + 0o50) + '\157' + chr(2158 - 2107) + '\x33' + '\061', 39495 - 39487), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + chr(55) + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(0b100111 + 0o11) + '\x6f' + '\063' + chr(0b110110) + chr(50), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(2402 - 2351) + '\062', 17204 - 17196), nzTpIcepk0o8(chr(48) + '\157' + '\063' + '\x33' + chr(54), ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\065', 0b1000), nzTpIcepk0o8(chr(48) + chr(1105 - 994) + '\x32' + '\062' + chr(2077 - 2023), 0o10), nzTpIcepk0o8('\x30' + chr(0b1100101 + 0o12) + chr(54) + chr(0b110011), 8), nzTpIcepk0o8(chr(477 - 429) + chr(0b10110 + 0o131) + chr(0b110000 + 0o1) + chr(0b1110 + 0o51) + '\x30', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(49) + '\061' + chr(0b110111), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110101) + chr(2438 - 2386), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1100111 + 0o10) + '\063' + '\065' + chr(0b110110), 52440 - 52432), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(111) + chr(0b10010 + 0o37) + chr(0b101110 + 0o7) + chr(0b110010), 8), nzTpIcepk0o8(chr(0b11 + 0o55) + chr(0b1101111) + chr(0b110111) + chr(2359 - 2308), 0o10), nzTpIcepk0o8('\x30' + chr(10768 - 10657) + '\x33' + chr(53) + chr(0b110110), 8), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\061' + chr(0b111 + 0o53) + '\061', 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(2782 - 2727), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b11011 + 0o124) + '\064' + '\061', 29804 - 29796), nzTpIcepk0o8('\060' + chr(7592 - 7481) + chr(0b110001) + '\x35', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1001100 + 0o43) + chr(55) + '\062', 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110010) + chr(0b10010 + 0o44) + chr(823 - 769), 62101 - 62093), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x35' + chr(0b10 + 0o62), 8), nzTpIcepk0o8(chr(0b100010 + 0o16) + chr(0b1101111) + chr(50) + chr(53) + '\063', 0b1000), nzTpIcepk0o8(chr(0b11010 + 0o26) + '\x6f' + '\x33' + chr(0b110101) + '\x36', 8), nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(0b1101111) + chr(50) + '\x34' + chr(0b110010), 50816 - 50808), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b101100 + 0o5) + chr(0b100111 + 0o16) + '\x36', 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(1570 - 1519) + chr(0b110011) + '\x30', 0o10), nzTpIcepk0o8('\060' + chr(111) + '\062' + chr(1809 - 1761) + '\x36', 0o10), nzTpIcepk0o8(chr(1314 - 1266) + chr(111) + chr(50) + chr(55) + '\x31', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(1507 - 1458) + '\066' + chr(922 - 873), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110011) + chr(2172 - 2120) + chr(1350 - 1302), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b100000 + 0o22) + '\067' + chr(0b110101), 17199 - 17191), nzTpIcepk0o8('\x30' + chr(111) + chr(49) + chr(0b110101 + 0o0) + chr(50), 8), nzTpIcepk0o8(chr(0b1011 + 0o45) + chr(0b1101100 + 0o3) + '\x32' + chr(0b110100) + '\067', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\x31' + chr(0b110001) + '\x32', 0b1000), nzTpIcepk0o8(chr(0b101001 + 0o7) + chr(5373 - 5262) + '\063' + chr(0b110111) + '\x33', 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + '\157' + '\065' + '\x30', 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x1d'), '\144' + chr(839 - 738) + chr(0b1100011) + chr(5459 - 5348) + chr(100) + '\x65')('\165' + chr(1121 - 1005) + chr(9190 - 9088) + '\x2d' + chr(0b110011 + 0o5)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def yGFncDshgay7(hXMPsSrOQzbh, DCKHhI6xLX9g): if not roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'E\xa2\x18\x9d\xb6\x08\x97E\xb3`\xe2R\x1c.X\x8f'), chr(0b1100100) + '\145' + chr(0b1100011) + chr(0b110 + 0o151) + '\144' + chr(101))(chr(117) + '\x74' + chr(0b1100110) + '\x2d' + chr(0b111000))): PhrA90GWeXwl = hXMPsSrOQzbh.default_kernel_name or hXMPsSrOQzbh._km.kernel_name if roI3spqORKae(DCKHhI6xLX9g.get(roI3spqORKae(ES5oEprVxulp(b'X\xa2\x18\x91\xbc\x17\x81j\xbbf'), chr(0b1100100) + chr(0b1100101) + chr(3774 - 3675) + chr(0b1101111) + chr(2882 - 2782) + chr(0b1100101))(chr(0b1110101) + '\x74' + chr(0b110110 + 0o60) + chr(0b101101) + chr(0b10010 + 0o46)), {}), roI3spqORKae(ES5oEprVxulp(b't\x92!\x9a\xad\x0e\xc6b\xbfB\xe5y'), chr(0b10000 + 0o124) + chr(0b1001110 + 0o27) + chr(99) + '\x6f' + chr(0b1100100) + chr(101))(chr(117) + '\x74' + '\x66' + chr(45) + chr(0b110000 + 0o10)))(roI3spqORKae(ES5oEprVxulp(b']\xa6\x07\x9a'), chr(7825 - 7725) + chr(10192 - 10091) + '\143' + '\157' + '\144' + chr(0b10011 + 0o122))(chr(0b1110101) + '\164' + '\146' + chr(0b101101) + '\070'), None) == PhrA90GWeXwl: del DCKHhI6xLX9g[roI3spqORKae(ES5oEprVxulp(b'X\xa2\x18\x91\xbc\x17\x81j\xbbf'), chr(100) + chr(0b1100101) + chr(0b1100011) + chr(6601 - 6490) + chr(100) + chr(0b110001 + 0o64))('\165' + chr(2665 - 2549) + chr(102) + '\x2d' + '\070')] roI3spqORKae(DCKHhI6xLX9g, roI3spqORKae(ES5oEprVxulp(b'F\x845\xa6\xb6\x02\x90b\xe9O\xa6z'), chr(0b1100100) + chr(0b1100101) + chr(8836 - 8737) + '\x6f' + chr(0b1100100) + chr(101))(chr(117) + chr(0b110 + 0o156) + '\146' + '\x2d' + chr(0b100011 + 0o25)))(roI3spqORKae(ES5oEprVxulp(b'_\xa6\x04\x98\xac\x1a\x95\x7f\x81l\xf8U\x17'), chr(7533 - 7433) + chr(0b1100101) + '\143' + chr(111) + chr(100) + chr(4229 - 4128))(chr(117) + chr(0b1110100) + '\x66' + '\x2d' + chr(1179 - 1123)), None) return DCKHhI6xLX9g
rossant/ipymd
ipymd/core/format_manager.py
FormatManager.clean_cell_meta
def clean_cell_meta(self, meta): """Remove cell metadata that matches the default cell metadata.""" for k, v in DEFAULT_CELL_METADATA.items(): if meta.get(k, None) == v: meta.pop(k, None) return meta
python
def clean_cell_meta(self, meta): """Remove cell metadata that matches the default cell metadata.""" for k, v in DEFAULT_CELL_METADATA.items(): if meta.get(k, None) == v: meta.pop(k, None) return meta
[ "def", "clean_cell_meta", "(", "self", ",", "meta", ")", ":", "for", "k", ",", "v", "in", "DEFAULT_CELL_METADATA", ".", "items", "(", ")", ":", "if", "meta", ".", "get", "(", "k", ",", "None", ")", "==", "v", ":", "meta", ".", "pop", "(", "k", ",", "None", ")", "return", "meta" ]
Remove cell metadata that matches the default cell metadata.
[ "Remove", "cell", "metadata", "that", "matches", "the", "default", "cell", "metadata", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/format_manager.py#L321-L326
train
Remove cell metadata that matches the default cell metadata.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(111) + '\061' + '\064' + chr(0b100011 + 0o16), 0o10), nzTpIcepk0o8('\060' + chr(111) + '\x33' + chr(54) + chr(0b101010 + 0o7), 2596 - 2588), nzTpIcepk0o8(chr(48) + '\x6f' + chr(121 - 71) + '\060' + '\x34', 25412 - 25404), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110110) + '\x30', 0b1000), nzTpIcepk0o8('\060' + chr(2290 - 2179) + chr(0b111 + 0o55) + chr(1643 - 1593), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\x31' + '\x37' + chr(0b110010), 33755 - 33747), nzTpIcepk0o8(chr(1145 - 1097) + '\x6f' + '\x33' + chr(48) + '\x30', 0o10), nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(3326 - 3215) + '\065' + chr(0b110010 + 0o4), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(300 - 251) + chr(53) + chr(0b10 + 0o60), 0o10), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(111) + chr(50) + '\066' + chr(48), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b0 + 0o157) + '\062' + chr(1834 - 1782) + '\067', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110101), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(0b110101) + chr(0b110011), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(0b110011) + chr(484 - 433) + '\x30', 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(0b110010) + chr(48) + chr(0b110001), 0b1000), nzTpIcepk0o8(chr(326 - 278) + chr(0b111111 + 0o60) + chr(0b1001 + 0o51) + '\065' + chr(414 - 365), 44939 - 44931), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110011) + chr(0b110000) + chr(1450 - 1398), 13741 - 13733), nzTpIcepk0o8(chr(0b110000) + chr(12074 - 11963) + '\061' + chr(0b110110) + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\060' + chr(1166 - 1055) + chr(901 - 850) + chr(0b110100) + chr(0b1000 + 0o50), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110011) + chr(0b110101) + chr(54), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110010) + chr(2330 - 2278) + chr(0b110100), 51373 - 51365), nzTpIcepk0o8('\x30' + chr(450 - 339) + '\x32' + chr(0b110010) + chr(1752 - 1704), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110011) + '\065' + chr(51), 0b1000), nzTpIcepk0o8(chr(0b111 + 0o51) + '\x6f' + '\x32' + chr(49) + chr(0b100111 + 0o17), 24922 - 24914), nzTpIcepk0o8(chr(0b110000) + chr(0b11110 + 0o121) + chr(150 - 99) + chr(50) + chr(2575 - 2523), ord("\x08")), nzTpIcepk0o8(chr(1538 - 1490) + chr(0b1101111) + '\063' + '\x35' + '\x36', 8), nzTpIcepk0o8(chr(0b100101 + 0o13) + chr(9849 - 9738) + chr(50) + '\062' + '\063', 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110010) + '\060' + '\063', ord("\x08")), nzTpIcepk0o8(chr(1277 - 1229) + '\157' + '\x33' + chr(1183 - 1134) + chr(0b110011), 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(1408 - 1358) + '\066' + '\067', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x31' + chr(52) + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(1537 - 1489) + chr(0b1101111) + chr(0b110011) + chr(0b110011) + chr(0b110001), 0o10), nzTpIcepk0o8(chr(48) + chr(3308 - 3197) + '\061' + chr(0b110111), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(111) + chr(51) + chr(0b110010) + chr(0b110010), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(0b101111 + 0o5), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b11000 + 0o127) + '\063' + chr(52) + '\067', 63305 - 63297), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\062' + chr(562 - 513), ord("\x08")), nzTpIcepk0o8(chr(2212 - 2164) + chr(0b100001 + 0o116) + chr(0b110011) + chr(0b110101) + chr(0b101111 + 0o3), ord("\x08")), nzTpIcepk0o8(chr(0b10101 + 0o33) + '\x6f' + chr(0b101100 + 0o5) + chr(0b110110) + '\x32', ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(1760 - 1712) + '\x6f' + chr(53) + '\x30', 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'O'), '\x64' + chr(101) + chr(99) + chr(111) + chr(5514 - 5414) + chr(1203 - 1102))('\165' + chr(13433 - 13317) + chr(102) + '\055' + chr(56)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def rz53SIrZPvF9(hXMPsSrOQzbh, DCKHhI6xLX9g): for (B6UAF1zReOyJ, r7AA1pbLjb44) in roI3spqORKae(Ffuk117N0dir, roI3spqORKae(ES5oEprVxulp(b'8\xae\xea~g\x00\x88\x1aY\xc6\xffl'), chr(0b11 + 0o141) + chr(0b1100101) + '\143' + chr(111) + chr(0b1100100) + chr(0b1100101))(chr(117) + chr(6371 - 6255) + '\146' + '\x2d' + chr(56)))(): if roI3spqORKae(DCKHhI6xLX9g, roI3spqORKae(ES5oEprVxulp(b'&\xa4\xcfUV\x0f\xf4V\x0b\xf7\xd4O'), chr(0b1100100) + '\145' + '\143' + '\157' + '\x64' + chr(0b111011 + 0o52))(chr(117) + chr(116) + chr(0b1100110) + chr(0b10011 + 0o32) + chr(2985 - 2929)))(B6UAF1zReOyJ, None) == r7AA1pbLjb44: roI3spqORKae(DCKHhI6xLX9g, roI3spqORKae(ES5oEprVxulp(b'\x14\xb2\xdbiM\x03\xa2V]\xfa\x97L'), '\144' + '\145' + chr(99) + chr(0b1101111) + chr(4238 - 4138) + chr(101))(chr(4510 - 4393) + chr(0b111010 + 0o72) + chr(0b1001011 + 0o33) + chr(45) + '\070'))(B6UAF1zReOyJ, None) return DCKHhI6xLX9g
rossant/ipymd
ipymd/core/prompt.py
_starts_with_regex
def _starts_with_regex(line, regex): """Return whether a line starts with a regex or not.""" if not regex.startswith('^'): regex = '^' + regex reg = re.compile(regex) return reg.match(line)
python
def _starts_with_regex(line, regex): """Return whether a line starts with a regex or not.""" if not regex.startswith('^'): regex = '^' + regex reg = re.compile(regex) return reg.match(line)
[ "def", "_starts_with_regex", "(", "line", ",", "regex", ")", ":", "if", "not", "regex", ".", "startswith", "(", "'^'", ")", ":", "regex", "=", "'^'", "+", "regex", "reg", "=", "re", ".", "compile", "(", "regex", ")", "return", "reg", ".", "match", "(", "line", ")" ]
Return whether a line starts with a regex or not.
[ "Return", "whether", "a", "line", "starts", "with", "a", "regex", "or", "not", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/prompt.py#L37-L42
train
Return whether a line starts with a regex.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + '\157' + chr(0b11000 + 0o31) + '\065' + chr(0b101001 + 0o15), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110010) + chr(54), ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(1376 - 1327) + chr(0b110110) + chr(0b110001), 26574 - 26566), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(50) + '\061', 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\x31' + chr(0b10 + 0o63) + chr(2181 - 2133), 0b1000), nzTpIcepk0o8(chr(1570 - 1522) + chr(4888 - 4777) + chr(2198 - 2149) + '\x31' + chr(0b110111), 48729 - 48721), nzTpIcepk0o8(chr(0b1100 + 0o44) + '\x6f' + chr(0b11111 + 0o30) + '\067', 30602 - 30594), nzTpIcepk0o8('\060' + '\157' + chr(0b110011) + chr(48) + '\x35', 0o10), nzTpIcepk0o8(chr(48) + '\157' + '\063' + chr(196 - 146) + chr(0b110101), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\x31' + chr(1337 - 1283) + chr(0b110000), 54877 - 54869), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110000 + 0o4) + '\060', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(51) + '\062' + '\x32', 0o10), nzTpIcepk0o8(chr(0b10 + 0o56) + '\157' + chr(51) + chr(0b10 + 0o64) + chr(0b11101 + 0o26), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b1010 + 0o50) + chr(0b110010) + chr(55), 0b1000), nzTpIcepk0o8(chr(539 - 491) + chr(0b1101110 + 0o1) + chr(785 - 734) + '\063' + '\x37', 0o10), nzTpIcepk0o8(chr(1223 - 1175) + '\x6f' + chr(50) + '\060' + chr(52), 59584 - 59576), nzTpIcepk0o8('\x30' + chr(0b101011 + 0o104) + chr(50) + chr(0b110000) + chr(0b110000), 0o10), nzTpIcepk0o8(chr(110 - 62) + '\157' + chr(51) + chr(0b110000 + 0o0) + chr(563 - 513), 42992 - 42984), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b101011 + 0o6) + chr(2994 - 2939) + chr(1531 - 1483), 16206 - 16198), nzTpIcepk0o8(chr(0b110 + 0o52) + '\x6f' + chr(50) + chr(51) + '\x36', 0o10), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(0b1101111) + chr(0b110011) + chr(51) + '\064', 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(49) + chr(51) + chr(553 - 505), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1011001 + 0o26) + chr(72 - 21) + chr(0b110 + 0o61) + chr(1958 - 1907), 27933 - 27925), nzTpIcepk0o8('\x30' + chr(111) + chr(51) + chr(1179 - 1125) + chr(0b110001 + 0o5), ord("\x08")), nzTpIcepk0o8(chr(0b101110 + 0o2) + chr(5356 - 5245) + '\x32' + chr(49) + '\060', ord("\x08")), nzTpIcepk0o8(chr(946 - 898) + chr(8924 - 8813) + chr(0b110001) + chr(0b110011) + chr(0b11 + 0o63), 62203 - 62195), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(51) + chr(0b101001 + 0o10) + chr(2701 - 2646), 28781 - 28773), nzTpIcepk0o8(chr(0b10010 + 0o36) + chr(111) + chr(0b100001 + 0o22) + chr(0b110001) + chr(1950 - 1902), 0b1000), nzTpIcepk0o8(chr(0b100010 + 0o16) + '\x6f' + chr(0b11010 + 0o30) + chr(0b100001 + 0o21) + chr(0b110000 + 0o2), 0b1000), nzTpIcepk0o8(chr(0b1001 + 0o47) + '\157' + '\x31' + '\x31' + '\060', 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + '\063' + '\x35' + chr(51), 31360 - 31352), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\063' + chr(0b110100) + '\064', 20313 - 20305), nzTpIcepk0o8('\060' + chr(0b1001011 + 0o44) + chr(0b11100 + 0o25) + chr(0b101101 + 0o7), 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(49) + '\x31' + '\064', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(183 - 132) + '\x34' + chr(0b110111), 64013 - 64005), nzTpIcepk0o8(chr(0b11000 + 0o30) + '\157' + chr(2140 - 2086) + '\x31', 14804 - 14796), nzTpIcepk0o8('\060' + '\x6f' + '\063' + chr(0b1 + 0o66) + '\x37', 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b1101 + 0o45) + '\064' + chr(52), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1000101 + 0o52) + '\062' + chr(50), 49689 - 49681), nzTpIcepk0o8(chr(1707 - 1659) + '\157' + chr(1328 - 1278) + chr(0b11011 + 0o26) + chr(2364 - 2310), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b11101 + 0o23) + '\x6f' + chr(53) + chr(48), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'@'), chr(1909 - 1809) + chr(6762 - 6661) + chr(99) + chr(10440 - 10329) + chr(8194 - 8094) + '\x65')(chr(117) + '\164' + chr(0b100100 + 0o102) + chr(0b10000 + 0o35) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Yq_VkadBEmXG(ffiOpFBWGmZU, wjX8Ux7gSdNg): if not roI3spqORKae(wjX8Ux7gSdNg, roI3spqORKae(ES5oEprVxulp(b'\x1db\x10c\x1c<H\xac\xa1\x18'), chr(0b1100100) + chr(0b100010 + 0o103) + '\143' + chr(0b1101111) + chr(6778 - 6678) + chr(0b1010000 + 0o25))(chr(117) + chr(0b1110100) + chr(2032 - 1930) + '\x2d' + '\x38'))(roI3spqORKae(ES5oEprVxulp(b'0'), chr(6609 - 6509) + chr(0b1000000 + 0o45) + chr(0b1100011) + '\157' + '\144' + chr(101))(chr(0b1110101) + chr(116) + '\x66' + chr(45) + '\x38')): wjX8Ux7gSdNg = roI3spqORKae(ES5oEprVxulp(b'0'), '\x64' + chr(0b1100101) + '\x63' + '\157' + '\x64' + chr(101))(chr(9662 - 9545) + '\164' + chr(8919 - 8817) + chr(671 - 626) + '\070') + wjX8Ux7gSdNg K1GS0HcvMBFJ = aoTc4YA2bs2R.compile(wjX8Ux7gSdNg) return roI3spqORKae(K1GS0HcvMBFJ, roI3spqORKae(ES5oEprVxulp(b'\x06}H^\x01%R\xac\x96/Z\x93'), chr(0b111101 + 0o47) + chr(5062 - 4961) + chr(99) + '\157' + '\144' + '\145')(chr(0b1110101) + '\164' + chr(102) + chr(0b101101) + chr(56)))(ffiOpFBWGmZU)
rossant/ipymd
ipymd/core/prompt.py
create_prompt
def create_prompt(prompt): """Create a prompt manager. Parameters ---------- prompt : str or class driving from BasePromptManager The prompt name ('python' or 'ipython') or a custom PromptManager class. """ if prompt is None: prompt = 'python' if prompt == 'python': prompt = PythonPromptManager elif prompt == 'ipython': prompt = IPythonPromptManager # Instanciate the class. if isinstance(prompt, BasePromptManager): return prompt else: return prompt()
python
def create_prompt(prompt): """Create a prompt manager. Parameters ---------- prompt : str or class driving from BasePromptManager The prompt name ('python' or 'ipython') or a custom PromptManager class. """ if prompt is None: prompt = 'python' if prompt == 'python': prompt = PythonPromptManager elif prompt == 'ipython': prompt = IPythonPromptManager # Instanciate the class. if isinstance(prompt, BasePromptManager): return prompt else: return prompt()
[ "def", "create_prompt", "(", "prompt", ")", ":", "if", "prompt", "is", "None", ":", "prompt", "=", "'python'", "if", "prompt", "==", "'python'", ":", "prompt", "=", "PythonPromptManager", "elif", "prompt", "==", "'ipython'", ":", "prompt", "=", "IPythonPromptManager", "# Instanciate the class.", "if", "isinstance", "(", "prompt", ",", "BasePromptManager", ")", ":", "return", "prompt", "else", ":", "return", "prompt", "(", ")" ]
Create a prompt manager. Parameters ---------- prompt : str or class driving from BasePromptManager The prompt name ('python' or 'ipython') or a custom PromptManager class.
[ "Create", "a", "prompt", "manager", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/prompt.py#L231-L252
train
Create a prompt manager.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(7908 - 7797) + '\061' + '\x34' + '\x36', 0b1000), nzTpIcepk0o8(chr(0b101110 + 0o2) + '\157' + '\x33' + chr(2488 - 2435) + chr(0b101 + 0o56), 0o10), nzTpIcepk0o8(chr(0b101011 + 0o5) + chr(0b11001 + 0o126) + '\x33' + chr(0b100000 + 0o25) + chr(78 - 30), 0o10), nzTpIcepk0o8('\x30' + chr(0b111011 + 0o64) + chr(0b10 + 0o61) + '\x31' + chr(1667 - 1617), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110011) + '\064' + '\x33', ord("\x08")), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x31' + '\064' + chr(118 - 64), 8), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\x33' + '\x34' + chr(0b10000 + 0o43), 8), nzTpIcepk0o8(chr(1675 - 1627) + chr(0b1000 + 0o147) + chr(0b111 + 0o54) + '\x36' + '\060', 11605 - 11597), nzTpIcepk0o8('\x30' + chr(111) + chr(1314 - 1265) + '\x34' + chr(53), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1011 + 0o144) + chr(0b10011 + 0o37) + chr(52) + chr(0b110011), 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\063' + '\x31' + chr(1938 - 1888), 8), nzTpIcepk0o8('\060' + chr(0b1101110 + 0o1) + chr(537 - 487) + chr(50) + chr(0b110010), ord("\x08")), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(0b101110 + 0o101) + chr(50) + chr(1155 - 1105) + chr(0b110011), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\065' + '\063', 23490 - 23482), nzTpIcepk0o8(chr(0b110000) + chr(6954 - 6843) + '\x33' + chr(2239 - 2187) + chr(53), 0o10), nzTpIcepk0o8(chr(1058 - 1010) + '\x6f' + '\063' + '\x34' + chr(444 - 391), 8), nzTpIcepk0o8(chr(0b101000 + 0o10) + chr(111) + '\062' + chr(2431 - 2381) + chr(0b100100 + 0o22), 1180 - 1172), nzTpIcepk0o8('\060' + chr(111) + chr(0b110010) + '\x35' + chr(48), 0b1000), nzTpIcepk0o8('\060' + chr(0b1010111 + 0o30) + chr(0b110011 + 0o2) + chr(1793 - 1745), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\063' + chr(0b110 + 0o53) + '\063', 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(69 - 18) + chr(0b110011) + chr(0b110010), 0o10), nzTpIcepk0o8(chr(0b11011 + 0o25) + chr(11154 - 11043) + chr(0b110011) + '\061' + chr(2609 - 2554), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(2267 - 2217) + '\x30' + chr(0b10011 + 0o43), 0b1000), nzTpIcepk0o8('\060' + '\157' + '\061' + chr(649 - 600) + chr(234 - 181), 18813 - 18805), nzTpIcepk0o8('\060' + chr(2090 - 1979) + '\x31' + chr(53) + chr(0b0 + 0o66), 56939 - 56931), nzTpIcepk0o8(chr(0b11111 + 0o21) + chr(0b10110 + 0o131) + chr(1311 - 1261) + chr(1166 - 1118), 38409 - 38401), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110010) + chr(1273 - 1220) + chr(0b11011 + 0o32), 45116 - 45108), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110010) + '\x34' + chr(54), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b10011 + 0o134) + chr(55) + chr(0b11110 + 0o24), 29678 - 29670), nzTpIcepk0o8(chr(0b101100 + 0o4) + chr(350 - 239) + '\066', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(51) + chr(0b110101) + chr(1243 - 1192), 8), nzTpIcepk0o8('\x30' + chr(0b1001011 + 0o44) + chr(49) + chr(0b101011 + 0o6) + chr(1165 - 1114), 0b1000), nzTpIcepk0o8('\x30' + chr(0b110001 + 0o76) + '\063' + chr(49) + chr(0b110101), 7947 - 7939), nzTpIcepk0o8('\060' + chr(8961 - 8850) + chr(0b10010 + 0o40) + chr(755 - 701) + chr(53), 0b1000), nzTpIcepk0o8(chr(1401 - 1353) + chr(5515 - 5404) + chr(1358 - 1309) + chr(0b101110 + 0o2) + chr(0b100001 + 0o23), 0b1000), nzTpIcepk0o8(chr(0b100110 + 0o12) + '\x6f' + chr(0b110011) + chr(0b1111 + 0o45) + chr(812 - 764), 0o10), nzTpIcepk0o8(chr(661 - 613) + '\157' + chr(0b101001 + 0o11) + chr(2832 - 2777), 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110000 + 0o3) + chr(52) + '\066', 38991 - 38983), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b101111 + 0o2) + chr(53) + '\065', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(49) + chr(0b110111) + chr(2586 - 2532), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(111) + chr(53) + chr(814 - 766), 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'H'), chr(0b1000011 + 0o41) + chr(1502 - 1401) + chr(0b1001000 + 0o33) + '\x6f' + '\x64' + chr(0b1100101))(chr(8323 - 8206) + chr(0b1110 + 0o146) + '\146' + chr(0b101101) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def V1LTYkdUMlyb(cmXu1rkylvsq): if cmXu1rkylvsq is None: cmXu1rkylvsq = roI3spqORKae(ES5oEprVxulp(b'\x16\x92\x9c\xa2\x8c\x08'), chr(0b1100100) + '\x65' + chr(99) + '\x6f' + chr(0b1100100) + chr(6150 - 6049))(chr(117) + '\164' + chr(0b110010 + 0o64) + '\x2d' + '\x38') if cmXu1rkylvsq == roI3spqORKae(ES5oEprVxulp(b'\x16\x92\x9c\xa2\x8c\x08'), '\x64' + '\145' + chr(3432 - 3333) + chr(0b111000 + 0o67) + '\x64' + chr(101))(chr(0b1010110 + 0o37) + chr(0b1110100) + '\146' + '\055' + chr(56)): cmXu1rkylvsq = mFPb0mr98sfO elif cmXu1rkylvsq == roI3spqORKae(ES5oEprVxulp(b'\x0f\x9b\x91\xbe\x8b\t\x8d'), chr(100) + chr(0b1100101) + chr(0b1100011) + '\x6f' + chr(8665 - 8565) + chr(8111 - 8010))('\x75' + '\164' + chr(0b1100110) + chr(1148 - 1103) + chr(1353 - 1297)): cmXu1rkylvsq = _F8dbxQNRdfa if suIjIS24Zkqw(cmXu1rkylvsq, ueBSpJp_kgO8): return cmXu1rkylvsq else: return cmXu1rkylvsq()
rossant/ipymd
ipymd/core/prompt.py
BasePromptManager.split_input_output
def split_input_output(self, text): """Split code into input lines and output lines, according to the input and output prompt templates.""" lines = _to_lines(text) i = 0 for line in lines: if _starts_with_regex(line, self.input_prompt_regex): i += 1 else: break return lines[:i], lines[i:]
python
def split_input_output(self, text): """Split code into input lines and output lines, according to the input and output prompt templates.""" lines = _to_lines(text) i = 0 for line in lines: if _starts_with_regex(line, self.input_prompt_regex): i += 1 else: break return lines[:i], lines[i:]
[ "def", "split_input_output", "(", "self", ",", "text", ")", ":", "lines", "=", "_to_lines", "(", "text", ")", "i", "=", "0", "for", "line", "in", "lines", ":", "if", "_starts_with_regex", "(", "line", ",", "self", ".", "input_prompt_regex", ")", ":", "i", "+=", "1", "else", ":", "break", "return", "lines", "[", ":", "i", "]", ",", "lines", "[", "i", ":", "]" ]
Split code into input lines and output lines, according to the input and output prompt templates.
[ "Split", "code", "into", "input", "lines", "and", "output", "lines", "according", "to", "the", "input", "and", "output", "prompt", "templates", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/prompt.py#L87-L97
train
Split code into input lines and output lines according to the input and output prompt templates.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(111) + chr(986 - 934) + '\066', 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(50) + chr(48) + '\061', 0o10), nzTpIcepk0o8('\060' + '\157' + '\063' + chr(0b11010 + 0o32) + chr(48), 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(50) + chr(52) + '\067', 62070 - 62062), nzTpIcepk0o8('\060' + chr(111) + chr(49) + '\066' + chr(53), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x33' + chr(0b11000 + 0o32) + chr(1921 - 1873), ord("\x08")), nzTpIcepk0o8(chr(0b100000 + 0o20) + chr(9731 - 9620) + '\061' + '\x37' + '\064', 0o10), nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(0b1000 + 0o147) + chr(0b11101 + 0o30) + chr(0b110100), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b11001 + 0o30) + chr(0b110011 + 0o1) + '\x37', 39342 - 39334), nzTpIcepk0o8(chr(0b110000) + chr(4675 - 4564) + '\062' + chr(48), ord("\x08")), nzTpIcepk0o8('\x30' + chr(12248 - 12137) + chr(2274 - 2224) + '\064' + chr(50), 0b1000), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110010) + chr(0b10001 + 0o44) + chr(0b100 + 0o57), 57801 - 57793), nzTpIcepk0o8(chr(1625 - 1577) + chr(0b1000000 + 0o57) + chr(54) + '\064', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b110010) + '\066' + '\x36', 0b1000), nzTpIcepk0o8(chr(0b100110 + 0o12) + '\157' + '\x31' + '\065' + chr(0b101001 + 0o15), 8080 - 8072), nzTpIcepk0o8('\060' + '\x6f' + chr(0b110010) + chr(1963 - 1909) + chr(657 - 607), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\x35', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(49) + chr(51) + chr(49), 0o10), nzTpIcepk0o8(chr(0b101101 + 0o3) + '\157' + chr(0b101111 + 0o4) + '\061' + '\x33', 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(0b10111 + 0o33) + chr(54), 0b1000), nzTpIcepk0o8(chr(0b101011 + 0o5) + chr(0b110 + 0o151) + chr(0b101101 + 0o5) + '\064' + chr(0b1111 + 0o47), 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(49) + chr(50) + chr(0b101 + 0o55), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + '\063' + '\067' + '\061', 46170 - 46162), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(3091 - 2980) + chr(0b1111 + 0o43) + chr(1045 - 996) + chr(0b11011 + 0o34), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\061' + '\x32' + chr(53), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x32' + chr(55) + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(709 - 659) + '\065' + chr(0b0 + 0o67), ord("\x08")), nzTpIcepk0o8(chr(1099 - 1051) + chr(5314 - 5203) + chr(0b11001 + 0o31) + '\060' + chr(0b10101 + 0o34), 8), nzTpIcepk0o8(chr(1277 - 1229) + chr(111) + chr(1533 - 1482) + '\x31' + '\x33', 8), nzTpIcepk0o8(chr(48) + '\x6f' + '\061' + '\x35' + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + chr(50) + chr(0b110000), 8), nzTpIcepk0o8('\x30' + chr(0b1011101 + 0o22) + '\064' + chr(0b110101), 0o10), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\061' + chr(0b10010 + 0o40) + '\063', 0o10), nzTpIcepk0o8(chr(48) + chr(1690 - 1579) + chr(51) + chr(0b110010 + 0o5) + '\x37', 36244 - 36236), nzTpIcepk0o8(chr(0b101001 + 0o7) + chr(0b1100 + 0o143) + chr(50) + chr(1202 - 1152) + '\x34', 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + '\x33' + '\061' + '\x30', ord("\x08")), nzTpIcepk0o8(chr(411 - 363) + chr(0b1010100 + 0o33) + '\x31' + '\063' + chr(0b1010 + 0o50), ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + chr(1792 - 1742) + chr(1065 - 1016) + '\x33', 0o10), nzTpIcepk0o8(chr(1545 - 1497) + chr(0b1010110 + 0o31) + '\061' + '\064' + chr(1056 - 1005), 65193 - 65185), nzTpIcepk0o8(chr(2295 - 2247) + '\x6f' + chr(49) + chr(0b110000) + chr(0b111 + 0o54), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(240 - 192) + chr(0b1101010 + 0o5) + '\065' + chr(215 - 167), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\x08'), chr(4786 - 4686) + '\x65' + '\x63' + '\x6f' + chr(0b11000 + 0o114) + chr(0b1010000 + 0o25))(chr(0b10 + 0o163) + chr(13180 - 13064) + chr(102) + chr(556 - 511) + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def S_B6yJjYcq8V(hXMPsSrOQzbh, cpStk7cY1TJd): vniSnlI09HNg = lMuH1pjwgjH2(cpStk7cY1TJd) ZlbFMSG8gCoF = nzTpIcepk0o8('\x30' + chr(7925 - 7814) + chr(48), 57687 - 57679) for ffiOpFBWGmZU in vniSnlI09HNg: if Yq_VkadBEmXG(ffiOpFBWGmZU, roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'O\xef\x90\xd2\x01\x8f\x0c^\x08}\xd2\xdfk\xc4\x0b\xd5`!'), chr(0b1100100) + chr(101) + chr(0b111110 + 0o45) + chr(0b1101111) + '\x64' + '\x65')(chr(0b110100 + 0o101) + chr(0b1110100) + chr(0b11101 + 0o111) + chr(45) + '\x38'))): ZlbFMSG8gCoF += nzTpIcepk0o8('\060' + chr(8178 - 8067) + chr(146 - 97), 0b1000) else: break return (vniSnlI09HNg[:ZlbFMSG8gCoF], vniSnlI09HNg[ZlbFMSG8gCoF:])
rossant/ipymd
ipymd/core/contents_manager.py
IPymdContentsManager.get
def get(self, path, content=True, type=None, format=None): """ Takes a path for an entity and returns its model Parameters ---------- path : str the API path that describes the relative path for the target content : bool Whether to include the contents in the reply type : str, optional The requested type - 'file', 'notebook', or 'directory'. Will raise HTTPError 400 if the content doesn't match. format : str, optional The requested format for file contents. 'text' or 'base64'. Ignored if this returns a notebook or directory model. Returns ------- model : dict the contents model. If content=True, returns the contents of the file or directory as well. """ path = path.strip('/') # File extension of the chosen format. file_extension = format_manager().file_extension(self.format) if not self.exists(path): raise web.HTTPError(404, u'No such file or directory: %s' % path) os_path = self._get_os_path(path) if os.path.isdir(os_path): if type not in (None, 'directory'): raise web.HTTPError(400, u'%s is a directory, not a %s' % (path, type), reason='bad type') model = self._dir_model(path, content=content) elif type == 'notebook' or (type is None and (path.endswith('.ipynb') or path.endswith(file_extension))): # NEW model = self._notebook_model(path, content=content) else: if type == 'directory': raise web.HTTPError(400, u'%s is not a directory', reason='bad type') model = self._file_model(path, content=content, format=format) return model
python
def get(self, path, content=True, type=None, format=None): """ Takes a path for an entity and returns its model Parameters ---------- path : str the API path that describes the relative path for the target content : bool Whether to include the contents in the reply type : str, optional The requested type - 'file', 'notebook', or 'directory'. Will raise HTTPError 400 if the content doesn't match. format : str, optional The requested format for file contents. 'text' or 'base64'. Ignored if this returns a notebook or directory model. Returns ------- model : dict the contents model. If content=True, returns the contents of the file or directory as well. """ path = path.strip('/') # File extension of the chosen format. file_extension = format_manager().file_extension(self.format) if not self.exists(path): raise web.HTTPError(404, u'No such file or directory: %s' % path) os_path = self._get_os_path(path) if os.path.isdir(os_path): if type not in (None, 'directory'): raise web.HTTPError(400, u'%s is a directory, not a %s' % (path, type), reason='bad type') model = self._dir_model(path, content=content) elif type == 'notebook' or (type is None and (path.endswith('.ipynb') or path.endswith(file_extension))): # NEW model = self._notebook_model(path, content=content) else: if type == 'directory': raise web.HTTPError(400, u'%s is not a directory', reason='bad type') model = self._file_model(path, content=content, format=format) return model
[ "def", "get", "(", "self", ",", "path", ",", "content", "=", "True", ",", "type", "=", "None", ",", "format", "=", "None", ")", ":", "path", "=", "path", ".", "strip", "(", "'/'", ")", "# File extension of the chosen format.", "file_extension", "=", "format_manager", "(", ")", ".", "file_extension", "(", "self", ".", "format", ")", "if", "not", "self", ".", "exists", "(", "path", ")", ":", "raise", "web", ".", "HTTPError", "(", "404", ",", "u'No such file or directory: %s'", "%", "path", ")", "os_path", "=", "self", ".", "_get_os_path", "(", "path", ")", "if", "os", ".", "path", ".", "isdir", "(", "os_path", ")", ":", "if", "type", "not", "in", "(", "None", ",", "'directory'", ")", ":", "raise", "web", ".", "HTTPError", "(", "400", ",", "u'%s is a directory, not a %s'", "%", "(", "path", ",", "type", ")", ",", "reason", "=", "'bad type'", ")", "model", "=", "self", ".", "_dir_model", "(", "path", ",", "content", "=", "content", ")", "elif", "type", "==", "'notebook'", "or", "(", "type", "is", "None", "and", "(", "path", ".", "endswith", "(", "'.ipynb'", ")", "or", "path", ".", "endswith", "(", "file_extension", ")", ")", ")", ":", "# NEW", "model", "=", "self", ".", "_notebook_model", "(", "path", ",", "content", "=", "content", ")", "else", ":", "if", "type", "==", "'directory'", ":", "raise", "web", ".", "HTTPError", "(", "400", ",", "u'%s is not a directory'", ",", "reason", "=", "'bad type'", ")", "model", "=", "self", ".", "_file_model", "(", "path", ",", "content", "=", "content", ",", "format", "=", "format", ")", "return", "model" ]
Takes a path for an entity and returns its model Parameters ---------- path : str the API path that describes the relative path for the target content : bool Whether to include the contents in the reply type : str, optional The requested type - 'file', 'notebook', or 'directory'. Will raise HTTPError 400 if the content doesn't match. format : str, optional The requested format for file contents. 'text' or 'base64'. Ignored if this returns a notebook or directory model. Returns ------- model : dict the contents model. If content=True, returns the contents of the file or directory as well.
[ "Takes", "a", "path", "for", "an", "entity", "and", "returns", "its", "model", "Parameters", "----------", "path", ":", "str", "the", "API", "path", "that", "describes", "the", "relative", "path", "for", "the", "target", "content", ":", "bool", "Whether", "to", "include", "the", "contents", "in", "the", "reply", "type", ":", "str", "optional", "The", "requested", "type", "-", "file", "notebook", "or", "directory", ".", "Will", "raise", "HTTPError", "400", "if", "the", "content", "doesn", "t", "match", ".", "format", ":", "str", "optional", "The", "requested", "format", "for", "file", "contents", ".", "text", "or", "base64", ".", "Ignored", "if", "this", "returns", "a", "notebook", "or", "directory", "model", ".", "Returns", "-------", "model", ":", "dict", "the", "contents", "model", ".", "If", "content", "=", "True", "returns", "the", "contents", "of", "the", "file", "or", "directory", "as", "well", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/contents_manager.py#L64-L107
train
Returns a dictionary containing the contents of a file or directory.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b100011 + 0o20) + chr(52) + '\060', 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(51) + chr(0b100101 + 0o21) + '\060', 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(50) + '\060' + '\x36', 0o10), nzTpIcepk0o8('\060' + chr(7323 - 7212) + chr(0b100100 + 0o16) + '\064' + chr(0b110110), 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110001) + chr(50) + chr(0b100011 + 0o20), 0o10), nzTpIcepk0o8(chr(48) + chr(1507 - 1396) + chr(210 - 159) + chr(51) + chr(0b1001 + 0o53), 41068 - 41060), nzTpIcepk0o8(chr(48) + chr(10914 - 10803) + chr(0b110011) + '\x30' + chr(503 - 455), 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(1014 - 959) + chr(0b11001 + 0o31), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + '\063' + '\x37' + '\x36', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + chr(1604 - 1555) + '\064' + chr(0b110111), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b101000 + 0o12) + chr(48) + chr(0b11000 + 0o36), 8), nzTpIcepk0o8('\060' + '\157' + chr(54) + chr(0b1100 + 0o51), 56166 - 56158), nzTpIcepk0o8(chr(48) + chr(6886 - 6775) + chr(0b101 + 0o55) + chr(1515 - 1462) + '\063', 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(55), 0b1000), nzTpIcepk0o8('\x30' + '\157' + chr(219 - 166), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(7364 - 7253) + '\061' + '\061' + chr(0b11111 + 0o27), 0o10), nzTpIcepk0o8(chr(1507 - 1459) + chr(0b110000 + 0o77) + chr(0b110001) + chr(1321 - 1269) + chr(0b101011 + 0o7), 0b1000), nzTpIcepk0o8('\060' + chr(3154 - 3043) + chr(2315 - 2266) + '\065' + chr(2053 - 2000), 16637 - 16629), nzTpIcepk0o8(chr(983 - 935) + chr(0b100011 + 0o114) + '\x37' + chr(1111 - 1056), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x33' + '\060' + '\x34', 0o10), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b1100111 + 0o10) + chr(0b10000 + 0o44) + chr(1447 - 1395), 0b1000), nzTpIcepk0o8(chr(2026 - 1978) + '\x6f' + chr(577 - 526) + '\x36', 29996 - 29988), nzTpIcepk0o8(chr(0b110000) + chr(153 - 42) + chr(53) + chr(1216 - 1162), 0o10), nzTpIcepk0o8(chr(0b101010 + 0o6) + chr(0b1101111) + '\062' + chr(524 - 471) + chr(0b11101 + 0o30), ord("\x08")), nzTpIcepk0o8(chr(2138 - 2090) + '\157' + chr(50) + chr(49) + '\x31', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + chr(0b110010) + chr(0b100 + 0o57) + chr(0b111 + 0o54), 9424 - 9416), nzTpIcepk0o8('\x30' + chr(0b100000 + 0o117) + chr(470 - 415) + chr(49), 0o10), nzTpIcepk0o8(chr(348 - 300) + '\x6f' + chr(0b1110 + 0o45) + '\060' + '\x36', 36664 - 36656), nzTpIcepk0o8(chr(48) + chr(0b1101010 + 0o5) + chr(0b110001 + 0o1) + chr(0b100110 + 0o14) + chr(0b101101 + 0o4), 58427 - 58419), nzTpIcepk0o8('\x30' + '\x6f' + chr(0b110010) + chr(547 - 494), ord("\x08")), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(0b1001010 + 0o45) + chr(0b100110 + 0o14) + chr(0b11111 + 0o23), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\062' + chr(0b1001 + 0o52) + chr(2439 - 2384), 0b1000), nzTpIcepk0o8(chr(0b0 + 0o60) + '\x6f' + chr(0b10 + 0o64) + '\066', 0o10), nzTpIcepk0o8('\060' + '\157' + chr(52) + chr(0b110010), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b1110 + 0o43) + '\x33' + chr(0b110100), ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1100111 + 0o10) + '\x34' + '\x32', 8), nzTpIcepk0o8(chr(48) + chr(4456 - 4345) + chr(0b110010) + chr(0b10011 + 0o42) + '\x33', 8), nzTpIcepk0o8(chr(0b10 + 0o56) + '\157' + '\063' + chr(52) + chr(0b110111), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110010) + chr(0b0 + 0o62) + chr(0b110100), 55999 - 55991), nzTpIcepk0o8('\060' + chr(111) + '\x33' + '\063' + '\067', 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(53) + chr(48), 0o10)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xce'), chr(0b111001 + 0o53) + chr(0b1000110 + 0o37) + chr(99) + chr(0b10101 + 0o132) + '\144' + chr(0b111101 + 0o50))('\165' + chr(0b101010 + 0o112) + chr(102) + chr(45) + chr(0b1110 + 0o52)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def GUKetu4xaGsJ(hXMPsSrOQzbh, _pSYqrosNb95, M0YikwrsEpm5=nzTpIcepk0o8(chr(0b100001 + 0o17) + chr(10931 - 10820) + chr(1483 - 1434), 0b1000), MJ07XsN5uFgW=None, q33KG3foQ_CJ=None): _pSYqrosNb95 = _pSYqrosNb95.kdIDrcwZTCs5(roI3spqORKae(ES5oEprVxulp(b'\xcf'), chr(0b1100100) + chr(0b1100101) + chr(99) + '\x6f' + '\x64' + chr(0b1100101))(chr(0b1110101) + chr(0b1110100) + chr(1157 - 1055) + chr(1786 - 1741) + chr(1038 - 982))) o9htYukjAl9r = KMTFK8JTy9tA().file_extension(hXMPsSrOQzbh.q33KG3foQ_CJ) if not roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'\x9a\xa3\xcf\xdf=\x8c\xb5\x7f\x88\x0b\xd7\x01'), '\144' + chr(6029 - 5928) + chr(0b1000000 + 0o43) + chr(0b100100 + 0o113) + chr(100) + chr(8303 - 8202))('\165' + chr(0b1110100) + chr(0b10001 + 0o125) + '\055' + chr(56)))(_pSYqrosNb95): raise roI3spqORKae(TFc0ZWhpzVAW, roI3spqORKae(ES5oEprVxulp(b'\xa8\xa4\xd2\xf6\x16\xae\xb2U\x8c'), '\144' + '\x65' + chr(4946 - 4847) + chr(0b1100001 + 0o16) + chr(4176 - 4076) + chr(9307 - 9206))('\x75' + chr(0b1110100) + '\x66' + chr(45) + chr(0b111000)))(nzTpIcepk0o8(chr(0b101100 + 0o4) + '\x6f' + chr(1905 - 1851) + '\062' + chr(0b1001 + 0o53), 36089 - 36081), roI3spqORKae(ES5oEprVxulp(b'\xae\x9f\xa6\xd5&\xbf\xa8\x1a\x98\x0e\xeaP\x8bhwn\x06\x04M\xa1GjA\xdf\xf0\xa1\x19\xe3\xe2'), chr(0b1100100) + '\x65' + chr(3839 - 3740) + chr(5719 - 5608) + chr(100) + chr(101))('\165' + chr(0b110000 + 0o104) + chr(4361 - 4259) + chr(0b101101) + chr(0b111000)) % _pSYqrosNb95) yakQtslSFEFB = hXMPsSrOQzbh._get_os_path(_pSYqrosNb95) if roI3spqORKae(aHUqKstZLeS6.path, roI3spqORKae(ES5oEprVxulp(b'\xb8\x98\xd6\x97\t\xa8\x82\x03\x9f6\xfcw'), chr(9205 - 9105) + chr(101) + chr(0b1100011) + chr(10126 - 10015) + chr(0b1100001 + 0o3) + chr(0b1100101))('\165' + '\164' + chr(424 - 322) + '\x2d' + chr(0b0 + 0o70)))(yakQtslSFEFB): if MJ07XsN5uFgW not in (None, roI3spqORKae(ES5oEprVxulp(b'\x84\x99\xf4\xc30\xa8\xafH\x87'), '\144' + chr(0b1100101) + chr(99) + chr(8513 - 8402) + chr(1540 - 1440) + chr(9760 - 9659))('\165' + chr(116) + chr(5728 - 5626) + chr(45) + chr(56))): raise roI3spqORKae(TFc0ZWhpzVAW, roI3spqORKae(ES5oEprVxulp(b'\xa8\xa4\xd2\xf6\x16\xae\xb2U\x8c'), chr(0b111011 + 0o51) + chr(0b1100101) + '\x63' + chr(0b1101111) + '\x64' + chr(0b1100101))(chr(117) + chr(0b111110 + 0o66) + '\146' + '\055' + chr(2410 - 2354)))(nzTpIcepk0o8('\060' + chr(111) + chr(2323 - 2269) + chr(0b110010) + '\x30', ord("\x08")), roI3spqORKae(ES5oEprVxulp(b'\xc5\x83\xa6\xcf \xfc\xa1\x1a\x9a\x0e\xf4P\xc8sj<\x1bA\x1f\xaaKj\x0e\xcc\xa9\xbeJ'), chr(0b110111 + 0o55) + '\x65' + '\143' + chr(143 - 32) + chr(0b1010101 + 0o17) + '\x65')(chr(0b1110101) + chr(0b1110100) + chr(102) + '\x2d' + '\x38') % (_pSYqrosNb95, MJ07XsN5uFgW), reason=roI3spqORKae(ES5oEprVxulp(b"\x82\x91\xe2\x86'\xa5\xb0_"), chr(3463 - 3363) + chr(0b1100101) + chr(3725 - 3626) + '\x6f' + '\x64' + chr(0b1011111 + 0o6))(chr(117) + chr(12504 - 12388) + chr(102) + chr(45) + chr(56))) KW0sEfjlgNpM = hXMPsSrOQzbh._dir_model(_pSYqrosNb95, content=M0YikwrsEpm5) elif MJ07XsN5uFgW == roI3spqORKae(ES5oEprVxulp(b'\x8e\x9f\xf2\xc31\xb3\xafQ'), chr(0b1110 + 0o126) + chr(0b1100101) + '\143' + '\157' + '\x64' + chr(8329 - 8228))(chr(0b1110101) + '\164' + '\x66' + chr(45) + chr(0b111000)) or (MJ07XsN5uFgW is None and (roI3spqORKae(_pSYqrosNb95, roI3spqORKae(ES5oEprVxulp(b'\xa9\xc9\xe0\xed\x1a\x9f\x81v\x9f\x12\xccG'), chr(100) + chr(0b1010010 + 0o23) + '\143' + chr(0b1101111) + chr(0b1100100) + chr(9229 - 9128))(chr(2209 - 2092) + '\x74' + chr(0b1100110) + chr(0b101101) + chr(0b111000)))(roI3spqORKae(ES5oEprVxulp(b'\xce\x99\xf6\xdf=\xbe'), chr(100) + chr(101) + '\x63' + chr(8626 - 8515) + '\144' + chr(101))(chr(117) + chr(3487 - 3371) + '\x66' + chr(0b101101) + '\x38')) or roI3spqORKae(_pSYqrosNb95, roI3spqORKae(ES5oEprVxulp(b'\xa9\xc9\xe0\xed\x1a\x9f\x81v\x9f\x12\xccG'), chr(0b1100100) + chr(101) + chr(0b10101 + 0o116) + chr(628 - 517) + '\144' + chr(101))(chr(911 - 794) + chr(8258 - 8142) + chr(0b110010 + 0o64) + '\x2d' + chr(0b111000)))(o9htYukjAl9r))): KW0sEfjlgNpM = hXMPsSrOQzbh._notebook_model(_pSYqrosNb95, content=M0YikwrsEpm5) else: if MJ07XsN5uFgW == roI3spqORKae(ES5oEprVxulp(b'\x84\x99\xf4\xc30\xa8\xafH\x87'), chr(4373 - 4273) + '\145' + chr(0b1100011) + '\x6f' + chr(100) + '\145')(chr(0b101010 + 0o113) + '\164' + chr(0b1100110) + chr(1712 - 1667) + chr(0b11001 + 0o37)): raise roI3spqORKae(TFc0ZWhpzVAW, roI3spqORKae(ES5oEprVxulp(b'\xa8\xa4\xd2\xf6\x16\xae\xb2U\x8c'), chr(0b1100100) + chr(7145 - 7044) + '\x63' + '\x6f' + chr(9504 - 9404) + '\x65')(chr(117) + chr(422 - 306) + chr(0b1100110) + chr(0b11111 + 0o16) + '\070'))(nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(0b1101111) + '\x36' + chr(0b11 + 0o57) + '\x30', 8), roI3spqORKae(ES5oEprVxulp(b'\xc5\x83\xa6\xcf \xfc\xaeU\x8aG\xe7\x15\xcfnw+\x01\x19P\xb6]'), chr(0b111000 + 0o54) + '\x65' + '\143' + '\157' + chr(0b1100100) + '\x65')(chr(0b1110101) + chr(0b1000 + 0o154) + chr(0b100111 + 0o77) + chr(45) + chr(0b111000)), reason=roI3spqORKae(ES5oEprVxulp(b"\x82\x91\xe2\x86'\xa5\xb0_"), '\144' + '\x65' + '\x63' + chr(0b1101111) + '\x64' + '\145')(chr(117) + chr(116) + '\x66' + chr(45) + chr(0b111000))) KW0sEfjlgNpM = hXMPsSrOQzbh._file_model(_pSYqrosNb95, content=M0YikwrsEpm5, format=q33KG3foQ_CJ) return KW0sEfjlgNpM
rossant/ipymd
ipymd/core/contents_manager.py
IPymdContentsManager._read_notebook
def _read_notebook(self, os_path, as_version=4): """Read a notebook from an os path.""" with self.open(os_path, 'r', encoding='utf-8') as f: try: # NEW file_ext = _file_extension(os_path) if file_ext == '.ipynb': return nbformat.read(f, as_version=as_version) else: return convert(os_path, from_=self.format, to='notebook') except Exception as e: raise HTTPError( 400, u"Unreadable Notebook: %s %r" % (os_path, e), )
python
def _read_notebook(self, os_path, as_version=4): """Read a notebook from an os path.""" with self.open(os_path, 'r', encoding='utf-8') as f: try: # NEW file_ext = _file_extension(os_path) if file_ext == '.ipynb': return nbformat.read(f, as_version=as_version) else: return convert(os_path, from_=self.format, to='notebook') except Exception as e: raise HTTPError( 400, u"Unreadable Notebook: %s %r" % (os_path, e), )
[ "def", "_read_notebook", "(", "self", ",", "os_path", ",", "as_version", "=", "4", ")", ":", "with", "self", ".", "open", "(", "os_path", ",", "'r'", ",", "encoding", "=", "'utf-8'", ")", "as", "f", ":", "try", ":", "# NEW", "file_ext", "=", "_file_extension", "(", "os_path", ")", "if", "file_ext", "==", "'.ipynb'", ":", "return", "nbformat", ".", "read", "(", "f", ",", "as_version", "=", "as_version", ")", "else", ":", "return", "convert", "(", "os_path", ",", "from_", "=", "self", ".", "format", ",", "to", "=", "'notebook'", ")", "except", "Exception", "as", "e", ":", "raise", "HTTPError", "(", "400", ",", "u\"Unreadable Notebook: %s %r\"", "%", "(", "os_path", ",", "e", ")", ",", ")" ]
Read a notebook from an os path.
[ "Read", "a", "notebook", "from", "an", "os", "path", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/contents_manager.py#L110-L126
train
Read a notebook from an os path.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\060' + chr(9586 - 9475) + '\061' + '\x31', ord("\x08")), nzTpIcepk0o8(chr(0b1000 + 0o50) + chr(0b1101111) + '\062' + chr(0b10000 + 0o41) + chr(0b110111), 34599 - 34591), nzTpIcepk0o8(chr(0b110000) + chr(2549 - 2438) + '\062' + '\060' + '\063', 0o10), nzTpIcepk0o8(chr(1014 - 966) + '\x6f' + '\x34' + chr(265 - 214), 52634 - 52626), nzTpIcepk0o8('\060' + chr(111) + chr(53) + chr(0b10001 + 0o37), 0o10), nzTpIcepk0o8('\060' + chr(0b1101111) + '\x33' + chr(2202 - 2147) + chr(48), 0b1000), nzTpIcepk0o8(chr(0b1001 + 0o47) + chr(0b1100111 + 0o10) + chr(0b100110 + 0o15) + chr(0b100100 + 0o15) + chr(0b11000 + 0o32), 0b1000), nzTpIcepk0o8(chr(48) + chr(3355 - 3244) + chr(51) + chr(0b110011) + '\x33', 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\x31' + chr(0b110011) + '\x33', 0b1000), nzTpIcepk0o8(chr(48) + '\157' + '\x31' + chr(0b110011) + '\064', 0b1000), nzTpIcepk0o8(chr(0b10010 + 0o36) + '\157' + chr(0b110011) + chr(0b11010 + 0o33) + chr(55), ord("\x08")), nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(0b11110 + 0o121) + chr(0b1011 + 0o53) + chr(0b101101 + 0o5), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(0b101100 + 0o7) + '\066' + chr(1898 - 1845), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b11 + 0o57) + chr(54) + chr(0b10 + 0o63), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(52) + '\065', ord("\x08")), nzTpIcepk0o8('\x30' + '\x6f' + '\x34' + chr(0b100111 + 0o15), 0b1000), nzTpIcepk0o8(chr(0b1 + 0o57) + chr(0b1000110 + 0o51) + chr(49) + chr(544 - 492) + '\066', 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(55) + chr(0b110111), 0o10), nzTpIcepk0o8(chr(1932 - 1884) + chr(111) + '\x33' + chr(0b100 + 0o63) + '\x31', ord("\x08")), nzTpIcepk0o8('\x30' + chr(7903 - 7792) + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b101001 + 0o11) + chr(49) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(1608 - 1560) + chr(0b101010 + 0o105) + chr(2429 - 2376) + chr(1821 - 1767), 12213 - 12205), nzTpIcepk0o8(chr(0b110000) + chr(6311 - 6200) + chr(0b11010 + 0o27) + chr(0b10100 + 0o41) + chr(0b11000 + 0o36), 0o10), nzTpIcepk0o8('\x30' + chr(111) + chr(0b1111 + 0o42) + '\x33', 1251 - 1243), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x32' + chr(2376 - 2321) + chr(0b110101), 0b1000), nzTpIcepk0o8('\060' + chr(0b11110 + 0o121) + chr(0b110001) + '\x37', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b111011 + 0o64) + chr(400 - 351) + chr(1805 - 1751) + chr(52), 0o10), nzTpIcepk0o8(chr(0b111 + 0o51) + chr(111) + '\x31' + chr(51), 8), nzTpIcepk0o8(chr(0b101110 + 0o2) + chr(12007 - 11896) + chr(0b100110 + 0o14) + chr(54) + chr(0b11000 + 0o31), 0o10), nzTpIcepk0o8(chr(0b10111 + 0o31) + chr(111) + chr(0b10101 + 0o36) + chr(55) + chr(512 - 461), 2327 - 2319), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(50) + chr(1733 - 1682) + chr(571 - 519), 0o10), nzTpIcepk0o8(chr(475 - 427) + '\157' + '\062' + '\061' + '\063', 8), nzTpIcepk0o8('\x30' + chr(6309 - 6198) + '\x33' + chr(0b110001), 0o10), nzTpIcepk0o8('\060' + chr(0b1001100 + 0o43) + '\x32' + '\062' + '\061', 14108 - 14100), nzTpIcepk0o8(chr(2245 - 2197) + chr(111) + chr(2383 - 2334) + chr(53) + chr(48), 59387 - 59379), nzTpIcepk0o8(chr(0b100000 + 0o20) + '\157' + chr(1767 - 1716) + chr(2297 - 2245) + chr(51), 4666 - 4658), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b101111 + 0o3) + chr(0b1101 + 0o46) + chr(0b1111 + 0o42), ord("\x08")), nzTpIcepk0o8(chr(1042 - 994) + '\x6f' + chr(0b1001 + 0o50) + chr(874 - 820) + chr(0b110101), 29536 - 29528), nzTpIcepk0o8('\060' + chr(0b10101 + 0o132) + chr(2216 - 2163), 43046 - 43038), nzTpIcepk0o8(chr(567 - 519) + '\157' + chr(0b1011 + 0o52) + '\063', 29323 - 29315)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + chr(0b1101111) + '\x35' + '\060', 8)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b"'"), '\x64' + '\x65' + '\x63' + chr(111) + chr(100) + chr(6003 - 5902))(chr(0b11 + 0o162) + chr(0b10000 + 0o144) + '\x66' + chr(0b101101) + chr(0b111 + 0o61)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def LTEF_gQf5k2h(hXMPsSrOQzbh, yakQtslSFEFB, dbkRt7WiLYKT=nzTpIcepk0o8(chr(48) + chr(111) + '\x34', 7296 - 7288)): with roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'M\xe1\xd6\x10z\x89\xf3\x95n=\x83S'), chr(6471 - 6371) + chr(101) + chr(6632 - 6533) + chr(0b100 + 0o153) + '\x64' + '\x65')('\165' + '\x74' + chr(0b100 + 0o142) + chr(0b101100 + 0o1) + chr(0b100010 + 0o26)))(yakQtslSFEFB, roI3spqORKae(ES5oEprVxulp(b'{'), chr(100) + chr(101) + chr(0b1100011) + '\157' + chr(3529 - 3429) + chr(0b1010100 + 0o21))(chr(117) + chr(0b1010111 + 0o35) + '\146' + '\055' + chr(2821 - 2765)), encoding=roI3spqORKae(ES5oEprVxulp(b'|\xfb\xe5\x0e\x10'), chr(0b1100100) + chr(10135 - 10034) + '\143' + chr(111) + chr(2038 - 1938) + '\145')(chr(117) + chr(0b100001 + 0o123) + chr(0b1100110) + '\x2d' + '\x38')) as _R8IKF5IwAfX: try: PGps9Hfk1I5F = R7BWBDkLh5D9(yakQtslSFEFB) if PGps9Hfk1I5F == roI3spqORKae(ES5oEprVxulp(b"'\xe6\xf3ZF\x9a"), chr(100) + chr(101) + chr(0b1100011) + chr(111) + '\x64' + chr(0b100 + 0o141))(chr(6327 - 6210) + chr(116) + '\146' + chr(0b101101) + '\070'): return roI3spqORKae(Mj963EkMkRe1, roI3spqORKae(ES5oEprVxulp(b'l\xe0\xdbHF\xb0\xfd\x83\x0e2\xd8_'), chr(5167 - 5067) + chr(101) + '\x63' + chr(6456 - 6345) + chr(100) + '\145')('\x75' + chr(0b1110100) + '\x66' + chr(383 - 338) + '\x38'))(_R8IKF5IwAfX, as_version=dbkRt7WiLYKT) else: return Ke7SAGs_qhbe(yakQtslSFEFB, from_=roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'x\xbc\xb0ho\xcb\xac\xb4\n\x03\xacx'), chr(0b101110 + 0o66) + chr(7117 - 7016) + '\143' + chr(5706 - 5595) + chr(7086 - 6986) + chr(0b110101 + 0o60))(chr(117) + chr(0b1101000 + 0o14) + chr(0b1010 + 0o134) + chr(371 - 326) + chr(56))), to=roI3spqORKae(ES5oEprVxulp(b'g\xe0\xf7FJ\x97\xa5\xb0'), chr(0b1010010 + 0o22) + '\145' + '\143' + chr(111) + chr(100) + chr(4737 - 4636))(chr(2156 - 2039) + '\x74' + chr(0b1100110) + '\x2d' + chr(0b111000))) except zfo2Sgkz3IVJ as wgf0sgcu_xPL: raise ctvWmMCv5ZvA(nzTpIcepk0o8(chr(0b110000) + chr(0b1101101 + 0o2) + chr(1910 - 1856) + chr(0b110010) + '\060', 61819 - 61811), roI3spqORKae(ES5oEprVxulp(b'\\\xe1\xf1FI\x9c\xab\xb979\xcf|\x9a\xc1@F\tP\x92=\xab\x0b\x1d+\x98}'), chr(0b1100100) + chr(0b1100101) + chr(99) + chr(1339 - 1228) + '\144' + '\145')('\x75' + chr(1408 - 1292) + chr(0b10100 + 0o122) + chr(45) + chr(0b111000)) % (yakQtslSFEFB, wgf0sgcu_xPL))
rossant/ipymd
ipymd/core/contents_manager.py
IPymdContentsManager.save
def save(self, model, path=''): """Save the file model and return the model with no content.""" path = path.strip('/') if 'type' not in model: raise web.HTTPError(400, u'No file type provided') if 'content' not in model and model['type'] != 'directory': raise web.HTTPError(400, u'No file content provided') self.run_pre_save_hook(model=model, path=path) os_path = self._get_os_path(path) self.log.debug("Saving %s", os_path) try: if model['type'] == 'notebook': # NEW file_ext = _file_extension(os_path) if file_ext == '.ipynb': nb = nbformat.from_dict(model['content']) self.check_and_sign(nb, path) self._save_notebook(os_path, nb) else: contents = convert(model['content'], from_='notebook', to=self.format) # Save a text file. if (format_manager().file_type(self.format) in ('text', 'json')): self._save_file(os_path, contents, 'text') # Save to a binary file. else: format_manager().save(os_path, contents, name=self.format, overwrite=True) # One checkpoint should always exist for notebooks. if not self.checkpoints.list_checkpoints(path): self.create_checkpoint(path) elif model['type'] == 'file': # Missing format will be handled internally by _save_file. self._save_file(os_path, model['content'], model.get('format')) elif model['type'] == 'directory': self._save_directory(os_path, model, path) else: raise web.HTTPError(400, "Unhandled contents type: %s" % model['type']) except web.HTTPError: raise except Exception as e: self.log.error(u'Error while saving file: %s %s', path, e, exc_info=True) raise web.HTTPError(500, u'Unexpected error while saving file: %s %s' % (path, e)) validation_message = None if model['type'] == 'notebook': self.validate_notebook_model(model) validation_message = model.get('message', None) model = self.get(path, content=False) if validation_message: model['message'] = validation_message self.run_post_save_hook(model=model, os_path=os_path) return model
python
def save(self, model, path=''): """Save the file model and return the model with no content.""" path = path.strip('/') if 'type' not in model: raise web.HTTPError(400, u'No file type provided') if 'content' not in model and model['type'] != 'directory': raise web.HTTPError(400, u'No file content provided') self.run_pre_save_hook(model=model, path=path) os_path = self._get_os_path(path) self.log.debug("Saving %s", os_path) try: if model['type'] == 'notebook': # NEW file_ext = _file_extension(os_path) if file_ext == '.ipynb': nb = nbformat.from_dict(model['content']) self.check_and_sign(nb, path) self._save_notebook(os_path, nb) else: contents = convert(model['content'], from_='notebook', to=self.format) # Save a text file. if (format_manager().file_type(self.format) in ('text', 'json')): self._save_file(os_path, contents, 'text') # Save to a binary file. else: format_manager().save(os_path, contents, name=self.format, overwrite=True) # One checkpoint should always exist for notebooks. if not self.checkpoints.list_checkpoints(path): self.create_checkpoint(path) elif model['type'] == 'file': # Missing format will be handled internally by _save_file. self._save_file(os_path, model['content'], model.get('format')) elif model['type'] == 'directory': self._save_directory(os_path, model, path) else: raise web.HTTPError(400, "Unhandled contents type: %s" % model['type']) except web.HTTPError: raise except Exception as e: self.log.error(u'Error while saving file: %s %s', path, e, exc_info=True) raise web.HTTPError(500, u'Unexpected error while saving file: %s %s' % (path, e)) validation_message = None if model['type'] == 'notebook': self.validate_notebook_model(model) validation_message = model.get('message', None) model = self.get(path, content=False) if validation_message: model['message'] = validation_message self.run_post_save_hook(model=model, os_path=os_path) return model
[ "def", "save", "(", "self", ",", "model", ",", "path", "=", "''", ")", ":", "path", "=", "path", ".", "strip", "(", "'/'", ")", "if", "'type'", "not", "in", "model", ":", "raise", "web", ".", "HTTPError", "(", "400", ",", "u'No file type provided'", ")", "if", "'content'", "not", "in", "model", "and", "model", "[", "'type'", "]", "!=", "'directory'", ":", "raise", "web", ".", "HTTPError", "(", "400", ",", "u'No file content provided'", ")", "self", ".", "run_pre_save_hook", "(", "model", "=", "model", ",", "path", "=", "path", ")", "os_path", "=", "self", ".", "_get_os_path", "(", "path", ")", "self", ".", "log", ".", "debug", "(", "\"Saving %s\"", ",", "os_path", ")", "try", ":", "if", "model", "[", "'type'", "]", "==", "'notebook'", ":", "# NEW", "file_ext", "=", "_file_extension", "(", "os_path", ")", "if", "file_ext", "==", "'.ipynb'", ":", "nb", "=", "nbformat", ".", "from_dict", "(", "model", "[", "'content'", "]", ")", "self", ".", "check_and_sign", "(", "nb", ",", "path", ")", "self", ".", "_save_notebook", "(", "os_path", ",", "nb", ")", "else", ":", "contents", "=", "convert", "(", "model", "[", "'content'", "]", ",", "from_", "=", "'notebook'", ",", "to", "=", "self", ".", "format", ")", "# Save a text file.", "if", "(", "format_manager", "(", ")", ".", "file_type", "(", "self", ".", "format", ")", "in", "(", "'text'", ",", "'json'", ")", ")", ":", "self", ".", "_save_file", "(", "os_path", ",", "contents", ",", "'text'", ")", "# Save to a binary file.", "else", ":", "format_manager", "(", ")", ".", "save", "(", "os_path", ",", "contents", ",", "name", "=", "self", ".", "format", ",", "overwrite", "=", "True", ")", "# One checkpoint should always exist for notebooks.", "if", "not", "self", ".", "checkpoints", ".", "list_checkpoints", "(", "path", ")", ":", "self", ".", "create_checkpoint", "(", "path", ")", "elif", "model", "[", "'type'", "]", "==", "'file'", ":", "# Missing format will be handled internally by _save_file.", "self", ".", "_save_file", "(", "os_path", ",", "model", "[", "'content'", "]", ",", "model", ".", "get", "(", "'format'", ")", ")", "elif", "model", "[", "'type'", "]", "==", "'directory'", ":", "self", ".", "_save_directory", "(", "os_path", ",", "model", ",", "path", ")", "else", ":", "raise", "web", ".", "HTTPError", "(", "400", ",", "\"Unhandled contents type: %s\"", "%", "model", "[", "'type'", "]", ")", "except", "web", ".", "HTTPError", ":", "raise", "except", "Exception", "as", "e", ":", "self", ".", "log", ".", "error", "(", "u'Error while saving file: %s %s'", ",", "path", ",", "e", ",", "exc_info", "=", "True", ")", "raise", "web", ".", "HTTPError", "(", "500", ",", "u'Unexpected error while saving file: %s %s'", "%", "(", "path", ",", "e", ")", ")", "validation_message", "=", "None", "if", "model", "[", "'type'", "]", "==", "'notebook'", ":", "self", ".", "validate_notebook_model", "(", "model", ")", "validation_message", "=", "model", ".", "get", "(", "'message'", ",", "None", ")", "model", "=", "self", ".", "get", "(", "path", ",", "content", "=", "False", ")", "if", "validation_message", ":", "model", "[", "'message'", "]", "=", "validation_message", "self", ".", "run_post_save_hook", "(", "model", "=", "model", ",", "os_path", "=", "os_path", ")", "return", "model" ]
Save the file model and return the model with no content.
[ "Save", "the", "file", "model", "and", "return", "the", "model", "with", "no", "content", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/core/contents_manager.py#L128-L193
train
Save the file model and return the model with no content.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + '\157' + '\063' + '\060', 13343 - 13335), nzTpIcepk0o8(chr(0b11011 + 0o25) + chr(0b1101011 + 0o4) + chr(1331 - 1281) + chr(568 - 514) + chr(0b110111), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(49) + chr(381 - 326) + '\065', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(51) + chr(0b110000) + chr(55), 0b1000), nzTpIcepk0o8(chr(155 - 107) + chr(111) + '\x31' + chr(2267 - 2215) + chr(418 - 363), 51873 - 51865), nzTpIcepk0o8('\x30' + chr(0b11001 + 0o126) + '\x32' + '\x34' + chr(801 - 750), 0o10), nzTpIcepk0o8(chr(0b11001 + 0o27) + '\x6f' + '\063' + '\061' + '\x33', 0o10), nzTpIcepk0o8('\x30' + '\x6f' + '\x32' + chr(0b110110) + chr(52), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(10995 - 10884) + chr(2003 - 1953) + '\x35' + '\x31', 0o10), nzTpIcepk0o8(chr(0b1111 + 0o41) + chr(111) + chr(0b1000 + 0o51) + chr(0b11010 + 0o27) + '\065', 19130 - 19122), nzTpIcepk0o8(chr(741 - 693) + chr(0b1101111) + '\x32' + chr(374 - 319) + '\067', 25199 - 25191), nzTpIcepk0o8('\060' + chr(111) + '\x32' + chr(0b101100 + 0o6) + chr(49), 18154 - 18146), nzTpIcepk0o8(chr(1545 - 1497) + '\x6f' + chr(50) + chr(1090 - 1040) + chr(0b11001 + 0o31), 0o10), nzTpIcepk0o8('\060' + chr(0b1001 + 0o146) + chr(0b110000 + 0o3) + chr(1416 - 1366) + '\065', 55014 - 55006), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(54) + '\066', 62087 - 62079), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110001) + chr(0b110011) + '\x36', 0o10), nzTpIcepk0o8(chr(48) + chr(3825 - 3714) + chr(0b110001) + chr(0b101010 + 0o6) + chr(48), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(1414 - 1364) + chr(55), 21936 - 21928), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(405 - 353) + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + '\061' + chr(53) + chr(1170 - 1122), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(50) + chr(0b110111) + chr(55), 8), nzTpIcepk0o8(chr(0b110000) + chr(0b101100 + 0o103) + chr(54 - 4) + chr(0b110000) + chr(0b10 + 0o63), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\062' + chr(2834 - 2779) + chr(0b110100), 46761 - 46753), nzTpIcepk0o8(chr(0b110000 + 0o0) + '\x6f' + chr(631 - 582) + '\x33' + chr(51), 0b1000), nzTpIcepk0o8(chr(0b1010 + 0o46) + chr(0b1000010 + 0o55) + '\x31' + chr(299 - 250) + '\067', 0o10), nzTpIcepk0o8('\060' + chr(10377 - 10266) + chr(51) + '\062' + chr(0b110110), ord("\x08")), nzTpIcepk0o8('\060' + chr(7844 - 7733) + chr(1904 - 1855) + chr(0b10111 + 0o36) + chr(107 - 52), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(6883 - 6772) + chr(0b110001) + '\067' + '\060', 0o10), nzTpIcepk0o8('\x30' + chr(111) + '\x31' + chr(50) + chr(0b1001 + 0o53), ord("\x08")), nzTpIcepk0o8(chr(261 - 213) + chr(0b1011 + 0o144) + chr(0b110011) + chr(0b110011) + '\066', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b10110 + 0o33) + '\x35' + chr(0b11100 + 0o26), 56696 - 56688), nzTpIcepk0o8(chr(0b101101 + 0o3) + '\x6f' + chr(49) + '\064' + '\064', 0o10), nzTpIcepk0o8('\x30' + chr(0b1000101 + 0o52) + chr(0b1101 + 0o45) + chr(351 - 301) + chr(0b11011 + 0o32), 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110010) + chr(55) + '\061', 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\066', 4012 - 4004), nzTpIcepk0o8(chr(0b1 + 0o57) + '\157' + '\062' + '\062', 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1 + 0o156) + '\x33' + '\062' + chr(0b10 + 0o63), 8), nzTpIcepk0o8(chr(0b11110 + 0o22) + chr(0b10110 + 0o131) + chr(0b110010) + chr(2164 - 2116) + '\x30', 24895 - 24887), nzTpIcepk0o8('\x30' + chr(8823 - 8712) + chr(0b10010 + 0o37) + chr(0b11000 + 0o36) + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(337 - 288) + chr(0b110010) + chr(52), 8)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(2026 - 1973) + chr(48), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'6'), chr(7083 - 6983) + chr(0b1000010 + 0o43) + chr(99) + chr(7000 - 6889) + '\144' + chr(0b1100101))('\x75' + '\164' + chr(0b110010 + 0o64) + chr(0b100 + 0o51) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def mwgZMvWSpAHg(hXMPsSrOQzbh, KW0sEfjlgNpM, _pSYqrosNb95=roI3spqORKae(ES5oEprVxulp(b''), chr(100) + chr(0b1001111 + 0o26) + '\x63' + chr(9105 - 8994) + chr(3863 - 3763) + '\x65')('\x75' + '\x74' + '\146' + chr(45) + chr(0b111000))): _pSYqrosNb95 = _pSYqrosNb95.kdIDrcwZTCs5(roI3spqORKae(ES5oEprVxulp(b'7'), chr(0b111 + 0o135) + chr(0b1100101) + chr(3405 - 3306) + chr(1537 - 1426) + '\x64' + chr(0b101101 + 0o70))(chr(6333 - 6216) + '\164' + chr(102) + chr(164 - 119) + '\070')) if roI3spqORKae(ES5oEprVxulp(b'l\xce\r\xa2'), '\x64' + '\x65' + '\x63' + chr(4284 - 4173) + chr(0b1100100) + '\145')('\x75' + chr(0b1110100) + chr(102) + chr(0b1 + 0o54) + '\070') not in KW0sEfjlgNpM: raise roI3spqORKae(TFc0ZWhpzVAW, roI3spqORKae(ES5oEprVxulp(b'P\xe3)\x97"\xd1\xb9\xdb\xdb'), chr(0b11100 + 0o110) + chr(0b100000 + 0o105) + chr(6439 - 6340) + chr(3483 - 3372) + chr(5486 - 5386) + chr(101))('\x75' + '\164' + '\146' + chr(0b11000 + 0o25) + chr(0b100011 + 0o25)))(nzTpIcepk0o8('\060' + '\x6f' + chr(0b110110) + chr(0b110010) + '\060', ord("\x08")), roI3spqORKae(ES5oEprVxulp(b'V\xd8]\xa1\x0e\xcf\xae\x94\xdd4\xcf\xf4\xb2\xa5D16~B\r\xdb'), chr(0b1100100) + chr(7543 - 7442) + chr(0b100001 + 0o102) + '\x6f' + chr(1473 - 1373) + chr(101))('\165' + chr(3739 - 3623) + chr(102) + chr(45) + chr(0b10001 + 0o47))) if roI3spqORKae(ES5oEprVxulp(b'{\xd8\x13\xb3\x02\xcd\xbf'), chr(0b1100100) + chr(101) + '\143' + chr(11824 - 11713) + '\144' + '\x65')(chr(12001 - 11884) + '\x74' + chr(0b1100110) + chr(0b101101) + chr(56)) not in KW0sEfjlgNpM and KW0sEfjlgNpM[roI3spqORKae(ES5oEprVxulp(b'l\xce\r\xa2'), '\144' + chr(101) + chr(99) + chr(0b1101111) + '\x64' + chr(2504 - 2403))('\x75' + '\x74' + chr(1889 - 1787) + chr(0b111 + 0o46) + chr(1470 - 1414))] != roI3spqORKae(ES5oEprVxulp(b'|\xde\x0f\xa2\x04\xd7\xa4\xc6\xd0'), chr(0b1100100) + chr(101) + chr(0b1010111 + 0o14) + '\157' + '\x64' + '\145')('\165' + '\x74' + '\x66' + chr(0b101101) + chr(0b11001 + 0o37)): raise roI3spqORKae(TFc0ZWhpzVAW, roI3spqORKae(ES5oEprVxulp(b'P\xe3)\x97"\xd1\xb9\xdb\xdb'), '\x64' + chr(0b111100 + 0o51) + chr(4334 - 4235) + chr(111) + '\x64' + chr(9785 - 9684))(chr(0b1010001 + 0o44) + chr(116) + '\146' + chr(0b101101) + '\070'))(nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(54) + '\x32' + chr(48), 8), roI3spqORKae(ES5oEprVxulp(b'V\xd8]\xa1\x0e\xcf\xae\x94\xca"\xd1\xe5\xf7\xbbB~0eI\x1e\xd6\xe1\xd9?'), '\x64' + '\145' + '\143' + chr(111) + chr(100) + '\x65')(chr(0b1000 + 0o155) + '\164' + '\x66' + chr(0b101000 + 0o5) + chr(56))) roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'j\xc2\x13\x98\x17\xd1\xae\xeb\xda,\xc9\xf4\xcd\xbdY1+'), chr(0b101010 + 0o72) + '\145' + chr(0b1100011) + chr(0b1101111) + chr(100) + chr(3179 - 3078))(chr(3773 - 3656) + chr(0b1101111 + 0o5) + '\146' + chr(45) + chr(56)))(model=KW0sEfjlgNpM, path=_pSYqrosNb95) yakQtslSFEFB = hXMPsSrOQzbh._get_os_path(_pSYqrosNb95) roI3spqORKae(hXMPsSrOQzbh.log, roI3spqORKae(ES5oEprVxulp(b'\x7f\xf6D\x9d^\xc7\xa4\x82\xfc \xfa\xcb'), chr(4716 - 4616) + chr(101) + '\x63' + chr(0b1101111) + '\144' + chr(0b1001000 + 0o35))('\x75' + chr(0b1101101 + 0o7) + '\x66' + '\x2d' + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'K\xd6\x0b\xae\t\xc4\xeb\x91\xda'), chr(0b1100100) + chr(0b1100101) + '\143' + chr(111) + chr(4690 - 4590) + '\x65')(chr(0b1011010 + 0o33) + chr(5561 - 5445) + chr(102) + chr(1813 - 1768) + '\x38'), yakQtslSFEFB) try: if KW0sEfjlgNpM[roI3spqORKae(ES5oEprVxulp(b'l\xce\r\xa2'), chr(0b1000110 + 0o36) + '\145' + chr(1809 - 1710) + chr(111) + chr(0b10000 + 0o124) + chr(8411 - 8310))(chr(117) + chr(116) + '\x66' + chr(0b101101) + chr(56))] == roI3spqORKae(ES5oEprVxulp(b'v\xd8\t\xa2\x05\xcc\xa4\xdf'), chr(0b1100100) + chr(101) + chr(99) + chr(0b111000 + 0o67) + chr(0b1100100) + chr(0b1100101))('\x75' + '\x74' + '\x66' + '\x2d' + chr(2446 - 2390)): PGps9Hfk1I5F = R7BWBDkLh5D9(yakQtslSFEFB) if PGps9Hfk1I5F == roI3spqORKae(ES5oEprVxulp(b'6\xde\r\xbe\t\xc1'), chr(3873 - 3773) + chr(0b111111 + 0o46) + chr(4058 - 3959) + chr(4493 - 4382) + '\144' + chr(101))('\x75' + chr(9462 - 9346) + chr(102) + chr(45) + '\070'): tOeBFi3ucCqm = Mj963EkMkRe1.bbbJ3NnlZx1Z(KW0sEfjlgNpM[roI3spqORKae(ES5oEprVxulp(b'{\xd8\x13\xb3\x02\xcd\xbf'), chr(3092 - 2992) + '\x65' + '\x63' + chr(0b1101111) + chr(4995 - 4895) + chr(0b1010010 + 0o23))(chr(5623 - 5506) + chr(6567 - 6451) + chr(0b1100110) + '\055' + chr(56))]) roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'{\xdf\x18\xa4\x0c\xfc\xaa\xda\xcd\x12\xcc\xf8\xf5\xbb'), chr(100) + chr(101) + '\x63' + chr(0b10 + 0o155) + chr(0b1110 + 0o126) + chr(0b1100 + 0o131))(chr(0b1110101) + chr(0b1110100) + '\146' + '\x2d' + chr(56)))(tOeBFi3ucCqm, _pSYqrosNb95) roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'G\xc4\x1c\xb1\x02\xfc\xa5\xdb\xdd(\xdd\xfe\xfd\xbe'), '\144' + '\x65' + '\143' + chr(0b1000 + 0o147) + '\144' + chr(0b1100101))('\x75' + chr(10145 - 10029) + '\146' + chr(0b101101) + chr(1164 - 1108)))(yakQtslSFEFB, tOeBFi3ucCqm) else: Pbl0gxeZ3EHD = Ke7SAGs_qhbe(KW0sEfjlgNpM[roI3spqORKae(ES5oEprVxulp(b'{\xd8\x13\xb3\x02\xcd\xbf'), chr(0b10010 + 0o122) + chr(101) + chr(0b1001011 + 0o30) + '\x6f' + chr(100) + chr(0b100011 + 0o102))(chr(0b1110101) + chr(2471 - 2355) + chr(102) + chr(0b101101) + chr(56))], from_=roI3spqORKae(ES5oEprVxulp(b'v\xd8\t\xa2\x05\xcc\xa4\xdf'), chr(7464 - 7364) + '\145' + chr(99) + chr(111) + chr(100) + chr(101))('\165' + chr(116) + chr(3192 - 3090) + chr(45) + chr(0b11110 + 0o32)), to=hXMPsSrOQzbh.q33KG3foQ_CJ) if roI3spqORKae(KMTFK8JTy9tA(), roI3spqORKae(ES5oEprVxulp(b'u\xe0\x0e\x83\x17\xe4\xf8\xcd\xfb\n\xf3\xeb'), '\144' + chr(101) + '\x63' + '\157' + '\x64' + chr(101))(chr(117) + '\x74' + chr(0b1100110) + chr(187 - 142) + '\x38'))(roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'i\x84N\x8c \x90\xad\xdb\xf8\x12\xfc\xdb'), '\144' + chr(0b1011100 + 0o11) + chr(0b101101 + 0o66) + chr(2984 - 2873) + chr(100) + chr(0b110001 + 0o64))('\x75' + chr(7759 - 7643) + '\146' + chr(0b101101) + chr(56)))) in (roI3spqORKae(ES5oEprVxulp(b'l\xd2\x05\xb3'), chr(100) + '\x65' + chr(0b1010111 + 0o14) + chr(111) + chr(1480 - 1380) + chr(0b1100101))(chr(117) + chr(2760 - 2644) + '\x66' + chr(0b101101) + chr(0b111000)), roI3spqORKae(ES5oEprVxulp(b'r\xc4\x12\xa9'), chr(100) + chr(6864 - 6763) + chr(4735 - 4636) + chr(0b100010 + 0o115) + chr(7926 - 7826) + chr(0b1000010 + 0o43))(chr(0b11110 + 0o127) + '\164' + chr(0b1000001 + 0o45) + '\055' + chr(56))): roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'G\xc4\x1c\xb1\x02\xfc\xad\xdd\xc5('), chr(0b10110 + 0o116) + chr(0b1100101) + '\x63' + '\x6f' + chr(100) + chr(0b1100101))('\x75' + '\x74' + chr(102) + chr(657 - 612) + chr(0b111000)))(yakQtslSFEFB, Pbl0gxeZ3EHD, roI3spqORKae(ES5oEprVxulp(b'l\xd2\x05\xb3'), chr(0b1100100) + chr(101) + chr(6582 - 6483) + chr(111) + chr(100) + chr(0b1100101))(chr(117) + chr(8079 - 7963) + chr(0b1100110) + '\055' + '\x38')) else: roI3spqORKae(KMTFK8JTy9tA(), roI3spqORKae(ES5oEprVxulp(b'u\xc0\x1a\x9d*\xd5\x9c\xe7\xd9\x0c\xf7\xf6'), '\144' + '\145' + chr(0b110100 + 0o57) + chr(0b10100 + 0o133) + '\144' + chr(6699 - 6598))(chr(0b1000101 + 0o60) + '\164' + chr(0b111100 + 0o52) + chr(709 - 664) + chr(0b111000)))(yakQtslSFEFB, Pbl0gxeZ3EHD, name=roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'i\x84N\x8c \x90\xad\xdb\xf8\x12\xfc\xdb'), '\144' + chr(101) + chr(99) + chr(111) + chr(0b1011011 + 0o11) + '\145')(chr(8807 - 8690) + chr(6374 - 6258) + chr(102) + chr(1044 - 999) + chr(56))), overwrite=nzTpIcepk0o8(chr(63 - 15) + '\157' + chr(49), 0o10)) if not roI3spqORKae(hXMPsSrOQzbh.checkpoints, roI3spqORKae(ES5oEprVxulp(b't\xde\x0e\xb38\xc0\xa3\xd1\xca&\xcf\xfe\xfb\xbbB-'), chr(0b1100100) + chr(101) + chr(0b11 + 0o140) + chr(1087 - 976) + '\144' + '\145')(chr(6743 - 6626) + '\x74' + chr(7057 - 6955) + '\055' + chr(56)))(_pSYqrosNb95): roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'{\xc5\x18\xa6\x13\xc6\x94\xd7\xc1(\xdc\xfa\xe2\xba_04'), chr(100) + '\x65' + '\x63' + '\x6f' + chr(0b100000 + 0o104) + '\145')('\165' + '\x74' + '\x66' + chr(1511 - 1466) + chr(1270 - 1214)))(_pSYqrosNb95) elif KW0sEfjlgNpM[roI3spqORKae(ES5oEprVxulp(b'l\xce\r\xa2'), '\144' + chr(0b1010100 + 0o21) + chr(0b1100011) + '\157' + chr(0b11101 + 0o107) + '\145')(chr(9994 - 9877) + chr(116) + chr(102) + chr(0b11010 + 0o23) + chr(0b10111 + 0o41))] == roI3spqORKae(ES5oEprVxulp(b'~\xde\x11\xa2'), chr(0b1100100) + '\145' + '\x63' + chr(111) + chr(100) + chr(0b1100101))(chr(0b1 + 0o164) + chr(116) + chr(0b1100110) + chr(1471 - 1426) + chr(0b1100 + 0o54)): roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'G\xc4\x1c\xb1\x02\xfc\xad\xdd\xc5('), chr(100) + chr(0b1100101) + chr(0b11010 + 0o111) + chr(111) + chr(2127 - 2027) + '\x65')(chr(0b1110101) + chr(0b1110100) + '\146' + chr(0b101101) + '\x38'))(yakQtslSFEFB, KW0sEfjlgNpM[roI3spqORKae(ES5oEprVxulp(b'{\xd8\x13\xb3\x02\xcd\xbf'), '\144' + chr(0b1100101) + chr(4132 - 4033) + chr(9203 - 9092) + chr(4862 - 4762) + chr(0b1100101))('\x75' + chr(2180 - 2064) + chr(0b1011101 + 0o11) + '\055' + chr(56))], roI3spqORKae(KW0sEfjlgNpM, roI3spqORKae(ES5oEprVxulp(b'_\xe26\xa2\x13\xd6\xff\xcc\xc8\n\xcc\xdb'), chr(7604 - 7504) + chr(0b110110 + 0o57) + '\143' + chr(0b1101 + 0o142) + '\144' + chr(788 - 687))(chr(117) + chr(0b1110100) + chr(102) + '\x2d' + '\070'))(roI3spqORKae(ES5oEprVxulp(b'~\xd8\x0f\xaa\x06\xd7'), chr(0b1010100 + 0o20) + chr(0b1100101) + chr(99) + chr(111) + '\x64' + chr(101))(chr(0b1110101) + chr(0b1110100) + '\146' + chr(0b11111 + 0o16) + chr(0b111000)))) elif KW0sEfjlgNpM[roI3spqORKae(ES5oEprVxulp(b'l\xce\r\xa2'), '\x64' + '\x65' + chr(99) + chr(0b1101111) + chr(4112 - 4012) + '\145')('\x75' + chr(116) + chr(0b111101 + 0o51) + chr(45) + chr(1492 - 1436))] == roI3spqORKae(ES5oEprVxulp(b'|\xde\x0f\xa2\x04\xd7\xa4\xc6\xd0'), '\144' + '\145' + chr(99) + chr(111) + chr(0b1011010 + 0o12) + '\x65')(chr(0b1100 + 0o151) + chr(116) + chr(102) + chr(0b100011 + 0o12) + '\x38'): roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'G\xc4\x1c\xb1\x02\xfc\xaf\xdd\xdb(\xdc\xe5\xfd\xa7O'), chr(1156 - 1056) + '\x65' + chr(774 - 675) + '\157' + '\x64' + chr(101))(chr(117) + chr(0b1110100) + '\x66' + chr(45) + chr(56)))(yakQtslSFEFB, KW0sEfjlgNpM, _pSYqrosNb95) else: raise roI3spqORKae(TFc0ZWhpzVAW, roI3spqORKae(ES5oEprVxulp(b'P\xe3)\x97"\xd1\xb9\xdb\xdb'), chr(100) + '\x65' + chr(2616 - 2517) + '\x6f' + '\x64' + chr(8340 - 8239))('\165' + '\x74' + chr(102) + chr(771 - 726) + chr(0b111000)))(nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(54) + chr(0b110010) + '\x30', 8), roI3spqORKae(ES5oEprVxulp(b'M\xd9\x15\xa6\t\xc7\xa7\xd1\xcdm\xdc\xfe\xfc\xa1S04d\x06\x1c\xc6\xf5\xd9ao\xf3\x1c'), '\x64' + chr(0b1100101) + chr(0b1000101 + 0o36) + '\x6f' + chr(100) + '\145')(chr(0b1110101) + '\x74' + chr(4723 - 4621) + chr(45) + chr(0b111000)) % KW0sEfjlgNpM[roI3spqORKae(ES5oEprVxulp(b'l\xce\r\xa2'), chr(2498 - 2398) + '\145' + '\x63' + chr(111) + chr(0b1100100) + chr(0b1100101))('\x75' + chr(0b1110100) + '\x66' + '\055' + '\x38')]) except roI3spqORKae(TFc0ZWhpzVAW, roI3spqORKae(ES5oEprVxulp(b'P\xe3)\x97"\xd1\xb9\xdb\xdb'), chr(0b1100100) + chr(4616 - 4515) + chr(3802 - 3703) + '\157' + chr(100) + chr(0b1100101))(chr(0b1000 + 0o155) + chr(7765 - 7649) + chr(0b10000 + 0o126) + '\055' + chr(0b111000))): raise except zfo2Sgkz3IVJ as wgf0sgcu_xPL: roI3spqORKae(hXMPsSrOQzbh.log, roI3spqORKae(ES5oEprVxulp(b'i\xdeL\xb0\x0e\xd3\x9b\xe2\xdf\x08\xf4\xf5'), '\144' + '\145' + '\x63' + chr(2377 - 2266) + '\144' + chr(101))('\165' + chr(116) + '\x66' + chr(0b10001 + 0o34) + '\x38'))(roI3spqORKae(ES5oEprVxulp(b']\xc5\x0f\xa8\x15\x83\xbc\xdc\xc0!\xda\xb1\xe1\xb4@7.p\x06\x0e\xd6\xe9\xd9ao\xf3\x1cXq\xad'), '\x64' + chr(7879 - 7778) + '\143' + chr(1611 - 1500) + chr(0b1100100) + '\145')('\165' + chr(9411 - 9295) + chr(102) + chr(0b11001 + 0o24) + chr(0b111000)), _pSYqrosNb95, wgf0sgcu_xPL, exc_info=nzTpIcepk0o8(chr(48) + chr(111) + chr(1021 - 972), 8)) raise roI3spqORKae(TFc0ZWhpzVAW, roI3spqORKae(ES5oEprVxulp(b'P\xe3)\x97"\xd1\xb9\xdb\xdb'), chr(6698 - 6598) + chr(101) + chr(0b1100011) + '\157' + '\x64' + chr(101))('\165' + chr(2881 - 2765) + chr(0b1100110) + chr(45) + '\070'))(nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b111 + 0o60) + chr(0b110110) + '\064', ord("\x08")), roI3spqORKae(ES5oEprVxulp(b'M\xd9\x18\xbf\x17\xc6\xa8\xc0\xcc)\x9f\xf4\xe0\xa7Y,``N\x01\xd3\xe0\x9c(.\xa0\x06\x163\xfe\x0c\r\xf9\xdc<2\xf0\xf3Qqk'), '\144' + '\145' + chr(0b1100011) + chr(8773 - 8662) + '\x64' + chr(5337 - 5236))('\165' + chr(116) + chr(5092 - 4990) + chr(0b101101) + '\070') % (_pSYqrosNb95, wgf0sgcu_xPL)) GU466_vue6mB = None if KW0sEfjlgNpM[roI3spqORKae(ES5oEprVxulp(b'l\xce\r\xa2'), '\x64' + '\145' + chr(0b1100011) + chr(111) + chr(0b1100100) + '\x65')(chr(0b1001101 + 0o50) + '\164' + chr(102) + chr(45) + '\x38')] == roI3spqORKae(ES5oEprVxulp(b'v\xd8\t\xa2\x05\xcc\xa4\xdf'), chr(0b100111 + 0o75) + chr(0b1100101) + chr(99) + chr(7545 - 7434) + '\x64' + '\145')(chr(2504 - 2387) + chr(1092 - 976) + chr(102) + chr(45) + chr(56)): roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'n\xd6\x11\xae\x03\xc2\xbf\xd1\xf6#\xd0\xe5\xf7\xb7Y1+HK\x07\xdb\xe0\xd0'), '\144' + chr(101) + chr(0b1100011) + '\157' + chr(7656 - 7556) + '\145')(chr(0b1110101) + '\x74' + chr(102) + chr(0b101011 + 0o2) + chr(0b111000)))(KW0sEfjlgNpM) GU466_vue6mB = KW0sEfjlgNpM.GUKetu4xaGsJ(roI3spqORKae(ES5oEprVxulp(b'u\xd2\x0e\xb4\x06\xc4\xae'), '\144' + chr(0b1100101) + chr(99) + '\157' + chr(2349 - 2249) + chr(0b101101 + 0o70))(chr(0b1000010 + 0o63) + chr(5079 - 4963) + '\146' + chr(45) + chr(2866 - 2810)), None) KW0sEfjlgNpM = hXMPsSrOQzbh.GUKetu4xaGsJ(_pSYqrosNb95, content=nzTpIcepk0o8(chr(0b1 + 0o57) + chr(0b110101 + 0o72) + '\x30', 32991 - 32983)) if GU466_vue6mB: KW0sEfjlgNpM[roI3spqORKae(ES5oEprVxulp(b'u\xd2\x0e\xb4\x06\xc4\xae'), chr(0b1100100) + chr(0b110001 + 0o64) + chr(0b1100011) + '\157' + '\x64' + chr(0b1 + 0o144))(chr(13004 - 12887) + chr(0b11110 + 0o126) + chr(0b1100110) + chr(998 - 953) + chr(0b11111 + 0o31))] = GU466_vue6mB roI3spqORKae(hXMPsSrOQzbh, roI3spqORKae(ES5oEprVxulp(b'j\xc2\x13\x98\x17\xcc\xb8\xc0\xf6>\xde\xe7\xf7\x8a^1/|'), '\x64' + chr(4106 - 4005) + '\143' + chr(111) + chr(0b1100100) + '\x65')('\165' + chr(0b1100100 + 0o20) + '\x66' + '\055' + chr(56)))(model=KW0sEfjlgNpM, os_path=yakQtslSFEFB) return KW0sEfjlgNpM
rossant/ipymd
ipymd/formats/python.py
_split_python
def _split_python(python): """Split Python source into chunks. Chunks are separated by at least two return lines. The break must not be followed by a space. Also, long Python strings spanning several lines are not splitted. """ python = _preprocess(python) if not python: return [] lexer = PythonSplitLexer() lexer.read(python) return lexer.chunks
python
def _split_python(python): """Split Python source into chunks. Chunks are separated by at least two return lines. The break must not be followed by a space. Also, long Python strings spanning several lines are not splitted. """ python = _preprocess(python) if not python: return [] lexer = PythonSplitLexer() lexer.read(python) return lexer.chunks
[ "def", "_split_python", "(", "python", ")", ":", "python", "=", "_preprocess", "(", "python", ")", "if", "not", "python", ":", "return", "[", "]", "lexer", "=", "PythonSplitLexer", "(", ")", "lexer", ".", "read", "(", "python", ")", "return", "lexer", ".", "chunks" ]
Split Python source into chunks. Chunks are separated by at least two return lines. The break must not be followed by a space. Also, long Python strings spanning several lines are not splitted.
[ "Split", "Python", "source", "into", "chunks", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/formats/python.py#L86-L99
train
Split Python source into chunks.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(689 - 641) + chr(111) + chr(0b11100 + 0o25) + chr(835 - 784) + '\063', 0b1000), nzTpIcepk0o8(chr(0b110 + 0o52) + '\157' + '\061' + '\060' + chr(1241 - 1191), 0b1000), nzTpIcepk0o8(chr(0b0 + 0o60) + '\157' + chr(1227 - 1178) + chr(2714 - 2660) + '\061', ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + '\x33' + chr(543 - 495), 0b1000), nzTpIcepk0o8(chr(1605 - 1557) + '\157' + '\x33' + chr(0b110101) + '\060', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(2263 - 2214) + chr(1752 - 1699) + '\x33', 39393 - 39385), nzTpIcepk0o8(chr(0b11011 + 0o25) + '\x6f' + chr(0b110010) + '\x34' + chr(48), 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(55) + chr(1258 - 1207), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(1221 - 1110) + chr(1219 - 1170) + chr(0b10111 + 0o34) + chr(0b110101), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + '\x33' + chr(0b110001), ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(1659 - 1609) + '\062', 36293 - 36285), nzTpIcepk0o8('\060' + '\157' + chr(0b110011) + '\x32' + '\x30', ord("\x08")), nzTpIcepk0o8(chr(48) + '\157' + '\062' + '\066', 0o10), nzTpIcepk0o8(chr(1571 - 1523) + chr(0b11111 + 0o120) + chr(486 - 437) + chr(1305 - 1255) + '\x34', 65385 - 65377), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(49) + '\060' + chr(0b11110 + 0o22), 0o10), nzTpIcepk0o8('\x30' + chr(11785 - 11674) + chr(0b11010 + 0o30) + chr(1115 - 1064) + '\x32', 0o10), nzTpIcepk0o8(chr(48) + '\157' + chr(0b110001) + chr(0b110010) + chr(53), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(6758 - 6647) + '\x31' + '\x36' + chr(0b110001), 8), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(0b110010), ord("\x08")), nzTpIcepk0o8(chr(48) + '\x6f' + chr(2216 - 2161) + '\x36', 0b1000), nzTpIcepk0o8('\x30' + '\x6f' + chr(51) + chr(54), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + '\061' + chr(0b100101 + 0o22) + '\x32', 49669 - 49661), nzTpIcepk0o8(chr(566 - 518) + chr(0b111011 + 0o64) + '\x32' + '\x35' + '\x30', 0o10), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(51) + chr(971 - 917) + '\x32', 27303 - 27295), nzTpIcepk0o8('\x30' + chr(111) + chr(0b110011) + chr(53) + chr(48), 8), nzTpIcepk0o8(chr(2244 - 2196) + chr(0b1101111) + chr(0b101101 + 0o4) + chr(0b110011), 0o10), nzTpIcepk0o8(chr(0b110000 + 0o0) + chr(0b101110 + 0o101) + chr(0b110010) + '\x35' + chr(0b110010), 0o10), nzTpIcepk0o8(chr(2135 - 2087) + chr(0b111 + 0o150) + '\062' + chr(316 - 264) + '\061', ord("\x08")), nzTpIcepk0o8(chr(202 - 154) + chr(0b1101111) + chr(0b100100 + 0o15) + '\x32' + '\x37', 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(51) + '\x33', ord("\x08")), nzTpIcepk0o8(chr(0b1000 + 0o50) + '\x6f' + '\063' + chr(55) + chr(0b110101), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(51) + '\x31' + chr(0b11011 + 0o26), 0b1000), nzTpIcepk0o8(chr(0b1101 + 0o43) + '\157' + chr(0b110001) + chr(0b100000 + 0o24) + '\064', 0o10), nzTpIcepk0o8(chr(0b1110 + 0o42) + chr(6724 - 6613) + '\x33' + '\064' + '\x33', 61847 - 61839), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(0b100001 + 0o116) + '\061' + chr(49) + '\060', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\063' + '\062' + '\061', 0b1000), nzTpIcepk0o8(chr(0b10110 + 0o32) + chr(0b1101111) + chr(1780 - 1729) + chr(1968 - 1913) + '\x35', 8), nzTpIcepk0o8('\060' + '\x6f' + chr(162 - 112) + chr(1469 - 1415) + '\x35', 5808 - 5800), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\063' + chr(0b101100 + 0o13) + '\062', 32357 - 32349), nzTpIcepk0o8(chr(0b110000) + chr(0b1011101 + 0o22) + chr(49) + chr(0b10000 + 0o40) + chr(55), 38644 - 38636)][ZlbFMSG8gCoF % nzTpIcepk0o8('\x30' + '\157' + '\x35' + '\060', 19933 - 19925)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'u'), chr(0b110 + 0o136) + chr(3677 - 3576) + chr(4288 - 4189) + '\x6f' + chr(2755 - 2655) + '\x65')('\x75' + chr(0b11001 + 0o133) + chr(0b11000 + 0o116) + chr(0b1111 + 0o36) + chr(0b1101 + 0o53)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def Z4DpMfSYmBYv(DpS_k8vJ9ZvJ): DpS_k8vJ9ZvJ = UW9KLZ_cLQRD(DpS_k8vJ9ZvJ) if not DpS_k8vJ9ZvJ: return [] ERB1xkaExN1P = QFB02CXmEnuO() roI3spqORKae(ERB1xkaExN1P, roI3spqORKae(ES5oEprVxulp(b'>-)s\x86#\x97c\x08w%\xbd'), '\x64' + chr(6259 - 6158) + '\143' + chr(5433 - 5322) + chr(100) + chr(1261 - 1160))(chr(117) + chr(8947 - 8831) + chr(2645 - 2543) + '\055' + chr(1234 - 1178)))(DpS_k8vJ9ZvJ) return roI3spqORKae(ERB1xkaExN1P, roI3spqORKae(ES5oEprVxulp(b'4\x18?k\x86\x1c\xceP\nCA\xb8'), chr(0b1010001 + 0o23) + '\145' + chr(99) + chr(0b1101111) + chr(0b1100010 + 0o2) + chr(101))('\165' + chr(0b100101 + 0o117) + chr(0b110 + 0o140) + chr(0b10010 + 0o33) + chr(0b101 + 0o63)))
rossant/ipymd
ipymd/formats/python.py
_is_chunk_markdown
def _is_chunk_markdown(source): """Return whether a chunk contains Markdown contents.""" lines = source.splitlines() if all(line.startswith('# ') for line in lines): # The chunk is a Markdown *unless* it is commented Python code. source = '\n'.join(line[2:] for line in lines if not line[2:].startswith('#')) # skip headers if not source: return True # Try to parse the chunk: if it fails, it is Markdown, otherwise, # it is Python. return not _is_python(source) return False
python
def _is_chunk_markdown(source): """Return whether a chunk contains Markdown contents.""" lines = source.splitlines() if all(line.startswith('# ') for line in lines): # The chunk is a Markdown *unless* it is commented Python code. source = '\n'.join(line[2:] for line in lines if not line[2:].startswith('#')) # skip headers if not source: return True # Try to parse the chunk: if it fails, it is Markdown, otherwise, # it is Python. return not _is_python(source) return False
[ "def", "_is_chunk_markdown", "(", "source", ")", ":", "lines", "=", "source", ".", "splitlines", "(", ")", "if", "all", "(", "line", ".", "startswith", "(", "'# '", ")", "for", "line", "in", "lines", ")", ":", "# The chunk is a Markdown *unless* it is commented Python code.", "source", "=", "'\\n'", ".", "join", "(", "line", "[", "2", ":", "]", "for", "line", "in", "lines", "if", "not", "line", "[", "2", ":", "]", ".", "startswith", "(", "'#'", ")", ")", "# skip headers", "if", "not", "source", ":", "return", "True", "# Try to parse the chunk: if it fails, it is Markdown, otherwise,", "# it is Python.", "return", "not", "_is_python", "(", "source", ")", "return", "False" ]
Return whether a chunk contains Markdown contents.
[ "Return", "whether", "a", "chunk", "contains", "Markdown", "contents", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/formats/python.py#L102-L114
train
Return whether a chunk contains Markdown contents.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(11442 - 11331) + chr(51) + chr(1738 - 1685) + '\x35', 0o10), nzTpIcepk0o8('\060' + '\x6f' + chr(50) + '\x31', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b110001 + 0o1) + chr(1081 - 1029) + chr(0b110101), ord("\x08")), nzTpIcepk0o8(chr(0b0 + 0o60) + chr(0b1011 + 0o144) + '\067' + chr(0b1101 + 0o46), 59790 - 59782), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110011) + '\x37' + '\060', 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(1728 - 1678) + '\x36' + chr(2504 - 2453), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + '\x33' + chr(53) + chr(1448 - 1397), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(11954 - 11843) + '\061' + '\060' + '\065', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(55) + chr(0b110010), 0b1000), nzTpIcepk0o8(chr(0b100 + 0o54) + chr(0b1101111) + chr(0b110001) + '\x34', 42233 - 42225), nzTpIcepk0o8(chr(0b10110 + 0o32) + '\x6f' + chr(0b110001) + chr(0b110110) + '\065', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(50) + '\065' + '\x30', 855 - 847), nzTpIcepk0o8(chr(1372 - 1324) + chr(0b1101111) + '\065' + chr(49), 16885 - 16877), nzTpIcepk0o8(chr(0b110000) + chr(0b10001 + 0o136) + '\x31' + chr(53) + '\x36', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(2233 - 2184) + chr(49) + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(0b1101111) + chr(258 - 208) + chr(313 - 263) + chr(998 - 946), 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\061' + '\x36' + chr(1915 - 1861), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(51) + chr(49), 0b1000), nzTpIcepk0o8(chr(48) + chr(111) + '\063' + chr(2310 - 2260), ord("\x08")), nzTpIcepk0o8(chr(817 - 769) + '\157' + chr(0b110011) + chr(49) + '\x33', 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + '\x31' + '\x36', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(593 - 542) + chr(0b110011 + 0o3) + '\063', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(49) + chr(55) + chr(0b110000), 0o10), nzTpIcepk0o8(chr(0b1101 + 0o43) + chr(0b1010010 + 0o35) + '\x33' + chr(0b110011) + chr(2191 - 2139), 0o10), nzTpIcepk0o8('\x30' + chr(12147 - 12036) + chr(1666 - 1615) + '\x31' + '\x32', 0o10), nzTpIcepk0o8(chr(0b100011 + 0o15) + chr(0b101100 + 0o103) + chr(0b110010) + chr(0b100010 + 0o22) + chr(54), ord("\x08")), nzTpIcepk0o8('\x30' + chr(111) + chr(1685 - 1635) + chr(0b110101) + '\x37', 45938 - 45930), nzTpIcepk0o8('\060' + chr(0b1011010 + 0o25) + chr(0b110010) + chr(52) + '\x33', 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110000), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(5167 - 5056) + '\x31' + chr(0b110101), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(289 - 240) + chr(234 - 186) + '\x30', ord("\x08")), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(51) + '\065' + '\066', 0o10), nzTpIcepk0o8(chr(0b10001 + 0o37) + chr(0b10101 + 0o132) + chr(0b110011) + chr(54) + chr(0b100110 + 0o15), 8), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(0b110010) + '\063' + chr(0b110110), 0b1000), nzTpIcepk0o8('\060' + chr(0b1100001 + 0o16) + '\064' + chr(50), ord("\x08")), nzTpIcepk0o8('\060' + chr(0b110110 + 0o71) + chr(51) + chr(0b100111 + 0o14) + '\063', ord("\x08")), nzTpIcepk0o8('\060' + chr(9582 - 9471) + chr(999 - 949) + '\x34' + chr(1835 - 1784), 8), nzTpIcepk0o8(chr(1265 - 1217) + chr(0b1011 + 0o144) + chr(233 - 183) + chr(0b101011 + 0o11), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(2033 - 1922) + '\061' + '\x36' + chr(0b110101), 8), nzTpIcepk0o8(chr(48) + chr(111) + '\061' + chr(0b110010), 0o10)][ZlbFMSG8gCoF % nzTpIcepk0o8('\060' + '\x6f' + chr(0b110101) + '\060', ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xc3'), chr(100) + chr(0b1100101) + chr(99) + '\x6f' + chr(0b1100100) + '\145')('\165' + '\164' + chr(102) + chr(0b110 + 0o47) + chr(0b111000)) + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def EtkvibOKGMxY(TRsEnjL8YDa6): vniSnlI09HNg = TRsEnjL8YDa6.splitlines() if qX60lO1lgHA5((roI3spqORKae(ffiOpFBWGmZU, roI3spqORKae(ES5oEprVxulp(b'\x9ee\xc4I\x8c\xc0\x9c,Nd'), chr(4172 - 4072) + '\x65' + chr(7249 - 7150) + chr(0b1000 + 0o147) + '\144' + chr(101))('\x75' + chr(0b1010111 + 0o35) + chr(9575 - 9473) + '\055' + chr(56)))(roI3spqORKae(ES5oEprVxulp(b'\xce1'), chr(0b1100100) + chr(101) + chr(0b1100011) + '\157' + '\x64' + chr(3631 - 3530))('\165' + chr(0b1110100) + '\146' + chr(45) + chr(0b101100 + 0o14))) for ffiOpFBWGmZU in vniSnlI09HNg)): TRsEnjL8YDa6 = roI3spqORKae(ES5oEprVxulp(b'\xe7'), chr(0b101111 + 0o65) + '\145' + '\x63' + chr(6846 - 6735) + '\144' + '\145')('\x75' + '\164' + chr(0b1100110) + chr(45) + chr(0b111000)).Y4yM9BcfTCNq((ffiOpFBWGmZU[nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b110010), 0o10):] for ffiOpFBWGmZU in vniSnlI09HNg if not ffiOpFBWGmZU[nzTpIcepk0o8('\x30' + '\157' + '\x32', 8):].startswith(roI3spqORKae(ES5oEprVxulp(b'\xce'), chr(1820 - 1720) + chr(7617 - 7516) + chr(3273 - 3174) + '\157' + chr(0b1100000 + 0o4) + chr(0b1000111 + 0o36))(chr(4501 - 4384) + chr(0b1101001 + 0o13) + chr(957 - 855) + chr(0b101101) + '\070')))) if not TRsEnjL8YDa6: return nzTpIcepk0o8(chr(0b111 + 0o51) + '\157' + chr(0b100001 + 0o20), 0o10) return not gM8NpnIQCVPr(TRsEnjL8YDa6) return nzTpIcepk0o8(chr(0b110000) + '\157' + '\060', 8)
rossant/ipymd
ipymd/formats/python.py
_add_hash
def _add_hash(source): """Add a leading hash '#' at the beginning of every line in the source.""" source = '\n'.join('# ' + line.rstrip() for line in source.splitlines()) return source
python
def _add_hash(source): """Add a leading hash '#' at the beginning of every line in the source.""" source = '\n'.join('# ' + line.rstrip() for line in source.splitlines()) return source
[ "def", "_add_hash", "(", "source", ")", ":", "source", "=", "'\\n'", ".", "join", "(", "'# '", "+", "line", ".", "rstrip", "(", ")", "for", "line", "in", "source", ".", "splitlines", "(", ")", ")", "return", "source" ]
Add a leading hash '#' at the beginning of every line in the source.
[ "Add", "a", "leading", "hash", "#", "at", "the", "beginning", "of", "every", "line", "in", "the", "source", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/formats/python.py#L122-L126
train
Add a leading hash '#' at the beginning of every line in the source.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(51) + '\x36' + '\062', 37570 - 37562), nzTpIcepk0o8('\060' + chr(4477 - 4366) + chr(49) + chr(504 - 452) + '\063', 0o10), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b110001) + chr(0b100111 + 0o11) + '\x31', 0b1000), nzTpIcepk0o8(chr(48) + '\x6f' + '\x34' + chr(1184 - 1134), 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(1325 - 1275) + '\060' + chr(55), 0o10), nzTpIcepk0o8('\060' + chr(0b100111 + 0o110) + chr(0b110111) + chr(0b110110), 45346 - 45338), nzTpIcepk0o8(chr(1059 - 1011) + chr(0b1000001 + 0o56) + '\063' + '\064' + '\x30', 0o10), nzTpIcepk0o8('\x30' + chr(0b1101111) + chr(1175 - 1124) + '\067' + chr(52), ord("\x08")), nzTpIcepk0o8('\x30' + '\157' + chr(0b110011) + chr(1172 - 1120) + '\x32', 0o10), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110011) + chr(48) + '\x31', 0o10), nzTpIcepk0o8(chr(48) + chr(0b101 + 0o152) + chr(1543 - 1494) + chr(50) + '\x37', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + '\x37' + chr(2446 - 2392), 8), nzTpIcepk0o8(chr(0b110000) + chr(0b1101001 + 0o6) + '\063' + chr(0b110001), ord("\x08")), nzTpIcepk0o8(chr(0b11000 + 0o30) + chr(0b1101010 + 0o5) + '\x33' + chr(1548 - 1493) + '\060', 0o10), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(50) + chr(53) + chr(260 - 210), 56124 - 56116), nzTpIcepk0o8(chr(48) + '\x6f' + chr(0b110001) + chr(646 - 592) + chr(2027 - 1975), 0o10), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(50) + '\x34' + chr(0b110011), 0b1000), nzTpIcepk0o8(chr(48) + chr(0b0 + 0o157) + '\062' + '\060' + chr(0b110110), ord("\x08")), nzTpIcepk0o8(chr(866 - 818) + chr(0b11 + 0o154) + chr(0b110001) + chr(54) + '\065', 0b1000), nzTpIcepk0o8(chr(0b1100 + 0o44) + chr(0b1101111) + chr(0b110001) + chr(52) + chr(0b110100), 18362 - 18354), nzTpIcepk0o8(chr(0b11100 + 0o24) + '\157' + chr(0b11101 + 0o26) + '\067' + '\062', 47855 - 47847), nzTpIcepk0o8('\060' + chr(111) + chr(0b110011) + chr(0b110101) + chr(2226 - 2175), 0b1000), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110110) + '\x35', 0b1000), nzTpIcepk0o8(chr(0b110000) + chr(111) + chr(0b101001 + 0o10) + chr(1119 - 1067) + chr(48), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + chr(1292 - 1241) + '\061', 8), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x32' + chr(0b111 + 0o57) + chr(0b11010 + 0o33), 46093 - 46085), nzTpIcepk0o8(chr(0b110000) + chr(5253 - 5142) + chr(0b110010) + chr(0b110111) + chr(1437 - 1387), 0o10), nzTpIcepk0o8(chr(48) + chr(2615 - 2504) + chr(756 - 705) + chr(49) + chr(49), 0o10), nzTpIcepk0o8('\060' + '\157' + chr(0b110001 + 0o5) + '\x35', 8), nzTpIcepk0o8('\060' + '\x6f' + chr(0b1100 + 0o46) + chr(1069 - 1015) + '\x35', 8), nzTpIcepk0o8('\x30' + chr(467 - 356) + chr(1184 - 1130) + '\065', 8), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(49) + chr(0b110101) + chr(676 - 625), 29675 - 29667), nzTpIcepk0o8(chr(0b11011 + 0o25) + chr(0b1101111) + chr(907 - 858) + chr(787 - 739), 23098 - 23090), nzTpIcepk0o8(chr(98 - 50) + '\x6f' + chr(0b110011) + '\x33' + chr(0b110101), 30402 - 30394), nzTpIcepk0o8(chr(0b1010 + 0o46) + '\x6f' + chr(55) + chr(96 - 45), 0o10), nzTpIcepk0o8('\060' + '\157' + chr(49) + chr(0b110111) + chr(0b110101), 63384 - 63376), nzTpIcepk0o8('\x30' + chr(111) + chr(49) + chr(0b1 + 0o60) + chr(0b101110 + 0o4), 0o10), nzTpIcepk0o8(chr(515 - 467) + chr(2357 - 2246) + '\061' + chr(0b0 + 0o62) + '\060', ord("\x08")), nzTpIcepk0o8('\060' + '\157' + '\x32' + '\x35' + chr(0b110000), 0o10), nzTpIcepk0o8('\060' + '\157' + '\x31' + '\x32' + chr(800 - 750), ord("\x08"))][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(0b110000) + chr(0b1101111) + '\065' + '\x30', ord("\x08"))] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'\xdc'), '\144' + chr(0b110111 + 0o56) + chr(0b1100011) + chr(111) + '\144' + '\x65')('\165' + chr(10128 - 10012) + '\x66' + '\x2d' + '\x38') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def hGmJ1LjhKyXc(TRsEnjL8YDa6): TRsEnjL8YDa6 = roI3spqORKae(ES5oEprVxulp(b'\xf8'), chr(0b1100100) + chr(7360 - 7259) + '\x63' + '\157' + chr(0b100000 + 0o104) + chr(0b111100 + 0o51))(chr(117) + chr(0b10011 + 0o141) + '\146' + chr(45) + '\x38').Y4yM9BcfTCNq((roI3spqORKae(ES5oEprVxulp(b'\xd1C'), '\144' + chr(6358 - 6257) + '\143' + chr(111) + '\144' + chr(6651 - 6550))('\x75' + chr(0b1110100 + 0o0) + chr(0b1100110) + chr(0b101101) + chr(56)) + ffiOpFBWGmZU.rstrip() for ffiOpFBWGmZU in TRsEnjL8YDa6.splitlines())) return TRsEnjL8YDa6
rossant/ipymd
ipymd/lib/markdown.py
_filter_markdown
def _filter_markdown(source, filters): """Only keep some Markdown headers from a Markdown string.""" lines = source.splitlines() # Filters is a list of 'hN' strings where 1 <= N <= 6. headers = [_replace_header_filter(filter) for filter in filters] lines = [line for line in lines if line.startswith(tuple(headers))] return '\n'.join(lines)
python
def _filter_markdown(source, filters): """Only keep some Markdown headers from a Markdown string.""" lines = source.splitlines() # Filters is a list of 'hN' strings where 1 <= N <= 6. headers = [_replace_header_filter(filter) for filter in filters] lines = [line for line in lines if line.startswith(tuple(headers))] return '\n'.join(lines)
[ "def", "_filter_markdown", "(", "source", ",", "filters", ")", ":", "lines", "=", "source", ".", "splitlines", "(", ")", "# Filters is a list of 'hN' strings where 1 <= N <= 6.", "headers", "=", "[", "_replace_header_filter", "(", "filter", ")", "for", "filter", "in", "filters", "]", "lines", "=", "[", "line", "for", "line", "in", "lines", "if", "line", ".", "startswith", "(", "tuple", "(", "headers", ")", ")", "]", "return", "'\\n'", ".", "join", "(", "lines", ")" ]
Only keep some Markdown headers from a Markdown string.
[ "Only", "keep", "some", "Markdown", "headers", "from", "a", "Markdown", "string", "." ]
d87c9ebc59d67fe78b0139ee00e0e5307682e303
https://github.com/rossant/ipymd/blob/d87c9ebc59d67fe78b0139ee00e0e5307682e303/ipymd/lib/markdown.py#L647-L653
train
Only keep some Markdown headers from a Markdown string.
GiP5xwVCF98Z,B3LV8Eo811Ma,bIsJhlpYrrU2,UtiWT6f6p9yZ,sY2ClS3bs_Vs,cXy7eDEmqBLX,WBIJpxagI_Bm,oiYQtqKByLVy,pKtZbyLPTF7M,N5KuUvtbiyqB,Y8CO_HpFZe1H,lFpHwHL3xiEO,QT_5wdIFQ3WX,gn988v5t9NEf,dVZxwLTOCtbO,RjQP07DYIdkf,Wun5u3i1rn23,m64e4RQAlmFd,zfo2Sgkz3IVJ,aWb0eXvJHTT7,s2y8nAB4S7UF,znAfcqx_89tO,ZnHlCcECsuOK,TdYHRT1SBW60,mBmBrDJUSN6g,Awc2QmWaiVq8,fPFTJxVnGShv,Kqv3Zaj1M9P0,uKsHT175xV8E,ah0DLMBSEU5j,EsFcqWRT9elq,d9st0HqZDng1,knUxyjfq07F9,Fc8q2OvvlH7d,KSw3AkHkJy1a,JD7LadPikpPw,VwkB9reRDydR,aHxuT4bIDdeg,Qn0k4xGfJpuL,NfwEQ1VKf5DV,WdoB9EK8ABTr,Y1otPTwLRJvi,zsedrPqY_EmW,CJFGX4uBWMak,DB9Ra8FNEf7o,DHq8A6v2Wg4n,Migy1gLCcYvQ,IAGRfZDRyjN_,ze1AhR_jfpze,ej204HIOxzoZ,_1qUu0gKi9gH,Wa8JM2k53wi5,aFaxROHyT7UJ,ZOdpVDJPWn4I,LqOf4dRsAg72,K3alqetBMgas,ZtIuyIq3ta7g,UIHY5MV5X5uS,C60ELahXqfKV,FB4_7GjVy3pW,wXIYU_4UfQFa,jZIjKu8IFANs,REazVyvp6OIp,pZy5DBJ8WJod,aP29ipGsOVzf,YikXQdxs3VoO,UBvEeZympYSz,mRTjFWUmjlQA,QhZRiM1qvaW7,WbNHlDKpyPtQ,z18h6aCn31dg,oxjHmqoBrCHG,GA4ANb_Tki5v,LdFlJR2ssk3y,gCu7Qd75URN1,yfEeqQiUoqWT,zGgTE_CdZfvi,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2,zQBGwUT7UU8L,DvlSWc3qeAuL,qX60lO1lgHA5,ZQUt7vS8_3kI,VF4pKOObtlPc,D6JeCyjJUA8O,fBqfYi7uj_uC,TVUhqOt5_BbS,WtdkIpFeYozM,MdkNqd1bagO6,QNQS9e6tJqMV,typojWN5Phrq,gufQJgTAhMnI,uPAcezIXzQNA,i739myaCTbWD,AtYHTsImz86v,pWZq9QOaZbhU,lI5UiuqoXdKZ,qZ4DivK_Doaa,znjnJWK64FDT,iJbw0iNQ06Xw,Jq33HEV_XqZE,_kV_Bomx8PZ4,Z5xOfqIptFuc,_9cznYtBZk6k,ZurjcUL1ssA8,qEahrGEDF7Tq,jLW6pRf2DSRk,q33KG3foQ_CJ,PNaRkv8AjHWU,roI3spqORKae,CFUos7dinCa7,dRKdVnHPFq7C,dMJNtLk2mncQ,Mq8h41ilRngb,vgO67Nkl7Kt9,maLnLg8O5zPT,QnTXOd5N96r1,nzTpIcepk0o8,suIjIS24Zkqw,CmsH_0IVxIiZ,b8MSkfijeeBr,ftfygxgFas5X,xM0vTMWcJQBa,H4NoA26ON7iG,y0cCpS6dh4OT,VVP82lOIz6CD,KV9ckIhroIia,D2M3XQk26HKr,XURpmPuEWCNF,ltB3XhPy2rYf,mxgO6GAb3Xup,llEg6op6Lr8F,DnU3Rq9N5ala,RmKXV0QRcrJP,JEroPXRTriYU,v8jsMqaYV6U2,X1QyyvXSAOQt,PWTqT_PKIfuW,bbT2xIe5pzk7,VWshwTzZfwvC,DoS4vLAglV8A,sOS7b2Ofrbne,Bvi71nNyvlqO,lCf1uzpaIUMv,nDEnDEV3Lc5Z,V3OlOVg98A85,WsP3Nc3n6e0b,N9zlRy29S1SS,oclC8DLjA_lV,CO2YiXoIEhJY,nfNqtJL5aRaY,MJ07XsN5uFgW,cL4sFo6RhVJa,TxMFWa_Xzviv,bpTSxj4JFQ8o,zL_YcxPEZPhm,yfEeqQiUoqWT,OHWDi_URd_WF,NKGkaWkPPkT2,AYtDRlqeP0tq,vQqJeSQfHM0X,FUdwyfT9sfj2=ArithmeticError,AssertionError,AttributeError,BaseException,BlockingIOError,BrokenPipeError,BufferError,BytesWarning,ChildProcessError,ConnectionAbortedError,ConnectionError,ConnectionRefusedError,ConnectionResetError,DeprecationWarning,EOFError,Ellipsis,EncodingWarning,EnvironmentError,Exception,False,FileExistsError,FileNotFoundError,FloatingPointError,FutureWarning,GeneratorExit,IOError,ImportError,ImportWarning,IndentationError,IndexError,InterruptedError,IsADirectoryError,KeyError,KeyboardInterrupt,LookupError,MemoryError,ModuleNotFoundError,NameError,None,NotADirectoryError,NotImplemented,NotImplementedError,OSError,OverflowError,PendingDeprecationWarning,PermissionError,ProcessLookupError,RecursionError,ReferenceError,ResourceWarning,RuntimeError,RuntimeWarning,StopAsyncIteration,StopIteration,SyntaxError,SyntaxWarning,SystemError,SystemExit,TabError,TimeoutError,True,TypeError,UnboundLocalError,UnicodeDecodeError,UnicodeEncodeError,UnicodeError,UnicodeTranslateError,UnicodeWarning,UserWarning,ValueError,Warning,WindowsError,ZeroDivisionError,__build_class__,__debug__,__doc__,__import__,__loader__,__name__,__package__,__spec__,abs,aiter,all,anext,any,ascii,bin,bool,breakpoint,bytearray,bytes,callable,chr,classmethod,compile,complex,copyright,credits,delattr,dict,dir,divmod,enumerate,eval,exec,exit,filter,float,format,frozenset,getattr,globals,hasattr,hash,help,hex,id,input,int,isinstance,issubclass,iter,len,license,list,locals,map,max,memoryview,min,next,object,oct,open,ord,pow,print,property,quit,range,repr,reversed,round,set,setattr,slice,sorted,staticmethod,str,sum,super,tuple,type,vars,zip,__builtins__,__cached__,__doc__,__file__,__loader__,__name__,__package__,__spec__ ES5oEprVxulp = lambda R7ltlgvcKSD4: QNQS9e6tJqMV([bI5jsQ9OkQtj ^ [nzTpIcepk0o8('\x30' + chr(0b1000001 + 0o56) + chr(0b1001 + 0o50) + '\064' + '\x31', ord("\x08")), nzTpIcepk0o8(chr(1026 - 978) + chr(111) + '\062' + chr(50) + chr(0b110010), ord("\x08")), nzTpIcepk0o8('\x30' + chr(1845 - 1734) + chr(270 - 218) + chr(0b11000 + 0o33), 0o10), nzTpIcepk0o8('\x30' + '\157' + chr(50) + '\063' + chr(429 - 374), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(50) + chr(0b10000 + 0o46) + chr(2585 - 2532), 0o10), nzTpIcepk0o8(chr(48) + chr(0b1001 + 0o146) + chr(0b100110 + 0o13) + chr(0b1101 + 0o43) + '\x36', 0b1000), nzTpIcepk0o8('\x30' + chr(111) + chr(2093 - 2041), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(0b1101111) + chr(49) + '\x36' + chr(50), 0b1000), nzTpIcepk0o8('\060' + chr(0b1101111) + chr(0b110011) + chr(0b110101) + chr(0b110010), ord("\x08")), nzTpIcepk0o8(chr(0b110000) + chr(0b1000 + 0o147) + '\x35' + chr(0b101110 + 0o4), ord("\x08")), nzTpIcepk0o8('\060' + '\x6f' + chr(50) + chr(880 - 831) + chr(52), ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + chr(0b11 + 0o56) + chr(152 - 98) + chr(0b110111), 0b1000), nzTpIcepk0o8('\060' + '\157' + '\x33' + '\x37' + chr(0b110100), 0b1000), nzTpIcepk0o8('\060' + chr(111) + chr(0b110001) + '\066' + '\x30', ord("\x08")), nzTpIcepk0o8(chr(1137 - 1089) + '\x6f' + chr(0b101100 + 0o6) + '\x33' + chr(51), 0b1000), nzTpIcepk0o8('\060' + '\157' + chr(2739 - 2686) + '\x31', ord("\x08")), nzTpIcepk0o8('\060' + chr(111) + chr(0b110001 + 0o2) + chr(762 - 713) + chr(50), 0o10), nzTpIcepk0o8('\060' + chr(111) + chr(0b11101 + 0o24) + chr(0b10000 + 0o41) + chr(51), 0b1000), nzTpIcepk0o8('\x30' + chr(0b1101111) + '\x31' + chr(0b110001 + 0o0) + chr(0b110011), 8), nzTpIcepk0o8(chr(0b11111 + 0o21) + chr(9678 - 9567) + '\x34' + '\x35', 46708 - 46700), nzTpIcepk0o8(chr(1079 - 1031) + chr(0b100101 + 0o112) + '\x31' + chr(0b11011 + 0o31) + chr(0b110111), ord("\x08")), nzTpIcepk0o8(chr(1689 - 1641) + chr(0b1011011 + 0o24) + chr(1992 - 1943) + chr(0b110111) + chr(115 - 62), 26101 - 26093), nzTpIcepk0o8('\060' + '\157' + chr(0b110010) + '\067' + chr(0b110001), 58966 - 58958), nzTpIcepk0o8(chr(0b111 + 0o51) + chr(0b111100 + 0o63) + '\067' + chr(51), 0o10), nzTpIcepk0o8(chr(0b11110 + 0o22) + '\157' + '\061' + chr(0b110101) + '\061', 0b1000), nzTpIcepk0o8('\x30' + chr(111) + '\067' + chr(0b110111), 0b1000), nzTpIcepk0o8('\x30' + chr(0b111111 + 0o60) + chr(0b110111) + '\065', ord("\x08")), nzTpIcepk0o8(chr(0b110000) + '\157' + chr(0b10011 + 0o36) + chr(0b110000 + 0o6) + chr(2297 - 2249), 8), nzTpIcepk0o8(chr(0b110000) + '\x6f' + chr(0b110111) + '\x31', 0o10), nzTpIcepk0o8(chr(0b10100 + 0o34) + chr(0b1101111) + chr(1235 - 1185) + chr(0b110100) + chr(53), 21273 - 21265), nzTpIcepk0o8(chr(48) + chr(6950 - 6839) + '\x31' + chr(0b100001 + 0o25) + '\x33', 29816 - 29808), nzTpIcepk0o8(chr(1728 - 1680) + chr(9587 - 9476) + '\062' + chr(548 - 496) + '\x37', ord("\x08")), nzTpIcepk0o8(chr(48) + chr(111) + '\063' + chr(0b110111) + chr(0b10100 + 0o35), 0o10), nzTpIcepk0o8('\060' + '\x6f' + '\063' + chr(48) + '\x37', 49988 - 49980), nzTpIcepk0o8(chr(48) + '\x6f' + chr(2200 - 2150) + chr(0b1101 + 0o47) + '\061', 0b1000), nzTpIcepk0o8('\060' + '\x6f' + chr(49) + '\x31' + '\x30', ord("\x08")), nzTpIcepk0o8(chr(2213 - 2165) + '\157' + chr(0b110110) + chr(51), ord("\x08")), nzTpIcepk0o8(chr(0b100 + 0o54) + chr(0b1101111) + chr(0b110001) + '\066' + chr(0b10010 + 0o43), 57197 - 57189), nzTpIcepk0o8(chr(0b110000) + chr(0b101 + 0o152) + chr(0b110001) + chr(0b1101 + 0o50) + '\x30', 0o10), nzTpIcepk0o8(chr(403 - 355) + '\x6f' + '\x31' + chr(0b110110) + chr(0b11111 + 0o30), 8)][ZlbFMSG8gCoF % nzTpIcepk0o8(chr(48) + chr(111) + chr(53) + chr(48), 0b1000)] for (ZlbFMSG8gCoF, bI5jsQ9OkQtj) in _kV_Bomx8PZ4(R7ltlgvcKSD4)]) def rFFUeiYWzOhx(pOp6HxxfV61L, pXRQUD7VR93J): try: return zGgTE_CdZfvi(pOp6HxxfV61L + roI3spqORKae(ES5oEprVxulp(b'O'), chr(9321 - 9221) + '\145' + chr(0b1100011) + '\157' + '\144' + chr(0b1000 + 0o135))(chr(0b1110101) + '\x74' + chr(3755 - 3653) + chr(1722 - 1677) + '\070') + pXRQUD7VR93J) except fPFTJxVnGShv: return zGgTE_CdZfvi(pOp6HxxfV61L) def ZTYqrjmkzj6e(TRsEnjL8YDa6, jDRJWNV63hGm): vniSnlI09HNg = TRsEnjL8YDa6.splitlines() UyworZfslHjc = [dhRnrpKjZc00(qEahrGEDF7Tq) for qEahrGEDF7Tq in jDRJWNV63hGm] vniSnlI09HNg = [ffiOpFBWGmZU for ffiOpFBWGmZU in vniSnlI09HNg if ffiOpFBWGmZU.startswith(nfNqtJL5aRaY(UyworZfslHjc))] return roI3spqORKae(roI3spqORKae(ES5oEprVxulp(b'k'), '\x64' + chr(0b111000 + 0o55) + '\143' + '\x6f' + chr(100) + chr(7195 - 7094))('\x75' + chr(0b1110100) + '\x66' + '\x2d' + '\x38'), roI3spqORKae(ES5oEprVxulp(b'8\xa6Z\xd2\x8c\x04g\x14\xbei\xc2\x06'), chr(0b1100100) + '\145' + '\143' + chr(5040 - 4929) + chr(100) + chr(0b1100101))(chr(0b1000000 + 0o65) + '\x74' + chr(0b1100110) + chr(1690 - 1645) + '\x38'))(vniSnlI09HNg)