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np.max(np.abs(values["enclosed_mass"] - enclosed_direct)) / max(1e-12, float(np.max(np.abs(enclosed_direct))))
)
assert abs(values["enclosed_mass"][0]) < 1e-10
assert enclosed_relative_linf < 8e-4
metrics = independent_profile_metrics(
radial,
values["psi"],
values["dpsi"],
values["phi"],
beta,
float(row["chemical_potential"]),
)
assert abs(metrics["mass"] - float(row["mass"])) < 3e-4 * max(1.0, metrics["mass"])
assert abs(metrics["kinetic"] - float(row["kinetic_energy"])) < 5e-4 * max(1.0, abs(metrics["kinetic"]))
assert abs(metrics["contact"] - float(row["contact_energy"])) < 8e-4 * max(1.0, abs(metrics["contact"]))
assert abs(metrics["gravitational"] - float(row["gravitational_energy"])) < 8e-4 * max(1.0, abs(metrics["gravitational"]))
assert metrics["stationary_residual"] < 7e-4
assert metrics["virial_residual"] < 7e-4
assert metrics["potential_error"] < 0.012
assert metrics["equation_relative_l2"] < 0.02
assert abs(metrics["stationary_residual"] - float(row["stationary_identity_residual"])) < 5e-6
assert abs(metrics["virial_residual"] - float(row["virial_residual"])) < 5e-6
> assert abs(metrics["potential_error"] - float(row["green_potential_residual"])) < 5e-6
E AssertionError: assert 0.0001014939664389449 < 5e-06
E + where 0.0001014939664389449 = abs((0.00011507970933117526 - 1.3585742892230357e-05))
E + where 1.3585742892230357e-05 = float('1.3585742892230357e-05')
/verifier/test_outputs.py:240: AssertionError
_________________ test_public_spectrum_turning_and_convergence _________________
public_instance = {'boundary_value': {'initial_mesh_points': 560, 'max_nodes': 36000, 'origin_fraction': 2.5e-06, 'tolerance': 2e-07}, '..., 'profile_anchor_count': 2, 'refined_tolerance_factor': 0.35}, 'domain': {'profile_points': 801, 'radius': 40.0}, ...}
public_branch = [{'bvp_max_rms_residual': '1.9608649894794986e-07', 'bvp_mesh_nodes': '629', 'central_amplitude': '0.18', 'chemical_po...645e-07', 'bvp_mesh_nodes': '708', 'central_amplitude': '0.52', 'chemical_potential': '-0.9196231268316275', ...}, ...]
public_spectrum = [{'basis_size': '64', 'central_amplitude': '0.18', 'family_id': 'ground', 'growth_rate': '0.0', ...}, {'basis_size': '...: '0.0', ...}, {'basis_size': '80', 'central_amplitude': '0.4', 'family_id': 'ground', 'growth_rate': '0.0', ...}, ...]
def test_public_spectrum_turning_and_convergence(
public_instance: dict[str, Any],
public_branch: list[dict[str, str]],
public_spectrum: list[dict[str, str]],
) -> None:
basis_sizes = public_instance["stability"]["basis_sizes"]
assert len(public_spectrum) == len(public_branch) * len(basis_sizes)
with np.load(RESULTS / "spectra.npz", allow_pickle=False) as arrays:
for branch_row in public_branch:
rows = [
row
for row in public_spectrum
if row["family_id"] == branch_row["family_id"] and int(row["state_index"]) == int(branch_row["state_index"])
]
rows.sort(key=lambda row: int(row["basis_size"]))
assert [int(row["basis_size"]) for row in rows] == basis_sizes
assert rows[0]["stability"] == rows[1]["stability"]
for row in rows:
assert row["stability"] in {"stable", "unstable"}
assert float(row["growth_rate"]) >= 0.0
assert int(row["unstable_mode_count"]) >= 0
> assert float(row["spectral_symmetry_residual"]) < public_instance["stability"]["symmetry_tolerance"]
E AssertionError: assert 0.20610306484149316 < 0.02
E + where 0.20610306484149316 = float('0.20610306484149316')
/verifier/test_outputs.py:945: AssertionError
______________________ test_hidden_changed_family_replay _______________________
hidden_run = ({'boundary_value': {'initial_mesh_points': 480, 'max_nodes': 42000, 'origin_fraction': 3e-06, 'tolerance': 4e-07}, 'c...401, 'radius': 36.0}, ...}, PosixPath('/tmp/sn-verifier-cases/hidden-replay-cbd9f5db12134246bb4f6470e2c1a7da/results'))
public_instance = {'boundary_value': {'initial_mesh_points': 560, 'max_nodes': 36000, 'origin_fraction': 2.5e-06, 'tolerance': 2e-07}, '..., 'profile_anchor_count': 2, 'refined_tolerance_factor': 0.35}, 'domain': {'profile_points': 801, 'radius': 40.0}, ...}
def test_hidden_changed_family_replay(hidden_run: tuple[dict[str, Any], Path], public_instance: dict[str, Any]) -> None:
instance, output_path = hidden_run
assert instance["domain"] != public_instance["domain"]
assert instance["boundary_value"]["initial_mesh_points"] != public_instance["boundary_value"]["initial_mesh_points"]
assert instance["stability"]["basis_sizes"] != public_instance["stability"]["basis_sizes"]
assert instance["continuation"]["families"][0]["node_count"] == 2
assert instance["continuation"]["families"][0]["amplitudes"] != public_instance["continuation"]["families"][0]["amplitudes"]
assert {path.name for path in output_path.iterdir()} == REQUIRED_ARTIFACTS
assert all(path.is_file() and not path.is_symlink() for path in output_path.iterdir())
hidden_manifest = load_json(output_path / "manifest.json")
> assert hidden_manifest["completed"] is True
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
E KeyError: 'completed'
/verifier/test_outputs.py:983: KeyError
______________________ test_malformed_inputs_fail_closed _______________________
def test_malformed_inputs_fail_closed() -> None:
invalid_basis = hidden_instance()
invalid_basis["stability"]["basis_sizes"] = [68, 52]
> completed, output_path = run_unprivileged_solver(invalid_basis, "invalid-basis", timeout=45)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/verifier/test_outputs.py:1038:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
/verifier/test_outputs.py:320: in run_unprivileged_solver
completed = subprocess.run(command, cwd=case_path, text=True, capture_output=True, timeout=timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/lib/python3.12/subprocess.py:550: in run
stdout, stderr = process.communicate(input, timeout=timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/lib/python3.12/subprocess.py:1209: in communicate
stdout, stderr = self._communicate(input, endtime, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/lib/python3.12/subprocess.py:2116: in _communicate