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benchflow
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frontierphysics-pr152-evidence

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/verifier/test_outputs.py:1050:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
/verifier/test_outputs.py:320: in run_unprivileged_solver
completed = subprocess.run(command, cwd=case_path, text=True, capture_output=True, timeout=timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/lib/python3.12/subprocess.py:550: in run
stdout, stderr = process.communicate(input, timeout=timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/lib/python3.12/subprocess.py:1209: in communicate
stdout, stderr = self._communicate(input, endtime, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/lib/python3.12/subprocess.py:2116: in _communicate
self._check_timeout(endtime, orig_timeout, stdout, stderr)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <Popen: returncode: -9 args: ['setpriv', '--reuid=65534', '--regid=65534', '...>
endtime = 15597049.209686711, orig_timeout = 45, stdout_seq = []
stderr_seq = [], skip_check_and_raise = False
def _check_timeout(self, endtime, orig_timeout, stdout_seq, stderr_seq,
skip_check_and_raise=False):
"""Convenience for checking if a timeout has expired."""
if endtime is None:
return
if skip_check_and_raise or _time() > endtime:
> raise TimeoutExpired(
self.args, orig_timeout,
output=b''.join(stdout_seq) if stdout_seq else None,
stderr=b''.join(stderr_seq) if stderr_seq else None)
E subprocess.TimeoutExpired: Command '['setpriv', '--reuid=65534', '--regid=65534', '--clear-groups', 'env', '-i', 'HOME=/tmp/sn-verifier-cases/invalid-grid-beaf10b311004bf0a22f808a0a4af873', 'PATH=/usr/local/bin:/usr/bin:/bin', 'PYTHONNOUSERSITE=1', 'PYTHONHASHSEED=0', 'python3', '-I', '/tmp/agent-submission...
/usr/local/lib/python3.12/subprocess.py:1253: TimeoutExpired
==================================== PASSES ====================================
=========================== short test summary info ============================
PASSED ::test_hidden_independent_finite_difference_spectrum
FAILED ::test_artifacts_manifest_and_input_integrity - KeyError: 'completed'
FAILED ::test_public_branch_physics - AssertionError: assert 0.00014058906954...
FAILED ::test_public_profiles_independent - AssertionError: assert 5.64791418...
FAILED ::test_public_spectrum_turning_and_convergence - KeyError: 'bracketing...
FAILED ::test_hidden_changed_family_replay - KeyError: 'completed'
FAILED ::test_malformed_inputs_fail_closed - subprocess.TimeoutExpired: Comma...
=================== 6 failed, 1 passed in 134.68s (0:02:14) ====================
============================= test session starts ==============================
platform linux -- Python 3.12.13, pytest-8.4.1, pluggy-1.6.0 -- /usr/local/bin/python3
rootdir: /app
configfile: ../dev/null
plugins: json-ctrf-0.3.5
collecting ... collected 7 items
::test_artifacts_manifest_and_input_integrity FAILED [ 14%]
::test_public_branch_physics FAILED [ 28%]
::test_public_profiles_independent FAILED [ 42%]
::test_public_spectrum_turning_and_convergence FAILED [ 57%]
::test_hidden_changed_family_replay FAILED [ 71%]
::test_hidden_independent_finite_difference_spectrum FAILED [ 85%]
::test_malformed_inputs_fail_closed FAILED [100%]
=================================== FAILURES ===================================
_________________ test_artifacts_manifest_and_input_integrity __________________
public_instance = {'boundary_value': {'initial_mesh_points': 560, 'max_nodes': 36000, 'origin_fraction': 2.5e-06, 'tolerance': 2e-07}, '..., 'profile_anchor_count': 2, 'refined_tolerance_factor': 0.35}, 'domain': {'profile_points': 801, 'radius': 40.0}, ...}
def test_artifacts_manifest_and_input_integrity(public_instance: dict[str, Any]) -> None:
assert {path.name for path in RESULTS.iterdir()} == REQUIRED_ARTIFACTS
assert all(path.is_file() and not path.is_symlink() for path in RESULTS.iterdir())
manifest = load_json(RESULTS / "manifest.json")
assert manifest["schema_version"] == RESULT_SCHEMA
> assert manifest["completed"] is True
^^^^^^^^^^^^^^^^^^^^^
E KeyError: 'completed'
/verifier/test_outputs.py:861: KeyError
__________________________ test_public_branch_physics __________________________
public_instance = {'boundary_value': {'initial_mesh_points': 560, 'max_nodes': 36000, 'origin_fraction': 2.5e-06, 'tolerance': 2e-07}, '..., 'profile_anchor_count': 2, 'refined_tolerance_factor': 0.35}, 'domain': {'profile_points': 801, 'radius': 40.0}, ...}
public_branch = [{'bvp_max_rms_residual': '1.980331718205929e-07', 'bvp_mesh_nodes': '731', 'central_amplitude': '0.18', 'chemical_pot...9237e-07', 'bvp_mesh_nodes': '860', 'central_amplitude': '0.52', 'chemical_potential': '-0.919623141119883', ...}, ...]
def test_public_branch_physics(public_instance: dict[str, Any], public_branch: list[dict[str, str]]) -> None:
expected_rows = sum(len(family["amplitudes"]) for family in public_instance["continuation"]["families"])
assert len(public_branch) == expected_rows
evidence = []
for family in public_instance["continuation"]["families"]:
rows = rows_by_family(public_branch, family["family_id"])
assert [int(row["state_index"]) for row in rows] == list(range(len(rows)))
assert np.max(np.abs(np.array([float(row["central_amplitude"]) for row in rows]) - np.array(family["amplitudes"]))) < 1e-12
assert all(int(row["node_count"]) == family["node_count"] for row in rows)
masses = np.array([float(row["mass"]) for row in rows])
maximum_index = int(np.argmax(masses))
assert 0 < maximum_index < len(masses) - 1
margin = float(public_instance["convergence"]["minimum_mass_turning_margin"])
assert masses[maximum_index] - masses[maximum_index - 1] > margin
assert masses[maximum_index] - masses[maximum_index + 1] > margin
for row in rows:
numeric = [float(value) for key, value in row.items() if key not in {"family_id"}]
assert np.all(np.isfinite(numeric))
assert int(row["observed_node_count"]) == family["node_count"]
assert float(row["mass"]) > 0.0
assert float(row["chemical_potential"]) < 0.0
assert abs(
float(row["total_energy"]) - sum(float(row[key]) for key in ("kinetic_energy", "contact_energy", "gravitational_energy"))