text stringclasses 308
values |
|---|
test_outputs.py:1425: in staged_submitted_execution |
assert_regular_file( |
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ |
path = PosixPath('/root/analyze_protein_strain.py') |
description = 'reusable /root/analyze_protein_strain.py' |
def assert_regular_file(path: Path, description: str) -> os.stat_result: |
> assert path.exists(), f"Missing {description}: {path}" |
E AssertionError: Missing reusable /root/analyze_protein_strain.py: /root/analyze_protein_strain.py |
E assert False |
E + where False = exists() |
E + where exists = PosixPath('/root/analyze_protein_strain.py').exists |
test_outputs.py:147: AssertionError |
________ test_submitted_executable_handles_compact_full_rank_transition ________ |
def test_submitted_executable_handles_compact_full_rank_transition() -> None: |
fixture, metadata = compact_full_rank_fixture() |
public = input_data() |
assert int(metadata["residue_count"]) == 80 |
assert int(metadata["residue_count"]) != np.asarray(public["residue_key"]).size |
assert {str(value) for value in fixture["residue_key"]}.isdisjoint(str(value) for value in public["residue_key"]) |
assert {str(value) for value in fixture["segment_key"]}.isdisjoint(str(value) for value in public["segment_key"]) |
LOGS.mkdir(parents=True, exist_ok=True) |
(LOGS / "compact-full-rank-fixture.json").write_text( |
json.dumps(metadata, indent=2, sort_keys=True) + "\n", |
encoding="utf-8", |
) |
> artifacts, hidden_reference, hidden_nonaffine = run_submitted_executable( |
fixture, |
COMPACT_FULL_RANK_RADIUS, |
"compact-full-rank", |
) |
test_outputs.py:1881: |
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ |
test_outputs.py:1546: in run_submitted_executable |
with staged_submitted_execution( |
/usr/local/lib/python3.11/contextlib.py:137: in __enter__ |
return next(self.gen) |
^^^^^^^^^^^^^^ |
test_outputs.py:1425: in staged_submitted_execution |
assert_regular_file( |
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ |
path = PosixPath('/root/analyze_protein_strain.py') |
description = 'reusable /root/analyze_protein_strain.py' |
def assert_regular_file(path: Path, description: str) -> os.stat_result: |
> assert path.exists(), f"Missing {description}: {path}" |
E AssertionError: Missing reusable /root/analyze_protein_strain.py: /root/analyze_protein_strain.py |
E assert False |
E + where False = exists() |
E + where exists = PosixPath('/root/analyze_protein_strain.py').exists |
test_outputs.py:147: AssertionError |
______________ test_public_shape_and_key_special_case_is_rejected ______________ |
def test_public_shape_and_key_special_case_is_rejected() -> None: |
fixture, _ = compact_full_rank_fixture() |
> attack_source, public_count, public_key_digest = public_only_special_case_solver_source() |
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
test_outputs.py:1911: |
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ |
test_outputs.py:1604: in public_only_special_case_solver_source |
submitted_source = SCRIPT_PATH.read_text(encoding="utf-8") |
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
/usr/local/lib/python3.11/pathlib.py:1058: in read_text |
with self.open(mode='r', encoding=encoding, errors=errors) as f: |
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ |
self = PosixPath('/root/analyze_protein_strain.py'), mode = 'r', buffering = -1 |
encoding = 'utf-8', errors = None, newline = None |
def open(self, mode='r', buffering=-1, encoding=None, |
errors=None, newline=None): |
""" |
Open the file pointed by this path and return a file object, as |
the built-in open() function does. |
""" |
if "b" not in mode: |
encoding = io.text_encoding(encoding) |
> return io.open(self, mode, buffering, encoding, errors, newline) |
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
E FileNotFoundError: [Errno 2] No such file or directory: '/root/analyze_protein_strain.py' |
/usr/local/lib/python3.11/pathlib.py:1044: FileNotFoundError |
____________ test_submitted_executable_rejects_rank_deficient_input ____________ |
def test_submitted_executable_rejects_rank_deficient_input() -> None: |
state_a = np.asarray( |
[ |
[0.0, 0.0, 0.0], |
[1.0, 0.0, 0.0], |
[0.0, 1.0, 0.0], |
[1.0, 1.0, 0.0], |
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