name stringlengths 2 64 | description stringlengths 3 1.02k ⌀ | source stringclasses 6
values | path stringclasses 198
values | url stringlengths 29 246 | author stringlengths 2 33 ⌀ |
|---|---|---|---|---|---|
arboreto | Gene regulatory network inference with GRNBoost2/GENIE3 algorithms. Infer TF-target relationships from expression data, scalable with Dask, for scRNA-seq and GRN analysis. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/bioinformatics/arboreto | lifangda |
biopython | Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence manipulation, file parsing (FASTA, GenBank, FASTQ, PDB), advanced BLAST workflows, structures, phylogenetics. For quick BLAST, use gget. For direct REST API, use pubmed-database. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/bioinformatics/biopython | lifangda |
bioservices | Primary Python tool for 40+ bioinformatics services. Preferred for multi-database workflows: UniProt, KEGG, ChEMBL, PubChem, Reactome, QuickGO. Unified API for queries, ID mapping, pathway analysis. For direct REST control, use individual database skills (uniprot-database, kegg-database). | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/bioinformatics/bioservices | lifangda |
cellxgene-census | Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, integrate with scanpy/PyTorch, for population-scale single-cell analysis. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/bioinformatics/cellxgene-census | lifangda |
deeptools | NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/bioinformatics/deeptools | lifangda |
flowio | Parse FCS (Flow Cytometry Standard) files v2.0-3.1. Extract events as NumPy arrays, read metadata/channels, convert to CSV/DataFrame, for flow cytometry data preprocessing. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/bioinformatics/flowio | lifangda |
gget | CLI/Python toolkit for rapid bioinformatics queries. Preferred for quick BLAST searches. Access to 20+ databases: gene info (Ensembl/UniProt), AlphaFold, ARCHS4, Enrichr, OpenTargets, COSMIC, genome downloads. For advanced BLAST/batch processing, use biopython. For multi-database integration, use bioservices. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/bioinformatics/gget | lifangda |
pydeseq2 | Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/bioinformatics/pydeseq2 | lifangda |
pysam | Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing pipelines. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/bioinformatics/pysam | lifangda |
scvi-tools | This skill should be used when working with single-cell omics data analysis using scvi-tools, including scRNA-seq, scATAC-seq, CITE-seq, spatial transcriptomics, and other single-cell modalities. Use this skill for probabilistic modeling, batch correction, dimensionality reduction, differential expression, cell type an... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/bioinformatics/scvi-tools | lifangda |
datamol | Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery: SMILES parsing, standardization, descriptors, fingerprints, clustering, 3D conformers, parallel processing. Returns native rdkit.Chem.Mol objects. For advanced control or custom parameters, use rdkit di... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/cheminformatics/datamol | lifangda |
deepchem | Molecular machine learning toolkit. Property prediction (ADMET, toxicity), GNNs (GCN, MPNN), MoleculeNet benchmarks, pretrained models, featurization, for drug discovery ML. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/cheminformatics/deepchem | lifangda |
medchem | Medicinal chemistry filters. Apply drug-likeness rules (Lipinski, Veber), PAINS filters, structural alerts, complexity metrics, for compound prioritization and library filtering. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/cheminformatics/medchem | lifangda |
molfeat | Molecular featurization for ML (100+ featurizers). ECFP, MACCS, descriptors, pretrained models (ChemBERTa), convert SMILES to features, for QSAR and molecular ML. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/cheminformatics/molfeat | lifangda |
pytdc | Therapeutics Data Commons. AI-ready drug discovery datasets (ADME, toxicity, DTI), benchmarks, scaffold splits, molecular oracles, for therapeutic ML and pharmacological prediction. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/cheminformatics/pytdc | lifangda |
torchdrug | Graph-based drug discovery toolkit. Molecular property prediction (ADMET), protein modeling, knowledge graph reasoning, molecular generation, retrosynthesis, GNNs (GIN, GAT, SchNet), 40+ datasets, for PyTorch-based ML on molecules, proteins, and biomedical graphs. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/cheminformatics/torchdrug | lifangda |
polars | Fast DataFrame library (Apache Arrow). Select, filter, group_by, joins, lazy evaluation, CSV/Parquet I/O, expression API, for high-performance data analysis workflows. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/data-visualization/polars | lifangda |
reportlab | PDF generation toolkit. Create invoices, reports, certificates, forms, charts, tables, barcodes, QR codes, Canvas/Platypus APIs, for professional document automation. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/data-visualization/reportlab | lifangda |
aeon | Time series machine learning toolkit for classification, regression, clustering, forecasting, anomaly detection, segmentation, and similarity search. Use this skill when working with temporal data, performing time series analysis, building predictive models on sequential data, or implementing workflows that involve dis... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/machine-learning/aeon | lifangda |
pymoo | Multi-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks (ZDT, DTLZ), for engineering design and optimization problems. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/machine-learning/pymoo | lifangda |
scikit-learn | ML toolkit. Classification, regression, clustering, PCA, preprocessing, pipelines, GridSearch, cross-validation, RandomForest, SVM, for general machine learning workflows. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/machine-learning/scikit-learn | lifangda |
shap | Model interpretability and explainability using SHAP (SHapley Additive exPlanations). Use this skill when explaining machine learning model predictions, computing feature importance, generating SHAP plots (waterfall, beeswarm, bar, scatter, force, heatmap), debugging models, analyzing model bias or fairness, comparing ... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/machine-learning/shap | lifangda |
torch-geometric | Graph Neural Networks (PyG). Node/graph classification, link prediction, GCN, GAT, GraphSAGE, heterogeneous graphs, molecular property prediction, for geometric deep learning. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/machine-learning/torch-geometric | lifangda |
transformers | Work with state-of-the-art machine learning models for NLP, computer vision, audio, and multimodal tasks using HuggingFace Transformers. This skill should be used when fine-tuning pre-trained models, performing inference with pipelines, generating text, training sequence models, or working with BERT, GPT, T5, ViT, and ... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/machine-learning/transformers | lifangda |
umap-learn | UMAP dimensionality reduction. Fast nonlinear manifold learning for 2D/3D visualization, clustering preprocessing (HDBSCAN), supervised/parametric UMAP, for high-dimensional data. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/machine-learning/umap-learn | lifangda |
astropy | Astronomy toolkit. FITS I/O, celestial coordinate transforms, cosmology calculations, time systems, WCS, units, astronomical tables, for astronomical data analysis and imaging. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/materials-science/astropy | lifangda |
pymatgen | Materials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project integration, format conversion, for computational materials science. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/materials-science/pymatgen | lifangda |
biomni | Autonomous biomedical AI agent framework for executing complex research tasks across genomics, drug discovery, molecular biology, and clinical analysis. Use this skill when conducting multi-step biomedical research including CRISPR screening design, single-cell RNA-seq analysis, ADMET prediction, GWAS interpretation, r... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/biomni | lifangda |
datacommons-client | Work with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use this skill when working with demographic data, economic indicators, health statistics, environmental data, or any public datasets available through Data Commons. Applicable for querying population statis... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/datacommons-client | lifangda |
esm | Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C (efficient protein embeddings and representations). Use this skill when working with protein sequences, structures, or function prediction; designing novel proteins;... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/esm | lifangda |
etetoolkit | Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/etetoolkit | lifangda |
histolab | Digital pathology image processing toolkit for whole slide images (WSI). Use this skill when working with histopathology slides, processing H&E or IHC stained tissue images, extracting tiles from gigapixel pathology images, detecting tissue regions, segmenting tissue masks, or preparing datasets for computational patho... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/histolab | lifangda |
neurokit2 | Comprehensive biosignal processing toolkit for analyzing physiological data including ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use this skill when processing cardiovascular signals, brain activity, electrodermal responses, respiratory patterns, muscle activity, or eye movements. Applicable for heart rate variabil... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/neurokit2 | lifangda |
pathml | Computational pathology toolkit for analyzing whole-slide images (WSI) and multiparametric imaging data. Use this skill when working with histopathology slides, H&E stained images, multiplex immunofluorescence (CODEX, Vectra), spatial proteomics, nucleus detection/segmentation, tissue graph construction, or training ML... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/pathml | lifangda |
pydicom | Python library for working with DICOM (Digital Imaging and Communications in Medicine) files. Use this skill when reading, writing, or modifying medical imaging data in DICOM format, extracting pixel data from medical images (CT, MRI, X-ray, ultrasound), anonymizing DICOM files, working with DICOM metadata and tags, co... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/pydicom | lifangda |
pyhealth | Comprehensive healthcare AI toolkit for developing, testing, and deploying machine learning models with clinical data. This skill should be used when working with electronic health records (EHR), clinical prediction tasks (mortality, readmission, drug recommendation), medical coding systems (ICD, NDC, ATC), physiologic... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/pyhealth | lifangda |
pylabrobot | Laboratory automation toolkit for controlling liquid handlers, plate readers, pumps, heater shakers, incubators, centrifuges, and analytical equipment. Use this skill when automating laboratory workflows, programming liquid handling robots (Hamilton STAR, Opentrons OT-2, Tecan EVO), integrating lab equipment, managing ... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/pylabrobot | lifangda |
scikit-bio | Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/scikit-bio | lifangda |
tooluniverse | Use this skill when working with scientific research tools and workflows across bioinformatics, cheminformatics, genomics, structural biology, proteomics, and drug discovery. This skill provides access to 600+ scientific tools including machine learning models, datasets, APIs, and analysis packages. Use when searching ... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/tooluniverse | lifangda |
zarr-python | Chunked N-D arrays for cloud storage. Compressed arrays, parallel I/O, S3/GCS integration, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/other-packages/zarr-python | lifangda |
matchms | Mass spectrometry analysis. Process mzML/MGF/MSP, spectral similarity (cosine, modified cosine), metadata harmonization, compound ID, for metabolomics and MS data processing. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/proteomics/matchms | lifangda |
pyopenms | Mass spectrometry toolkit (OpenMS Python). Process mzML/mzXML, peak picking, feature detection, peptide ID, proteomics/metabolomics workflows, for LC-MS/MS analysis. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-computing/proteomics/pyopenms | lifangda |
alphafold-database | Access AlphaFold's 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biology. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/alphafold-database | lifangda |
biorxiv-database | Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/biorxiv-database | lifangda |
chembl-database | Query ChEMBL's bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistry. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/chembl-database | lifangda |
clinpgx-database | Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/clinpgx-database | lifangda |
cosmic-database | Access COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision oncology. Requires authentication. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/cosmic-database | lifangda |
drugbank-database | Access and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should be used when working with pharmaceutical data, drug discovery research, pharmacology studies, drug-drug interaction analy... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/drugbank-database | lifangda |
ensembl-database | Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/ensembl-database | lifangda |
geo-database | Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/geo-database | lifangda |
pdb-database | Access RCSB PDB for 3D protein/nucleic acid structures. Search by text/sequence/structure, download coordinates (PDB/mmCIF), retrieve metadata, for structural biology and drug discovery. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/pdb-database | lifangda |
pubchem-database | Query PubChem via PUG-REST API/PubChemPy (110M+ compounds). Search by name/CID/SMILES, retrieve properties, similarity/substructure searches, bioactivity, for cheminformatics. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/pubchem-database | lifangda |
reactome-database | Query Reactome REST API for pathway analysis, enrichment, gene-pathway mapping, disease pathways, molecular interactions, expression analysis, for systems biology studies. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/reactome-database/reactome-database | lifangda |
uspto-database | Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-databases/uspto-database | lifangda |
get-available-resources | This skill should be used at the start of any computationally intensive scientific task to detect and report available system resources (CPU cores, GPUs, memory, disk space). It creates a JSON file with resource information and strategic recommendations that inform computational approach decisions such as whether to us... | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-helpers/get-available-resources | lifangda |
context-initialization | Always Auto-invoked skill that creates/updates workspace AGENTS.md to instruct the agent to always search for existing skills before attempting any scientific task. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-helpers/scientific-context-initialization | lifangda |
benchling-integration | Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-integrations/benchling-integration | lifangda |
dnanexus-integration | DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-integrations/dnanexus-integration | lifangda |
labarchive-integration | Electronic lab notebook API integration. Access notebooks, manage entries/attachments, backup notebooks, integrate with Protocols.io/Jupyter/REDCap, for programmatic ELN workflows. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-integrations/labarchive-integration | lifangda |
latchbio-integration | Latch platform for bioinformatics workflows. Build pipelines with Latch SDK, @workflow/@task decorators, deploy serverless workflows, LatchFile/LatchDir, Nextflow/Snakemake integration. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-integrations/latchbio-integration | lifangda |
omero-integration | Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-integrations/omero-integration | lifangda |
exploratory-data-analysis | EDA toolkit. Analyze CSV/Excel/JSON/Parquet files, statistical summaries, distributions, correlations, outliers, missing data, visualizations, markdown reports, for data profiling and insights. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/scientific-thinking/exploratory-data-analysis | lifangda |
ship-learn-next | Transform learning content (like YouTube transcripts, articles, tutorials) into actionable implementation plans using the Ship-Learn-Next framework. Use when user wants to turn advice, lessons, or educational content into concrete action steps, reps, or a learning quest. | skillsmp.com | null | https://github.com/lifangda/claude-plugins/tree/main/cli-tool/skills-library/utility-automation/ship-learn-next | lifangda |
advanced-example | Advanced example showing all available metadata fields and complex folder structure | skillsmp.com | null | https://github.com/srprasanna/mcp-skill-hub/tree/main/examples/skills/advanced-example | srprasanna |
intermediate-example | An intermediate example with metadata and examples | skillsmp.com | null | https://github.com/srprasanna/mcp-skill-hub/tree/main/examples/skills/intermediate-example | srprasanna |
minimal-example | A minimal example skill demonstrating the required structure | skillsmp.com | null | https://github.com/srprasanna/mcp-skill-hub/tree/main/examples/skills/minimal-example | srprasanna |
aesthetic-excellence | Use when improving visual quality of existing UI - applies 2025 design principles for hierarchy, spacing systems, color theory, and typography excellence to elevate aesthetic appeal and user experience | skillsmp.com | null | https://github.com/apexscaleai/claude-ui-design-system/tree/main/enhancement/aesthetic-excellence | apexscaleai |
design-system-foundation | Use when starting a new React Native or Next.js project to establish design system foundation - creates design tokens, folder structure, component architecture, and documentation scaffolding for consistent UI development | skillsmp.com | null | https://github.com/apexscaleai/claude-ui-design-system/tree/main/foundation/design-system-foundation | apexscaleai |
design-preset-system | Use when applying or switching design styles across UI components - provides preset design systems with tokens, patterns, and guidelines for different aesthetic approaches from timeless classics to bleeding-edge experimental styles | skillsmp.com | null | https://github.com/apexscaleai/claude-ui-design-system/tree/main/presets/design-preset-system | apexscaleai |
ui-refactoring-workflow | Use when refactoring existing React Native, Next.js, or TypeScript UI code to apply modern design principles and aesthetic excellence - analyzes current implementation, applies design presets, maintains functionality while elevating visual quality | skillsmp.com | null | https://github.com/apexscaleai/claude-ui-design-system/tree/main/refactoring/ui-refactoring-workflow | apexscaleai |
superpowers-google-calendar | Google Calendar automation - events, scheduling, availability, conflict detection | skillsmp.com | null | https://github.com/salmonumbrella/salmon-marketplace/tree/main/skills/google-calendar | salmonumbrella |
google | Google workspace automation - Calendar + Gmail integration | skillsmp.com | null | https://github.com/salmonumbrella/salmon-marketplace/tree/main/skills/google | salmonumbrella |
superpowers-notion | Personal Notion automation - context-efficient, pre-configured databases, auto-assigns DRI/Watch fields | skillsmp.com | null | https://github.com/salmonumbrella/salmon-marketplace/tree/main/skills/superpowers-notion | salmonumbrella |
generating-item-images | Generate AI-powered item images for Mystica game using Gemini with R2-hosted reference images. Use when creating item assets, generating game art, or when user mentions "item image", "generate image", "Mystica items", or "game assets". | skillsmp.com | null | https://github.com/CaptainCrouton89/new-mystica/tree/main/mystica-express/.claude/skills/generate-item-image | CaptainCrouton89 |
wrangler-r2-guide | Manage Cloudflare R2 object storage for file hosting using Wrangler CLI. Use when uploading files to R2, managing buckets, configuring public access, or when user mentions "R2", "Wrangler", "upload to cloud", or "image hosting". | skillsmp.com | null | https://github.com/CaptainCrouton89/new-mystica/tree/main/mystica-express/.claude/skills/wrangler-r2 | CaptainCrouton89 |
daily-pulse | Generates a personalized daily briefing by analyzing Google Calendar events and unread Gmail messages through Pica MCP Server. Use this when users request their daily overview, morning briefing, day's agenda, pulse check, or want to see what's important today. | skillsmp.com | null | https://github.com/picahq/awesome-pica/tree/main/claude-skills/daily-pulse | picahq |
codex | Use when the user asks to run Codex CLI (codex exec, codex resume) or references OpenAI Codex for code analysis, refactoring, or automated editing | skillsmp.com | null | https://github.com/skills-directory/skill-codex | skills-directory |
annotate | Create flexible annotation workflows for AI applications. Contains common tools to explore raw ai agent logs/transcripts, extract out relevant evaluation data, and llm-as-a-judge creation. | skillsmp.com | null | https://github.com/haizelabs/annotate/tree/main/annotate_skill | haizelabs |
cortex | Automatic session tracking and memory system for Claude Code. Activates when working in git repositories to track file changes, commits, and session context. Creates .cortex_log.md (session history), .cortex_status.json (current state), and .cortex_handoff.md (next steps) for session continuity across conversations. Us... | skillsmp.com | null | https://github.com/bacoco/EvolveSkill/tree/main/.claude/skills/cortex | bacoco |
forge | Claude Code skill creation and validation toolkit. Activates when creating new skills, validating skill structure, or packaging skills for distribution. Provides templates, validation scripts (quick_validate.py), initialization tools (init_skill.py), and packaging utilities (package_skill.py). Use when building custom ... | skillsmp.com | null | https://github.com/bacoco/EvolveSkill/tree/main/.claude/skills/forge | bacoco |
mcp-provider | Discovers, validates, and integrates Model Context Protocol (MCP) tools into Claude Code skills. Searches MCP catalogs, scores candidates, generates tool configurations, and optionally sets up Docker runtimes. Use when creating skills that need external MCP tool integration. | skillsmp.com | null | https://github.com/bacoco/EvolveSkill/tree/main/.claude/skills/mcp-provider | bacoco |
synapse | Pattern detection and automatic skill recommendation system. Activates when analyzing Cortex memory files, detecting recurring work patterns, or determining if new skills are needed. Analyzes .cortex_log.md, PRD files, and task lists to identify patterns (API calls, testing, deployment, etc.) appearing 5+ times. Genera... | skillsmp.com | null | https://github.com/bacoco/EvolveSkill/tree/main/.claude/skills/synapse | bacoco |
webflow-code-components | Expert guidance for developing React code components for Webflow. This skill should be used when users are building, troubleshooting, or optimizing React components for import into Webflow Designer, working with Shadow DOM styling, managing component communication, or configuring the Webflow CLI. | skillsmp.com | null | https://github.com/zehfred/webflow-code-components/tree/main/.claude/skills/webflow-code-components | zehfred |
malware-dynamic-analysis | Execute and monitor malware in controlled sandbox environments. Use when you need to observe runtime behavior, capture network traffic, monitor process activity, analyze file/registry changes, or understand actual malware functionality beyond static analysis. Guides safe execution with Procmon, Wireshark, Process Hacke... | skillsmp.com | null | https://github.com/gl0bal01/malware-analysis-claude-skills/tree/main/malware-dynamic-analysis | gl0bal01 |
malware-report-writer | Professional malware analysis report creation for enterprise malware analysis and incident response. Use when the user needs to create, structure, or improve a malware analysis report, write technical documentation for malware samples, create executive summaries, or format IOCs and detection rules for professional deli... | skillsmp.com | null | https://github.com/gl0bal01/malware-analysis-claude-skills/tree/main/malware-report-writer | gl0bal01 |
malware-triage | Systematic malware triage and initial assessment workflow for professional malware analysis. Use when the user needs to perform initial malware assessment, classify samples, determine analysis priority, identify quick indicators, or decide on next analysis steps. Also use for rapid malware identification and threat cla... | skillsmp.com | null | https://github.com/gl0bal01/malware-analysis-claude-skills/tree/main/malware-triage | gl0bal01 |
specialized-file-analyzer | Analyze specialized file types beyond standard PE executables - .NET assemblies, Office macros, PDFs, PowerShell scripts, JavaScript, archives, and Linux ELF binaries. Use when you encounter documents, scripts, or non-Windows executables that require format-specific analysis tools and techniques. | skillsmp.com | null | https://github.com/gl0bal01/malware-analysis-claude-skills/tree/main/specialized-file-analyzer | gl0bal01 |
keep | Session continuity for Keep workflow. Detects resumable work at conversation start. | skillsmp.com | null | https://github.com/lackeyjb/claude-keep/tree/main/skills/keep | lackeyjb |
browser-task-and-automation-and-delegation | 【强制】所有浏览器操作必须使用本技能，禁止在主对话中直接使用 mcp__chrome-devtools 工具。触发关键词：打开/访问/浏览网页、点击/填写/提交表单、截图/快照、性能分析、自动化测试、数据采集/爬取、网络模拟。本技能通过 chrome-devtools-expert agent 执行浏览器操作，避免大量页面快照、截图、网络请求数据污染主对话上下文。 | skillsmp.com | null | https://github.com/727474430/cli-rule-swtich/tree/main/templates/claude/jige/skills/browser-task-and-automation-and-delegation | 727474430 |
bug-diagnose-and-root-cause-and-fix | 【Bug 诊断专用】当遇到程序错误、异常行为、性能问题、功能故障时必须使用本技能。触发关键词：报错、Bug、问题、异常、故障、不工作、诊断、排查、修复。本技能提供系统性根因分析，输出详细诊断报告和可执行修复方案，包含代码位置引用、步骤指导、注意事项。仅提供分析和方案，不直接修改代码。 | skillsmp.com | null | https://github.com/727474430/cli-rule-swtich/tree/main/templates/claude/jige/skills/bug-diagnose-and-root-cause-and-fix | 727474430 |
deep-search-and-insight-synthesize | 【深度调研专用】当需要系统性调研、多产品对比、深度分析、技术选型、趋势分析时必须使用本技能。触发关键词：调研、对比、分析、评估、选型、趋势、综合报告、多源验证。通过 3 层深度搜索（阅读多个网页）+ 多源交叉验证，提供比普通 WebSearch 更全面、更准确的研究结果和深度洞察。禁止用普通搜索工具替代深度调研任务。 | skillsmp.com | null | https://github.com/727474430/cli-rule-swtich/tree/main/templates/claude/jige/skills/deep-search-and-insight-synthesize | 727474430 |
techdoc-search-and-orchestrate | 【强制】所有技术文档查询必须使用本技能，禁止在主对话中直接使用 mcp__context7-mcp 工具。触发关键词：查询/学习/了解某个库或框架的文档、API用法、配置参数、错误解释、版本差异、代码示例、最佳实践。本技能通过 context7-researcher agent 执行查询，避免大量文档内容污染主对话上下文，保持 token 效率。 | skillsmp.com | null | https://github.com/727474430/cli-rule-swtich/tree/main/templates/claude/jige/skills/techdoc-search-and-orchestrate | 727474430 |
use-gemini-for-code-analysis | 【大型代码库分析专用】当需要分析整个项目架构、识别代码模式、追踪功能实现、梳理模块关系时必须使用本技能。触发关键词：分析整个项目/代码库、架构梳理、模块划分、代码模式识别、功能追踪、全局扫描。本技能通过 Gemini CLI 快速扫描完整代码库，提供 AI 驱动的架构洞察和代码分析，大幅节省手动探索时间。仅返回原始分析结果，不做二次解读。 | skillsmp.com | null | https://github.com/727474430/cli-rule-swtich/tree/main/templates/claude/jige/skills/use-gemini-for-code-analysis | 727474430 |
markdown-fetch | Fetches web content using Cloudflare Browser rendering and converts it to markdown | skillsmp.com | null | https://github.com/craigsdennis/skill-tutorial-checker-anthropic/tree/main/.claude/skills/markdown-fetch | craigsdennis |
tutorial-checker | Reads a markdown based tutorial and attempts to follow instructions. It reports on what needs work. | skillsmp.com | null | https://github.com/craigsdennis/skill-tutorial-checker-anthropic/tree/main/.claude/skills/tutorial-checker | craigsdennis |
brainstorming | Use when creating or developing anything, before writing code or implementation plans - refines rough ideas into fully-formed designs through structured Socratic questioning, alternative exploration, and incremental validation | skillsmp.com | null | https://github.com/ArieGoldkin/devPrepAi/tree/main/.claude/skills/brainstorming | ArieGoldkin |
module-scaffolder | Scaffolds new feature modules in DevPrep AI following the 6-folder architecture with proper TypeScript interfaces, path aliases, and quality standards. Use when creating new domains like 'analytics', 'notifications', or any new feature module. | skillsmp.com | null | https://github.com/ArieGoldkin/devPrepAi/tree/main/.claude/skills/module-scaffolder | ArieGoldkin |
trpc-scaffolder | Scaffolds tRPC routers, procedures, and Zod schemas with full type safety following DevPrep AI patterns | skillsmp.com | null | https://github.com/ArieGoldkin/devPrepAi/tree/main/.claude/skills/trpc-scaffolder | ArieGoldkin |
wordpress-playground-blueprints | Guide for creating WordPress Playground Blueprint JSON files and executing WP-CLI commands. Use when building Blueprint files, automating WordPress/WooCommerce management via CLI, configuring WordPress Playground environments, or troubleshooting. Covers blueprint creation, WP-CLI commands, and WooCommerce CLI operation... | skillsmp.com | null | https://github.com/fellyph/cursor-rules/tree/main/claude/skills/blueprint-maker | fellyph |
wordpress-docs-review | Review and validate WordPress documentation against official style guide standards. Use when reviewing documentation for WordPress core, themes, plugins, or related projects. Checks compliance with voice/tone, accessibility, inclusivity, code formatting, and technical writing standards. | skillsmp.com | null | https://github.com/fellyph/cursor-rules/tree/main/claude/skills/wp-docs-reviewer | fellyph |
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