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<commit_before>111fabf6-2e4f-11e5-9284-b827eb9e62be<commit_msg>1124abce-2e4f-11e5-9284-b827eb9e62be<commit_after>1124abce-2e4f-11e5-9284-b827eb9e62be<|endoftext|> |
<commit_before>#include "pileup.h"
#include <htslib/sam.h>
#include "samio.h"
#include <iostream>
Pileup::Pileup(std::string samfile, std::string reffile): reader(samfile), ref(reffile), tid(), pos(), cov(), pileup(nullptr), iter(), alleles(), qual(), names(), readgroups(), counts({{'A',0},{'T',0},{'G',0},{'C',0}}) {... |
<commit_before>#include "plugin.h"
#include <prtypes.h>
#include <algorithm>
#include <cstring>
#include "emacsinstance.h"
#include "npapi-headers/npfunctions.h"
NPNetscapeFuncs g_browser_functions = { 0 };
namespace {
NPError initializeBrowserFuncs(NPNetscapeFuncs* bFuncs)
{
if (!bFuncs)
return NPERR... |
<commit_before>#include<iostream>
#include<cmath>
#include <kv/interval.hpp>
#include <kv/rdouble.hpp>
using namespace std;
int main(void)
{
// verification program for the Ramanujan theta function
// defined as f(a,b)=Sum[(a^(n*(n+1)/2))*b^(n*(n-1)/2),{n,-Infinity,Infinity}]
// this function is the gene... |
<commit_before>#include "fenwick_tree.h"
#include "string/kmp.h"
#include "string/algorithm.h"
#include "string/ustring.h"
#include "string/utility.h"
#include "optional.h"
#include "suffix_array/checker.h"
#include "suffix_array/lcp.h"
#include "suffix_array/rmq.h"
#include "suffix_array/invsa.h"
#include <stddef.h>
#... |
<commit_before>/*
* ngtcp2
*
* Copyright (c) 2017 ngtcp2 contributors
*
* Permission is hereby granted, free of charge, to any person obtaining
* a copy of this software and associated documentation files (the
* "Software"), to deal in the Software without restriction, including
* without limitation the rights ... |
<commit_before>/*
* Copyright (c) 2015-2017 Cryptonomex, Inc., and contributors.
*
* The MIT License
*
* Permission is hereby granted, free of charge, to any person obtaining a copy
* of this software and associated documentation files (the "Software"), to deal
* in the Software without restriction, including wi... |
<commit_before>// MFEM Example 6 - Parallel Version
//
// Compile with: make ex6p
//
// Sample runs: mpirun -np 4 ex6p -m ../data/square-disc.mesh -o 1
// mpirun -np 4 ex6p -m ../data/square-disc.mesh -o 2
// mpirun -np 4 ex6p -m ../data/square-disc-nurbs.mesh -o 2
// ... |
<commit_before>// Copyright (c) 2009 The Chromium Authors. All rights reserved.
// Use of this source code is governed by a BSD-style license that can be
// found in the LICENSE file.
#include "chrome/browser/app_modal_dialog.h"
#include <gtk/gtk.h>
#include "base/logging.h"
#include "base/string_util.h"
#include "c... |
<commit_before>// Copyright (c) 2010 The Chromium Authors. All rights reserved.
// Use of this source code is governed by a BSD-style license that can be
// found in the LICENSE file.
#include "chrome/browser/chromeos/login/utils.h"
#include "base/command_line.h"
#include "base/file_path.h"
#include "base/path_servic... |
<commit_before><commit_msg>Don't treat underscores as mnemonics in the bookmark bar.<commit_after><|endoftext|> |
<commit_before>// Copyright (c) 2009 The Chromium Authors. All rights reserved.
// Use of this source code is governed by a BSD-style license that can be
// found in the LICENSE file.
#include "chrome/browser/utility_process_host.h"
#include "app/app_switches.h"
#include "app/l10n_util.h"
#include "base/command_line.... |
<commit_before>#include <debugger/io/server.h>
#include <debugger/io/client.h>
#include <debugger/bridge/delayload.h>
#include <debugger/lua.h>
#include <debugger/debugger.h>
#include <bee/utility/unicode_win.h>
#include <bee/net/endpoint.h>
#include <memory>
#include <string_view>
#if defined(DEBUGGER_BRIDGE)
#incl... |
<commit_before>/*
Copyright (c) 2017 InversePalindrome
Memento Mori - Component.cpp
InversePalindrome.com
*/
#include "Component.hpp"
Component::Component(ID componentID) :
componentID(componentID)
{
}
Component::ID Component::getID() const
{
return this->componentID;
}
std::istringstream& o... |
<commit_before>// Copyright (c) 2010 The Chromium Authors. All rights reserved.
// Use of this source code is governed by a BSD-style license that can be
// found in the LICENSE file.
#include "chrome/test/in_process_browser_test.h"
#include "base/command_line.h"
#include "base/file_path.h"
#include "base/file_util.h... |
<commit_before>////////////////////////////////////////////////////////////
//
// SFML - Simple and Fast Multimedia Library
// Copyright (C) 2007-2014 Laurent Gomila (laurent.gom@gmail.com)
//
// This software is provided 'as-is', without any express or implied warranty.
// In no event will the authors be held liable f... |
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