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実際のウェイトの部分だけ取り出すと
w_opt_HHL = x_HHL[2:6] w_opt_exact = x_exact[2:6] w_opt = pd.DataFrame(np.vstack([w_opt_exact, w_opt_HHL]).T, index=df.columns, columns=['exact', 'HHL']) w_opt w_opt.plot.bar()
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BSD-3-Clause
notebooks/7.3_application_of_HHL_algorithm.ipynb
Hiroya-W/quantum-native-dojo
※重みが負になっている銘柄は、「空売り」(株を借りてきて売ること。株価が下がる局面で利益が得られる手法)を表す。今回は目標リターンが10%と、GAFA株(単独で30〜40%の期待リターン)にしてはかなり小さい値を設定したため、空売りを行って全体の期待リターンを下げていると思われる。 Appendix: バックテスト過去のデータから得られた投資ルールを、それ以降のデータを用いて検証することを「バックテスト」と呼び、その投資ルールの有効性を測るために重要である。ここでは以上のように2017年のデータから構築したポートフォリオに投資した場合に、翌年の2018年にどの程度資産価値が変化するかを観察する。
# 2018年の1年間のデータを使用 start = datetime.datetime(2017, 12, 30) end = datetime.datetime(2018, 12, 31) # Yahoo! Financeから日次の株価データを取得 data = web.DataReader(codes, 'yahoo', start, end) df2018 = data['Adj Close'] display(df2018.tail()) ## 株価をプロットしてみる fig, axes = plt.subplots(nrows=1, ncols=2, figsize=(15, 6)) df2018.loc[:,[...
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BSD-3-Clause
notebooks/7.3_application_of_HHL_algorithm.ipynb
Hiroya-W/quantum-native-dojo
2018年はAmazon以外のGAFA各社の株式が軟調だったので、およそ-20%もの損が出ているが、exact解の方は多少マシであるようだ。。ちなみに、元々行ったのはリスク最小化なので、この一年間のリスクも計算してみると、exact解の方が小さい結果となった。
pf_value.pct_change().std() * np.sqrt(252) ## 年率換算
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BSD-3-Clause
notebooks/7.3_application_of_HHL_algorithm.ipynb
Hiroya-W/quantum-native-dojo
**Interactive mapping and analysis of geospatial big data using geemap and Google Earth Engine**This notebook was developed for the geemap workshop at the [GeoPython 2021 Conference](https://2021.geopython.net).Authors: [Qiusheng Wu](https://github.com/giswqs), [Kel Markert](https://github.com/KMarkert)Link to this not...
import os import ee import geemap
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Create an interactive map
Map = geemap.Map() Map
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Customize the default mapYou can specify the center(lat, lon) and zoom for the default map. The lite mode will only show the zoom in/out tool.
Map = geemap.Map(center=(40, -100), zoom=4, lite_mode=True) Map
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Add basemaps
Map = geemap.Map() Map.add_basemap('HYBRID') Map from geemap.basemaps import basemaps Map.add_basemap(basemaps.OpenTopoMap)
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Change basemaps without coding ![](https://i.imgur.com/PXURCSP.png)
Map = geemap.Map() Map
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Add WMS and XYZ tile layersExamples: https://viewer.nationalmap.gov/services/
Map = geemap.Map() url = 'https://mt1.google.com/vt/lyrs=p&x={x}&y={y}&z={z}' Map.add_tile_layer(url, name='Google Terrain', attribution='Google') Map naip_url = 'https://services.nationalmap.gov/arcgis/services/USGSNAIPImagery/ImageServer/WMSServer?' Map.add_wms_layer( url=naip_url, layers='0', name='NAIP Imagery...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Use drawing tools
Map = geemap.Map() Map # Map.user_roi.getInfo() # Map.user_rois.getInfo()
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Convert GEE JavaScript to Pythonhttps://developers.google.com/earth-engine/guides/image_visualization
js_snippet = """ // Load an image. var image = ee.Image('LANDSAT/LC08/C01/T1_TOA/LC08_044034_20140318'); // Define the visualization parameters. var vizParams = { bands: ['B5', 'B4', 'B3'], min: 0, max: 0.5, gamma: [0.95, 1.1, 1] }; // Center the map and display the image. Map.setCenter(-122.1899, 37.5010, 10...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
You can also convert GEE JavaScript to Python without coding.![](https://i.imgur.com/VnnrJwe.png)
Map = geemap.Map() Map
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Earth Engine datasets Load Earth Engine datasets
Map = geemap.Map() # Add Earth Engine datasets dem = ee.Image('USGS/SRTMGL1_003') landcover = ee.Image("ESA/GLOBCOVER_L4_200901_200912_V2_3").select('landcover') landsat7 = ee.Image('LANDSAT/LE7_TOA_5YEAR/1999_2003') states = ee.FeatureCollection("TIGER/2018/States") # Set visualization parameters. vis_params = { ...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Search the Earth Engine Data Catalog
Map = geemap.Map() Map dem = ee.Image('CGIAR/SRTM90_V4') Map.addLayer(dem, {}, "CGIAR/SRTM90_V4") vis_params = { 'min': 0, 'max': 4000, 'palette': ['006633', 'E5FFCC', '662A00', 'D8D8D8', 'F5F5F5'], } Map.addLayer(dem, vis_params, "DEM")
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Use the datasets module
from geemap.datasets import DATA Map = geemap.Map() dem = ee.Image(DATA.USGS_SRTMGL1_003) vis_params = { 'min': 0, 'max': 4000, 'palette': ['006633', 'E5FFCC', '662A00', 'D8D8D8', 'F5F5F5'], } Map.addLayer(dem, vis_params, 'SRTM DEM') Map
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Use the Inspector tool ![](https://i.imgur.com/drnfJ6N.png)
Map = geemap.Map() # Add Earth Engine datasets dem = ee.Image('USGS/SRTMGL1_003') landcover = ee.Image("ESA/GLOBCOVER_L4_200901_200912_V2_3").select('landcover') landsat7 = ee.Image('LANDSAT/LE7_TOA_5YEAR/1999_2003').select( ['B1', 'B2', 'B3', 'B4', 'B5', 'B7'] ) states = ee.FeatureCollection("TIGER/2018/States") ...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Data visualization Use the Plotting tool ![](https://i.imgur.com/t4jKsNo.png)
Map = geemap.Map() landsat7 = ee.Image('LANDSAT/LE7_TOA_5YEAR/1999_2003').select( ['B1', 'B2', 'B3', 'B4', 'B5', 'B7'] ) landsat_vis = {'bands': ['B4', 'B3', 'B2'], 'gamma': 1.4} Map.addLayer(landsat7, landsat_vis, "Landsat") hyperion = ee.ImageCollection('EO1/HYPERION').filter( ee.Filter.date('2016-01-01', ...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Change layer opacity
Map = geemap.Map(center=(40, -100), zoom=4) dem = ee.Image('USGS/SRTMGL1_003') states = ee.FeatureCollection("TIGER/2018/States") vis_params = { 'min': 0, 'max': 4000, 'palette': ['006633', 'E5FFCC', '662A00', 'D8D8D8', 'F5F5F5'], } Map.addLayer(dem, vis_params, 'SRTM DEM', True, 1) Map.addLayer(states, ...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Visualize raster data
Map = geemap.Map(center=(40, -100), zoom=4) # Add Earth Engine dataset dem = ee.Image('USGS/SRTMGL1_003') landsat7 = ee.Image('LANDSAT/LE7_TOA_5YEAR/1999_2003').select( ['B1', 'B2', 'B3', 'B4', 'B5', 'B7'] ) vis_params = { 'min': 0, 'max': 4000, 'palette': ['006633', 'E5FFCC', '662A00', 'D8D8D8', 'F5F...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Visualize vector data
Map = geemap.Map() states = ee.FeatureCollection("TIGER/2018/States") Map.addLayer(states, {}, "US States") Map vis_params = { 'color': '000000', 'colorOpacity': 1, 'pointSize': 3, 'pointShape': 'circle', 'width': 2, 'lineType': 'solid', 'fillColorOpacity': 0.66, } palette = ['006633', 'E5...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Add a legend
legends = geemap.builtin_legends for legend in legends: print(legend) Map = geemap.Map() Map.add_basemap('HYBRID') landcover = ee.Image('USGS/NLCD/NLCD2016').select('landcover') Map.addLayer(landcover, {}, 'NLCD Land Cover') Map.add_legend(builtin_legend='NLCD') Map Map = geemap.Map() legend_dict = { '11 Open ...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Add a colorbar
Map = geemap.Map() dem = ee.Image('USGS/SRTMGL1_003') vis_params = { 'min': 0, 'max': 4000, 'palette': ['006633', 'E5FFCC', '662A00', 'D8D8D8', 'F5F5F5'], } Map.addLayer(dem, vis_params, 'SRTM DEM') colors = vis_params['palette'] vmin = vis_params['min'] vmax = vis_params['max'] Map.add_colorbar(vis_par...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Create a split-panel map
Map = geemap.Map() Map.split_map(left_layer='HYBRID', right_layer='TERRAIN') Map Map = geemap.Map() Map.split_map( left_layer='NLCD 2016 CONUS Land Cover', right_layer='NLCD 2001 CONUS Land Cover' ) Map nlcd_2001 = ee.Image('USGS/NLCD/NLCD2001').select('landcover') nlcd_2016 = ee.Image('USGS/NLCD/NLCD2016').select(...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Create linked maps
image = ( ee.ImageCollection('COPERNICUS/S2') .filterDate('2018-09-01', '2018-09-30') .map(lambda img: img.divide(10000)) .median() ) vis_params = [ {'bands': ['B4', 'B3', 'B2'], 'min': 0, 'max': 0.3, 'gamma': 1.3}, {'bands': ['B8', 'B11', 'B4'], 'min': 0, 'max': 0.3, 'gamma': 1.3}, {'bands...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Create timelapse animations
geemap.show_youtube('https://youtu.be/mA21Us_3m28')
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Create time-series composites
geemap.show_youtube('https://youtu.be/kEltQkNia6o')
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Data analysis Descriptive statistics
Map = geemap.Map() centroid = ee.Geometry.Point([-122.4439, 37.7538]) image = ee.ImageCollection('LANDSAT/LC08/C01/T1_SR').filterBounds(centroid).first() vis = {'min': 0, 'max': 3000, 'bands': ['B5', 'B4', 'B3']} Map.centerObject(centroid, 8) Map.addLayer(image, vis, "Landsat-8") Map image.propertyNames().getInfo()...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Zonal statistics
Map = geemap.Map() # Add Earth Engine dataset dem = ee.Image('USGS/SRTMGL1_003') # Set visualization parameters. dem_vis = { 'min': 0, 'max': 4000, 'palette': ['006633', 'E5FFCC', '662A00', 'D8D8D8', 'F5F5F5'], } # Add Earth Engine DEM to map Map.addLayer(dem, dem_vis, 'SRTM DEM') # Add Landsat data to ...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Zonal statistics by group
Map = geemap.Map() dataset = ee.Image('USGS/NLCD/NLCD2016') landcover = ee.Image(dataset.select('landcover')) Map.addLayer(landcover, {}, 'NLCD 2016') states = ee.FeatureCollection("TIGER/2018/States") Map.addLayer(states, {}, 'US States') Map.add_legend(builtin_legend='NLCD') Map out_dir = os.path.expanduser('~/Down...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Unsupervised classificationSource: https://developers.google.com/earth-engine/guides/clusteringThe `ee.Clusterer` package handles unsupervised classification (or clustering) in Earth Engine. These algorithms are currently based on the algorithms with the same name in [Weka](http://www.cs.waikato.ac.nz/ml/weka/). More ...
Map = geemap.Map() point = ee.Geometry.Point([-87.7719, 41.8799]) image = ( ee.ImageCollection('LANDSAT/LC08/C01/T1_SR') .filterBounds(point) .filterDate('2019-01-01', '2019-12-31') .sort('CLOUD_COVER') .first() .select('B[1-7]') ) vis_params = {'min': 0, 'max': 3000, 'bands': ['B5', 'B4', 'B...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Make training dataset**There are several ways you can create a region for generating the training dataset.- Draw a shape (e.g., rectangle) on the map and the use `region = Map.user_roi`- Define a geometry, such as `region = ee.Geometry.Rectangle([-122.6003, 37.4831, -121.8036, 37.8288])`- Create a buffer zone around ...
training = image.sample( **{ # 'region': region, 'scale': 30, 'numPixels': 5000, 'seed': 0, 'geometries': True, # Set this to False to ignore geometries } ) Map.addLayer(training, {}, 'training', False)
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Train the clusterer**
# Instantiate the clusterer and train it. n_clusters = 5 clusterer = ee.Clusterer.wekaKMeans(n_clusters).train(training)
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Classify the image**
# Cluster the input using the trained clusterer. result = image.cluster(clusterer) # # Display the clusters with random colors. Map.addLayer(result.randomVisualizer(), {}, 'clusters') Map
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Label the clusters**
legend_keys = ['One', 'Two', 'Three', 'Four', 'ect'] legend_colors = ['#8DD3C7', '#FFFFB3', '#BEBADA', '#FB8072', '#80B1D3'] # Reclassify the map result = result.remap([0, 1, 2, 3, 4], [1, 2, 3, 4, 5]) Map.addLayer( result, {'min': 1, 'max': 5, 'palette': legend_colors}, 'Labelled clusters' ) Map.add_legend( ...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Visualize the result**
print('Change layer opacity:') cluster_layer = Map.layers[-1] cluster_layer.interact(opacity=(0, 1, 0.1)) Map
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Export the result**
out_dir = os.path.expanduser('~/Downloads') out_file = os.path.join(out_dir, 'cluster.tif') geemap.ee_export_image(result, filename=out_file, scale=90) # geemap.ee_export_image_to_drive(result, description='clusters', folder='export', scale=90)
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Supervised classification Source: https://developers.google.com/earth-engine/guides/classificationThe `Classifier` package handles supervised classification by traditional ML algorithms running in Earth Engine. These classifiers include CART, RandomForest, NaiveBayes and SVM. The general workflow for classification is...
Map = geemap.Map() point = ee.Geometry.Point([-122.4439, 37.7538]) image = ( ee.ImageCollection('LANDSAT/LC08/C01/T1_SR') .filterBounds(point) .filterDate('2016-01-01', '2016-12-31') .sort('CLOUD_COVER') .first() .select('B[1-7]') ) vis_params = {'min': 0, 'max': 3000, 'bands': ['B5', 'B4', '...
_____no_output_____
MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Make training dataset**There are several ways you can create a region for generating the training dataset.- Draw a shape (e.g., rectangle) on the map and the use `region = Map.user_roi`- Define a geometry, such as `region = ee.Geometry.Rectangle([-122.6003, 37.4831, -121.8036, 37.8288])`- Create a buffer zone around ...
# region = Map.user_roi # region = ee.Geometry.Rectangle([-122.6003, 37.4831, -121.8036, 37.8288]) # region = ee.Geometry.Point([-122.4439, 37.7538]).buffer(10000)
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
In this example, we are going to use the [USGS National Land Cover Database (NLCD)](https://developers.google.com/earth-engine/datasets/catalog/USGS_NLCD) to create label dataset for training![](https://i.imgur.com/7QoRXxu.png)
nlcd = ee.Image('USGS/NLCD/NLCD2016').select('landcover').clip(image.geometry()) Map.addLayer(nlcd, {}, 'NLCD') Map # Make the training dataset. points = nlcd.sample( **{ 'region': image.geometry(), 'scale': 30, 'numPixels': 5000, 'seed': 0, 'geometries': True, # Set this to...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Train the classifier**
# Use these bands for prediction. bands = ['B1', 'B2', 'B3', 'B4', 'B5', 'B6', 'B7'] # This property of the table stores the land cover labels. label = 'landcover' # Overlay the points on the imagery to get training. training = image.select(bands).sampleRegions( **{'collection': points, 'properties': [label], 's...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Classify the image**
# Classify the image with the same bands used for training. result = image.select(bands).classify(trained) # # Display the clusters with random colors. Map.addLayer(result.randomVisualizer(), {}, 'classfied') Map
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Render categorical map**To render a categorical map, we can set two image properties: `landcover_class_values` and `landcover_class_palette`. We can use the same style as the NLCD so that it is easy to compare the two maps.
class_values = nlcd.get('landcover_class_values').getInfo() class_palette = nlcd.get('landcover_class_palette').getInfo() landcover = result.set('classification_class_values', class_values) landcover = landcover.set('classification_class_palette', class_palette) Map.addLayer(landcover, {}, 'Land cover') Map.add_legend(...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Visualize the result**
print('Change layer opacity:') cluster_layer = Map.layers[-1] cluster_layer.interact(opacity=(0, 1, 0.1))
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Export the result**
out_dir = os.path.expanduser('~/Downloads') out_file = os.path.join(out_dir, 'landcover.tif') geemap.ee_export_image(landcover, filename=out_file, scale=900) # geemap.ee_export_image_to_drive(landcover, description='landcover', folder='export', scale=900)
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Training sample creation![](https://i.imgur.com/QQDjcPt.png)
geemap.show_youtube('https://youtu.be/VWh5PxXPZw0') Map = geemap.Map() Map
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
WhiteboxTools
import whiteboxgui whiteboxgui.show() whiteboxgui.show(tree=True)
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
![](https://i.imgur.com/aNRfUIf.png)
Map = geemap.Map() Map
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Map making Plot a single band image
import matplotlib.pyplot as plt from geemap import cartoee geemap.ee_initialize() srtm = ee.Image("CGIAR/SRTM90_V4") region = [-180, -60, 180, 85] # define bounding box to request data vis = {'min': 0, 'max': 3000} # define visualization parameters for image fig = plt.figure(figsize=(15, 10)) cmap = "gist_earth" # ...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Plot an RGB image
# get a landsat image to visualize image = ee.Image('LANDSAT/LC08/C01/T1_SR/LC08_044034_20140318') # define the visualization parameters to view vis = {"bands": ['B5', 'B4', 'B3'], "min": 0, "max": 5000, "gamma": 1.3} fig = plt.figure(figsize=(15, 10)) # here is the bounding box of the map extent we want to use # for...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Add map elements
from matplotlib.lines import Line2D # get a landsat image to visualize image = ee.Image('LANDSAT/LC08/C01/T1_SR/LC08_044034_20140318') # define the visualization parameters to view vis = {"bands": ['B5', 'B4', 'B3'], "min": 0, "max": 5000, "gamma": 1.3} fig = plt.figure(figsize=(15, 10)) # here is the bounding box of...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Plot multiple layers
Map = geemap.Map() image = ( ee.ImageCollection('MODIS/MCD43A4_006_NDVI') .filter(ee.Filter.date('2018-04-01', '2018-05-01')) .select("NDVI") .first() ) vis_params = { 'min': 0.0, 'max': 1.0, 'palette': [ 'FFFFFF', 'CE7E45', 'DF923D', 'F1B555', 'FCD1...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Use custom projections
import cartopy.crs as ccrs # get an earth engine image of ocean data for Jan-Mar 2018 ocean = ( ee.ImageCollection('NASA/OCEANDATA/MODIS-Terra/L3SMI') .filter(ee.Filter.date('2018-01-01', '2018-03-01')) .median() .select(["sst"], ["SST"]) ) # set parameters for plotting # will plot the Sea Surface Temp ...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Create timelapse animations
Map = geemap.Map() lon = -115.1585 lat = 36.1500 start_year = 1984 end_year = 2000 point = ee.Geometry.Point(lon, lat) years = ee.List.sequence(start_year, end_year) def get_best_image(year): start_date = ee.Date.fromYMD(year, 1, 1) end_date = ee.Date.fromYMD(year, 12, 31) image = ( ee.ImageCol...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Data export Export ee.Image
Map = geemap.Map() image = ee.Image('LANDSAT/LE7_TOA_5YEAR/1999_2003') landsat_vis = {'bands': ['B4', 'B3', 'B2'], 'gamma': 1.4} Map.addLayer(image, landsat_vis, "LE7_TOA_5YEAR/1999_2003", True, 1) Map # Draw any shapes on the map using the Drawing tools before executing this code block roi = Map.user_roi if roi is...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Exporting all bands as one single image
image = image.clip(roi).unmask() geemap.ee_export_image( image, filename=filename, scale=90, region=roi, file_per_band=False )
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Exporting each band as one image
geemap.ee_export_image( image, filename=filename, scale=90, region=roi, file_per_band=True )
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Export an image to Google Drive¶
# geemap.ee_export_image_to_drive(image, description='landsat', folder='export', region=roi, scale=30)
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Export ee.ImageCollection
loc = ee.Geometry.Point(-99.2222, 46.7816) collection = ( ee.ImageCollection('USDA/NAIP/DOQQ') .filterBounds(loc) .filterDate('2008-01-01', '2020-01-01') .filter(ee.Filter.listContains("system:band_names", "N")) ) collection.aggregate_array('system:index').getInfo() geemap.ee_export_image_collection(col...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Extract pixels as a numpy array
import matplotlib.pyplot as plt img = ee.Image('LANDSAT/LC08/C01/T1_SR/LC08_038029_20180810').select(['B4', 'B5', 'B6']) aoi = ee.Geometry.Polygon( [[[-110.8, 44.7], [-110.8, 44.6], [-110.6, 44.6], [-110.6, 44.7]]], None, False ) rgb_img = geemap.ee_to_numpy(img, region=aoi) print(rgb_img.shape) rgb_img_test = (...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Export pixel values to points
Map = geemap.Map() # Add Earth Engine dataset dem = ee.Image('USGS/SRTMGL1_003') landsat7 = ee.Image('LANDSAT/LE7_TOA_5YEAR/1999_2003') # Set visualization parameters. vis_params = { 'min': 0, 'max': 4000, 'palette': ['006633', 'E5FFCC', '662A00', 'D8D8D8', 'F5F5F5'], } # Add Earth Eninge layers to Map M...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Download sample data**
work_dir = os.path.expanduser('~/Downloads') in_shp = os.path.join(work_dir, 'us_cities.shp') if not os.path.exists(in_shp): data_url = 'https://github.com/giswqs/data/raw/main/us/us_cities.zip' geemap.download_from_url(data_url, out_dir=work_dir) in_fc = geemap.shp_to_ee(in_shp) Map.addLayer(in_fc, {}, 'Cities...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Export pixel values as a shapefile**
out_shp = os.path.join(work_dir, 'dem.shp') geemap.extract_values_to_points(in_fc, dem, out_shp)
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
**Export pixel values as a csv**
out_csv = os.path.join(work_dir, 'landsat.csv') geemap.extract_values_to_points(in_fc, landsat7, out_csv)
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Export ee.FeatureCollection
Map = geemap.Map() fc = ee.FeatureCollection('users/giswqs/public/countries') Map.addLayer(fc, {}, "Countries") Map out_dir = os.path.expanduser('~/Downloads') out_shp = os.path.join(out_dir, 'countries.shp') geemap.ee_to_shp(fc, filename=out_shp) out_csv = os.path.join(out_dir, 'countries.csv') geemap.ee_export_vecto...
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Web apps Deploy web apps using ngrok **Steps to deploy an Earth Engine App:**1. Install ngrok by following the [instruction](https://ngrok.com/download)3. Download the notebook [71_timelapse.ipynb](https://geemap.org/notebooks/71_timelapse/71_timelapse.ipynb) 4. Run this from the command line: `voila --no-browser 71_...
geemap.show_youtube("https://youtu.be/eRDZBVJcNCk")
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Deploy web apps using Heroku **Steps to deploy an Earth Engine App:**- [Sign up](https://signup.heroku.com/) for a free heroku account.- Follow the [instructions](https://devcenter.heroku.com/articles/getting-started-with-pythonset-up) to install [Git](https://git-scm.com/book/en/v2/Getting-Started-Installing-Git) and...
geemap.show_youtube("https://youtu.be/nsIjfD83ggA")
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MIT
docs/workshops/GeoPython_2021.ipynb
Jack-ee/geemap
Lambda School Data Science, Unit 2: Predictive Modeling Regression & Classification, Module 3 AssignmentWe're going back to our other **New York City** real estate dataset. Instead of predicting apartment rents, you'll predict property sales prices.But not just for condos in Tribeca...Instead, predict property sales p...
# If you're in Colab... import os, sys in_colab = 'google.colab' in sys.modules if in_colab: # Install required python packages: # category_encoders, version >= 2.0 # pandas-profiling, version >= 2.0 # plotly, version >= 4.0 !pip install --upgrade category_encoders pandas-profiling plotly ...
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MIT
module3/assignment_regression_classification_3.ipynb
AdrianduPlessis/DS-Unit-2-Regression-Classification
CNN Architectures 1D CNN are often use for sensor data, or for time series data. ![image.png](data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAArwAAADSCAYAAACo2xNAAAAgAElEQVR4AexdB3gV1db1PX1P/6egiCAdFEGqIr0XAekQSCAQeu+9i9KLSEda6FVAVDoIEpAagoIkoEiRolIEaaGIdf3f2uFcJjcJhNyZa27Y8307M3cyc+bMOmdm1t5nn70fgy6KgCKgCCgCioAioAgoAop...
# Basic CNN model = Sequential() model.add(Conv1D(64, 2, activation="relu", input_shape=(32,1))) model.add(Flatten()) model.add(Dense(5, activation = 'softmax')) model.compile(loss = 'sparse_categorical_crossentropy', optimizer = "adam", metrics = ['accuracy']) model.summary...
Epoch 1/30 12468/12468 - 44s - loss: 0.2602 - accuracy: 0.9065 - val_loss: 0.4388 - val_accuracy: 0.8419 Epoch 2/30 12468/12468 - 44s - loss: 0.2596 - accuracy: 0.9064 - val_loss: 0.3199 - val_accuracy: 0.8983 Epoch 3/30 12468/12468 - 45s - loss: 0.2592 - accuracy: 0.9069 - val_loss: 0.4657 - val_accuracy: 0.8281 Epoch...
MIT
4_CNN_Models.ipynb
seanlaidlaw/land-use-tensorflow-project
Intermediate Convolutional Neural Network
model = Sequential() model.add(Conv1D(28, 2, activation="relu", input_shape=(32,1))) model.add(Conv1D(28, 2, activation="relu")) model.add(MaxPooling1D(2)) model.add(Conv1D(64, 2, activation="relu")) model.add(Conv1D(64, 2,activation="relu")) model.add(MaxPooling1D(2)) model.add(BatchNormalization()) model.add(Flatt...
3336/3336 [==============================] - 7s 2ms/step - loss: 0.3265 - accuracy: 0.8874 Loss: 0.32654300332069397 Accuracy: 0.8874179124832153
MIT
4_CNN_Models.ipynb
seanlaidlaw/land-use-tensorflow-project
Principles of CNN Design:- by convention channel size stays the same throughout network- number of filters should start low and increase throughout the network- keep adding layers until we over-fit then regularize using l1/l2 regularisation, droput, batch norm- be inspired by patterns in classic networks such as Conv-P...
callbacks_list = [ keras.callbacks.ModelCheckpoint( filepath='best_model.{epoch:02d}-{val_loss:.2f}.h5', monitor='val_loss', save_best_only=True), keras.callbacks.EarlyStopping(monitor='accuracy', patience=1)] model.fit(x_train, y_train, batch_size=32,epochs=50, verbose=2, callbacks=callbacks_li...
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MIT
4_CNN_Models.ipynb
seanlaidlaw/land-use-tensorflow-project
Auto-Optimised Models Here, before attempting to use more appropriate CNN and RNNs, we are going to attempt one last time to get the best performance using only dense/fully-connected layers, by using the keras-tuner package to tune the hyperparameters of our model. Usually in machine learning we manually change each o...
!pip install keras-tuner from kerastuner import RandomSearch def build_model(hp): d1 = hp.Int("d1_units", min_value=6, max_value=256, step=16) model = keras.models.Sequential() model.add(tf.keras.layers.Dense(d1, activation='relu', input_dim=32)) for i in range(hp.Int('n_layers', 1, 8)): # adding variation o...
Trial 5 Complete [00h 50m 10s] val_accuracy: 0.917763352394104 Best val_accuracy So Far: 0.9192193508148193 Total elapsed time: 04h 20m 50s INFO:tensorflow:Oracle triggered exit
MIT
4_CNN_Models.ipynb
seanlaidlaw/land-use-tensorflow-project
Construire le Modele
model = Sequential() model.add(Conv1D(64, 2, activation="relu", input_shape=(4,1))) model.add(Conv1D(64, 2, activation="relu")) model.add(Dense(16, activation="relu")) model.add(MaxPooling1D()) model.add(Flatten()) model.add(Dense(3, activation = 'softmax')) model.compile(loss = 'sparse_categorical_crossentropy', ...
Epoch 1/100 7/7 - 0s - loss: 1.0363 - accuracy: 0.3465 - val_loss: 0.9948 - val_accuracy: 0.2692 Epoch 2/100 7/7 - 0s - loss: 0.9452 - accuracy: 0.3465 - val_loss: 0.9041 - val_accuracy: 0.5769 Epoch 3/100 7/7 - 0s - loss: 0.8996 - accuracy: 0.6238 - val_loss: 0.8725 - val_accuracy: 0.3846 Epoch 4/100 7/7 - 0s - loss: ...
MIT
4_CNN_Models.ipynb
seanlaidlaw/land-use-tensorflow-project
Create redo recordsThis Jupyter notebook shows how to create a Senzing "redo record".It assumes a G2 database that is empty.Essentially the steps are to create very similar records under different data sources,then delete one of the records. This produces a "redo record". G2Engine Senzing initializationCreate an in...
from G2Engine import G2Engine from G2ConfigMgr import G2ConfigMgr from G2Config import G2Config g2_engine = G2Engine() try: g2_engine_flags = G2Engine.G2_EXPORT_DEFAULT_FLAGS g2_engine.initV2( "pyG2EngineForRedoRecords", senzing_config_json, verbose_logging) except G2Exception.G2ModuleGe...
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Apache-2.0
notebooks/senzing-examples/Windows/senzing-create-redo-records.ipynb
Senzing/docker-jupyter
primeEngine
try: g2_engine.primeEngine() except G2Exception.G2ModuleGenericException as err: print(g2_engine.getLastException())
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Apache-2.0
notebooks/senzing-examples/Windows/senzing-create-redo-records.ipynb
Senzing/docker-jupyter
Variable initialization
load_id = None
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Apache-2.0
notebooks/senzing-examples/Windows/senzing-create-redo-records.ipynb
Senzing/docker-jupyter
Create add data source functionCreate a data source with a name having the form `TEST_DATA_SOURCE_nnn`.
def add_data_source(datasource_suffix): datasource_prefix = "TEST_DATA_SOURCE_" datasource_id = "{0}{1}".format(datasource_prefix, datasource_suffix) configuration_comment = "Added {}".format(datasource_id) g2_config.addDataSource(config_handle, datasource_id) configuration_bytearray = bytearray() ...
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Apache-2.0
notebooks/senzing-examples/Windows/senzing-create-redo-records.ipynb
Senzing/docker-jupyter
Create add record functionCreate a record with the id having the form `RECORD_nnn`.**Note:** this is essentially the same record with only the `DRIVERS_LICENSE_NUMBER` modified slightly.
def add_record(record_id_suffix, datasource_suffix): datasource_prefix = "TEST_DATA_SOURCE_" record_id_prefix = "RECORD_" datasource_id = "{0}{1}".format(datasource_prefix, datasource_suffix) record_id = "{0}{1}".format(record_id_prefix, record_id_suffix) data = { "NAMES": [{ "NA...
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Apache-2.0
notebooks/senzing-examples/Windows/senzing-create-redo-records.ipynb
Senzing/docker-jupyter
Redo record Print data sourcesPrint the list of currently defined data sources.
try: datasources_bytearray = bytearray() g2_config.listDataSources(config_handle, datasources_bytearray) datasources_dictionary = json.loads(datasources_bytearray.decode()) print(datasources_dictionary) except G2Exception.G2ModuleGenericException as err: print(g2_config.getLastException())
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Apache-2.0
notebooks/senzing-examples/Windows/senzing-create-redo-records.ipynb
Senzing/docker-jupyter
Add data sources and records
try: add_data_source(1) add_record(1,1) add_record(2,1) add_data_source(2) add_record(3,2) add_record(4,2) add_data_source(3) add_record(5,3) add_record(6,3) except G2Exception.G2ModuleGenericException as err: print(g2_engine.getLastException())
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Apache-2.0
notebooks/senzing-examples/Windows/senzing-create-redo-records.ipynb
Senzing/docker-jupyter
Delete recordDeleting a record will create a "redo record".
try: g2_engine.deleteRecord("TEST_DATA_SOURCE_3", "RECORD_5", load_id) except G2Exception.G2ModuleGenericException as err: print(g2_engine.getLastException())
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Apache-2.0
notebooks/senzing-examples/Windows/senzing-create-redo-records.ipynb
Senzing/docker-jupyter
Count redo recordsThe `count_of_redo_records` will show how many redo records are in Senzing's queue of redo records.
try: count_of_redo_records = g2_engine.countRedoRecords() print("Number of redo records: {0}".format(count_of_redo_records)) except G2Exception.G2ModuleGenericException as err: print(g2_engine.getLastException())
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Apache-2.0
notebooks/senzing-examples/Windows/senzing-create-redo-records.ipynb
Senzing/docker-jupyter
Print data sources againPrint the list of currently defined data sources.
try: datasources_bytearray = bytearray() g2_config.listDataSources(config_handle, datasources_bytearray) datasources_dictionary = json.loads(datasources_bytearray.decode()) print(datasources_dictionary) except G2Exception.G2ModuleGenericException as err: print(g2_config.getLastException())
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Apache-2.0
notebooks/senzing-examples/Windows/senzing-create-redo-records.ipynb
Senzing/docker-jupyter
pipeline 2
random_seed = 1002 data_in_shape = (16, 16, 2) layers = [ Conv2D(5, (3,3), activation='relu', padding='same', strides=(2,2), data_format='channels_last', use_bias=True), Conv2D(4, (3,3), activation='linear', padding='valid', strides=(1,1), data_format='channels_last', use_bias=True), Conv2D(2, (1,1), activ...
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MIT
notebooks/pipeline/pipeline_02.ipynb
HimariO/keras-js
export for Keras.js tests
import os filename = '../../test/data/pipeline/02.json' if not os.path.exists(os.path.dirname(filename)): os.makedirs(os.path.dirname(filename)) with open(filename, 'w') as f: json.dump(DATA, f) print(json.dumps(DATA))
{"pipeline_02": {"input": {"data": [-0.742023, -0.077688, -0.167692, 0.205448, -0.633864, -0.164175, -0.731823, 0.313236, 0.613465, -0.723716, -0.299231, 0.229032, 0.102561, 0.384949, -0.90948, -0.294898, -0.916217, -0.699031, -0.323329, -0.673445, 0.521949, -0.306796, -0.476018, -0.628623, 0.808028, -0.585043, -0.3074...
MIT
notebooks/pipeline/pipeline_02.ipynb
HimariO/keras-js
Load packages and data
import numpy as np import pandas as pd import seaborn as sns; sns.set(style="ticks", color_codes=True) import matplotlib.pyplot as plt data = pd.read_csv('breast-cancer-wisconsin.txt', sep=",", header=0, index_col = 0) data.dtypes # some of the columns have bad data, since all columns contain numeric data
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Data cleaning
# check the categories present in the data for column in list(data.columns[1:]): print(column, data[column].unique()) # nas are represented in different ways as nan, '#', '?', and 'No idea' # and some entreis have class value as 20 or 40, while expected 2 or 4
Clump Thickness [ 7 6 8 5 10 3 4 1 70 80 100 2 9 50 30 40 60] Uniformity of Cell Size ['8' '10' '6' '5' '4' '9' '3' '1' 'No idea' '2' '7' '50' '100' '30' nan '#' '?' '80' '40' '60' '90' '20'] Uniformity of Cell Shape ['3' '5' '4' '6' '10' '7' '1' 'No idea' '2' '60' '100' '40' nan '#' '9' '8' '...
MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Coerce all data to be numericThis will make the wrong entires NAs
data_n = data.apply(pd.to_numeric, errors='coerce')
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Handel rows with values that are 10 times as large
dat_10 = data_n[data_n.Class > 4] dat_d10 = dat_10.iloc[:,1:]/10 dat_d10.insert(0, 'ID', dat_10['ID']) # all values seem to be 10 times larger dat = data_n[data_n.Class <= 4].append(dat_d10)
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Check number of unique IDs:
print(dat.ID.unique().shape) # there are only 665 unique IDs print(dat.shape) # But there are 15776 rows of data? # look at how IDs repeated: dat.groupby('ID').count().sort_values(by = 'Class', ascending=False).head(20).plot(y = "Class", kind = "barh") plt.xlabel("Count") plt.ylabel("ID") plt.show # look at the unique ...
(710, 11) (627, 12)
MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
- I am not sure whether a sample can have multiple rows- But having multiple data points from a sample will violate the assumption of independence- So I filtered the data down to the samples with only one entry Handling missing values
datacc[datacc.isnull().any(axis=1)] # not a lot of NAs, and only in the Bare Nulei column # will remove these dataf = datacc.dropna() dataf.groupby('Class').count() # The two classes are fairly balanced
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Visualize the relationship between the different factors and cancer class:
# Transform data into the long format for vis dat_long_for_vis = pd.melt(dataf.iloc[:, 1:11], id_vars=['Class']) # Make histograms faceted by class bins = np.linspace(0, 9, 10) g = sns.FacetGrid(dat_long_for_vis, row = "variable", col="Class", margin_titles=True, sharey= False) g.map(plt.hist, "value", color="steelblu...
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Check correlations between features:
plt.figure(figsize=(8,8)) corr = dataf.iloc[:, 1:11].corr() mask = np.triu(np.ones_like(corr)) # Draw the heatmap with the mask and correct aspect ratio sns.heatmap(corr, mask = mask, cmap='Blues', annot=True, fmt='.2f', center=0, square=True, linewidths=.5, cbar_kws={"shrink": .5}) # The correlations a...
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Compare feature importance using modeling
# import libraries from sklearn.model_selection import train_test_split from sklearn.linear_model import LogisticRegression logi = LogisticRegression() logib = LogisticRegression(class_weight='balanced') from sklearn.model_selection import cross_validate from sklearn.metrics import recall_score from sklearn.metrics imp...
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Look at feature importanceUsing coefficients from the logistic regression model
features = pd.DataFrame(data = {'feature': list(X.columns), 'importance': model.coef_.tolist()[0]})\ .sort_values(by = 'importance') features
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Look at alternative feature importanceSince collecting these data could be expensive, can we collect less data?What if we only collect one type of the data?
# Function to test feature importance using just that feature def feature_test(name): scores = cross_validate(logib, X_train[name][:, np.newaxis], y_train, cv=5, scoring = 'recall_weighted') return(scores['test_score'].mean()) s = [] for name in list(X.columns): s.append([name, feature_test(name)]) features...
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Feature selection using recursive elimination
from sklearn.feature_selection import RFECV selector = RFECV(logib, step=1, cv=5, scoring = 'recall_weighted') selector.fit(X_train, y_train) selector.ranking_ reduced_features = [x for x, y in zip(list(X_train.columns),list(selector.ranking_)) if y == 1] scores = cross_validate(logib, X_train[reduced_features], y_tra...
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Exporting all feature importance measures for bubble charts
features_all = features2.merge(r_features, how = 'outer', left_on='feature', right_on='feature') features_all.to_csv("feature_importance.csv")
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MIT
DC2B_Sheng_Pei_Wang.ipynb
ShengpeiWang/Paneled_bubbles_R2D3_template
Imports
import pandas as pd import matplotlib.pyplot as plt from sklearn.cluster import KMeans from sklearn.mixture import GaussianMixture from sklearn.datasets import make_blobs
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MIT
Gaussian Mixture Model Assignment/Gaussian Mixture Model.ipynb
tusharsaxena250/AIML_Course
Dataset
data = pd.read_csv('Clustering_gmm.csv') plt.figure(figsize=(7,7)) plt.scatter(data["Weight"],data["Height"]) plt.xlabel('Weight') plt.ylabel('Height') plt.title('Data Distribution') plt.show() kmeans = KMeans(n_clusters=4) kmeans.fit(data) pred = kmeans.predict(data) frame = pd.DataFrame(data) frame['cluster'] = pred ...
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MIT
Gaussian Mixture Model Assignment/Gaussian Mixture Model.ipynb
tusharsaxena250/AIML_Course
GMM
data = pd.read_csv('Clustering_gmm.csv') gmm = GaussianMixture(n_components=4) gmm.fit(data) labels = gmm.predict(data) frame = pd.DataFrame(data) frame['cluster'] = labels frame.columns = ['Weight', 'Height', 'cluster'] color=['blue','green','cyan', 'black'] for k in range(0,4): data = frame[frame["cluster"]==k] ...
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MIT
Gaussian Mixture Model Assignment/Gaussian Mixture Model.ipynb
tusharsaxena250/AIML_Course