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TrainingTrain in two stages:1. Only the heads. Here we're freezing all the backbone layers and training only the randomly initialized layers (i.e. the ones that we didn't use pre-trained weights from MS COCO). To train only the head layers, pass `layers='heads'` to the `train()` function.2. Fine-tune all layers. For t...
# Train the head branches # Passing layers="heads" freezes all layers except the head # layers. You can also pass a regular expression to select # which layers to train by name pattern. model.train(dataset_train, dataset_val, learning_rate=config.LEARNING_RATE, epochs=1, layers='h...
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MIT
train_t_shirts.ipynb
lumstery/maskrcnn
Detection
class InferenceConfig(ShapesConfig): GPU_COUNT = 1 IMAGES_PER_GPU = 1 inference_config = InferenceConfig() # Recreate the model in inference mode model = modellib.MaskRCNN(mode="inference", config=inference_config, model_dir=MODEL_DIR) # Get path to saved ...
Processing 1 images image shape: (128, 128, 3) min: 5.00000 max: 255.00000 molded_images shape: (1, 128, 128, 3) min: -115.70000 max: 151.10000 image_metas shape: (1, 10) min: 0.00000 max: 128.00000
MIT
train_t_shirts.ipynb
lumstery/maskrcnn
Evaluation
# Compute VOC-Style mAP @ IoU=0.5 # Running on 10 images. Increase for better accuracy. image_ids = np.random.choice(dataset_val.image_ids, 10) APs = [] for image_id in image_ids: # Load image and ground truth data image, image_meta, gt_class_id, gt_bbox, gt_mask =\ modellib.load_image_gt(dataset_val, i...
mAP: 1.0
MIT
train_t_shirts.ipynb
lumstery/maskrcnn
Ex2 - Filtering and Sorting DataCheck out [Euro 12 Exercises Video Tutorial](https://youtu.be/iqk5d48Qisg) to watch a data scientist go through the exercises This time we are going to pull data directly from the internet. Step 1. Import the necessary libraries
import pandas as pd
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 2. Import the dataset from this [address](https://raw.githubusercontent.com/guipsamora/pandas_exercises/master/02_Filtering_%26_Sorting/Euro12/Euro_2012_stats_TEAM.csv). Step 3. Assign it to a variable called euro12.
euro12 = pd.read_csv('https://raw.githubusercontent.com/guipsamora/pandas_exercises/master/02_Filtering_%26_Sorting/Euro12/Euro_2012_stats_TEAM.csv', sep=',') euro12
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 4. Select only the Goal column.
euro12.Goals
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 5. How many team participated in the Euro2012?
euro12.shape[0]
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 6. What is the number of columns in the dataset?
euro12.info()
<class 'pandas.core.frame.DataFrame'> RangeIndex: 16 entries, 0 to 15 Data columns (total 35 columns): Team 16 non-null object Goals 16 non-null int64 Shots on target 16 non-null int64 Shots off target 16 non-null int64 Shooting Accuracy ...
BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 7. View only the columns Team, Yellow Cards and Red Cards and assign them to a dataframe called discipline
# filter only giving the column names discipline = euro12[['Team', 'Yellow Cards', 'Red Cards']] discipline
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 8. Sort the teams by Red Cards, then to Yellow Cards
discipline.sort_values(['Red Cards', 'Yellow Cards'], ascending = False)
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 9. Calculate the mean Yellow Cards given per Team
round(discipline['Yellow Cards'].mean())
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 10. Filter teams that scored more than 6 goals
euro12[euro12.Goals > 6]
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 11. Select the teams that start with G
euro12[euro12.Team.str.startswith('G')]
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 12. Select the first 7 columns
# use .iloc to slices via the position of the passed integers # : means all, 0:7 means from 0 to 7 euro12.iloc[: , 0:7]
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 13. Select all columns except the last 3.
# use negative to exclude the last 3 columns euro12.iloc[: , :-3]
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Step 14. Present only the Shooting Accuracy from England, Italy and Russia
# .loc is another way to slice, using the labels of the columns and indexes euro12.loc[euro12.Team.isin(['England', 'Italy', 'Russia']), ['Team','Shooting Accuracy']]
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BSD-3-Clause
02_Filtering_&_Sorting/Euro12/Exercises_with_Solutions.ipynb
arscool3/pandas_exercises
Data Processing
df = pd.read_csv('../data/num_data.csv') dataset = df dataset.shape def return_rmse(test,predicted): rmse = math.sqrt(mean_squared_error(test, predicted)) return rmse data_size = dataset.shape[0] train_size=int(data_size * 0.6) test_size = 100 valid_size = data_size - train_size - test_size training_set = datas...
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MIT
notebooks/LSTM4_pred_plots_12h.ipynb
harryli18/hybrid-rnn-models
Author : Dipjyoti Das (https://www.linkedin.com/in/dipjyotidas) This script is used to Train classifiers on the dataset and all the classifers are saved as pickle files. The pickled classfiers are used in the sentiment_analysis.py file. Import all the libraries
import nltk import random #from nltk.corpus import movie_reviews from nltk.classify.scikitlearn import SklearnClassifier import pickle from sklearn.naive_bayes import MultinomialNB, BernoulliNB from sklearn.linear_model import LogisticRegression, SGDClassifier from sklearn.svm import SVC, LinearSVC, NuSVC from nltk.c...
10664 Original Naive Bayes Algo accuracy percent: 73.64457831325302 Most Informative Features wonderful = True pos : neg = 21.8 : 1.0 engrossing = True pos : neg = 19.7 : 1.0 generic = True neg : pos = 16.9 : 1.0 ...
MIT
sentiment_analysis/training_classfiers.ipynb
dipjyotidas/NLP
We can run upto this cell one time. The sentiment analysis module uses the saved pickle objects and it also has the voting classfier and the sentiment function. The module saved is sentiment_analysis.py After importing the sentiment analysis module : We can use this to check if any sentiment is positive or negative w...
import sentiment_analysis as s # referencing the sentiment function of the sentiment_analysis.py script # Example - Pass through our own positive review print(s.sentiment("This movie was awesome! The story was great and performances were amazing, I really liked it!")) # Example - Pass through a negative review prin...
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MIT
sentiment_analysis/training_classfiers.ipynb
dipjyotidas/NLP
Physically Based Rendering {pbr_example}==========================VTK 9 introduced Physically Based Rendering (PBR) and we have exposedthat functionality in PyVista. Read the [blog aboutPBR](https://blog.kitware.com/vtk-pbr/) for more details.PBR is only supported for `pyvista.PolyData`{.interpreted-textrole="class"} a...
import pyvista as pv from pyvista import examples # Load the statue mesh mesh = examples.download_nefertiti() mesh.rotate_x(-90.) # rotate to orient with the skybox # Download skybox cubemap = examples.download_sky_box_cube_map()
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MIT
locale/examples/02-plot/pbr.ipynb
tkoyama010/pyvista-doc-translations
Let\'s render the mesh with a base color of \"linen\" to give it a metallooking finish.
p = pv.Plotter() p.add_actor(cubemap.to_skybox()) p.set_environment_texture(cubemap) # For reflecting the environment off the mesh p.add_mesh(mesh, color='linen', pbr=True, metallic=0.8, roughness=0.1, diffuse=1) # Define a nice camera perspective cpos = [(-313.40, 66.09, 1000.61), (0.0,...
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MIT
locale/examples/02-plot/pbr.ipynb
tkoyama010/pyvista-doc-translations
Show the variation of the metallic and roughness parameters.Plot with metallic increasing from left to right and roughnessincreasing from bottom to top.
colors = ['red', 'teal', 'black', 'orange', 'silver'] p = pv.Plotter() p.set_environment_texture(cubemap) for i in range(5): for j in range(6): sphere = pv.Sphere(radius=0.5, center=(0.0, 4 - i, j)) p.add_mesh(sphere, color=colors[i], pbr=True, metallic=i/4, roughness=j/5) p.vi...
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MIT
locale/examples/02-plot/pbr.ipynb
tkoyama010/pyvista-doc-translations
Combine custom lighting and physically based rendering.
# download louis model mesh = examples.download_louis_louvre() mesh.rotate_z(140) plotter = pv.Plotter(lighting=None) plotter.set_background('black') plotter.add_mesh(mesh, color='linen', pbr=True, metallic=0.5, roughness=0.5, diffuse=1) # setup lighting light = pv.Light((-2, 2, 0), (0, 0, 0), 'whi...
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MIT
locale/examples/02-plot/pbr.ipynb
tkoyama010/pyvista-doc-translations
Becquerel OverviewThis notebook demonstrates some of the main features and functionalities of `becquerel`:1. [`bq.Spectrum`](1.-bq.Spectrum) - [Constructor](1.1-From-scratch) - [Energy Calibration Models](1.2-Energy-Calibration-Models) - [File IO](1.3-From-File) - [Backrgound Subtraction](1.4-Background-Subtractio...
%pylab inline import pandas as pd import becquerel as bq from pprint import pprint np.random.seed(0)
Populating the interactive namespace from numpy and matplotlib
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
1. `bq.Spectrum`The core class in `bq` is `Spectrum`. This class contains a variety of tools for handling **single spectrum** data.Further details can be found in the [spectrum notebook](./spectrum.ipynb) and [spectrum plotting notebook](./plotting.ipynb).
bq.Spectrum?
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BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
1.1 From scratch
c, _ = np.histogram(np.random.poisson(50, 1000), bins=np.arange(101)) spec = bq.Spectrum(counts=c, livetime=60.) spec spec.plot(xmode='channels'); try: spec.plot(xmode='energy') except bq.PlottingError as e: print('ERROR:', e) plt.close('all')
ERROR: Spectrum is not calibrated, however x axis was requested as energy
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
1.2 Energy Calibration ModelsAll calibrations are instances of `Calibration`, which stores an arbitrary scalar function and its relevant parameters.Further details can be found in the [energycal notebook](./energycal.ipynb).
chlist = (40, 80) kevlist = (661.7, 1460.83) cal = bq.Calibration.from_points("p[0] + p[1] * x", chlist, kevlist, rng=(-1e3, 1e5)) print(cal.params) spec.apply_calibration(cal) print(spec) spec.plot(xmode='keV'); # New spec c, _ = np.histogram(np.random.poisson(50, 1000), bins=np.arange(101)) spec2 = bq.Spectrum(counts...
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BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
1.3 From File`becquerel` currently provides parsers for:- `SPE`- `SPC`- `CNF`
spec = bq.Spectrum.from_file('../tests/samples/1110C NAA cave pottery.Spe') spec spec.is_calibrated spec.plot(yscale='log', linewidth=0.5, ymode='counts'); %%capture spec = bq.Spectrum.from_file('../tests/samples/01122014152731-GT01122014182338-GA37.4963000N-GO122.4633000W.cnf') spec %%capture spec = bq.Spectrum.from_f...
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BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
1.4 Background Subtraction
spec = bq.Spectrum.from_file('../tests/samples/1110C NAA cave pottery.Spe') print(spec) bkg = bq.Spectrum.from_file('../tests/samples/1110C NAA cave background May 2017.spe') print(bkg) bkgsub = spec - bkg print('Total pottery countrate: {:6.3f}'.format(np.sum(spec.cps))) print('Total background countrate: {:6.3f}'....
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BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
1.5 Rebinning- deterministic (interpolation): `interpolation`- stochastic (convert to listmode): `listmode`Further details can be found in the [rebinning notebook](./rebinning.ipynb).
spec = bq.Spectrum.from_file('../tests/samples/1110C NAA cave pottery.Spe') bkg = bq.Spectrum.from_file('../tests/samples/1110C NAA cave background May 2017.spe') bkg_rebin = bkg.rebin(np.linspace(0., 3000., 16000)) try: bkgsub = spec - bkg_rebin except bq.SpectrumError as e: print('ERROR:', e) spec_rebin = spe...
becquerel/core/spectrum.py:815: SpectrumWarning: Subtraction of counts-based specta, spectra have been converted to CPS warnings.warn(
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
1.6 ScalingMultiplication or division will be applied to the data of the spectrum. The following decimates a spectrum by dividing by 10:
spec = bq.Spectrum.from_file('../tests/samples/1110C NAA cave background May 2017.spe') spec_div = spec / 10 print(spec_div)
SpeFile: Reading file ../tests/samples/1110C NAA cave background May 2017.spe becquerel.Spectrum start_time: None stop_time: None realtime: None livetime: None is_calibrated: True num_bins: 16384 gross_counts: (1.0529+/-0.0010)e+05 gross_cps: None f...
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
One might however want to decimate a spectrum in a way consistent with Poisson statistics. For that there is the `downsample` method:
spec_downsample = spec.downsample(10, handle_livetime='reduce') print(spec_downsample) ax = spec_div.plot(label='div', ymode='counts', yscale='log') spec_downsample.plot(ax=ax, label='downsample', ymode='counts') ax.legend() ax.set_xlim(600, 620) ax.set_ylim(1.3, 5e1);
becquerel.Spectrum start_time: None stop_time: None realtime: None livetime: 43781.7 is_calibrated: True num_bins: 16384 gross_counts: (1.0484+/-0.0033)e+05 gross_cps: 2.395+/-0.008 filename: None
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
1.7 Automatic CalibrationThere are utilities in Becquerel for automatically finding peaks in a raw spectrum and matching them to a list of energies as a first pass at a full calibration.Further details can be found in the [autocal notebook](./autocal.ipynb).Let's load an uncalibrated sodium iodide spectrum that has Co...
spec = bq.Spectrum.from_file('../tests/samples/digibase_5min_30_1.spe') fig, ax = plt.subplots(1, figsize=(12, 6)) spec.plot(ax=ax, linewidth=0.5, xmode='channels', yscale='log') plt.xlim(0, len(spec)); # filter the spectrum kernel = bq.GaussianPeakFilter(400, 20, 3) finder = bq.PeakFinder(spec, kernel) finder.find_pea...
found best gain: 6.371703 keV/channel
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
2. Nuclear Data 2.1 `bq.Element`
e1 = bq.Element('Cs') e2 = bq.Element(55) e3 = bq.Element('55') print(e1, e2, e3) print(e1 == e2 == e3) print('{:%n(%s) Z=%z}'.format(e1)) pprint(e1.__dict__, width=10)
Cesium(Cs) Z=55 Cesium(Cs) Z=55 Cesium(Cs) Z=55 True Cesium(Cs) Z=55 {'Z': 55, 'atomic_mass': 132.91, 'name': 'Cesium', 'symbol': 'Cs'}
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
2.2 `bq.Isotope`Further examples of `Isotope` and `IsotopeQuantity` can be found in the [isotopes notebook](./isotopes.ipynb).
i1 = bq.Isotope('Cs-137') i2 = bq.Isotope('137CS') i3 = bq.Isotope('Cs', 137) i4 = bq.Isotope('Cesium-137') i5 = bq.Isotope('137CAESIUM') print(i1, i2, i3, i4, i5) print(i1 == i2 == i3 == i4 == i5)
Cs-137 Cs-137 Cs-137 Cs-137 Cs-137 True
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
Isotope names and properties
iso = bq.Isotope('Tc-99m') print(iso) print('{:%n(%s)-%a%m Z=%z}'.format(iso)) pprint(iso.__dict__) print('half-life: {:.2f} hr'.format(iso.half_life / 3600))
Tc-99m Technetium(Tc)-99m Z=43 {'A': 99, 'M': 1, 'N': 56, 'Z': 43, 'atomic_mass': 98, 'm': 'm', 'name': 'Technetium', 'symbol': 'Tc'} half-life: 6.01 hr
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
More isotope properties such as half-life, stability, and natural abundance are available:
for a in range(39, 42): iso = bq.Isotope('Potassium', a) print('') print('Isotope: {}'.format(iso)) print(' Spin-parity: {}'.format(iso.j_pi)) if iso.abundance is not None: print(' Abundance: {:.2f}%'.format(iso.abundance)) print(' Stable? {}'.format(iso.is_stable)) i...
Isotope: K-39 Spin-parity: 3/2+ Abundance: 93.26+/-0.00% Stable? True Isotope: K-40 Spin-parity: 4- Abundance: 0.01+/-0.00% Stable? False Half-life: 1.248e+09 years Decay modes: (['EC', 'B-'], [10.72, 89.28]) Isotope: K-41 Spin-parity: 3/2+ Abundance: 6.73+/-...
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
2.3 `bq.IsotopeQuantity` Source activity on a given dateHere's a check source activity on today's date:
ba133_chk = bq.IsotopeQuantity('ba133', date='2013-05-01', uci=10.02) ba133_chk.uci_now()
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BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
Or for another date:
ba133_chk.uci_at('2018-02-16')
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BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
2.4 `bq.materials`Access the [NIST X-ray mass attenuation coefficients database](https://www.nist.gov/pml/x-ray-mass-attenuation-coefficients) for [elements](https://physics.nist.gov/PhysRefData/XrayMassCoef/tab1.html) and [compounds](https://physics.nist.gov/PhysRefData/XrayMassCoef/tab2.html) and also data from the ...
mat_data = bq.materials.fetch_materials() pprint(list(mat_data.keys())) pprint(mat_data['Air, Dry (near sea level)'], indent=4)
{ 'density': 0.001205, 'formula': '-', 'source': 'NIST ' '(http://physics.nist.gov/PhysRefData/XrayMassCoef/tab2.html)', 'weight_fractions': [ 'C 0.000124', 'N 0.755268', 'O 0.231781', 'Ar 0.012827']}
BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
2.5 `bq.nndc`Tools to query the [National Nuclear Data Center databases](https://www.nndc.bnl.gov/nudat2/) to obtain decay radiation, branching ratios, and many other types of nuclear data.Further details and examples can be found in the [nndc notebook](./nndc.ipynb) and the [nndc_chart_of_nuclides notebook](./nndc_ch...
rad = bq.nndc.fetch_decay_radiation(nuc='Co-60', type='Gamma', i_range=(5, None)) cols = ['Z', 'Element', 'A', 'Decay Mode', 'Radiation', 'Radiation Energy (keV)', 'Radiation Intensity (%)', 'Energy Level (MeV)'] display(rad[cols]) # NNDC nuclear wallet cards are used by bq.Isotope but can be accessed directly ...
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BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
2.6 `bq.xcom`The [NIST XCOM photon cross sections database](https://www.nist.gov/pml/xcom-photon-cross-sections-database) can be [queried](https://physics.nist.gov/PhysRefData/Xcom/html/xcom1.html) in `becquerel`.Further details can be found in the [xcom notebook](./xcom.ipynb)For example, here is how to access the cr...
# query XCOM by element symbol data = bq.xcom.fetch_xcom_data('Pb', e_range_kev=[10., 3000.]) plt.figure() for field in ['total_w_coh', 'total_wo_coh', 'coherent', 'incoherent', 'photoelec', 'pair_nuc', 'pair_elec']: plt.semilogy(data.energy, data[field], label=field) plt.xlim(0, 3000) plt.xlabel('En...
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BSD-3-Clause-LBNL
examples/overview.ipynb
werthm/becquerel
1. set_index 2. reset_index
import pandas as pd df = pd.read_csv("C:/Users/deepusuresh/Documents/Data Science/08. Data Sets/Pandas.csv") df df.index df.set_index('day') # df.set_index('day',inplace=True) df df.reset_index(inplace=True) df df.set_index('event',inplace=True) df
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CNRI-Python
7_Change_Index and Column_Header/2_Set_Index.ipynb
sureshmecad/Pandas
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#url = "C:/Users/deepusuresh/Documents/Data Science/01. Python/3. PANDAS/1. Data Frame" df = pd.read_csv('C:/Users/deepusuresh/Documents/Data Science/01. Python/3. PANDAS/1. Data Frame/IMDB-Movie-Data.csv') df.head(3) df = pd.read_csv("C:/Users/deepusuresh/Documents/Data Science/01. Python/3. PANDAS/1. Data Frame/IMDB...
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CNRI-Python
7_Change_Index and Column_Header/2_Set_Index.ipynb
sureshmecad/Pandas
We're loading this dataset from a CSV and designating the movie titles to be our index.
df = pd.read_csv("C:/Users/deepusuresh/Documents/Data Science/01. Python/3. PANDAS/1. Data Frame/IMDB-Movie-Data.csv", index_col="Title") df.head(3)
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CNRI-Python
7_Change_Index and Column_Header/2_Set_Index.ipynb
sureshmecad/Pandas
![DataCamp logo](https://camo.githubusercontent.com/37701d42d9ffe96d33524b7fb8d965d2f7ae8380/68747470733a2f2f6769746875622e636f6d2f6461746163616d702f707974686f6e2d6c6976652d747261696e696e672d74656d706c6174652f626c6f622f6d61737465722f6173736574732f6461746163616d702e7376673f7261773d54727565) Visualizing Big Data in R (A...
rlib <- "~/lib" dir.create(rlib) .libPaths(rlib) library(remotes) install_version("hexbin", "1.28.1", lib = rlib, upgrade = "never") install_version("fst", "0.9.2", lib = rlib, upgrade = "never") install_version("ggcorrplot", "0.1.3", lib = rlib, upgrade = "never") install_version("trelliscopejs", "0.2.5", lib = rlib, ...
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Chapter 1: Too many points - point size, transparency, transformation Here, you'll look at the LA home prices dataset to explore ways of reducing overplotting. Learning objectives- Understands that one cause of overplotting in scatter plots is simply that there are too many points.- Can apply point size adjustments, ...
# Load tibble, ggplot2, and a CSV reader library(readr) # or library(data.table) library(tibble) library(ggplot2)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Exploring the datasetThe dataset is here. Run this cell!
data_file <- "https://raw.githubusercontent.com/datacamp/Visualizing-Big-Data-in-R-live-training/master/data/LAhomes.csv"
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Read in the dataset from `data_file`, assigning the result to `la_homes`. Explore it (using whichever functions you like).
# Read data_file from CSV la_homes <- read_csv(data_file) # Explore it glimpse(la_homes)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
- `price` is the sale price of the home, in USD.- `sqft` is the area of the home in square feet (about 0.1 square meters).Using `la_homes`, draw a scatter plot of `price` versus `sqft`.
# Using la_homes, plot price vs. sqft with point layer ggplot(la_homes, aes(sqft, price)) + geom_point()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Changing point sizeNotice that points in the plot are heavily overplotted in the bottom left corner.Redraw the basic scatter plot, changing the point size to `0.5`.
# Draw same scatter plot, with size 0.5 ggplot(la_homes, aes(sqft, price)) + geom_point(size = 0.5)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Redraw the basic scatter plot, changing the point shape to be "pixel points".
# Draw same scatter plot, with pixel shape ggplot(la_homes, aes(sqft, price)) + geom_point(shape = ".")
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Using transparencyRedraw the basic scatter plot, changing the transparency level of points to `0.25`. Set a white background by using ggplot2's black and white theme.
# Draw same scatter plot, with transparency 0.25 and black & white theme ggplot(la_homes, aes(sqft, price)) + geom_point(alpha = 0.25) + theme_bw()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Transform the axesMost of the plots are stuck in the bottom-left corner. Transform the x and y axes to spread points more evenly throughout.Redraw the basic scatter plot, applying a log10 transformation to the x and y scales.
# Draw same scatter plot, with log-log scales ggplot(la_homes, aes(sqft, price)) + geom_point() + scale_x_log10() + scale_y_log10()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Redraw the scatter plot using all three tricks at once.- Set the point size to `0.5`.- Set the point transparency to `0.25`.- Using log10 transformations for the x and y scales.- Use the black and white theme.
# Draw same scatter plot, with all 3 tricks ggplot(la_homes, aes(sqft, price)) + geom_point(size = 0.5, alpha = 0.25) + scale_x_log10() + scale_y_log10() + theme_bw()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Hex plotsDraw a hex plot of `price` versus `sqft`.
# Using la_homes, plot price vs. sqft with hex layer ggplot(la_homes, aes(sqft, price)) + geom_hex()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Redraw the hex plot, applying log10 transformations to the x and y scales.
# Draw same hex plot, with log-log scales ggplot(la_homes, aes(sqft, price)) + geom_hex() + scale_x_log10() + scale_y_log10()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Which statement about the trend is true?- [ ] Price increases roughly linearly with area.- [ ] Price increases roughly linearly with log area.- [ ] Log price increases roughly linearly with area.- [x] Log price increases roughly linearly with log area. Which statement about the overplotting is true?- [ ] The majority o...
library(readr) library(dplyr) library(ggplot2)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Importing and exploring the dataThe dataset is here. Run this chunk!
data_file <- "https://raw.githubusercontent.com/datacamp/Visualizing-Big-Data-in-R-live-training/master/data/LAhomes.csv"
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Import the LA homes dataset from `data_file`, assigning to `la_homes`.
# Import data_file la_homes <- read_csv(data_file)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
- `bed` contains the number of bedrooms in the home.Take a look at the distinct values in `bed` using `distinct()`.
# Look at the distinct values of the bed column la_homes %>% distinct(bed)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Notice that the number of bedrooms is always an integer and sometimes zero. Scatter plots of price vs. bedroomsUsing `la_homes`, draw a scatter plot of `price` versus `bed`.
# Using la_homes, plot price vs. bed with a point layer ggplot(la_homes, aes(bed, price)) + geom_point()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Draw the same plot again, this time jittering the points along the x-axis.- Use a maximum jitter distance of `0.4` in the x direction.- Don't jitter in the y direction.
# Draw the previous plot but jitter points with width 0.4 ggplot(la_homes, aes(bed, price)) + geom_jitter(width = 0.4)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Most of the points are near the bottom of the plot.Draw the same jittered plot again, this time using a log10 transformation on the y-scale.
# Draw the previous plot but use a log y-axis ggplot(la_homes, aes(bed, price)) + geom_jitter(width = 0.4) + scale_y_log10()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Scatter plots of bathrooms vs. bedrooms- `bath` contains the number of bathrooms in the home.Take a look at the distinct values in `bath` using `distinct()`.
# Look at the distinct values of the bath column la_homes %>% distinct(bath)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Notice that the dataset includes half and quarter bathrooms (whatever they are).Draw a scatter plot of `bath` versus `bed`.
# Using la_homes, plot bath vs. bed with a point layer ggplot(la_homes, aes(bed, bath)) + geom_point()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Draw the same plot again, this time jittering the points.- Use a maximum jitter distance of `0.4` in the x direction.- Use a maximum jitter distance of `0.05` in the y direction.
# Using la_homes, plot price vs. bed with a jittered point layer ggplot(la_homes, aes(bed, bath)) + geom_jitter(width = 0.4, height = 0.05)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Filtering and transformationThere are three homes with 10 or more bedrooms. These constitute outliers, and for the purpose of drawing nicer plots, we're going to remove them.Filter `la_homes` for rows where `bed` is less than `10`, assigning to `la_homes10`. Count the number of rows you removed to check you've done it...
# Filter for bed less than 10 la_homes10 <- la_homes %>% filter(bed < 10) # Calculate the number of outliers you removed nrow(la_homes) - nrow(la_homes10)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Draw the same jittered scatter plot again, this time using the filtered dataset (`la_homes10`). As before, use a jitter width of `0.4` and a jitter height of `0.05`.
# Draw the previous plot, but with the la_homes10 dataset ggplot(la_homes10, aes(bed, bath)) + geom_jitter(width = 0.4, height = 0.05)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Most of the points are towards the bottom left of the plot.Draw the same jittered scatter plot again, this time applying square-root transformations to the x and y scales.
# Draw the previous plot but with sqrt-sqrt scales ggplot(la_homes10, aes(bed, bath)) + geom_jitter(width = 0.4, height = 0.05) + scale_x_sqrt() + scale_y_sqrt()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Refine the plot one more time, by making the points transparent.Draw the previous plot again, setting the transparency level to 0.25 (and using a black and white theme).
ggplot(la_homes10, aes(bed, bath)) + geom_jitter(width = 0.4, height = 0.05, alpha = 0.25) + scale_x_sqrt() + scale_y_sqrt() + theme_bw()
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Chapter 3: Too many variables - correlation heatmaps Here you'll look at a dataset on Scotch whisky preferences. Learning objectives- Can draw a correlation heatmap.- Can use hierarchical clustering to order cells in a correlation heatmap.- Can adjust the color scale in a correlation heatmap.- Can interpret a correlat...
library(fst) library(tibble) library(ggplot2) library(ggcorrplot)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Get the datasetThe dataset is a modified version of `bayesm::Scotch`. - See https://www.rdocumentation.org/packages/bayesm/topics/Scotch for details.- Each observation is a survey response indicating the brands of Scotch consumed in the last year. Run this to download the data file.
download.file( "https://github.com/datacamp/Visualizing-Big-Data-in-R-live-training/raw/master/data/scotch.fst", "scotch.fst" )
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Import the dataset from `scotch.fst` and assign to `scotch`.
# Import from scotch.fst scotch <- read_fst("scotch.fst") # Explore the dataset, however you wish glimpse(scotch)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Draw a basic correlation heatmapCalculate the correlation matrix for `scotch`, assigning to `correl`.
# Calculate the correlation matrix correl <- cor(scotch)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Draw a correlation heatmap of it (no customization).
# Draw a correlation heatmap ggcorrplot(correl)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Drop redundant cellsDraw the previous plot again, this time only showing the upper triangular portion of the correlation matrix.
# Draw a correlation heatmap of the upper triangular portion ggcorrplot(correl, type = "upper")
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Use hierarchical clusteringDraw the previous plot again, this time using hierarchical clustering to reorder cells.
# Draw a correlation heatmap of the upper triangular portion ggcorrplot(correl, type = "upper", hc.order = TRUE)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Override the color scaleSet the diagonal values in the correlation matrix to `NA`, then calculate the range of the correlation matrix.
# Set the diagonals of correl to NA diag(correl) <- NA # Calculate the range of correl (removing NAs) range(correl, na.rm = TRUE)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
We have both positive and negative correlations, so this is a slightly trickier situation than in the slides. We want a symmetric color scale centered on zero.Define the limits of the color scale.- Calculate the `max`imum `abs`olute correlation (removing NAs). Assign to `max_abs_correl`.- Add some padding to `max_abs_c...
# Calculate the largest absolute correlation (removing NAs) max_abs_correl <- max(abs(correl), na.rm = TRUE) # Add some padding max_abs_correl_padded <- max_abs_correl + 0.02 # Define limits from -max_abs_correl_padded to max_abs_correl_padded scale_limits <- c(-max_abs_correl_padded, max_abs_correl_padded)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Draw the previous plot again, this time overriding the fill color scale.- Add `scale_fill_gradient2()`.- Pass the scale limits.- Set the `high` argument to `"red"`.- Set the `mid` argument to `"white"`.- Set the `low` argument to `"blue"`.
# Draw a correlation heatmap of the upper triangular portion # Override the fill scale to use a 2-way gradient ggcorrplot(correl, type = "upper", hc.order = TRUE) + scale_fill_gradient2( limits = scale_limits, high = "red", mid = "white", low = "blue" )
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Interpreting correlation heatmapsDrinkers of Glenfiddich are most likely to also drink which other whisky?- [ ] Scoresby rare- [ ] J & B- [x] Glenlivet- [ ] Black & White- [ ] Chivas Regal Drinkers of Knockando are most likely to also drink which other whisky?- [ ] Dewar's White Label- [ ] Johnny Walker Red Label- [ ]...
library(fst) library(tibble) library(ggplot2) library(trelliscopejs)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Get the dataset Run this to download the data file.
download.file( "https://github.com/datacamp/Visualizing-Big-Data-in-R-live-training/raw/master/data/dow_stock_prices.fst", "dow_stock_prices.fst" )
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Import the DJIA data from `dow_stock_prices.fst`, assigning to `dow_stock_prices`. Explore it however you wish.
# Import the dataset from dow_stock_prices.fst dow_stock_prices <- read_fst("dow_stock_prices.fst") # Explore the dataset, however you wish glimpse(dow_stock_prices)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
- `symbol`: The stock ticker symbol (unique ID for company).- `company`: Human-readable company name.- `sector`: Business sector that the company participates in.- `date`: Date on which price and volume data was calculated for.- `volume`: Number of shares traded on `date`.- `adjusted`: Price of 1 share, after adjusting...
# Get the range of the dates in dow_stock_prices range(dow_stock_prices$date)
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
From ggplot2 to trelliscopejsUsing `dow_stock_prices`, draw a line plot of `relative` versus `date`, faceted by `symbol`.
# Using dow_stock_prices, plot relative vs. date # as a line plot # faceted by symbol ggplot(dow_stock_prices, aes(date, relative)) + geom_line() + facet_wrap(vars(symbol))
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Redraw the previous plot, this time as a trelliscope plot (no customization). - Set the `path` argument to `"trelliscope/basic"`.
# Same plot as before, using trelliscope ggplot(dow_stock_prices, aes(date, relative)) + geom_line() + facet_trelliscope( vars(symbol), path = "trelliscope/basic" )
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Run this next line to open the plot in a new browser tab.
# Browse for the plot URL browseURL("trelliscope/basic/index.html")
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Improving the plotWe can improve on the previous plot by customizing it.Redraw the previous plot, with the following changes.- Set the `path` argument to `"trelliscope/improved"`.- Set the plot title to `Dow Jones Industrial Average`.- Set the plot description to `Share prices 2017-01-01 to 2020-01-01`.- Arrange the p...
# Draw the same plot again, customizing the display # Set path, name, desc, nrow, ncol, width ggplot(dow_stock_prices, aes(date, relative)) + geom_line() + facet_trelliscope( vars(symbol), path = "trelliscope/improved", name = "Dow Jones Industrial Average", desc = "Share prices 2017-01-01 to 2020-0...
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Open the plot in a new browser tab.
# Browse for the plot URL browseURL("trelliscope/improved/index.html")
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
LabelsAdd the `company` to the labels shown on each panel. Filtering Which `sector` contains the most companies?- [ ] Health Care- [x] Information Technology- [ ] Consumer Staples- [ ] Industrials- [ ] Financials Which `Energy` sector company began 2020 with a lower share price than 2017?- [ ] CVX (Chevron)- [x] XOM ...
# This time plot adjusted vs. date # Use a free y-scale ggplot(dow_stock_prices, aes(date, adjusted)) + geom_line() + facet_trelliscope( vars(symbol), path = "trelliscope/yscale", name = "Dow Jones Industrial Average", desc = "Share prices 2017-01-01 to 2020-01-01", nrow = 5, ncol = 2, ...
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Open the plot in a new browser tab.
# Browse for the plot URL browseURL("trelliscope/yscale/index.html")
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Which company, at it's maximum, had the highest price for 1 share?- [x] BA (Boeing)- [ ] GS (Goldman Sachs Group)- [ ] UNH (UnitedHealth Group)- [ ] AAPL (Apple)- [ ] MMM (3M) Interactive plotting with plotlyBy using plotly to create each panel, each panel becomes interactive. Hover over the line to see the values of ...
# Redraw the last plot using plotly for panels ggplot(dow_stock_prices, aes(date, adjusted)) + geom_line() + facet_trelliscope( vars(symbol), path = "trelliscope/plotly", name = "Dow Jones Industrial Average", desc = "Share prices 2017-01-01 to 2020-01-01", nrow = 5, ncol = 2, width = 1...
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Open the plot in a new browser tab.
# Browse for the plot URL browseURL("trelliscope/plotly/index.html")
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MIT
notebooks/visualizing-big-data-in-r-codealong-answers.ipynb
marsanul/visualizacionbigdata
Image a cube's vertices grayscale: 0 is black, higher intensities are lighter here intensities are ranges. so foreground should have smaller range, and therefore be darker Optical axis +Z (default) Centered
from camera_model_distort import Camera_model import attitude_utils as attu import optics_utils as optu import itertools from time import time ap = attu.Euler_attitude() object_locations = optu.make_cube(10.,1.0*np.asarray([0,0,200])) object_locations = optu.make_grid() print(object_locations.shape) z = np.expand_dims...
Euler321 Attitude (738, 2) (738, 1) Euler321 Attitude Overriding focal length using FOV: 0.7853981633974483 13.361957121094465 K: [[133.61957121 20. 50. ] [ 0. 133.61957121 50. ] [ 0. 0. 1. ]] C_cb: [[ 1. 0. -0.] [ 0. 1. 0.] [ 0. 0. 1.]] t: ET: ...
MIT
Imaging/Test_distort.ipynb
CHEN-yongquan/Asteroid_CPO_seeker
Positive Roll, Image should move down in FOV
object_locations = optu.make_cube(10.,1.0*np.asarray([0,0,200])) agent_location = 1.0*np.asarray([0,0,100]) object_intensities = np.linalg.norm(object_locations-agent_location,axis=1)-50 fov=np.pi/4 yaw = 0.0 pitch = 0.0 roll = np.pi/16 agent_q = np.asarray([yaw,pitch,roll]) C_cb = optu.rotate_optical_axis(0.0, 0....
Euler321 Attitude Overriding focal length using FOV: 0.7853981633974483 13.361957121094465 K: [[133.61957121 0. 50. ] [ 0. 133.61957121 50. ] [ 0. 0. 1. ]] C_cb: [[ 1. 0. -0.] [ 0. 1. 0.] [ 0. 0. 1.]] t: pixel_locs.shape: (8, 2) ET: 0.0016019...
MIT
Imaging/Test_distort.ipynb
CHEN-yongquan/Asteroid_CPO_seeker
Negative Pitch, Image should move right
object_locations = optu.make_cube(10.,1.0*np.asarray([0,0,200])) agent_location = 1.0*np.asarray([0,0,100]) object_intensities = np.linalg.norm(object_locations-agent_location,axis=1)-50 fov=np.pi/4 yaw = 0.0 pitch = -np.pi/16 roll = 0.0 agent_q = np.asarray([yaw,pitch,roll]) C_cb = optu.rotate_optical_axis(0.0, 0...
Euler321 Attitude Overriding focal length using FOV: 0.7853981633974483 13.361957121094465 K: [[133.61957121 0. 50. ] [ 0. 133.61957121 50. ] [ 0. 0. 1. ]] C_cb: [[ 1. 0. -0.] [ 0. 1. 0.] [ 0. 0. 1.]] t: pixel_locs.shape: (8, 2) ET: 0.0051801...
MIT
Imaging/Test_distort.ipynb
CHEN-yongquan/Asteroid_CPO_seeker
Positive Yaw should rotate image
object_locations = optu.make_cube(10.,1.0*np.asarray([0,0,200])) agent_location = 1.0*np.asarray([0,0,100]) object_intensities = np.linalg.norm(object_locations-agent_location,axis=1)-50 fov=np.pi/4 yaw = np.pi/8 pitch = 0.0 roll = 0.0 agent_q = np.asarray([yaw,pitch,roll]) C_cb = optu.rotate_optical_axis(0.0, 0.0...
[[-7. -6. -5. -4. -3. -2. -1. 0. 1. 2. 3. 4. 5. 6. 7.] [-3. -3. -3. -3. -3. -3. -3. -3. -3. -3. -3. -3. -3. -3. -3.]] [[-7. -6. -5. -4. -3. -2. -1. 0. 1. 2. 3. 4. 5. 6. 7.] [-2. -2. -2. -2. -2. -2. -2. -2. -2. -2. -2. -2. -2. -2. -2.]] [[-7. -6. -5. -4. -3. -2. -1. 0. 1. 2. 3. 4. 5. 6. 7.] [-...
MIT
Imaging/Test_distort.ipynb
CHEN-yongquan/Asteroid_CPO_seeker
Two interesting tables: seattlecrimeincidents first half of 2015 census_data
# running a simple SQL command %sql select * from seattlecrimeincidents limit 10; # Show specific columns %sql select "Offense Type",latitude,longitude from seattlecrimeincidents limit 10; %%sql -- select rows select "Offense Type", latitude, longitude, month from seattlecrimeincidents where "Offense Type" ='THEFT-...
17 rows affected.
BSD-2-Clause
save/13-Structured-Query-Language/ClassNotes.ipynb
ecl95/LectureNotes
1 212 32123 4321234543212345
num=5 for i in range(1,num+1): for j in range(1,num-i+1): print(end=" ") for j in range(i,0,-1): print(j,end="") for j in range(2,i+1): print(j,end="") print()
1 212 32123 4321234 543212345
Apache-2.0
notebooks/pyramid_pattern_1.ipynb
neso613/python_coding