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def push_changelog_file(conn_api, changelog_file): """ Fixture to push to the FIRE archive a mock CHANGELOG to be used with the CurrentTree.run function Returns ------- FIRE path of the object that has been pushed """ conn_api.push_object(fileO=changelog_file, fire_...
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import hashlib def get_sha256(local_path): """ Computes the sha256 of a local file. :param local_path: string/path to file :return: sha256 checksum """ file_hash = hashlib.sha256() with open(local_path, "rb") as in_f: for chunk in iter(lambda: in_f.read(512 * file_hash.block_size)...
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def gross_lev(positions): """ Calculates the gross leverage of a strategy. Parameters ---------- positions : pd.DataFrame Daily net position values. - See full explanation in tears.create_full_tear_sheet. Returns ------- pd.Series Gross leverage. """ e...
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import random def choice(*args): """ Wrapper for random.choice that takes variadic arguments. This allows iterables and sets to also be used. Example usage:: x = {1, 2, 3, 4, 5} y = choice(*x) """ return random.choice(args)
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def getSectionNumber(header): """ Retrieve the section number of the given node. @type header: A DOM Node or L{None} @param header: The section from which to extract a number. The section number is the value of this node's first child. @return: C{None} or a C{str} giving the section number. ...
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def deduce_loop_size(subject: int, public_key: int) -> int: """ Deduce the loop size for ``public_key`` by transforming the ``subject``. :return: The loop size, or -1 if no success """ value = 1 for loop_ct in range(100000000): if value == public_key: return loop_ct ...
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import re def _dots_to_triple_under(astring): """Convert all instances of '.' to '___'.""" return re.sub(r'\.', '___', astring)
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def macd(df, n_fast=12, n_slow=26, n_signal=9): """Calculate MACD, MACD Signal and MACD difference :param df: pandas.DataFrame :param n_fast: :param n_slow: :return: pandas.DataFrame """ EMAfast = df.ewm(span=n_fast, min_periods=n_slow).mean() EMAslow = df.ewm(span=n_slow, mi...
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def swap(pair): """Swap the items in a pair. Return tuple. >>> swap((1, 2)) (2, 1) """ x, y = pair return y, x
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def arbg_int_to_rgba(argb_int): """Convert ARGB integer to RGBA array.""" red = (argb_int >> 16) & 255 green = (argb_int >> 8) & 255 blue = argb_int & 255 alpha = (argb_int >> 24) & 255 return [red, green, blue, alpha]
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def replace_country(record: dict, country_name: str, area_name: str): """ Replace country name with an `area_covered` name. Promote a string in `area_covered` to `country_territory_area`. Applies to records where a WHO recognised country is defined as an administrative region of a different countr...
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def response_to_handler_out(response): """ Build expected handler return from a Response """ return dict( statusCode=response.status, body=response.body, headers={ 'Content-Language': 'en', 'Content-Length': len(response.body), 'Content-Type': ...
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import hashlib import json def meta_hasher(**metadata): """ Compute the metadata dictionary and hashcode for this run. We use the hashcodes to distinguish runs. """ # compute metadata once for this batch hashcode_this = hashlib.sha1(json.dumps(metadata, ensure_ascii=True,sort_keys=True,default=str ).encode(...
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import json def load_dict(file_path): """Load dictionary from ``file_path``""" # Check if file exists try: file = open(file_path) except OSError: print(f"Could not read file from {file_path}\nReturn None") return None # Load file with file as json_file: return...
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def _models_save_all_function_name(model): """Returns the name of the function to save a list of models as existing records""" return '{}_save_all_existing'.format(model.get_table_name())
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def hexd(digit): """ Returns a hex digit '0'..'F' for an integer 0..15 :param digit: integer 0..15 :returns: an ASCII hex character '0'..'F' """ if digit < 10: return chr(ord('0')+digit) else: return chr(ord('A')-10+digit)
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def inline_code(text): """Return formatted inline code. >>> inline_code("This text is code") '`This text is code`' """ return f"`{str(text)}`"
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def lookup_page(tiff_page): """Obtain relevant information from a TiffPage object""" xy_dim = (tiff_page.image_width, tiff_page.image_length) description = tiff_page.image_description.decode('utf-8') return xy_dim, description
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def split_args(args): """Split command line args in 3 groups: - head, containing the initial options - body, containing everything after head, up to the first option - tail, containing everything after body """ head = [] body = [] tail = [] for arg in args: if arg.startswith...
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def calculate_packet_loss_values(dropped_packets_rate, total_packets_rate): """ Calculate the packet loss (percentage) Args: dropped_packets_rate (float): The rate of dropped packets (packets/sec) total_packets_rate (float): The rate of total packets (packets/sec) Returns: float: T...
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def rescale_read_counts(c0, c1, max_allowed_reads=100): """Ensures that n_total <= max_allowed_reads, rescaling if necessary.""" Total = c0 + c1 if Total > max_allowed_reads: c0 = int(max_allowed_reads * float(c0/Total)) c1 = max_allowed_reads - c0 return c0, c1
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def parseSubscripts(subscr: str): """ Parse the subscripts for a primitive category """ if subscr: return subscr[1:-1].split(",") return []
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def build_image_args(version): """ Returns a list of --build-arg command line arguments that are used by the docker build command. Arguments: - version: Can be a str, in which case it's considered the PRODUCT or a dict. """ result = [] if isinstance(version, dict): ...
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import math def entropyOfList(ls): """ Given a list of some items, compute entropy of the list The entropy is sum of -p[i]*log(p[i]) for every unique element i in the list, and p[i] is its frequency """ elements = {} # 计数 后面优化 for e in ls: elements[e] = elements.get(e, 0) + 1 leng...
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def cut_text_below(text, depth): """Simplify text to only show the top parts of a tree >>> print(cut_text_below("(ROOT (NP (PRP I)) (VP (VBD ran) (NP (NN home))))", 1)) (ROOT) >>> print(cut_text_below("(ROOT (NP (PRP I)) (VP (VBD ran) (NP (NN home))))", 2)) (ROOT (NP) (VP)) >>> print(cut_text_below("(ROOT (NP (PR...
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def is_enum_value(enum_class, potential_value): """ A utility function that checks if the enumeration class contains the provided value. Args: enum_class (class): One of the enumeration classes found in this file. potential_value (int, string): A potential value of the enumeration ...
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import math def factorial(n): """Return the factorial of n, an exact integer >= 0. >>> [factorial(n) for n in range(6)] [1, 1, 2, 6, 24, 120] >>> factorial(30) 265252859812191058636308480000000 >>> factorial(-1) Traceback (most recent call last): ... ValueError: n must be >= 0...
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from typing import List from typing import Any from typing import Tuple import random def consistent_shuffle(*lists: List[List[Any]]) -> Tuple[List[Any], ...]: """ Shuffle lists consistently. Parameters ---------- *lists Variable length number of lists Returns ------- shuffle...
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def get_min_max(ints): """ Return a tuple(min, max) out of list of unsorted integers. Args: ints(list): list of integers containing one or more integers """ min_num = ints[0] max_num = ints[0] for i in ints: if i <min_num: min_num = i elif i >max_num: max_num = i...
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def read_test(data_path): """Read a wd_*.f1 file in NET-COLING2018 dataset and returns as a list.""" test_examples = [] with open(data_path, 'r', encoding='utf-8') as lines: for line in lines: if line: test_ex = list(line.strip()) test_examples.append(test...
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def darken(color,alpha): """Darkens a color to specified alpha""" return (color[0],color[1],color[2],alpha)
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def run_test_commands(conda_env_file, test_commands): """ Run a list of tests within a conda environment. Args: conda_env_file (str): The name of the conda environment file used to create the conda environment. test_commands (:obj:`list` of :obj:`TestCommand): List of test commands to run. ...
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def interp_star_status(status): """Interprets \*STATUS command output from MAPDL Parameters ---------- status : str Output from MAPDL *STATUS Returns ------- parameters : dict Dictionary of parameters. """ parameters = {} st = status.find("NAME ...
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from typing import Type def _type_to_key(t: Type) -> str: """ Common function for transforming a class type to its associated string key for use in configuration semantics. :param t: Type to get the key for. :return: String key for the input type. """ return f"{t.__module__}.{t.__name__}"
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def find_first(searched, vec): """return the index of the first occurence of item in vec""" for i, item in enumerate(vec): if searched == item: return i return -1
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def cnn_output_length(input_length, filter_size, border_mode, stride, dilation=1): """ Compute the length of the output sequence after 1D convolution along time. Note that this function is in line with the function used in Convolution1D class from Keras. Params: input_length (int): Lengt...
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def __get_data_at_step(file, mtm_dat, var): """ Find the data step that corresponds to an BPM image file and get the corresponding data (key `var`) from an MTM data file. Parameters ---------- file: str The path to a BMP image file. The file name given by the PCS instrument may...
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def _file_size_bytes(*file_paths): """ Total file size for the given paths. :type file_paths: list[Path] :rtype: int """ return sum([p.stat().st_size for p in file_paths])
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def find_pop(db, k, spec_range): """ :param db: list of designs :param k: integer indicating the cut off rank :param spec_range: dictionary indicating the desired specifications :return: pop: dictionary: keywords are the desired specs as well as 'cost'.values are db entries sorted by the key...
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def transformer_class(source): """ Imports the transformer class for a data source """ class_name = source['transformer'] sub_mods = class_name.split(sep=".") module = __import__(".".join(sub_mods[:-1]), fromlist=sub_mods[-1]) class_module = getattr(module, sub_mods[-1]) return class_module
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import math def vector_of_angle(angle): """ Unit vector of an angle in degrees. """ return [[0.0, 0.0], [math.sin(math.radians(angle)), math.cos(math.radians(angle))]]
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def set_srate(srate=44100.0): """Sets the default sampling rate.""" global _srate _srate = srate return _srate
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from typing import Tuple def output_shape_conv_and_pool_layer(rows: int, columns: int, kernel: int, stride: int = 1, padding: int = 0, ...
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from typing import List import json def get_checks_from_appinspect_result(path: str) -> List[str]: """ Returns manual checks from appinspect json result file :param path: path to json result file :return: list of checks in string format """ manual_checks = [] with open(path) as f: ...
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def depth_first_traversal(graph, currentVertex, visited, flag: bool=False) -> list: """Depth first traversal to find all paths from 'start' to 'end' Args: graph (list): adjacency list currentVertex (str): string (key into adjacency list) visited (list): current traversal path fl...
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def speed_for_human(speed): """ Returns a string showing human readable speeds given in Mbps. """ if not speed: return "" elif speed >= 1000000 and speed % 1000000 == 0: return f"{int(speed / 1000000)} Tbps" elif speed >= 1000 and speed % 1000 == 0: return f"{int(speed / ...
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import re def parse_field(line): """ Will match: Number -> (Number, None, None) +Number -> (+Number, None, None) Name -> (None, Name, None) Name (Number) -> (None, Name, Number) Name (+Number) -> (None, Name, +Number) """ p = re.compile(r'^\+?(\d+)$|^(.*?)\s*(?:\(\+?(\d+)\))?$') m = p.match(line) if not m:...
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def tensorshape_to_intlist(tensorshape): """ TensorFlow has its own wrapper for shapes because some could be None. This function turns them into int-lists. None will become a 1. Arguments --------- tensorshape : tf.TensorShape Return ------ output : list list of ints co...
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def try_get_key(frame, key, default_value=-1): """Return `key` in `frame` if it exists; otherwise return `default_value.""" try: return frame[key] except KeyError: return default_value
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def create_set_state_payload(context: str, state: int): """Create and return "setState" dictionary to send to the Plugin Manager. Args: context (str): An opaque value identifying the instance's action you want to modify. state (int): A 0-based integer value representing the state of an action w...
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def make_message(msg_format, coll_id="testcoll", type_id="testtype", **kwargs): """ Combine supplied message format string with keyword parameters to build a message text. """ msg_vals = dict(kwargs, coll_id=coll_id, type_id=type_id) msg_text = msg_format%msg_vals ...
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def get_audio_version(version): """ Get audio version into a human easy readable format. Arguments: :param version: integer :return: string """ return "MPG-%i" %(version)
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import math def weightedMeanStdDev( valueList, weights, scale ): """Compute the weighted mean and standard deviation of a *non-empty* list of numbers.""" numElements = sum(weights) if len(valueList) < 1 or numElements == 0: return(None, 0.0) mean = 0 for i in range(len(valueList)): mean += float(valueList[...
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import torch def construct_length_mask(seq_lengths): """ construct sequence length mask to rule out padding terms. :param seq_lengths: a list or 1D Tensor containing the lengths of the sequences in a batch :return: a 2D Tensor containing the mask """ max_sequence_length = max(seq_lengths) ...
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def does_match_fields(d, field_match): """ Returns if the given dictionary matches the {field_match}. {field_match} may look like: { 'must_be' : 'this', 'and_any_of_' : ['tho', 'se']} """ if not field_match: return True for mk, mv in field_match.iteritems(): # each matches must be fulfilled ...
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def is_unlucky_ticket(ticket: str) -> bool: """ Проверяет, является ли шестизначный номер билета несчастливым. Номер билета является несчастливым, если сумма его цифр делится на 13 без остатка. :param ticket: Шестизначный номер билета. :return: Результат проверки. """ if len(ticket) != 6: ...
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def pressure_error(g, num_pressure, true_pressure): """Computes discrete L2-error norm for the cell-centered pressures""" V = g.cell_volumes error = (V * (true_pressure - num_pressure) ** 2).sum() ** 0.5 / ( V * true_pressure ** 2 ).sum() ** 0.5 return error
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import json def get_all_titles(images_ndjson): """Load a list of all titles from images.ndjson.""" titles = [] with open(images_ndjson) as f: for line in f: row = json.loads(line) title = row.get('title') if title: titles.append(title) return...
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from pydantic import BaseModel # noqa: E0611 import hashlib def hash_model(obj: BaseModel, **kwargs) -> str: """ Creates a deterministic hash of ``obj``, which is some pydantic model. All keyword arguments are forwarded on to :meth:`pydantic.BaseModel.json`. """ digest = hashlib.sha256(obj.json(s...
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def hisat2_index_from_prefix(prefix): """ Given a prefix, return a list of the corresponding hisat2 index files. """ return ['{prefix}.{n}.ht2'.format(prefix=prefix, n=n) for n in range(1, 9)]
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def check_candidates_against_protected(candidates, protected): """ use sets to check whether there is any common membership """ if bool(set(candidates) & set(protected)): return True else: return False
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def ddg ( gxw ): """2nd derivative of the psychometric function""" return gxw*(1-gxw)*(1-2*gxw)
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def create_new_features(clean_df): """ Function to create new features using the cleansed data clean_df (DataFrame) : DataFrame which is used to create new features return (DataFrame) : DataFrame with the derived features """ # Convert gender feature to numbers genders = {"male": 0, ...
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import requests def tplink_post(url: str): """ Issue a POST to the device. The Content-Type header seems to be required by some devices.""" _response = requests.post(url, timeout=5, headers={"Content-Type":"application/x-www-form-urlencoded",}) _response.raise_for_status() return _response
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def calculate_m_metric(flux_a: float, flux_b: float) -> float: """Calculate the m variability metric which is the modulation index between two fluxes. This is proportional to the fractional variability. See Section 5 of Mooley et al. (2016) for details, DOI: 10.3847/0004-637X/818/2/105. Args: f...
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def registery_key_stix_pattern_producer(data): """Convert a Registry Key from TC to a STIX pattern.""" key_name, value_name, value_type = data.get('summary').split(':') parts = [] if key_name.strip(): key_name = key_name.strip().replace('\\', '/') parts.append(f"windows-registry-key:ke...
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import itertools def flatten_dict(**kwargs): """ Flatten a dict of lists into a list of dicts For example flatten_dict(lr=[1, 2], a=[10,3], b=dict(c=[2, 4], d=np.arange(1, 3))) >>> [{'lr': 1, 'a': 10, 'b': {'c': 2, 'd': 1}}, {'lr': 2, 'a': 3, 'b': {'c': 4, 'd': 2}}] """ ks, vs = [], []...
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from typing import OrderedDict def get_unfinished_runs(suite_data): """ Selects only those items from "suite_data" that are not finished yet, so we can wait for their results """ suite_data_unfinished = OrderedDict() for run_id, test_data in suite_data.items(): if not test_data["f...
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def parse_link_body(link_body): """ Given the body of a link, parse it to determine what package and topic ID the link will navigate to as well as what the visual link text should be. This always returns a 3-tuple, though the value of the link text will be None if the parse failed. It's possible fo...
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def smoothbknpo(x, p): """ Smooth broken power law function. Parameters ---------- x: numpy.ndarray non-zero frequencies p: iterable p[0] = normalization frequency p[1] = power law index for f --> zero p[2] = power law index for f --> infinity p[3] = br...
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def convert_time(time): """ This function converts time in a form of integers to a hh:mm:ss format Returns an array | Ex: 01:32:34 """ time_list = [60*60,60,1] output_list = [] for i in time_list: amount, remainder = divmod(time, i) if len(str(amount)) < 2: outpu...
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def drop_axes(array, input_axes, output_axes): """ Drops the dimensions in input_axes that are not in output_axes. Takes the first slice (index 0) of the dropped axes. Arguments: array (ndarray): array to drop input_axes (string): dimension order output_axes (string): dimension ...
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def from_sieve(l: list) -> list: """ Takes a sieve, a sequence of boolean elements whose index is some type of number -- e.g. a prime number -- if it is set to 'True', and returns that list of numbers. """ p=list() for i, val in enumerate(l): if val: p.append(i) return p
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def mkdir(resource, bucket_name, dir_name): """Create directory inside bucket""" client = resource.meta.client if not dir_name.endswith("/"): dir_name = f"{dir_name}/" response = client.put_object(Bucket=bucket_name, Body="", Key=dir_name) return response
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def index(i,j,N): """ Returns the location of {i,j} in the set {{0,1},...,{N-2,N-1}}. """ x=[i,j,N] x.sort() i, j, N = x[0], x[1], x[2] return int(i * (N - 2) - (i * (i - 1)) / 2 - 1 + j)
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def n_o(c_s, n_v): """ Number of outer samples given N_I = 3 as recommended by SNS16. Parameters ---------- c_s : int Total number of model evaluations. n_v : int Number of samples desired for computing total output variance. Returns ------- n_o : float Num...
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from typing import Optional def float_or_none(val) -> Optional[float]: """Convert to float, or leave as None.""" if val is None: return val else: return float(val)
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def to_youtrack_subsystem(trac_component, yt_bundle): """ Converts trac component to YT subsystem. Args: trac_component: Trac component to convert. yt_bundle: YT field bundle to create component in. Returns: YT field, that has same name, owner and description, as trac component...
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def scale_point(point1, scale): """ Scale a point by the given scale """ return (int(round(point1[0] * scale)), int(round(point1[1] * scale)))
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import warnings def warning_record_to_str(warning_message): """Convert a warnings.WarningMessage to a string.""" warn_msg = warning_message.message msg = warnings.formatwarning( warn_msg, warning_message.category, warning_message.filename, warning_message.lineno, wa...
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def const(v): """Create a function that always returns a specific value. * v -- The value the returned function always returns """ def f(a): return v return f
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import torch def unnormalize(normalized_imgs, mean, std): """Unnormalize image for visualization. Args: normalized_imgs (torch.tensor): image with shape (b, 3, h, w) mean (list of floats): list of ImageNet means for 3-channel RGB images std (list of floats): list of ImageNet stand...
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def parse_date_created(dct): """Helper function to parse date-created from profile.""" date = dct['date-created'] if date: return (int(date['@year']), int(date['@month']), int(date['@day'])) else: return (None, None, None)
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def get_invalid_multi_records_sqs_message() -> dict: """ Simulates SQS returning a message with multiple Record entries """ data = { "Records": [ { "messageId": "2e1424d4-f796-459a-8184-9c92662be6da", "receiptHandle": "AQEBzWwaftRI0KuVm4tP+/7q1rGgN...
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def action_emoji(status): """ Get an emoji based on the workflow status. """ if status == 'success': return ':heavy_check_mark:' elif status == 'failure': return ':x:' else: return ':large_orange_diamond:'
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def create_pdf(db_cursor, file_uri) -> int: """Assuming PDF does not already exist in database, create a new PDF instance in database Parameters: db_cursor : the cursor pointing to the database file_uri (str) : the URI assumed to point to the PDF file Returns: int: the ID of the created PD...
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def locate_constraints_of_type(constraints, constraint_type): """ Locates all constraints of a given type out of a list :param constraints: The constraints to filter :type constraints: iterable of\ :py:class:`pacman.model.constraints.AbstractConstraint.AbstractConstraint` :param constra...
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from typing import Sequence from typing import Callable from typing import Any from functools import reduce def compose(functions: Sequence[Callable]) -> Callable: """ Compose a sequence of functions :param functions: sequence of functions :return: combined functions, e.g. [f(x), g(x)] -> g(f(x)) ...
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def rain_sum(p, prev): """ Compute amount (sum) of consecutive rainfall Parameters ---------- p : array rainfall amount in open over previous 24 hours [mm]. prev : array Previous sum of consecutive rain. prev_start = 0.0 Returns ------- array sum of consecutive rainfall [mm] """ if...
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from pathlib import Path import configparser def get_config_value(section, key, path_to_config_file=None): """Returns the value corresponding to the key-value pair in the configuration file (configparser format) By defaults, it is assumed that the configuration file is saved on google drive. If not, pass a p...
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import re def items(s, func=str): """Returns items processed by func in a comma or space delimited string.""" return [func(x) for x in re.split(r"\s*,\s*|\s+", s)]
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def data_loader(e_file, f_file, args): """Load the source and target text file into a list with and also extract lists of unique tokens. Args: e_file (str): path to source (eng) file f_file (str): path to target (foreign) file Returns: tuple: comprising of a list of sentence pa...
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def get_underlined_header(header: str, char: str = '-') -> str: """Underline the header with given char.""" underline = char * len(header) return '\n'.join([header, underline])
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def _null_to_None(data): """ Converts *Javascript* originated *null* and *undefined* strings to `None`. Non-matching data will be passed untouched. Parameters ---------- data : unicode Data to convert. Returns ------- None or unicode Converted data. """ if ...
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def _vec(A): """ Linear operator _vec() from Wiktorsson2001 p478 Args: A: a rank 3 array of shape N x m x n, giving a matrix A[j] for each interval of time j in 0..N-1 Returns: array of shape N x mn x 1, made by stacking the columns of matrix A[j] on top of each other, for each j...
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def get_upgrade_response(connection): """ This function reads from the socket until the HTTP/1.1 end-of-headers sequence (CRLFCRLF) is received. It then checks what the status code of the response is. This is not a substitute for proper HTTP/1.1 parsing, but it's good enough for example purpose...
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def hierarchy_section_header(reversed_heading_tree): """ View helper function to extract the Section Numeral and title for the hierarchy context of the heading and returned as formatted html string :param reversed_heading_tree: :return: html """ section_index = len(reversed_heading_tree) - 1...
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def get_coursename() -> str: """ Acquire course name """ course_name = input("Course name: ") return course_name
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def validate_graph(graph): """ Takes a graph in the form of a dictionary and verifies that for every edge member there exists a source node. If no source node is found from existing edge members, one is created with an empty edge []. :param graph: :return: """ vertices = [vertex for edge in ...
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def transform_strings_to_lists(pd_series): """ Turns values from pd_series from |-delimited strings to lists :param pd_series: :return list of lists: """ values_as_strings = pd_series.dropna().values.astype(str) values_as_lists = [item.split('|') for item in values_as_strings] return val...
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