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import pathlib def get_paths(input_dir, glob_ext='*.*', recursive=False): """Return a list of the paths of all files in the given directory""" if recursive: glob_ext = '**/' + glob_ext data_root = pathlib.Path(input_dir) all_paths = list(data_root.glob(glob_ext)) all_paths = [str(path) for...
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def format_linebreaks(string): """ Replace '\n' linebreaks with '<br />' linebreaks for markdown: Args: string: A string Returns: string: A string with markdown style linebreaks. """ return string.replace("\n", "<br />")
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from copy import deepcopy def clone(obj): """ Clone a database object. :param obj: Original object to be cloned :return: New, saved object. New object is identical to old *except* for id and pk Note that id and pk are often the same but can differ when using abstract models or model inheritance. ...
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def check_if_ancestor_image_is_inherited(image, ancestor): """Helper function that looks for a given ancestor image in the layers of a provided image. It can be used to check, whether an image uses the expected FROM-statement Arguments: image {docker.images.Image} -- Docker image object to be...
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def as_lines(content): """This function splits given ``content`` into lines if it's a string or returns it as is if it's a list. Args: content: String or list of strings. Returns: List of strings. """ if isinstance(content, list): return content return content.split...
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import hashlib def get_file_hash(filepath): """ Returns the MD5 hash of a local file """ file_to_hash = open(filepath, 'rb') md5 = hashlib.md5() while True: current_line = file_to_hash.readline() if not current_line: break md5.update(current_line) return...
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import math def cost_lane_change(vehicle_info, predictions, trajectory): """ Computes cost of changing lanes. Args: vehicle_info: A VehicleInfo tuple. predictions: A dict of predictions for vehicles. trajectory: A Trajectory tuple. Returns: A cost in [0, 1]. """ #...
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import time def retry_delay(deadline, delay, max_delay): """For internal use in retry. Sleep as required and return the new delay or None if retry should time out""" remaining = deadline - time.time() if remaining <= 0: return None time.sleep(min(delay, remaining)) return min(delay*2, ...
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def convertir_ppm(fila, columna): """Conversión de unidad de medición del contaminante de partículas por billón (ppb) a partículas por millón (ppm). Parameters ---------- fila: serie de pandas Una fila de un dataframe de pandas. columna: string (cadena de texto) El nombre de ...
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def valid1(s, c, low, high): """ Returns True or False depending on whether the number of occurences of the character `c` in the string `s` is between the integers `low` and `high` inclusive """ return low <= s.count(c) <= high
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def parse_bool(data): """ Return ``True`` if data is one of:: ``'true', 'True', True``. Otherwise, return ``False``. """ return data in ('true', 'True', True)
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def has_controller(thread): """Check if the current thread has a controller.""" return hasattr(thread,"thread_controller")
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import sqlite3 import logging def setup_db(db_path): """ Initialises a local sqlite3 database and create the table required to hold data. Parameters ------------- db_path string : A filepath to a target sqlite database Returns ------------- con: Connection : Returns ...
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import re def parsePlasClass(filename): """ Parse the file into lists of edge names, lengths, and PlasClass scores """ with open(filename) as f: names = [] lengths = [] scores = [] name = '' for line in f: splt = line.strip().split('\t') ed...
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from typing import Sequence from pathlib import Path def _find_capture_info_json_files() -> Sequence[Path]: """Return a list of all the capture_info.json files.""" root = Path(__file__).absolute().parent.parent capture_info_dir = root / "slamcore_utils" / "share" / "capture_infos" return list(capture_...
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import pymysql.cursors def mysql_conn( host: str = "localhost", port: int = 3306, user: str = "root", db_name: str = "newbook", ): """Establish a PyMySQL connection object Connect to a MySQL Database to be used with a pnguin RemoteFrame Args: host (str): A hostname port (...
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def atoi(text): """ helper for natural_keys attempt to convert text to int, or return text :param text: arbitrary text :return: int if succeeded to convert, the input text as is otherwise """ return int(text) if text.isdigit() else text
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def the_same_repository(repo_1_info, repo_2_info, check_revision=True): """ Given two dicts containing info about repositories, determine if they are the same repository. Each of the dicts must have the following keys: `changeset_revisions`( if check revisions is true), `name`, `owner`, and (either ...
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def create_headers(user_id, token=None): """Return header dict that is needed to talk to the Emby API. :param user_id: Emby user ID :param token: Authentication token for Emby :type user_id: str :type token: str :returns: Headers for requests :rtype: dict """ headers = {} autho...
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def namefromcycle(cyclenumber, version='1.2'): """Return the dataset name corresponding to the given cycle number. SE 1.0 and 1.1 used dashes; SE 1.2 uses zero-padded integers with 10-digit field width. """ if version == '1.2': return 'cycle%010d' % cyclenumber else: return 'c...
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import threading def setInterval(func, sec): """Python setInterval 用法类似于Javascript的setInterval。 :param func: 定期执行的方法。 :param sec: 定时的时间,秒为单位。 """ def func_wrapper(): setInterval(func, sec) func() t = threading.Timer(sec, func_wrapper) t.start() return t
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def prefix_lines(lines, prefix): """Add the prefix to each of the lines. >>> prefix_lines(['foo', 'bar'], ' ') [' foo', ' bar'] >>> prefix_lines('foo\\nbar', ' ') [' foo', ' bar'] :param list or str lines: A string or a list of strings. If a string is passed, the string is split ...
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def _gen_fake_split(separator): """Returns a callable that splits a with the given separator.""" def _split(path): sep_index = path.rfind(separator) if sep_index >= 0: return (path[:sep_index], path[sep_index + 1:]) else: return (path, '') return _split
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def AntelopePf2dict(pf): """ Converts a AntelopePf object to a Python dict. This converts a AntelopePf object to a Python dict by recursively decoding the tbls. :param pf: AntelopePf object to convert. :type md: :class:`~mspasspy.ccore.AntelopePf` :return: Python dict equivalent to md. ...
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import re def replace(text, bindings): """Replace the variables in text with their corresponding bindings. Args: text: The text to replace has variables in the form $<KEY> bindings: A dictionary of binding values keyed by <KEY>. """ regex = re.compile(r'\$(\w+)') return regex.sub(lambda match: bind...
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def correction_byte_table_q() -> dict[int, int]: """Table of the number of correction bytes per block for the correction level Q. Returns: dict[int, int]: Dictionary of the form {version: number of correction bytes} """ table = { 1: 13, 2: 22, 3: 18, 4: 26, 5: 18, 6: 24, 7: ...
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def positive_places(f, xs): """Takes as arguments some function f and a list of numbers xs and returns a list of those-and-only-those elements x of xs for which f(x) is strictly greater than zero. """ ans = [] for x in xs: if f(x) > 0: ans.append(x) return ans
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def make_annotations(df_info) -> str: """Generates a string to be used for annotation the graph. Data is generated from the `describe` function in Pandas, and then parsed from the new dataframe. The annotation string is interpreted as HTML in the Plotly output.""" total_reads = df_info.sum() ds = df...
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def update_line(line): """ Takes a string line representing a single line of code and returns a string with print updated """ # Strip left white space using built-in string method lstrip() new_line = line.lstrip() striped_spaces = len(line)-len(new_line) # If line is print statement, u...
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from typing import List async def hunter(records: List[str], ioc: str) -> bool: """Return if any record in a list of records matches a given IoC. :param records: A list of network records :type records: List[str] :param ioc: An indicator to check against record :type ioc: str :return: If any ...
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def mirror_y(clip, apply_to=["mask"]): """Flips the clip vertically (and its mask too, by default).""" return clip.image_transform(lambda img: img[::-1], apply_to=apply_to)
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def replace_wildcard(input_list): """Method to replace a wildcard `-` in the input values. This method will replace the wildcard `-` in the input list; the returned two lists have different values on the position of `-`. Example: ['0', '-', '1'] => (['0', '0', '1'], ['0', '1', '1']) Parameters ...
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import math def _quaternion_length(quat): """Calculate the length of a quaternion :param quat: Blender quaternion object :rtype: float """ return math.sqrt(quat.x * quat.x + quat.y * quat.y + quat.z * quat.z + quat.w * quat.w)
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def load_jobs(db, experiment_name): """load the jobs from the database Returns ------- jobs : list a list of jobs or an empty list """ jobs = db.load(experiment_name, 'jobs') if jobs is None: jobs = [] if isinstance(jobs, dict): jobs = [jobs] return job...
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def _get_bit(x: int, i: int) -> bool: """Returns true iff the i'th bit of x is set to 1.""" return (x >> i) & 1 != 0
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def _shell_quote(s): """Copy of bazel-skylib's shell.quote. Quotes the given string for use in a shell command. This function quotes the given string (in case it contains spaces or other shell metacharacters.) Args: s: The string to quote. Returns: A quoted version of the string t...
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def magnitude(row): """ Calculates the magnitude of the body's acceleration vector in the row. """ return (row[21] ** 2 + row[22] ** 2 + row[23] ** 2) ** 0.5
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def n_colors(lowcolor, highcolor, n_colors): """ Splits a low and high color into a list of n_colors colors in it Accepts two color tuples and returns a list of n_colors colors which form the intermediate colors between lowcolor and highcolor from linearly interpolating through RGB space """ ...
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def getSectionData(config, section): """Generates a map of key-values for a given section of an INI""" dict1 = {} options = config.options(section) for option in options: try: dict1[option] = config.get(section, option) except: print("exception on %s!" % option) ...
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def evaluate_ops(prim_len: int, sec_len: int, sparse_rounds: int = -1) -> float: """ Evaluates the number of total node pair flow computations needed to calculate the complete flow in the sample according to the general_flow policy. :param prim_len: length of the primary set :param...
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def database_info(connection): """ Parse an SQL string of the format: database_type://user:password@address:/database mysql://dbadmin:password@10.0.0.1/nova """ db = {} conn = connection.partition(':') if conn[1] != ':': return None db['type'] = conn[0] conn = con...
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def read_xvg_col(xvg_file, col): """Read 1 column of xvg file and return as array column is 0-indexed""" with open(xvg_file, 'r') as fp: lines = [line.strip() for line in fp.read().split('\n')] data = [] for line in lines: if not line.startswith(('#', '@')) and line != '': ...
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def parityOf( n ): """ parityOf - determine if the number of bits is odd or even Args: n: the number to be tested. Returns: o - if the number has even bits. 1 - if the number has odd bits. """ parity = 0 while( n ): parity ^= (n&1) n >>= 1 return ...
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def mul_by_two_or_min_one(n): """Simple timeout calculation: multiple the max response time by 2 or at least a minimum of 1 second.""" return max(n * 2, 1)
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def friendly_since(time_type, since): """ Takes a since and, if it is Run-based expressed as Lumi-based, returns the run number. Otherwise, returns the since without transformations. """ if time_type == "Run" and (since & 0xffffff) == 0: return since >> 32 else: return since
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def _KITTIObjectHas3DInfo(obj): """Check whether KITTI object has valid 3D bounding box information.""" height, width, length = obj['dimensions'] # KITTI raw data has -1 for all 3 dimensions when no 3D box info is present. return not (width == -1 or length == -1 or height == -1)
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import itertools def pairwise(iterable): """Iterate over the given iterable in pairs. pairwise([1, 2, 3, 4]) -> (1, 2), (2, 3), (3, 4) """ a, b = itertools.tee(iterable) # Advance b one step next(b, None) return zip(a, b)
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def rm_newline_hyphenation(dfcol): """ Remove hyphens at the end of lines (continuation character) and merge the text """ return dfcol.str.replace('([a-z])(-\s*\n\s*)([a-z])', r'\1\3', regex=True)
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def mean(seq): """Return the average of the elements of a sequence.""" return float(sum(seq))/len(seq) if len(seq) > 0 else float('nan')
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def is_the_only_string_within_a_tag(s): """Return True if this string is the only child of its parent tag.""" return (s == s.parent.string)
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import typing def create_molecular_formula(atoms: typing.List[str]) -> str: """ Creates a molecular formula out of a list of moleules: Parameters ---------- atoms : List[str] A list of atoms. Example: ['H', 'O', 'H'] Returns ---------- A molecular formula. Example: 'H2O' """ dictionary = {} for atom ...
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import uuid def gen_token(max_length=5): """ Generate a random token. """ return uuid.uuid4().hex[:max_length]
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def get_trader_scada_ramp_rate(trader_id, ramp_rates): """ Extract SCADA ramp rate for a given trader. If the SCADA ramp rate is 0 or missing return None. """ if (trader_id in ramp_rates.keys()) and (ramp_rates[trader_id] > 0): return ramp_rates[trader_id] else: return None
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def pred_diff(y_pred, y): """ Returns the difference between the test target and the predicted one, for a future mse calculation. :param y_pred: the vector of predictions :param y: the target :return: the vector difference between y and y_pred """ return y - y_pred
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def norm3_sqr(x, y, z): """ Squared 2-norm for 3d vectors :param x: :param y: :param z: :return: """ return (x * x) + (y * y) + (z * z)
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import re def process_text(transcript:str, remove_apost:bool = False)->str: """This function removes punctuation (except apostrophe's) and extra space from the input `transcript` string and lowers the case. Args: transcript (str): input string to be processed remove_apost (bool): if True...
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def sort_key(item): """Returns a string to sort by for a run. Meant to be the key function in sorted() :param item: Run instance :type item: cloud_snitch.runs.Run :returns: String to sort by :rtype: str """ return '{}~{}~{}'.format( item.environment_account_number, item...
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def are_all_strings_in_text(text, list_of_strings): """ :param text: output from convert_pdf_to_text :type text: list of str :param list_of_strings: a list of strings used to identify document type :type list_of_strings: list of str :return: Will return true if every string in list_of_strings is...
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import random def generate_random_sequence(length, prob_dist=[0.25, 0.25, 0.25, 0.25]): """ generates a DNA sequence given length according to the given nucleotide distribution """ seq = '' for p in range(length): n = random.random() if n < prob_dist[0]: seq += 'A' elif n < sum(prob_dist[0:2]): seq += 'C' ...
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def pid_filename(component: str) -> str: """Obtain the canonical pid filename for the specified component name.""" return f".lta-{component}-pid"
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def str_to_int_list(string): """ :param str string: A string read by the config file. :return: A list of integers. :rtype: list Utility function used to convert a string to a list of integers """ list = [] parts = string.split(',') for part in parts: part = part.replac...
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def run_test(f): """Prints the test name and runs the test.""" print(f.__name__) f() return f
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def get_hostgroup_type(code): """Get hostgroup type from code.""" hostgroup_type = {0: "Not internal", 1: "Internal"} if code in hostgroup_type: return hostgroup_type[code] + " (" + str(code) + ")" return "Unknown ({})".format(str(code))
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def add_nulls_to_vals(columns, vals): """Takes a list of columns to be inserted/updated and a value dictionary. Any columns that are not present in the dictionary keys will be added with a None value, translating to Null in the db. Used to help input dictionarys Args: columns (list of str): co...
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def stop(ctx): """Stop robot Args: ctx: Context Returns: Success: 0 Failure: False """ r = ctx.tran.post("/v2/movementservice/robot/movement/stop") if r[0] != 200: return False return r[1]
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def get_square(array, size, y, x, position=False): """ Returns an square subframe. Parameters ---------- array : array_like Input frame. size : int, odd Size of the subframe. y, x : int Coordinates of the center of the subframe. position : {Fals...
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def _extract_args(cmd_line, args): """ Extract specified arguments and sorts them. Also removes them from the command line. :param cmd_line: Array of command line arguments. :param args: List of arguments to extract. :returns: A tuple. The first element is a list of key, value tuples represent...
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def add_to_list(list_name, list_to_add, content, begin_index): """ Add a new element to a list. :param list_name: The name of the list. :param list_to_add: The list to add the element to. :param content: The input message. :param begin_index: The beginning index of the entry in the list. :re...
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def pause_flc_policy_on_volume(session, lc_policy_id, volume_id, return_type=None, **kwargs): """ Pause a file lifecycle policy for a given volume. :type session: zadarapy.session.Session :param session: A valid zadarapy.session.Session object. Required. :type lc_po...
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import re def filter_osd_trace_timestamps(in_str_list): """ Remove all timestamps from the OSD-recorded systrace and coretrace log files """ filter_expr = re.compile(r'^[0-9a-f]+ ', flags=re.MULTILINE) return [filter_expr.sub(repl='', string=l) for l in in_str_list]
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import math def rounded_bez(angle): """ From https://math.stackexchange.com/questions/1671588/b%C3%A9zier-curve-approximation-of-a-circular-arc. The control points of a cubic Bezier curve for approximating a circular arc with end points P0, P1, radius R, and angular span A: ...
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import torch def rand_bbox_minmax(img_shape, minmax, count=1): """Min-Max CutMix bounding-box Inspired by Darknet cutmix impl, generates a random rectangular bbox based on min/max percent values applied to each dimension of the input image. Typical defaults for minmax are usually in the .2-.3 for mi...
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def validate_coin_selection(selection): """Validation function that checks if 'selection' arugment is an int 1-5""" switcher = { 1: (True, "Quarter"), 2: (True, "Dime"), 3: (True, "Nickel"), 4: (True, "Penny"), 5: (True, "Done") } return switcher.get(selection, (F...
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def get_IP_address(request): """ Returns the visitor's IP address as a string given the Django ``request``. """ # Catchs the case when the user is on a proxy ip = request.META.get('HTTP_X_FORWARDED_FOR', '') if ip == '' or ip.lower() in ('unkown', ): ip = request.META.get('REMOTE_ADDR', ...
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import hashlib import json def dict_to_sha256(dictionary): """ Get sha256 hexdigest from a dictionary :param dictionary: dict :return: hexdigest """ sh = hashlib.sha256(json.dumps(dictionary).encode("utf-8")) digest = sh.hexdigest() return digest
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from typing import List from typing import Tuple def get_index_tuple_from_kraus_matrices_indices( index: int, indices: List[int] ) -> Tuple[int, int]: """Get index i, j of Instrument object from a list of numbers corresponding to matrices of Kraus operators. Parameters ---------- index: int ...
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def join_paths(path, suffix): """Joins a path and a suffix into a single path. Resolves leading and trailing '/'. The suffix can be null. Examples: join_paths('abc/def/', '/hij') => 'abc/def/hij' join_paths('a', 'b/c/d') => 'a/b/c/d' join_paths('abc/def', None) => 'abc/def' """ if not path.endswi...
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def compare(args, func): """ Check if all the numbers in the list satisfy the constraint Args: args(list): a list of numbers to be checked func(function): the constraint function Return(Boolean): True/False represents if the list satisfies the constraint """ for i ...
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def convert_tree_to_string(ne_tree): """Converts a tree into a string""" return " ".join([w[0] for w in ne_tree])
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def decode(line: str) -> list: """Generate binary list from string.""" decoded = [] for char in line: if char == ".": decoded.append(0) else: # means char == "#" decoded.append(1) return decoded
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def lower_text(sentences): """Given a list of sentences, return the sentences where each character is converted to lowercase.""" return [sentence.lower() for sentence in sentences]
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from pathlib import Path def _resolve_code(code_or_file, _load=lambda f: Path(f).read_text()): """If `code_or_file` is a filename then load it, otherwise return it as-is.""" if type(code_or_file) is str and ("\n" in code_or_file or len(code_or_file) > 256): # Probably code return code_or_file ...
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import json def json_esc(data: object, indent: int=2) -> str: """JSON encode data with indent""" return json.dumps(data, indent=indent).replace("</", "<\\/")
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def error_app(msg): """ A trivial WSGI app that always displays a 500 error with a given message Parameters: :msg: The message to display in the response body with the 500 error """ def _app(_, start_response): response_body = msg status = '500 Error' response_headers =...
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import time def string_to_date(datestring): """Takes a date string, runs time.strptime on it, and returns the result. .. Note:: This doesn't do time zone translations. :param datestring: the string to convert. e.g. "07/09/2011 04:54 pm" :returns: struct_time """ return time.str...
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from typing import Any import math def is_integer(value: Any) -> bool: """ Returns True if the input consists soley of digits and represents an integer rather than character data or a float. '3' is True '-3' is True 3 is True -3 is True 3.3...
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def _extract_user_from_email(raw_username): """ Usernames come from the globus provider in the form: username@login_authority.com """ if not raw_username: return None return raw_username.split('@')[0]
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def local_rig_path(msg): """Gets local path of the rig. Args: msg (dict[str, str]): Message received from RabbitMQ publisher. Returns: str: Path to local rig. """ return msg["rig"]
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import hashlib def hash_stream(fileobj, hasher=None, blocksize=65536): """Read from fileobj stream, return hash of its contents. Args: fileobj: File-like object with read() hasher: Hash object such as hashlib.sha1(). Defaults to sha1. blocksize: Read from fileobj this many bytes at a time. ...
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from datetime import datetime def to_day_of_week_int(dt: datetime) -> int: """ Get day of week of a date. Monday == 0...Sunday == 6. Parameters ---------- dt : datetime Represents a datetime in datetime format. Returns ------- int Represents day of week. """ ...
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import six import re def validate_phone(phone, required=False): """Validates the specified phone number. Phone number vlidation is very lax here. Backend will enforce E.164 spec compliance, and normalize accordingly. Here we check if the number starts with + sign, and contains at least one alphanumer...
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def multi_dimensional_fitness(individual): """A simple two-dimensional fitness function.""" return pow(individual[0], 2) + pow(individual[1], 3)
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import json from typing import OrderedDict def load_plan(filepath): """Load a JSON transfer learning plan. The named JSON tranfer learning plan file is loaded in a manner that preserves the entry order imposed when the plan was created. This allows the root entry to be easily located regardless of th...
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def tamper(payload, **kwargs): """ Append a HTTP header 'X-originating-IP' to bypass WAF Protection of Varnish Firewall Notes: Reference: http://h30499.www3.hp.com/t5/Fortify-Application-Security/Bypassing-web-application-firewalls-using-HTTP-headers/ba-p/6418366 Examples: >> X...
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def title(file): """Title of the file.""" return file.name
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def get_comma_sep_string_from_list(items): """Turns a list of items into a comma-separated string. Args: items: list. List of the items. Returns: str. String containing the items in the list separated by commas. """ if not items: return '' if len(items) == 1: ...
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def template_widget(widget, template_engine, kwargs=None): """ Return a widget instance using the specified template engine. """ if kwargs is None: kwargs = {} if 'template_engine' in kwargs: return kwargs kwargs['template_engine'] = template_engine return widget(**kwargs)
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def angle_to_pwm(angle, servo_params, axis_index, leg_index): """Converts a desired servo angle into the corresponding PWM command Parameters ---------- angle : float Desired servo angle, relative to the vertical (z) axis servo_params : ServoParams ServoParams object axis_index ...
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import socket def _ip_to_as_sender(request: str) -> str: """ helper function for ``ip_to_as_info`` this sends ``request`` to the server and returns the response :param request: a request string for whois :return: the answer formatted cleanly. 1 line per IP """ sock = socket.socket(socket.AF_...
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def problem_4_5(tree): """ Write an algorithm to find the ‘next’ node (i.e., in-order successor) of a given node in a binary search tree where each node has a link to its parent. Solution: There are two cases: 1. the node has a right subtree, in which case his immediate successor is the smalles...
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