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from typing import List from typing import Set def find_circle_num(M: List[List[int]]) -> int: """ :param M: :return: >>> find_circle_num([[1,1,0], [1,1,0], [0,0,1]]) 2 >>> find_circle_num([[1,0,0,1],[0,1,1,0],[0,1,1,1],[1,0,1,1]]) 1 """ def dfs(row: int) -> None: marked.a...
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import glob def get_num_files(start_year, end_year, perf_dir): """ Get number of files to read given start_year end_year and path to performance files """ count = 0 for year in range(start_year, end_year + 1): count += len(glob.glob(perf_dir + f"/*{year}*")) return count
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def _CountChar(line, opening_char, closing_char): """Count (number of opening_char) - (number of closing_char) in |line|. Used to check for the end of JSON parameters. Ignores characters inside of non-escaped quotes. Args: line: line to count characters in opening_char: "+1" character, { or [ clos...
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def write_user_config(): """Creates a callable that writes a mock .nbreport.yaml file into the current working directory. Used as a pytest fixture. """ def _write_user_config(path='.nbreport.yaml'): data = ( 'github:\n' ' username: testuser\n' ' token: mytok...
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def extractSpikesInWindow(window, samples, spikes, sampleRate=20000): """ Inputs: window = sequence, len 2; start and stop of window in s samples = sequence; list of samples at which spikes are detected for each sweep spikes = sequence; list of spike IDs corresponding to samples in goodsamples_sweep...
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import os def get_api_url(): """Get current API URL from environment""" return os.getenv("DYM_API_URL", "https://api.dymaxionlabs.com")
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from typing import List import re def find_indexes(haystack: List[str], regex: str) -> List[int]: """ Find indexes in a list where a regular expression matches. Parameters ---------- haystack List of strings. regex Regular expression to match. Returns ------- ...
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def optimize(gan, ddgan): """ Create optimizer Args: gan (GAN): The GAN to optimize ddgan (Module): The ddgan module Returns: Optimizer: The optimizer """ kwargs_opt = { "start_from": 0, "nPOD": 10, "nLatent": 100, "npredictions": 2, ...
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import os def override_environment(**kwargs): """Returns a copy of the current environment, with variables overridden as specified in the arguments. Each key represents a variable name and each value must be a string (to set the specified key to that value) or None (to unset the specified key). ""...
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def _batch_updates(updates): """Takes a list of updates of form [(token, row)] and sets the token to None for all rows where the next row has the same token. This is used to implement batching. For example: [(1, _), (1, _), (2, _), (3, _), (3, _)] becomes: [(None, _), (1, _), (2,...
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def fixed2Float(value): """The fixed2Float method translates a fixed 1/64 pixel-unit value to float.""" return float(value) / 64
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def vectorize_edge(edge, lemma_index, pos_index, dep_index, dir_index): """ Return a vector representation of the edge: concatenate lemma/pos/dep and add direction symbols :param edge: the string representation of an edge :param lemma_index: index to lemma dictionary :param pos_index: index to POS d...
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def update(ntuple, **kwargs): """Update named tuple.""" return dict(ntuple._asdict(), **kwargs)
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import torch def get_best_non_unk_predictions(logits: torch.Tensor, unk_id): """ For every sample, returns the prediction with the highest score. If this is the <unk> token, then the prediction with the second highest score will be returned instead :param logits: batch_size x num_predict x num_subtoke...
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def phi2 (n, p=2): """ Euler phi function. Second version. We use the fact that phi has a formula in terms of the prime decomposition of n. We assume n is a positive integer. The default initial value for prime p is 2. Thus calls such as phi2 (52961) will succeed, though given n is odd we could...
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from pathlib import Path from typing import Optional def normalize_path(path: Path, root: Path) -> Optional[str]: """Normalize `path`. May return `None` if `path` was ignored.""" try: abspath = path if path.is_absolute() else Path.cwd() / path normalized_path = abspath.resolve().relative_to(ro...
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def tf(words) -> float: """Boolean term frequency, weighted over the document's word count.""" return 1/len(words)
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from typing import List def knapsack_no_value(target: int, objects: List[int], cur: int) -> bool: """ we should assume objects are in heavy to light order :param target: the target weight, or the capacity of the knapsack :param objects: all available weights for items :param cur: current index in...
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def nested_getattr(obj, attr): """getattr implementation supporting nested attributes.""" attributes = attr.split('.') for i in attributes: if obj is None: break try: obj = getattr(obj, i) except AttributeError: raise return obj
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def _bind_awaitable(function): """ Composes a container a regular ``async`` function. This function should return plain, non-container value. In other words, it modifies the function's signature from: ``a -> Awaitable[b]`` to: ``Container[a] -> Container[b]`` .. code:: python >>>...
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import logging import subprocess def check_call(commandline, *aargs, **dargs): """Wrapper around subprocess.check_call that logs the command.""" logging.info(" ".join(commandline)) return subprocess.check_call(commandline, *aargs, **dargs)
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def f(x, y=lambda x: x + 1, z=lambda y: y ** 2): """test function""" return x, y, z
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def ndependents(dependencies, dependents): """ Number of total data elements that depend on key For each key we return the number of data that can only be run after this key is run. The root nodes have value 1 while deep child nodes will have larger values. Examples -------- >>> dsk = {'...
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def fix_space_issue(encodings, tokenizer): """ Fix space issue by XLM-R tokenizer which will tokenize some punc/word to two tokens with the same offset_mapping: (0, 1) """ input_ids = encodings.input_ids offset_mappings = encodings.offset_mapping num_sents = len(input_ids) for i in ran...
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import os def get_root_dir(rootdir=None, verbose=True): """get a rootdir (a default one, or validate the one given etc.)""" if rootdir is not None: return rootdir else: rootdir = os.path.join(os.path.expanduser('~'), 'tmp', 'qchack') if not rootdir.startswith(os.path.sep): ...
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def unique_values_from_query(query_result): """Simplify Athena query results into a set of values. Useful for listing tables, partitions, databases, enable_metrics Args: query_result (dict): The result of run_athena_query Returns: set: Unique values from the query result """ r...
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import argparse def get_args(): """Parses command line arguments""" parser = argparse.ArgumentParser() parser.add_argument( '-c', '--config', help='Python path to DAG config. config dict expected to be named DAG_CONFIG.', default='sentiment_classifier.config.default_config' ) ...
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def get_host_uptime(): # pragma: no cover """Returns host uptime in minutes.""" with open('/proc/uptime') as f: uptime = float(f.readline().split()[0]) return uptime / 60
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def create_dockerfile(ctx): """ Creates a Dockerfile for this project. """ return ctx.obj['docker'].create_dockerfile( project=ctx.obj['project_name'] )
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def level(resp): """ Args: resp: level: string Returns: [level 1: 배송준비중, 2: 집화완료, 3: 배송중, 4: 지점 도착, 5: 배송출발, 6:배송 완료] """ if resp['level'] == 1: return { "code": 1, "level": "배송 준비중" } elif resp['level'] == 2: return { "code": 2, "level": "집화 완료" } elif resp['level'] == 3: retur...
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def find_name_from_len(lmin, lens): """ reverse lookup, get name from dict >>> lens = {'chr1': 4, 'chr2': 5, 'chr3': 4} >>> find_name_from_len(5, lens) 'chr2' """ for fname, l in lens.iteritems(): if l == lmin: return fname raise Exception('name not found')
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def bits_to_byte(bits): """ Return int represented by bits, padded on right. @param str bits: a string representation of some bits @rtype: int >>> bits_to_byte("00000101") 5 >>> bits_to_byte("101") == 0b10100000 True """ return sum([int(bits[pos]) << (7 - pos) for p...
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def play_media(lc): """ From play media block """ if lc.gplay is None: return False if lc.gplay.player is not None: lc.gplay.player.play()
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from typing import Dict import collections def count_char_ngrams(s: str, n: int, pad_char: str = "$") -> Dict[str, int]: """Count all character n-grams in s. Args: s: String to analyze n: The desired length of the n-grams. E.g. `3` to get 3-grams like `"abc"`, `"def"` pad_char: Paddin...
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def is_fallback(x, y): """Fallback to x is y.""" return x is y
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def remove_background(df): """ Helper function removing background flows from a given dataframe :param df: the dataframe :return: the no-background dataframe """ df = df[df['label'] != 'Background'] return df
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def optimal_tilt(lat): """ Returns an optimal tilt angle for the given ``lat``, assuming that the panel is facing towards the equator, using a simple method from [1]. This method only works for latitudes between 0 and 50. For higher latitudes, a static 40 degree angle is returned. These result...
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def for_language(cell, languages=set()): """Check if a given paragraph is in an expected language""" return cell.get("_lang") in languages
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import torch def setDevice(cuda = True): """ :param cuda: True if gpu usage is :return torch device (cpu or cuda) """ device = torch.device("cuda" if (torch.cuda.is_available() and cuda) else "cpu") torch.set_default_tensor_type("torch.FloatTensor") if device.type == "cuda": torch...
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def boltHeadFinder(head): """ """ _head = str(head).lower() _head = _head.replace('bolt','') _head = _head.replace('screw','') _head = _head.replace('head','') _head = _head.replace(' ','') _head = _head.replace('_','') _head = _head.replace('-','') _head = _head.strip() ...
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def to_binary(x): """Convert a binary field to 1's and 0's""" if x == None: return 0 else: return 1
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def gamma_poisson(): """ Return Stan model code for a Gamma-Poisson Bayesian model. The model takes as inputs two sequences of count variables, with each entry representing the total number of target events that occur over a standardized time interval. Must provide hyperparameters `alpha_` and `beta...
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from typing import Sequence def bernstein3_d1(t: float) -> Sequence[float]: """ First derivative of Bernstein polynom of 3rd degree. """ t2 = t * t a = -3.0 * (1.0 - t) ** 2 b = 3.0 * (1.0 - 4.0 * t + 3.0 * t2) c = 3.0 * t * (2.0 - 3.0 * t) d = 3.0 * t2 return a, b, c, d
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def combinePeople(nestedlist1, nestedlist2): """Combines all people (dictionaries) from two lists, merging data along the way For example, if a person is found once in both given lists, the cards they own and need will be combined into one person object and included in the result :param List[List[Dict[str,...
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def flatten_tree(root): """ get a flattened tree of the "paths" of all children of a tree of objects. used in sidenav """ ret = [] if root["path"]: ret.append(root["path"]) for child in root["children"]: ret = ret + flatten_tree(child) return ret
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from typing import List import re def parse_tag_list(message: str, tag: str, allowed_chars: str) -> List[str]: """Parses a comma separated list following a tag. Example: The function call parse_tag_list('abc IMPORTS=foo,bar abc', 'IMPORTS', 'a-z') returns ['foo', 'bar']. Args...
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def upload_dup_file(rest_obj, module): """Upload DUP file to OME and get a file token.""" upload_uri = "UpdateService/Actions/UpdateService.UploadFile" headers = {"Content-Type": "application/octet-stream", "Accept": "application/octet-stream"} upload_success, token = False, None dup_...
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def rename_uuid_columns(data): """Renames any columns called or containing `uuid`, to the convention of `id`. Args: data (:obj:`pandas.Dataframe`): dataframe with column names to amend Returns: (:obj:`pandas.Dataframe`): the original dataframe with amended column names """ renames ...
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import re def getCpuInfo(field): """Read a given field from /proc/cpuinfo Returns the first line which has the relevant fieldname Opens and reads the file once for each enquiry, but this is mostly for headers and so on, so it's probably not worth worrying about! """ # Unfortunately /proc/cpuin...
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def _remove_none(**kwargs): """Drop optional (None) arguments.""" return {k: v for k, v in kwargs.items() if v is not None}
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import random def get_random_yes_no_question(): """Return exit question for YES/NO answering.""" # type: () -> str questions = [ "Would you like to get another Song Match with a different artist?", "Can I help you get a Song Match for a different artist?", "Do you want to try it fo...
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def get_straights(edge): """ Get vectors representing straight edges """ return [v for v in edge if v[0] == 0 or v[1] == 0]
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import hashlib def get_hash(params_dict): """ Get a unique has for the given dictionary params_dict a python dictionary TO DO: Add sort for hash """ txt = str(params_dict).encode() return hashlib.sha1(txt).hexdigest()
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import os def get_project_dir(dir_arg): """Define project directory.""" if dir_arg is None: return os.path.abspath(os.getcwd()) os.mkdir(dir_arg) if not os.path.isdir(dir_arg) else None return os.path.abspath(dir_arg)
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import re def get_list_of_object(seq, is_sort=True): """ return a sorted list of all data object in the seq (but why sort?) """ # regexp to match all type of objects exist in sequence regex = re.compile(r'obj\b(?:(?!endobj).)*\bendobj', flags=re.DOTALL) # match is now a list contains all object in a s...
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def clean_img_attributes(page): """ Remove image alt and data-mathml attributes because they confuse html2text. """ imgs = page.find_all('img') for img in imgs: img['alt'] = '' img['data-mathml'] = '' return page
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import time def compute_timeout_value( timeout, timeout_date ): """ Computes and returns a timeout in seconds. The timeout is adjusted to be a minimum of 0.01 seconds. """ assert timeout != None or timeout_date != None if timeout != None: rtn = float(timeout) if timeout_date ...
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def filter(trajectory_list, filter_str): """ Evaluate filter_str on all elements (traj) of the trajectory_list and returned the filtered list. Return a deepcopy of the elements. Change to a reference instead of copy for performance optimisation. It is better to use list comprehension directly ex. : filt...
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import math def cal_line_length(point1, point2): """Calculate the length of line. Args: point1 (List): [x,y] point2 (List): [x,y] Returns: length (float) """ return math.sqrt( math.pow(point1[0] - point2[0], 2) + math.pow(point1[1] - point2[1], 2))
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import textwrap def reindent(text, indentation): """Return reindented text that matches indentation.""" if '\t' not in indentation: text = text.expandtabs() text = textwrap.dedent(text) return '\n'.join( [(indentation + line).rstrip() for line in text.splitlines()]).rstrip()...
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from datetime import datetime def as_date(value): """Converte uma sequência string para um objeto :class:`datetime.date`. Os espaços em branco das bordas da sequência serão removidos antes da conversão. :param str value: String contendo uma data ANSI (``yyyymmdd``) :rtype: datetime.date """ ...
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import yaml def load_yaml_config(yaml_path): """Helper function to load a yaml config file""" with open(yaml_path, "r") as stream: try: return yaml.safe_load(stream) except yaml.YAMLError as exc: raise ValueError("Yaml error - check yaml file")
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def extended_euclidean_algorithm(a: int, b: int) -> tuple[int, int]: """ Extended Euclidean Algorithm. Finds 2 numbers a and b such that it satisfies the equation am + bn = gcd(m, n) (a.k.a Bezout's Identity) >>> extended_euclidean_algorithm(1, 24) (1, 0) >>> extended_euclidean_algorithm(...
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import json def load_from_json(file_path): """ Loading data from a json file. Input: file_path: (the source file) Output: data: the loaded data """ # catching possible pathlib.Path object if isinstance(file_path, str) is False: file_path = str(file_path) # c...
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from datetime import datetime def ip_str_2(sci): """String interpolation using format_map() & vars() | Also see format().""" data = '%s is %d years old' % (sci.name, (datetime.now().year - sci.born)) return data
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def get_mean_value(predicted_values): """ Method for calculate mean prediction value by all predicted value :param predicted_values: all predicted values :type predicted_values: list :return: mean prediction value :rtype: float """ if len(predicted_values) == 0: return None ...
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import random import math def check_gcd(): """ Generates two random integers and finds the greatest common divisor of generated integers. :return: gcd and integers """ number_1 = random.randint(1, 100) number_2 = random.randint(1, 100) expression = f"{number_1} {number_2}" answer =...
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def crop_center(img, crop_x, crop_y): """ Crops image from center to new size Args: img: input image width: width of cropped image height: height of cropped image Returns: Cropped image """ height, width = img.shape startx = width // 2 - (crop_y // 2) st...
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import json def load_learner_id(json_path): """Saves dict of floats in json file Args: d: (dict) of float-castable values (np.float, int, float, etc.) json_path: (string) path to json file """ with open(json_path, 'r') as f: # We need to convert the values to float for json (i...
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from typing import Any def _dump_ast_or_value(value: Any, python=True, indent: int = 0) -> str: """ Helper function to dump the AST node type or a reconstructible node value. :param python: Use Python syntax for output. """ if python and hasattr(value, 'dump_ast'): return value.dum...
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import uuid def generate_id() -> str: """ Create a unique ID. This is passed in each message, and used to match requests to responses. """ return uuid.uuid4().hex
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def _calc_time_table_from_events(event_list): """Calculate the time table from list of events.""" time_table = [] start_time = event_list[0].start_time if start_time is None: print('The first ACL event is not finished!') start_time = 0.0 for event in event_list: name = event.name if event.fini...
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def xstr(s): """return empty string if input is none/false""" return '' if not s else s
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def get_column(wks, row, col, number): """Get column with starting row and column, and then going down `number` rows.""" return list(map(lambda x: x.value, wks.range(row, col, number+row-1, col)))
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def is_valid_name(s): """ Validate name strings """ INVALID_CHARS = '~`!$%^&*{}+=?/\\.,:;><|\'\"' for char in INVALID_CHARS: if char in s: return False return True
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import tempfile import os def create_temp_logfile(name): """ This function uses tempfile.mkstemp to create a temporary log filename in the /tmp directory """ try: tmp_file = tempfile.mkstemp(prefix="%s-" % (name), suffix=".log", dir="/tmp") except Exception: return None # ...
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def not_empty(x): """Check if a collection is not empty or object is not None""" if hasattr(x, '__len__'): return len(x) > 0 return x is not None
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import time def get_object_paths(s3, bucket, prefix): """List objects in S3 bucket with given prefix. Uses paginator to ensure a complete list of object paths is returned. """ # r1 = s3.list_objects(Bucket=DEND_BUCKET, Prefix=prefix) # r2 = list(map(lambda obj: obj['Key'], r1['Contents'])) # r...
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import sys def remove_empty_genotypes(line, start1, end1, start2, end2, start3, end3): """For variants found by only one caller, remove empty (.:.:.) fields. If only DeepVariant has call, set dv_priority_GT to the DV GT Set all consensus GT to ./. """ line[8] = line[8] + ":concensus_GT:dv_pr...
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def evaluate_cv_total_accuracy(val_beauty_acc, val_fashion_acc, val_mobile_acc, kaggle_public_acc=None): """Utility function to evaluate results, pass kaggle_public_acc=False to evaluate local CV score""" if kaggle_public_acc: total_examples = 57317 + 43941 + 32065 + 172402*0.3 num_correct = 573...
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import json def read_json(json_path): """Read json file.""" with open(json_path, "r") as f: meta = json.load(f) return meta
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def plot_deviations(): """Plot deviations in results for a group of samples.""" return NotImplementedError
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def keymap(fn, d): """ Apply function to keys of dictionary >>> bills = {"Alice": [20, 15, 30], "Bob": [10, 35]} >>> keymap(str.lower, bills) # doctest: +SKIP {'alice': [20, 15, 30], 'bob': [10, 35]} See Also: valmap """ return dict(zip(map(fn, d.keys()), d.values()))
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from typing import Callable from typing import Optional from typing import Tuple import multiprocessing def start_process( target: Callable, args: Optional[Tuple] = None ) -> multiprocessing.Process: """Start a process from with the multiprocessing framework. Parameters ---------- target: callabl...
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import hashlib def sha256(_input: str): """ Creates a sha256 hash from the input Args: _input (str): A string Returns: A sha256 hash string """ m = hashlib.sha256() m.update(_input.encode("UTF-8")) return m.hexdigest()
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def find_cfg(config, name): """ (Ze'ev) reaaaaallly cryptic function which returns the config object for specified group. """ cfg = None for k, v in config.items(): try: if k.lower() == name.lower(): cfg = v return cfg else: ...
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import json def build_search_body(event): """Extract owners and filters from event.""" owners = json.loads(event["Owners"]) filters = json.loads(event["Filters"]) return {"Owners": owners, "Filters": filters}
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def mergeSegments(lSegment, iMin): """Take as input a list of interval on some axis, together with the object that contributed to this interval. In this module it's a textbox or an image Merge overlapping segments Return a sorted list of disjoints segments together with the associated objects (t...
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import traceback def read_txt(*, file_path: str) -> str: """ Read specified file's text. Parameters ---------- file_path : str File path to read. Returns ------- txt : str Target file's text. """ with open(file_path, 'r', encoding='utf-8') as f: try: ...
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import requests import logging import json import gzip def get_geojson(commune, source="parcelles"): """ charge une donnée du PCI au format GeoJSON les sources disponibles sont: ['batiments', 'communes', 'feuilles', 'lieux_dits', 'parcelles', 'prefixes_sections', 'sections', 'subdivisions...
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def _get_interior_years(from_year, to_year, start_year, end_year): """Return the Rule years that overlap with the Match[start_year, end_year]. """ years = [] for year in range(start_year, end_year + 1): if from_year <= year and year <= to_year: years.append(year) return years
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def get_show(name, cursor): """returns None if TV series name does not exists in database Args: name: name of TV series cursor: cursor object """ sql = "select id from tvshow where name = %s" cursor.execute(sql, (name,)) result = cursor.fetchone() if result == None: return None else: return result[0]
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def dict_sweep(d, vals=[".", "-", "", "NA", "none", " ", "Not Available", "unknown"]): """ @param d: a dictionary @param vals: a string or list of strings to sweep """ for key, val in d.items(): if val in vals: del d[key] elif isinstance(val, list): for item i...
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import os import logging def find_sources_root(tree_root='csse332'): """ Find the root directory containing the sources for the website. :return: Returns the real path of the sources root. :rtype: str """ curr_dir = os.path.realpath(os.curdir).split('/') curr_dir[0] = '/' # adjust to hav...
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def distribute_indices_base(indices, nprocs, rank, allow_split_comm=True): """ Partition an array of "indices" evenly among a given number of "processors" This function is similar to :func:`distribute_indices`, but allows for more a more generalized notion of what a "processor" is, since the number of ...
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def blend_union(da, db, r): """ Blend union of the distances da, db with blend radius r. """ e = max(r - abs(da - db), 0) return min(da, db) - e * e * 0.25 / r
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def get_ring_param(sigma, v, sigma_g, v_g, dt, thick=True): """ This function finds the velocities and surface densities of the dust species and the gas only for the dust trapped ring. Parameters: sigma: 3-D list of 2 dimensional surface densities for dust species v: 3-D list of 2 dimensional velocities for...
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def get_subplot_rows_columns_figsize(number_subplots): """Get the size of a sub plot in (rows, columns), based on the number of subplots that are going to be plotted. Parameters ----------- number_subplots : int The number of subplots that are to be plotted in the figure. """ if number_...
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def linkcmp(link1, link2): """ comparison function for Link objects used to sort list of Link objects by 'from' node ascending and within that by 'to' node ascending """ if link1.init_node < link2.init_node: return -1 elif link1.init_node > link2.init_node: return 1 else: ...
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def combsort(array, scaling_factor): """ combsort(array, scaling_factor) -> list array -> [list]: A list of elements to be sorted using combsort scaling_factor -> [float]: A scalar that reduces the size of the gap every sweep (>1) """ steps = 0 gap = len(array) while ...
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