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def clean_config_for_pickle(full_conf): """Clean out any callable method instances, such as the gene_test_callback parameter passed to geneticalgorithm, as these are not pickleable. Acts in-place on full_conf parameter. Inputs: full_conf: The full_config dict structure, containing a 2-leve...
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import csv def read_connections_file(infile): """ Reads a two-column CSV file of integers into a list of tuples corresponding to indices of connected concepts. :param str infile: Path to the CSV file. :returns: List of int tuples of connections. :rtype: list """ connections = [] w...
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def do_enable_unwinder1(unwinders, name_re, flag): """Enable/disable unwinders whose names match given regex. Arguments: unwinders: The list of unwinders. name_re: Unwinder name filter. flag: Enable/disable. Returns: The number of unwinders affected. """ total = 0 ...
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import torch def look_back(input_tensor: torch.Tensor) -> torch.Tensor: """ Looks back one bucket """ shift = torch.cat([input_tensor[:, -1:], input_tensor[:, :-1]], dim=1) # [batch * head, n_buckets, bucket_length, d_k, rounds] concat = torch.cat([shift, input_tensor], dim=2) # [batch * h...
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def find_package_data(): """ Find package_data. """ return { 'jupyterlab': ['build/*', 'lab.html'] }
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from typing import Tuple def join_float(val: Tuple[float, float]) -> str: """Reverse split_float().""" low, high = val if low == high: return str(low) else: return '{!s},{!s}'.format(low, high)
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import requests def check_proxy(proxy_ip, proxy_port, protocol): """ Функция, которая проверяет прокси, пытаясь сделать запрос на указанный сайт.     Мы используем «wikipedia.org» в качестве теста, так как мы можем проверить анонимность прокси     путем проверки, совпадает ли возвращаемый заголовок «X-Client...
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def leapfrog(theta, r, grad, epsilon, f): """ Perfom a leapfrog jump in the Hamiltonian space INPUTS ------ theta: ndarray[float, ndim=1] initial parameter position r: ndarray[float, ndim=1] initial momentum grad: float initial gradient value epsilon: float ...
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import uuid def get_uuid1(): """Generate a UUID based on the host ID and current time Returns: s: UUID1 string. """ uid1 = uuid.uuid1() s = str(uid1) return s
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import random def _apply_func_with_prob(func, image, args, prob): """Apply `func` to image w/ `args` as input with probability `prob`.""" # Apply the function with probability `prob`. should_apply_op = random.random() + prob if should_apply_op >= 1.0: augmented_image = func(image, *args) ...
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import logging def get_classifier_input_size(nn_model): """Tries to guess the number of input units required by the classifier.""" num_ftrs = None try: num_ftrs = nn_model.classifier[0].in_features except: try: num_ftrs = nn_model.classifier.in_features except: ...
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from typing import Callable import re def get_formatter(env_var_name: str) -> Callable[[str], str]: """ Returns a formatter function for given environment variablel. :param env_var_name: name of environment variable :return: formatting function """ if env_var_name.endswith("PATH"): r...
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def create_empty_board(): """ a function that create an empty board """ return [["." for _ in range(9)] for _ in range(9)]
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def unescape(text): """ Do reverse escaping. """ text = text.replace('&amp;', '&') text = text.replace('&lt;', '<') text = text.replace('&gt;', '>') text = text.replace('&quot;', '"') text = text.replace('&#39;', '\'') return text
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from bs4 import BeautifulSoup def get_soup_from_static_html(html): """ Parameters ---------------- html: str/path obj the path to the html file Returns ----------------- soup: bs4 Soup obj """ with open(html, 'r') as fh: soup = BeautifulSoup(fh, 'html.parser') ...
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def form_yes_or_no(QUESTION: str, DEFAULT_NO: bool = True) -> bool: """ Single yes or no question without recursion. Credit: Inspired from @icamys commented on 29 Nov 2020 on Github, https://gist.github.com/garrettdreyfus/8153571 """ CHOICES = " [y/N]: " if DEFAULT_NO else "...
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def extract_name(fullname): """ Reads the csv and extracts names by splitting them as first/last name so that it can be passed to the API call. Note: The extra cases could have been avoided while forming the CSV i.e. improving on the design and structure of web scraper. """ full_name = fulln...
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import argparse def parse_args() -> argparse.Namespace: """引数を解析する Returns: argparse.Namespace: 引数情報 """ parser = argparse.ArgumentParser( prog="test_post.py", description="tensorflow-serving test script", add_help=True ) parser.add_argument( "--model_n...
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def unload_words() -> bool: """ Removes dictionary json from memory """ global WORDS_JSON WORDS_JSON = None return True
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def valid_priority_len(priority): """Checks for values with exactly one significant digit :param float priority: :return boolean: """ result = len(str(priority).rsplit('.')[-1]) == 1 return result
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def listAxes(axd): """ make a list of the axes from the dictionary of axes Parameters ---------- axd : dict a dict of axes, whose values are returned in a list Returns ------- list : a list of the axes """ if type(axd) is not dict: if type(axd) is l...
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def product_4x4(b,a) : """multiply two 4x4 matrices""" a1= a[0][0]*b[0][0]+a[0][1]*b[1][0]+a[0][2]*b[2][0]+a[0][3]*b[3][0] a2= a[0][0]*b[0][1]+a[0][1]*b[1][1]+a[0][2]*b[2][1]+a[0][3]*b[3][1] a3= a[0][0]*b[0][2]+a[0][1]*b[1][2]+a[0][2]*b[2][2]+a[0][3]*b[3][2] a4= a[0][0]*b[0][3]+a[0][1]*b[1][3]+a[0][2]*b[2][3]+a[0]...
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def pagetitle(string, remove_first=False, divider=' > '): """Convert a string of characters to page-title format. Args: string (str): The string to conert. remove_first (bool, optional): Remove the first instance of the delimiter of the newly formed title. Returns: str:...
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def create_business_hours_schedule(api, configuration, api_version, api_exception): """ Creates a schedule for an activity that occurs during normal business hours. :param api: The Deep Security API modules. :param configuration: Configuration object to pass to the api client. :param api_version: The v...
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def images_meta1(): """Image files metadata set.""" metadata = [ { "bucket": "object_bucket", "version_id": "object_version", "key": "jpgfile.jpg", "previewer": "" }, { "bucket": "object_bucket", "version_id": "objec...
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def substract_imageMean(data, img_mean): """ substract image-Mean of the images""" return data - img_mean
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def gen_post_id(reddit_obj_id): """ Generates the Elasticsearch document id for a post Args: reddit_obj_id (int|str): The id of a reddit object as reported by PRAW Returns: str: The Elasticsearch document id for this object """ return "p_{}".format(reddit_obj_id)
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def convert_md_references(md_text): """Method to convert markdown list to references url format""" if not md_text: return [] ref_list = [] md_text = md_text.replace("\n", "").strip() for ref in md_text.split("- "): if not ref: continue parts = ref.split("](") ...
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import numpy def normalize_array(arr): """Normalize the given array to be in range [0,1].""" minVal = numpy.amin(arr) maxVal = numpy.amax(arr) return (arr - minVal) / float(maxVal - minVal)
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def collection_to_dict(collection): """Utility function to construct collection dict with names.""" return {v.name[:v.name.rfind(':')]: v for v in collection}
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def merge_keys(sql_server): """ To match with their respective API's, we have a slightly different "merge_keys" value when a user is using snowflake. :param sql_server: :return: """ sql_name, _ = sql_server if sql_name == "snowflake": return {"list": "list", "sell": "sell"} ...
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def remove_rows_containing_invalid_values(data): """ This function clears invalid values. """ data.drop(data[(data.bedrooms <= 0) | (data.bathrooms <= 0) | (data.sqft_living <= 0) | (data.sqft_lot <= 0) | (data.floors <= 0) | (data.condition <= 0) | ...
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def _ofc(id): """OFC ID converter.""" return "ofc-%s" % id
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def snake2pascal(target: str) -> str: """Convert snake case to pascal case Args: target (str) Returns: str """ return ''.join(map(lambda x: x.title(), target.split('_')))
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import argparse def set_args(): """ Establish the command line parameters that will be supported when executing this utility. :return: None """ description = 'Assignment Program utility used to apply rules to the MassHeath Spreadsheet.' parser = argparse.ArgumentParser(description, ...
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def get_plot_title(main, model, prefix=""): """ Constructs a sensible plot title from the ``model``. """ if main is not None: main = prefix title = model.get_title() if title: main += f": {title}" return main
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import stat def calc_mode( sticky=False, isuid=True, isgid=True, type=stat.S_IFREG, owner_read=True, owner_write=True, owner_exec=True, group_read=True, group_write=True, group_exec=True, other_read=True, other_write=True, other_exec=True, ): """helper function to calculate the mode bits of a file.""" ...
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import os def getNetworKitRoot(): """ Returns an absolute path to the project root (which is derived from the module's absolute path) """ return os.path.realpath(os.path.join(os.path.dirname(os.path.realpath(__file__)), "..", "..", ".."))
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import json def generateArmyData(units_info): """ Parameters ---------- units_info : dict Returns ------- units : list[dict] """ i = 1 units = [] while 'js_barracksSlider{:d}'.format(i) in units_info: # {"identifier":"phalanx","unit_type_id":303,"costs":{"citizens":1,"wood":27,"sulfur":30,"upkeep":3,"co...
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def get_limit_spec(limit): """ Based on an input *limit* string of the form: <system>.<type>.<direction>.<qualifier> (where the "qualifier" element is optional) return the various pieces into a dictionary for convenience. Parameters ---------- limit : str The input limit s...
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def unpack_quantity(row, concept, value): """Unpack row like {"variable": [{"concept":<concept>, <value>:_i_want_this_}]} Args: row (dict): Row of Worldbank API data. concept (str): The name of the dataset containing the variable. value (str): The name of the variable to unpack. Ret...
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def serializeEdge(edge): """Return the Edge as native Python datatypes, fit for json. Edges only reference Knobs, so we have to store their Node id here to be able to correctly associate it once reconstructed. """ return { "source_nodeId": edge.source.node().uuid, "source_name": edg...
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def no_preproc(x, **kwargs): """Identity function that can be passed used as feature_preproc_fn in Dataset, since lambda is not pickleable and doesn't take an arbitrary number of params.""" return x
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import math def quaternion_from_matrix(M): """Returns the 4 quaternion coefficients from a rotation matrix. Parameters ---------- M : list[list[float]] The coefficients of the rotation matrix, row per row. Returns ------- [float, float, float, float] The quaternion coeffi...
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import os import fnmatch def getNextFolder(currentFolderPath, pattern): """This function returns the path of the folder that directly follows (alphabetically and at the same level) a given folder having a specific name pattern This method receives the path of a folder called currentFolderPath and has to ...
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def type_error_tree_roof(df): """ Calculate type 1 error and type 2 error. """ df.loc['type_1 error','roof'] = (1 - df.loc['Edge','roof']/df.loc[ 'sum','roof'])*100 df.loc['type_2 error','roof'] = (df.loc['Edge','total']-df.loc['Edge','roof'])/ \ (df.loc['su...
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def encode_attempt_metrics(attempt, common_tags): """Encode the attempt metrics using InfluxDB Line Encoding.""" metrics = [] def escape(value): """Escape the value for influxdb.""" return (str(value) .replace('"', r'\"') .replace(',', r'\,') .replace('=', r'\=') ...
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import os from pathlib import Path def get_free_bytes(path: Path) -> float: """ Get free bytes """ statvfs = os.statvfs(path) free_bytes = statvfs.f_bavail * statvfs.f_frsize return free_bytes
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def subset_data_for_bounding_box(data, min_lat, max_lat, min_lon, max_lon): """ Return a subset of data within the bounding lat/lon box The function assumes that lat/lon are not coordinates in the data """ sub = data.where( (data.lat > min_lat) & (data.lat <= max_lat) & (data.lon > min_lon) ...
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from unittest.mock import patch def patch_bond_device(return_value=None): """Patch Bond API device endpoint.""" return patch( "homeassistant.components.bond.Bond.device", return_value=return_value, )
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import os def clean_up_dir(files: list) -> list: """ :param files: List of files in the project directory :return: list Cleans up trashed files and gives original files """ original_files = list() for file in files: if "rewritten.java" in file: os.remove(file) ...
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def is_local_ressource(path): """ Check if given path is a local ressource. Arguments: path (string): Ressource path. Returns: bool: True if file path, else False. """ if not path.startswith("http://") and not path.startswith("https://"): return True return False
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import argparse import pathlib def parse_args(): """Argument parsing function :return: namespace containing user provided arguments :rtype: argparse.Namespace """ parser = argparse.ArgumentParser( description="Setup a directory from a template." ) parser.add_argument(dest="templa...
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import copy def instancemethod(f): """ Checks if an instance of a class changes while executing f. If so raise an error. USE AS DECORATOR :param f: function = method to overload :return: obj = return of the function """ def wrapper(self, *args, **kwargs): atts = copy.deepcopy(self...
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def strip_signature_from_subject(content): """Assume --\n is marker for email signature and return everything before. """ return content.split('--')[0]
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def arrange_for_response(board_data): """ レスポンスできるように成型する :param board_data: ボードのデータ(DataFrame) :return: コンマ区切りの文字列に変形して返す """ ret_str = '' for r in range(len(board_data.columns)): for c in range(len(board_data.index)): ret_str += str(board_data.iloc[r, c]) if...
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import struct def unpack_int32(bin_data, pos): """ Convert 4 byte data """ return struct.unpack(">I", bin_data[pos:pos+4])[0]
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def factorial_recursion(integer) -> int: """This function calculate factorial using recursion.""" if integer > 1: return integer * factorial_recursion(integer - 1) else: return 1
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import itertools def compress(string: str) -> str: """Return string represented as tuples of characters and their count.""" return " ".join([ "({})".format(", ".join((str(len(list(grp))), char))) for char, grp in itertools.groupby(string, lambda c: c) ])
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def _trim_front(strings): """ Trims zeros and decimal points """ trimmed = strings while len(strings) > 0 and all([x[0] == ' ' for x in trimmed]): trimmed = [x[1:] for x in trimmed] return trimmed
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import os def md5sum_folder(folder_name): """ returns the md5sum of a file using the command `tar -cf - {folder_name} | md5sum` """ return os.popen(f'tar -cf - \'{folder_name}\' | md5sum').read()
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def display_table(table): """Display values in a table format. table: an iterable of rows, and each row is an iterable of values. """ html = "" for row in table: row_html = "" for col in row: row_html += "<td>{:40}</td>".format(str(col)) html += "<tr>" + row_html ...
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from datetime import datetime def from_datetime(value: datetime) -> str: """Convert from datetime to ISO8601-formatted string. Parameters ---------- value : datetime The datetime to be converted. Expected in UTC. Returns ------- str ISO8601-formatted string Examples ...
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import os def check_virtualenv(ctx, virtualenv_path): """ Check if virtualenv is initialized in virtualenv folder (based on bin/python file). """ r = ctx.run(' '.join([ os.path.join(virtualenv_path, 'bin/python'), '--version' ]), warn=True, hide='both') return r.ok
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def session_status(space): """Returns the current session status""" return space.wrap(space.ec.interpreter.session.status)
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def get_attack_details(ipal_entry): """ Parse the attack-details IPAL field. The field is expected to have the format "<attack category>;<attack type>". Example: "2;12". """ split = ipal_entry["attack-details"].split(";") assert ( len(split) == 2 ), "'attack-details' field in IP...
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def little_endian_data() -> bytes: """Little endian data fixture.""" return b"\x00\x00\x00\x05\x00\x00\x00\x06"
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def generate_config(context): """Entry point for the deployment resources.""" properties = context.properties project_id = context.env['project'] dataset_id = properties['datasetId'] location = properties['location'] supported_types = { 'dicomStores': 'dicomStoreId', 'fhirStores': 'fhirStoreId'...
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import time def get_current_time(time_form: str="%Y%m%d%H%M%S"): """ get_current_time from time Args: time_form: str, string form of return time Returns: time_current: str """ time_now = int(time.time()) time_local = time.localtime(time_now) time_current = time.strftime...
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def get_marc_as_list(raw_marc): """Method takes Solr MARC format and splits into a list of field dictionarys :param raw_marc: Raw MARC string :rtype: List of field dictionary """ output = [] marc_listing = raw_marc.split("=") for row in marc_listing: output.append({'tag':row[0:3], ...
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def _distribute_data_to_mouse(mouse_data): """ This function distributed the mouse object information into the python dictionary object for easier json parsing process """ dict_m = { 'physical_id': mouse_data.physical_id, 'handler': mouse_data.handler, 'gender': mouse_data.ge...
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import math def calculate(point1, point2): """ Calculate the distance between two points (point1 and point2) on the Earth's surface using the 'spherical law of cosines' formula. Input: point1 : two floating point numbers between -180 and 180, where positive indicates North/East ...
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def find_element_in_item_group(element, item_group): """ 在ItemGroup里面寻找相应的的element :param element: :param item_group: :return: """ keyand = item_group.__getattribute__('And') keyor = item_group.__getattribute__('Or') keynot = item_group.__getattribute__('Not') if keyand is not No...
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def outOfFrameCodonsThis(t): """ report the number of outOfFrameCodonsThis """ for a in t.annotations: if 'outOfFrame' in a.labels: for l in a.labels: if l.startswith('outOfFrameCodonsThis'): return int(l.split('_')[1]) return 0
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def update_repository_name(repository): """Update given repository name so it won't contain any prefix(es).""" lastSlash = repository.rfind("/") # make sure we use just the repo name if lastSlash >= 0 and lastSlash < len(repository) - 1: return repository[1 + lastSlash:] else: retur...
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def request_input(message, choices): """ Request user input. Parameters ---------- message : str Message to display choices : list of str List of recognized inputs """ while True: choice = input(message).strip().lower() if choice in choices: ...
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def _append_norm(ktl0, norm_types): """Generate human-readable labels for multiple norms.""" ktl = {} for norm_type in norm_types: for key, val in ktl0.items(): ktl['%s/%s' % (key, norm_type)] = '%s(%s)' % (val, norm_type) return ktl
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def get_rules_with_scope(rules, scope): """ from the given collection of rules, select those with the given scope. args: rules (List[capa.rules.Rule]): scope (str): one of the capa.rules.*_SCOPE constants. returns: List[capa.rules.Rule]: """ return list(rule for rule in rules...
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def _SharedPrefix(pattern1, pattern2): """Returns the shared prefix of two patterns. Args: pattern1: A handler's pattern string pattern2: A handler's pattern string Returns: The shared prefix of the two patterns, up to the index of the first wildcard of either pattern. For example, the shared pre...
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def get_enum_strings(enum_strings, enum_dict): """Get enum strings from either `enum_strings` or `enum_dict`.""" if enum_dict: max_value = max(enum_dict) return [enum_dict.get(idx, '') for idx in range(max_value + 1)] return enum_strings
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def file_upload_event(): """ Generates File Upload Event""" return { "Records": [ { "eventVersion": "2.1", "eventSource": "aws:s3", "awsRegion": "us-east-1", "eventTime": "2020-08-19T13:18:56.519Z", ...
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from typing import List def sauvegarde_fichier(nom_fichier : str, Contenu : List[str]) -> None: """Précondition : nom_fichier est un nom correct de fichier Sauvegarde le Contenu comme lignes de texte dans le fichier identifié par nom_fichier Attention : si le fichier existe déjà son contenu sera e...
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def make_columns(repetitions, n_splits): """Provides column names for the tables of all predictions (from each split of each rep). Parameters ---------- repetitions : int Repetitions of the n-fold validation n_splits : int number of splits in KFold Returns ------- l...
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def id_is_generic(inid, inyear): """ Test to see if an ID is one of the generic IDs :param inid: ID from marine report :param inyear: year we are checking for :type inid: string :type inyear: integer :return: True if the ID is generic and False otherwise :rtype: logical Cer...
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def _get_noun_preposition_text(dictionary: dict, text: str) -> str: """ Get prepositional details for a noun. @param dictionary: Dictionary holding the details to be added @param text: Input noun text @return: The updated noun text or the original text if no change is warranted """ new_text...
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def reduce_broadcast(grad, var_shape): """ Sum-reduce axes of `grad` so its shape matches `var_shape. This the appropriate mechanism for backpropagating a gradient through an operation in which broadcasting occurred for the given variable. Parameters ---------- grad...
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import torch def convolve_distance_modulus_with_lf(histogram, lf_number, distance_mod_dim=-1): """Helper function that convolves a histogram as a function of distance modulus with a luminosity function. Distance modulus dimension should be specified in distance_mod_dim, o...
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def merge_dicts(dict1, dict2): """ Merge two dictionaries. Parameters ---------- dict1, dict2 : dict Returns ------- dict_merged : dict Merged dictionaries. """ dict_merged = dict1.copy() dict_merged.update(dict2) return dict_merged
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def breakPalindrome(self, palindrome): """ :type palindrome: str :rtype: str """ p1 = 0 p2 = len(palindrome)-1 new_pal = list(palindrome) while p1 < p2: if new_pal[p1] != "a": new_pal[p1] = "a" return "".join(new_pal) p1+=1 p2-=1 if le...
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def select_all_columns_except_some(df, column_names): """Select all columns in the dataframe except those specified in ``column_list``. Args: df (pd.DataFrame): Dataframe. column_names (list): List of column names. Returns: pd.DataFrame: Dataframe with the columns removed. ...
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import json def reject(status_code, **kwargs): """ Bad request. :param int status_code: Rejection status code :param dict kwargs: Rejection body JSON :return dict: Rejection response """ body = json.dumps(kwargs) if kwargs else '' headers = { 'content-length': len(body), ...
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def preparePandas(timeData, sampleSizes, name): """Create DF for sns-plots""" preparePd = list() for time, sample in zip(timeData, sampleSizes): preparePd.append([str(name),time, sample]) return preparePd
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import torch def to_torchaudio(tensor, dim: int = -2): """Converts complex-like torch tensor to torchaudio style complex tensor. Args: tensor (torch.tensor): asteroid-style complex-like torch tensor. dim(int, optional): the frequency (or equivalent) dimension along which real and ...
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def mock_search_tasks(mocker): """Patch the helpers so they don't fire celery tasks""" return mocker.patch("channels.api.search_task_helpers")
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def interpret_data(data: list) -> dict: """Transforms json data to be separated per commit.""" reformat = {} for entry in data: # Entries that could not be linked to a file # are ignored. if not entry["file"]: continue sha = entry["satd_sha"] if sha in...
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def parse_stream(stream): """This function parses the contents of a stream to generate a list of lines. This function removes comments delimited by '#', ingores empty lines, and leading and trailing whitespace. Args: stream : A file that has been open()'d Returns: A list of lines. """ lines = ...
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def is_pairs(pairs): """ returns a check if the data is pairs of key-value tuples :Parameters: ------------ pairs : tuple tuples of key-value tuples. :Returns: --------- bool """ return isinstance(pairs, tuple) and min([isinstance(item, tuple) and len(item) == 2 for ite...
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def roc(counts): """Function computing TPR and FPR. Output arguments: ================= tpr : float True positive rate fpr : float False positive rate """ tp, fp, tn, fn = counts return float(tp) / (tp+fn), float(fp) / (fp+tn)
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def null_check_fn(struct_path): """ Checking Structure from input directory will always return False. """ return False
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def user_id(msg): """ Use the userid from the msg as the user search criteria Args: msg (errbot.backends.base.Message): The message from the bot that triggered the LDAP lookup Returns: str: The user ID that will be used to search LDAP """ if hasattr(msg.frm, "userid"): ...
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