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import re def strip_html_whitespace(html_text): """ Whitespace in the HTML obtained is a pain when scanning for next_sibling Clean up """ html_text = re.sub(">\s*", ">", html_text) html_text = re.sub("\s*<", "<", html_text) return html_text
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import csv def get_file_entry_names(path): """Get the names of all entries in the food dictionary or a log file. :param path: A string of the food dictionary or log file pathname. :returns: A list of the entry names associated with each entry in the food dictionary or a log file. """ entry_names...
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def pair_distance(cluster_list, idx1, idx2): """ Helper function that computes Euclidean distance between two clusters in a list Input: cluster_list is list of clusters, idx1 and idx2 are integer indices for two clusters Output: tuple (dist, idx1, idx2) where dist is distance between cluster_l...
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def solution(num): """Find the maximal sequence of consecutive ones""" try: num = int(num) count = 0 if(num > 0): while(num != 0): num = (num & (num << 1)) count += 1 return count except ValueError: return 'Invalid input.'
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def get_fn_pos_by_rules(pos, token): """ Rules for mapping NLTK part of speech tags into FrameNet tags, based on co-occurrence statistics, since there is not a one-to-one mapping. """ if pos[0] == "v" or pos in ["rp", "ex", "md"]: # Verbs rule_pos = "v" elif pos[0] == "n" or pos in ["$"...
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def cropRect(rect, cropTop, cropBottom, cropLeft, cropRight): """ Crops a rectangle by the specified number of pixels on each side. The input rectangle and return value are both a tuple of (x,y,w,h). """ # Unpack the rectangle x, y, w, h = rect # Crop by the specified value x += cropLeft y += cropTop w ...
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def all_keys(key_possible_bytes, key_part=(), offset=0): """ Produce all combinations of possible key chars """ keys = [] if offset >= len(key_possible_bytes): return [bytes(key_part)] for c in key_possible_bytes[offset]: keys += all_keys(key_possible_bytes, key_part + (c,), offs...
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def utf_jungle(sym1, sym2): """ Input: sym1, sym2: symbols, str() type Output: summ of all symnols in range """ code1 = ord(sym1) code2 = ord(sym2) hi_code = max(code1, code2) low_code = min(code1, code2) sum = 0 for i in range(low_code, hi_code + 1): s...
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import typing def fortran_test_generator() -> typing.Dict[str, str]: """ provides simple code block elements to test compiler feature level """ tests = { "minimal": "end", "f2008rank15": "integer :: a(1,1,1,1,1,1,1,1,1,1,1,1,1,1,1); print*,rank(a);end", "f2008contiguous": "pri...
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def Rels_attach(self, rel): """ Inserts *rel* into *self*, performing additional necessary bindings. Return value: *rel.target_part* (or *rel.target_ref*, if *rel.is_external*). """ self[rel.rId] = rel if rel.is_external: return rel.target_ref target = rel.target_part self._target_parts_by_rId[rel...
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def set_legend(ax, lines, loc=0, ncol=1): """set legend Function generating a custom legend, see [1] for more options Refs: [1] https://matplotlib.org/3.1.1/api/_as_gen/matplotlib.pyplot.legend.html Args: ax (object): figure part for which the legend is intended lines (list): list o...
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def get_columns_to_drop(year): """ Returns a list of strings indicating which columns to drop for the data in the given year :param year: the year of the data :return: a list of which columns to drop for the given year; "us" is always dropped """ cols_to_drop = ["us"] # Always drop "us"...
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def process_string(input_str, offset=37): """Pretty Print stings too long for mouse-over. Parameters ---------- input_str : str The sting to-reformat offset : int The number of characters used as spacing for a new line. Returns ------- string re-formatted to fit in spec...
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from typing import Any def is_chars(obj: Any) -> bool: """Check if an object is one of the built-in character types. The built-in data types representing characters in Python 3 are: str, bytes, bytearray Arguments: obj: object to be checked Returns: True if the object is an ...
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def invert(x,n): """ Inverts the bits of a positive integer. """ return x ^ ((1 << n) - 1)
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def is_top_down(lines): """ Return `True` if dates in the given lines go in an ascending order, or `False` if they go in a descending order. If no order can be determined, return `None`. The given `lines` must be a list of lines, ie. :class:`~taxi.timesheet.lines.TextLine`, :class:`taxi.timesheet.lines....
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def merge_dicts(d1, d2): """merges/reduces two dictionaries""" d1.update(d2) return d1
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def ogimage(url, html): """Finds the property="og:image" in the html for the preview""" og_image = html.find_all(property="og:image") for image in og_image: return image.get('content') return
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def cleanfield(value): """ remove spaces """ if not value: return None value = str(value) value = value.strip() return value
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def union(*graphs): """Return a graph having all edges from the argument graphs.""" out = {} for G in graphs: for v in G: out.setdefault(v, set()).update(list(G[v])) return out
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from typing import List def combinationSum4(nums: List[int], target: int) -> int: """ Time: O(n * target) Space: O(target) """ dp = [0 for _ in range(target + 1)] dp[0] = 1 for i in range(target): for num in nums: if i + num <= target: dp[i + n...
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import os import textwrap import stat def executable_factory(monkeypatch, tmpdir): """ Factory for creating executable files from contents. Also dedents the contents. """ monkeypatch.setenv('PATH', tmpdir, prepend=':') def factory(name, contents='', dedent=True): test_cmd_path = os.path.join(st...
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def my_pow(m: int, n: int) -> float: """Binary Exponentiation Args: m:int, n:float Returns:pww """ res = 1.0 i = abs(n) while i: if i & 1: res *= m m *= m i = i >> 1 if n < 0: return 1.0 / res return int(res)
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import argparse def process_command_line(argv): """ Return a 2-tuple: (settings object, args list). `argv` is a list of arguments, or `None` for ``sys.argv[1:]``. """ argv = argv[1:] # initialize the parser object: parser = argparse.ArgumentParser( description="Search a path for t...
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def _get_quote_indices(line, escaped): """ Provides the indices of the next two quotes in the given content. :param str line: content to be parsed :param bool escaped: unescapes the string :returns: **tuple** of two ints, indices being -1 if a quote doesn't exist """ indices, quote_index = [], -1 fo...
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def import_from(module, name): """ Try to import a module and class directly instead of the typical Python method. Allows for dynamic imports. """ module = __import__(module, fromlist=[name]) return getattr(module, name)
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import random import itertools def random_tuple_list(lst1, lst2, lb=1): """ Generate a random list of tuples (x,y) where x is in lst1 and y is in lst2 """ len_lst1 = len(lst1) len_lst2 = len(lst2) k = random.randint(lb,max(len_lst1,len_lst2)) return random.sample(list(itertools.product...
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from datetime import datetime def timestamp(): """ Generates an ISO 8601 timestamp for the current UTC time. Returns: str: ISO 8601 timestamp """ return datetime.utcnow().strftime('%Y-%m-%dT%H:%M:%SZ')
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def create_email_field_dict(field_name, field_type, field_value, field_displayed_text, is_allow_create_indicator, is_href, is_editable, ...
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def inflate(size, margin, mul=1): """ Increase size (a size or rect) by mul multiples of margin margin's items are interpreted as those of a CSS margin. If size is a 4-tuple, its "sides" are moved outwards by the corresponding items of margin; if it is a 2-tuple, it is treated as if it were a rect ...
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def Cindex (i,j,k,Nx,Ny,Nz): """z changes fastest """ return i*Nz*Ny+j*Nz+k
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from typing import TextIO import csv def parse_chanjo_sexcheck(handle: TextIO): """Parse Chanjo sex-check output.""" samples = csv.DictReader(handle, delimiter='\t') for sample in samples: return { 'predicted_sex': sample['sex'], 'x_coverage': float(sample['#X_coverage']), ...
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from pkg_resources import parse_version from setuptools import __version__ def have_environment_marker_support(): """ Check whether setuptools has support for PEP-426 environment markers. Based on the ``setup.py`` script of the ``pytest`` package: https://bitbucket.org/pytest-dev/pytest/src/default/s...
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import socket def bind(port, socket_type, socket_proto): """Try to bind to a socket of the specified type, protocol, and port. This is primarily a helper function for PickUnusedPort, used to see if a particular port number is available. For the port to be considered available, the kernel must support ...
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def count_occurances(comment, word): """ A helper function to get the number of words in a comment. """ comment = comment.replace('?', ' ') comment = comment.replace('.', ' ') comment = comment.replace('-', ' ') comment = comment.replace('/', ' ') a = comment.split(" ") count = 0 ...
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import random def choose_random_elements(_list, num_elements=5000): """ Choose a certain number of elements from given list randomly and return the original list without the chosen elements as well as a list of the chosen elements. :param _list: list with elements to be chosen from :param num_...
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def hybridmc_new_files(pref): """file formats for HybridMC output and the following zcombine output""" pref = pref.strip() mcmc = pref + '.mcmc' mcscrn = mcmc + '.scrn' mczc = mcmc + '.zc' return (mcmc, mcscrn, mczc)
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def clip_by_value(t, clip_value_min, clip_value_max): """ Clips tensor values to a specified min and max. Parameters ---------- t : tensor A Tensor or IndexedSlices clip_value_min : tensor A 0-D (scalar) Tensor, or a Tensor with the same shape as t. The minimum value to clip by ...
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from typing import List import argparse def parse_args(args: List[str]) -> argparse.Namespace: """Parse arguments from the cli""" parser = argparse.ArgumentParser(prog="publish-shared-event", description="List the content of a folder") parser.add_argument("-r", "-region", dest="region", help="Set AWS Regi...
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import json def get_secret_dict(service_client, arn, stage, token=None): """Gets the secret dictionary corresponding for the secret arn, stage, and token This helper function gets credentials for the arn and stage passed in and returns the dictionary by parsing the JSON string Args: service_clie...
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def assertVolumesEqual(test, first, second): """ Assert that two filesystems have the same contents. :param TestCase test: A ``TestCase`` that will be the context for this operation. :param Volume first: First volume. :param Volume second: Second volume. """ first = first.get_filesy...
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import pickle def read_pkl(pkl_filename): """Loads pickle file.""" with open(pkl_filename, "rb") as pkl_file: return pickle.load(pkl_file)
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import math def AMS(s, b, br=10.0): """ Approximate Median Significance defined as: AMS = sqrt( 2 { (s + b + b_r) log[1 + (s/(b+b_r))] - s} ) where b_r = 10, b = background, s = signal, log is natural logarithm """ radicand = 2 *( (s+b+br) * math.log (1.0...
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def conteo_buenas_notas(notas: dict) -> int: """ Materias Excepcionales Parámetros: notas (dict): Diccionario con las notas del estudiante Retorno: int: Número de materias excepcionales """ excepcionales = 0 if notas["Matematica"] > 4: excepcionales += 1 if notas["Ingles"...
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def time_to_iso(time_struct): """ time to iso format """ #return '%(hour)s:%(minute)s' % time_struct hour = int(time_struct['hour']) if not hour: hour = '00' return '%s:%s' % (hour, time_struct['minute'])
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from pathlib import Path def relative_path_for(provided_path: Path, root_path: Path) -> Path: """ Return relative path to root is provided path is on root_path, If not return the provided path Parameters ---------- provided_path : Path absolute or relative path root_path : Path ...
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def download_file(s, url, data_dir): """ Download the provided file and place it in data_dir """ local_filename = data_dir + url.split('/')[-1] # NOTE the stream=True parameter req = s.get(url, stream=True) with open(local_filename, 'wb') as local_f: for chunk in req.iter_content(chu...
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import os import re import subprocess def _pdf_to_txt(file_path, dst_dir, file_name): """ Uses the pdftotxt unix util, with --layout option, to convert file_name to .txt and save in dst_dir Notes ----- Download and install Xpdf from http://www.foolabs.com/xpdf/download.html Follow the ins...
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def vsstd(a, s=0.1): """Normalize the image range for visualization.""" return (a - a.mean()) / max(a.std(), 1e-4) * s + 0.5
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def has_file(conn, path, mirror_id): """check if file 'path' exists on mirror 'mirror_id' by looking at the database. path can contain wildcards, which will result in a LIKE match. """ if path.find('*') >= 0 or path.find('%') >= 0: oprtr = 'like' path = path.replace('*', '%') ...
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import random def get_random_block_from_data(data, batch_size): """Randomly select batch_size number of contiguous samples.""" start_index = random.randint(0, data.shape[0] - batch_size) return data[start_index:(start_index + batch_size)]
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import torch def l2_loss(input, target, size_average=True): """ L2 Loss without reduce flag. Args: input (FloatTensor): Input tensor target (FloatTensor): Output tensor Returns: [FloatTensor]: L2 distance between input and output """ if size_average: return torch.me...
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def GetNextQtnodeBounds(qtnode, x, y, size): """Calculate next level boundary for qtnode. If the qtnode has further precision, call this routine recursively. Args: qtnode: The remaining string of the qtnode. x: Current left of the qtnode (degrees). y: Current bottom of the qtnode (degrees). si...
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from typing import Any from typing import Dict from typing import List def get_data_list_from_timeseries(data: Any) -> Dict[str, List[float]]: """Constructs a Dict as keys are the container names and values are a list of data taken from given timeseries data.""" if data['status'] != 'success': rai...
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import yaml def test_dataset_serialization(client, dataset, data_file): """Test Dataset serialization.""" def load_dataset(name): with open(str(client.get_dataset_path(name))) as f: return yaml.safe_load(f) d_dict = load_dataset('dataset') expected_fields = [ '_id', '_la...
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from typing import OrderedDict def find_overlaps(orfs_found): """Associates overlapping ORFs based on their start-stop intervals""" # initialize dictionary to store associations for each ORF overlaps_found = { i : [] for i in range(1, len(orfs_found)+1) } processed_orfs = [] # sort ORFs by asce...
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def divisibleBy3And5(num): """assumes num is a number returns True is num is divisible by 3 and 5, else 5 """ return num % 3 == 0 and num % 5 == 0
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def conflicted(path_to_file): """Whether there are any conflict markers in that file""" for line in open(path_to_file, 'r'): for marker in '>="<': if line.startswith(marker * 8): return True return False
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from typing import Dict from typing import Any def _get_client_ip_from_meta(meta: Dict[str, Any]) -> str: """Attempt to get the client's IP by checking common HTTP Headers. Returns none if no IP Could be found""" headers = ( "HTTP_X_FORWARDED_FOR", "HTTP_X_REAL_IP", "REMOTE_ADDR", ...
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def getDate(year, month, day): """ Get date string from year month and day""" return str(year)+'%02d' %month+'%02d' %day
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def mutate_individual(logger, ind): """ Simply calls the mutate function of the given individual. Args: logger (:obj:`logging.Logger`): A logger to log with ind (:obj:`actions.strategy.Strategy`): A strategy individual to mutate Returns: :obj:`actions.strategy.Strategy`: Mutate...
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def boolean_bitarray_get(integer, index): """The index-th-lowest bit of the integer, as a boolean.""" return bool((integer >> index) & 0x01)
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import os def file_readable (fn, **kwargs): """Check if the file is readable""" return os.path.isfile (fn) and os.access (fn, os.R_OK)
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def ExtractUnits(hf,k): """ Returns all the data for a single key (column) in a given HDF5 file. Parameters ---------- hf : File The HDF5 where the data is stored. Example: HDF5_File = h5py.File(filename, 'r') k : str the name of the column that is to be extr...
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def _get_columns(x): """ retrieve the columns of something if it exists """ if hasattr(x, "columns"): return list(x.columns) else: return None
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import sys def main(): """ Set high so can never break a solvable algorithm if not entered """ number_of_solutions = 1000 print("Welcome to our case Chips and Circuits! By De Mandarijntjes \n --------------------------") net_option = input("Please enter a integer from 1 to 6 to choose a netlis...
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def step1(all_voronois, structure, radius, anions, min_neighbors): """ Remove sites with Voronoi points that have fewer than 4 neighboring anions :param all_voronois: (List of Sites) list of all sites in structure1 containing Voronoi points :param structure: (Structure) target structure :param radi...
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import hashlib def branch_hash_worktree_path_builder(branch): """Returns a relative path for a worktree based on the hash of the branch name. """ return hashlib.md5(branch.encode("utf-8")).hexdigest()
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def from_gca_linestring(gca_obj): """ Converts LineString GCA to an EGF string. Returns ------- egf_str : str LineString GCA as an EGF string """ if gca_obj.geometry_type != "LS": raise ValueError(f"Expected geometry type to be 'LS' and got '{gca_obj.geometry_type}' instea...
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def rm_additional_rots_and_trans(results): """ Removes the first 6 rotations and translations, to leave the required 3N vibrations. """ for key, value in results.items(): results[key] = value[6:] return results
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from typing import Sequence from typing import Any from typing import Callable def _transform_args( args: Sequence[Any], varnames: Sequence[str], transform_func: Callable[[Any], Any], conditional: Callable[[str], bool] = lambda _: True, ) -> Sequence[Any]: """Transform given args if condition is m...
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def get_tableau_values(data): """ Tableau's data lists all the values used throughout the view in a single place, and the display information about each chart references these values by data type (int, cstring, etc.) and index. Return a simplified version of this: a dict mapping data types to lists...
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from typing import Tuple def generate_command_parameters(command: str) -> Tuple[str, int]: """Helper function to generate parameters from commands passed as string. A command string is converted to a (action: str, step: int) tuple. Pattern is: command is an "action step" string than we can split ...
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def find_peak(f, xmin, xmax): """Find integer peak of f(x) for x \in [xmin, xmax]. T = O(log(n)). The frist derivative of f(x) must be monotonic. (by YL) +---------------+----------------+ | xmax - xmin | # calls of f | +---------------+----------------+ | 50 | 23 | ...
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def intToRoman(n: int) -> str: """Converts an integer to Roman form Args: n (int): Integer to convert Returns: str: Integer in Roman form """ return 'M' + intToRoman(n - 1000) if n >= 1000 \ else ('CM' + intToRoman(n - 900) if n >= 900 \ else 'D' + intToRoman(n ...
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import torch def out_binary_weighting(tr_out, n_qubits, trans_type='mean'): """ Returns two numbers of mu and sig for training the output. The input is soething that has been transformed to lie between 0 and 1 """ weights = torch.tensor([2 ** (n_qubits - i - 1) for i in range(n_qubits)]) if len(t...
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def usable_decode(text: bytes) -> str: """Decode the text so it can be used. vars: :param text: a string of bytes that needs decoding :returns: string """ try: decoded_text = text.decode("utf8") except: decoded_text = text.decode("latin1", errors="replace"...
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def get_adjusted_price(price, currency, currency_data): """Return adjusted price and name of company the label is referring to. If a user wants the price value in a currency different from the dollar this function computes the stock value in such currency. :param price: The price of the stock of the c...
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import os def __return_file_path(file_path, app): """ Expands the ~/ into current users home directory """ return os.path.expanduser(file_path.format(app))
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def wrapTex(tex): """ Wrap string in the Tex delimeter `$` """ return r"$ %s $" % tex
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def split_geolocation_string(config, geolocation_string): """Fields of type 'geolocation' are represented in the CSV file using a structured string, specifically lat,lng, e.g. "49.16667, -123.93333". This function takes one of those strings (optionally with a multivalue subdelimiter) and return...
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def lift(rho, v, S, C_l): """ >>> lift(1.225, 17, 0.78, 1.2) 165.68370000000002 """ return rho * v**2 * S * C_l / 2
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import random def raffle(tickets, lots): """Run a raffle, producing a list of randomly selected winners. Arguments: tickets -- a list containing (name, number of tickets purchased) tuples lots -- a list of lots available to be won Each ticket can only win once, but people purchasing multiple tic...
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def fix_projection(shape, axes, limits): """Fix the axes and limits for data with dimension sizes of 1. If the shape contains dimensions of size 1, they need to be added back to the list of axis dimensions and slice limits before calling the original NXdata 'project' function. Parameters ...
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def macaddr_pack(data, bytes = bytes): """ Pack a MAC address Format found in PGSQL src/backend/utils/adt/mac.c, and PGSQL Manual types """ # Accept all possible PGSQL Macaddr formats as in manual # Oh for sscanf() as we could just copy PGSQL C in src/util/adt/mac.c colon_parts = data.split(':') dash_parts = d...
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import argparse def parse_args(): """Parse input arguments.""" parser = argparse.ArgumentParser(description='Head pose estimation for images using the Hopenet network.') parser.add_argument('--gpu', dest='gpu_id', help='GPU device id to use. Default: 0', default=0, type=int) pa...
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import sys def trace_function(funcobj, *args, **kwargs): """Call a function, and return its locals""" funclocals = {} def _tracefunc(frame, event, arg): # Activate local trace for first call only if frame.f_back.f_locals.get('_tracefunc') == _tracefunc: if event == 'return': ...
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import os def _read_content_or_path(content_or_path): """ If `content_or_path` contains ``\\n``, return it. Else assume, that it is path and read file at that path. Args: content_or_path (str): Content or path to the file. Returns: str: Content. Raises: IOError: whhe...
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def constraint_class(kind): """ The convention is that name of the class implementing the constraint has a simple relationship to the constraint kind, namely that a constraint whose kind is 'this_kind' is implemented by a class called ThisKindConstraint. So: ``min`` --> ``MinConst...
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import os import re def get_snr(ppath, name): """ read and return sampling rate (SR) from file $ppath/$name/info.txt """ fid = open(os.path.join(ppath, name, 'info.txt'), newline=None) lines = fid.readlines() fid.close() values = [] for l in lines : a = re.search("^" + 'SR' + ...
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def coerce_int(obj): """Return string converted to integer. .. Usage:: >>> coerce_int(49) 49 >>> coerce_int('49') 49 >>> coerce_int(43.22) 43 """ try: return int(obj) if obj else obj except ValueError: return 0
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def taux_boost(cote, boost_selon_cote=True, boost=1): """ Calcul du taux de boost pour promotion Betclic """ if not boost_selon_cote: return boost if cote < 2: return 0 if cote < 2.51: return 0.25 if cote < 3.51: return 0.5 return 1
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import argparse def parse_arguments(): """ Parse user arguments Output: list with all the user arguments """ # All the docstrings are very provisional and some of them are old, they would be changed in further steps!! parser = argparse.ArgumentParser(description="""""") ...
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def cal_outlet_year(df): """ Calculating the Outlet Year """ #Years: df['Outlet_Years'] = 2013 - df['Outlet_Establishment_Year'] return df
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def part1(entries: dict) -> int: """part1 solver""" mem = dict() mask_set0s = 0 mask_set1s = 0 for entry in entries: if entry['type'] == 'mask': mask = entry['value'] mask_set0s = int(mask.replace('X', '1'), 2) mask_set1s = int(mask.replace('X', '0'), 2) ...
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from typing import Tuple from typing import Optional def split_module(path: str) -> Tuple[Optional[str], Optional[str]]: """Split module and system path.""" if not path.startswith('@'): return None, path index = path.find('/') if index == -1: return path[1:], None else: re...
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import itertools def vertex_color_qubo(G, colors): """Return the QUBO with ground states corresponding to a vertex coloring. If `V` is the set of nodes, `E` is the set of edges and `C` is the set of colors the resulting qubo will have: * :math:`|V|*|C|` variables/nodes * :math:`|V|*|C|*(|C| - 1)...
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import copy def swap_ele(mat, pos1, pos2): """ Definition --- Method to swap elements of a node from pos1 to pos2 Parameters --- mat : Node of which the elements are to be swapped pos1, pos2: Positions of the elements to be swapped Returns --- mat1 : New node after swappi...
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def expand(pos, s, offset=False): """find a palindrome by expanding around the center >>> expand(1, 'abc') 'b' >>> expand(1, 'aaa') 'aaa' >>> expand(0, 'bb', True) 'bb' """ if offset: # shift right pos by 1 right = pos + 1 left = pos else: left = right =...
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def get_user_conhap_json_list(user_conhaps): """ Make json objects of the user conhaps and add them to a list. :param user_conhaps: conhap :return: """ conhaps = [] for user_conhap in user_conhaps: conhaps.append(user_conhap.json()) return conhaps
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