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def formatters(m) -> str: """One or more text formatters, as a space-separated string.""" if hasattr(m, "standalone_formatters"): return m.standalone_formatters else: return " ".join(m.chainable_formatters_list)
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import aiohttp def get_session(limit=100, ttl_dns_cache=10, use_dns_cache=True, loop=None) -> aiohttp.ClientSession: """ https://docs.aiohttp.org/en/stable/client_reference.html :return: properly configured tcp/http session with - asyncronous dns resolving enabled - dns cache enabled with proper t...
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import operator def function_factory(given_operator, immediate_A=False, immediate_B=False): """ Generates a function for the given operator and a boolean indicating which inputs to consider as immediate or from register """ def f(register, A, B, C): result = register.copy() # Read...
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import sys import os def get_maven_user_dir(): """ Return the path to the user's .m2 directory. Create the directory if it does not already exist. Returns: The path to the user's .m2 directory. """ if sys.platform == 'cygwin': user_dir = cygpath_to_unix(os.enviro...
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def empty_prep_nb(context, *args): """Preparation function that forwards received arguments down the stack.""" return args
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def subproc_env(d): """Set environment variables for the @insubprocess decorator""" def decorator(f): f.subproc_env = d return f return decorator
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def inverses(k): """ calculates the inverses of each number in k space """ inverse_numbers = dict() for i in range(k): if i in inverse_numbers: continue for j in range(i, k): if (i * j) % k == 1: inverse_numbers[i] = j inverse_numbers[j...
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def outline(text: str, outline_clr=[10,10,10], text_clr=[250,250,250]) -> str: """ Creates a colored outline around the given text. Requires the "contour" package in the preamble, preferably with the [outline] option. That is: \usepackage[outline]{contour} Currently, this package is not included by de...
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def fetch_licenses(fw_conn): """Fetch Licenses Args: fw_conn (PanDevice): A panos object for device """ try: fw_conn.fetch_licenses_from_license_server() print('Licenses retrieved from Palo Alto Networks') return True except: print('WARNING: Not able to retri...
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import re def squashed(s): """Remove all of the whitespace from s.""" return re.sub(r"\s", "", s)
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def add_two(num): """Add two to num""" return num + 2
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from pathlib import Path import pkg_resources def get_path_of_data_dir() -> Path: """ get the path of the package data directory :returns: """ file_path: str = pkg_resources.resource_filename( "{{ cookiecutter.project_slug }}", "data") return Path(file_path)
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def get_ref_db_versions(ir_json_v6): """ This returns a dictionary that can be submitted for the referenceDatabasesVersions field of clinical report When closing a case through the interpretation portal, only the genomeAssembly is included in this dictionary This function will pull out the genomeAssembl...
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def m_max_flight_class(seq): """ 一年内飞机出行中最多机舱类型 :param seq: [商务舱乘机次数、公务舱乘机次数、经济舱乘机次数] :return: 乘机次数==0 返回0 乘坐商务舱最多 返回business_class 乘坐公务舱最多 executive_class 乘坐经济舱最多 返回tourist_class example: :seq [2, 2, 3] :return tourist_class """ temp_in...
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import argparse from pathlib import Path def _get_parser(): """Set up argument parser for scripts.""" DESC = """ BIDS conversion and anonymization. This workflow (1) runs heudiconv to convert dicoms to nifti BIDS format, (2) defaces anatomical scans, (3) completes relevant metadata in the dat...
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def _DictToString(dictionary): """Convert a dictionary to a space separated 'key=value' string. Args: dictionary: the key-value dictionary to be convert Returns: a string representing the dictionary """ dict_str = ' '.join(' {key}={value}'.format(key=key, value=value) for key, ...
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import os def cloud_init_installed(): """Verify cloud-init installed""" if os.path.exists('/etc/cloud/cloud.cfg'): return True return False
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def validate_rages(ranges): """ Validates if weight ranges are feasible :param ranges: dict { "assignment_name": [minimum_percentage, maximum_percentage] } :return: True if its feasible else False """ min_possible = 0 max_possible = 0 for assignment, range_item in rang...
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def inverse(m): """Return matrix inverse. @param m: matrix @rtype:matrix """ return m.inverse()
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def getAddrPort(host): """The host address may be entered in the format <address>:<port> Return a tuple with host and port""" elems = host.split(":") if len(elems) > 1: host = elems[0] port = int(elems[1]) else: port = 22 return [host, port]
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def join_url(url, *paths): """ Joins individual URL strings together, and returns a single string. Usage:: >>> util.join_url("example.com", "index.html") 'example.com/index.html' """ to_rstrip = [url] + list(paths[:-1]) parts = [path.rstrip('/') for path in to_rstrip] + [paths[...
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import platform import sys import struct import os import logging def get_sys_info(): """ 平台基本信息收集 eg: [('python', '3.6.0.final.0'), ('python-bits', 64), ('OS', 'Darwin'), ('OS-release', '15.6.0'), ('machine', 'x86_64'), ...
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def create_edges(dc): """ Create edges (lines) connecting each pair of stars Arguments --------- dc : dictionary of constellations Returns ------- edges : list of all edges """ edges = [] for k,v in dc.items(): for i in v: edges.append(i) ...
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from typing import Union from typing import List def get_verbalization_ids(word: str, tokenizer, force_single_token: bool) -> Union[int, List[int]]: """ Get the token ids corresponding to a verbalization :param word: the verbalization :param tokenizer: the tokenizer to use :param force_single_tok...
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def _create_message(problems: list, meta: dict) -> dict: """ Create Message to be sent """ HELLO_MESSAGE_TEMPLATE = 'Hi ! I hope you are doing well :) \nHere is some stuff you can do on your website to improve the performance of the *{} page* of *{}*: ' problems_formatted = ['*' + problem['rule'] + ...
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import re def normalize_reference(s): """ Normalize reference label: collapse internal whitespace to single space, remove leading/trailing whitespace, case fold. """ return re.sub(r'\s+', ' ', s.strip()).upper()
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import json import re def generate_suppression(filepath: str) -> str: """Generate an example suppression document for the given file.""" return json.dumps( { "include": [], "ignore": [ { "pattern": f"{re.escape(filepath)}$", ...
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def token_to_bow(token, uniques): """ Returns the BoW representation of a NER token. """ vector = [-1]*len(uniques) for i in range(len(uniques)): if token != '' and token != 'nan' and uniques[i] in token: vector[i] = 1 return vector
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def update_bathrooms_slider(area): """ Update bathrooms slider to sensible values. """ return [1, min(int(area / 40) + 1, 5)]
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def _clean_qp(query_params): """ Strip 'event.' prefix from all query params. :rtype : QueryDict :param query_params: dict self.request.query_params :return: QueryDict query_params """ query_params = query_params.copy() # do not alter original dict nspace = 'event.' for key in query...
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import os import shutil def create_star_tmp(tmp_path:str, tmp_name:str='STAR'): """ Ensure the specified directory is ready for use as the temp directory for STAR. In particular, it ensures that tmp_path exists and that tmp_path/tmp_name does not exist (so STAR can create it). N.B. This fun...
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from pathlib import Path def extend_path(path: Path, extension: str) -> Path: """Extends a path by adding an extension to the stem. Args: path (Path): Full path. extension (str): Extension to add. This will replace the current extension. Returns: Path: New path with extension. ...
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import subprocess def get_gpu_memory(): """Get the memory of the GPUs in the system Examples: >>> get_gpu_memory() ['8123 MiB', '8123 MiB', '8123 MiB', '8123 MiB'] """ try: out_str = subprocess.run(["nvidia-smi", "--query-gpu=memory.total", "--format=csv"], stdout=subprocess.P...
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def get_html(html: str): """Convert HTML so it can be rendered.""" WRAPPER = """<div style="overflow-x: auto; border: 1px solid #e6e9ef; border-radius: 0.25rem; padding: 1rem; margin-bottom: 2.5rem">{}</div>""" # Newlines seem to mess with the rendering html = html.replace("\n", " ") return WRAPPER....
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def _insert_idxs(feature_centre, feature_size, dimensions): """Returns the indices of where to put the signal into the signal volume Parameters ---------- feature_centre : list, int List of coordinates for the centre location of the signal feature_size : list, int How big is the s...
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def get_user_nick(user): """Returns the nickname of the passed user, the name otherwise""" if user.nick is None: return user.name return user.nick
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def xdist_molar(xdist_mass, Massl, Massh): """ Calculates the molar concetration distilliat of liquid. Parameters ---------- xdist_mass : float The mass concetration distilliat of liquid, [kg/kg] Massl : float The molar mass of low-boilling component, [kg/kmol] Massh : float ...
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def dimensionality(self): """Unit's dimensionality (e.g. {length: 1, time: -1}) This is a simplified version of this method that does no caching. returns: dimensionality """ dim = self._REGISTRY._get_dimensionality(self._units) return dim
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import math def get_padding_elem(L_in: int, stride: int, kernel_size: int, dilation: int): """This function computes the number of elements to add for zero-padding. Arguments --------- L_in : int stride: int kernel_size : int dilation : int """ if stride > 1: n_steps = mat...
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def calc_pct_reliability(df_pct): """ Calculates percent reliability of interstate and non-interstate network. Args: df_pct, a pandas dataframe. Returns: int_rel_pct, % interstate reliability. non_int_rel_pct, % non interstate reliability. """ # Auto, Bus interstate df_int = d...
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def get_corr(d): """ Calculate correlation between SibSp and Parch :param d: data frame :return: rounded correlation """ return round(d.filter(items=['SibSp', 'Parch']).corr(method='pearson'), 2)
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def _remove_invalid_char(s): """Remove invalid and dangerous characters from a string.""" s = ''.join([i if ord(i) >= 32 and ord(i) < 127 else '' for i in s]) s = s.translate(dict.fromkeys(map(ord, "_%~#\\{}\":$"))) return s
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def get_diagnosis(driver): """ Selects result diagnosis """ return driver.find_elements_by_css_selector("#List11 option")
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def lengthOfLongestSubstring(self, s: str) -> int: """ s1 = "abcabc" s2 = 'dvdf' s3 = 'bbbbb' s4 = 'pwwkew' sb = lengthOfLongestSubstring("", s4) print(sb) """ pos = 0 maxlen = 0 curlen = 0 for i in range(len(s)): """ a b c a b c ...
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def add_charge(line, charge): """ Add information on the charge to the output lines """ new_line = "{} {} {}".format(" ".join(line.split()[:3]), charge, " ".join(line.split()[3:])) return new_line
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import json import os def load_hrv_keys_json(): """Loads the content of the 'hrv_keys.json' file found in the 'pyhrv/files/' directory. Returns ------- hrv_keys : dict Content of the pyhrv/files/hrv_keys.json file in a dictionary """ return json.load(open(os.path.join(os.path.split(__file__)[0], './files/hrv...
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def is_prime(n): """See if a number is a prime number.""" for i in range(2, int(n**0.5) + 1): if not n % i: return False return True
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import argparse def create_parser(): """ parse the input parameters :return dict: parameters """ # SEE: https://docs.python.org/3/library/argparse.html parser = argparse.ArgumentParser() parser.add_argument( '-e', '--path_experiment', type=str, required=True, help='path to the experime...
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def _doMatchExcept1(inv, atoms): """ Helper function to check if two atoms in the list are the same, and one not Note: Works only for three atoms Arguments: - inv: atom invariants (used to define equivalence of atoms) - atoms: list of atoms to check Return: atom that i...
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import uuid def case_generator(uuid_val=None): """ ---- examples: 1) case_generator('a55eff11-ed51-ecb37-ccba') -> 'A55EFF11ED' ---- Use uuid to create test-case unique name :return: """ uuid_val = uuid_val if uuid_val is not None else str(uuid.uuid4()) return str(uuid_val).upp...
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import typing def unpack_key_value_pair(entry) -> typing.Tuple[object, object]: """ensure the given entry can be unpacked into a key/value pair :param entry: an iterable element with exactly two elements :return: a tuple containing the key value pair :raises: ValueError when the entry can't be unpack...
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import os def exec_mariadb_stat2(query, db, filename=None, verbose=True): """Query MariaDB.""" cmd = 'mysql --host analytics-slave.eqiad.wmnet {0} -e "{1}"'.format(db, query) if filename: cmd = cmd + " > " + filename if verbose: print(cmd) ret = os.system(cmd) return ret
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import shlex import subprocess def valid_system_python(): """ :return: full path of python executable if a python at /usr/bin/python3 or /usr/bin/python is available that is version 3.4 or newer, else None if not found """ cmd = "import platform; v = platform.python_version_tuple(); "\ ...
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def value_if_found_else_key(some_dict, key): """Lookup a value in some_dict and use the key itself as fallback""" return some_dict.get(key, key)
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def unitstep(t): """Returns the unit step function: ``u(t) = 1.0 if t>=0 else 0``""" return 1.0 if t >= 0 else 0.0
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def getRowMarker(f, year): """ Get the row marker for given year (where the most recent update left off) and return. Returns 0 if doesn't exist. """ dset = f['data'] marker = 0 if "_row_marker" in dset.attrs: row_marker = dset.attrs["_row_marker"] # returns [year, row] ...
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def list_to_csv(wlist, outfile): """ Writes Python list of lists, tuples, or characters to csv file, one element per row """ if isinstance(wlist[0],list) or isinstance(wlist[1],tuple): wlist = [(',').join([str(el) for el in r]) for r in wlist] else: wlist = [str(el) for el in...
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def strokes_to_lines(strokes): """Convert stroke-3 format to polyline format.""" x = 0 y = 0 lines = [] line = [] for i in range(len(strokes)): if strokes[i, 2] == 1: x += float(strokes[i, 0]) y += float(strokes[i, 1]) line.append([x, y]) l...
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def report(securify_target_output): """Report findings. """ return 0
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def prepare_parameters(model, optim_args): """Produce two groups of parameters: - the pretrained parameters (PlacesCNN, ResNet50), and - the other parameters (not pretrained) This allows us to set the lr of the two groups separately (other params as the lr given as input, pretrained params a...
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def calculate_measureland_qualifier_flag_overall(row): """Calculate the overall data quality flag taking into account the others that have been assigned.""" mqf_tuple = (row['measureland_qualifier_flag_speed'], row['measureland_qualifier_flag_distance'], row['measureland_quali...
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def convert_paypal_row(row): """ >>> convert_paypal_row(['02/11/2015', '03:06:30', 'GMT', 'Name', 'Type', 'Status', 'GBP', '-7.3', 'Reciept ID', '0.00']) ['02/11/2015', '-7.30', 'Name'] >>> convert_paypal_row(['02/11/2015', '03:06:30', 'GMT', 'currency conversion', 'Type', 'Status', 'USD', '-7.3', 'Reci...
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def df_uniques(df): """Find unique values for each dataframe columns""" result = {} for x in df.columns: result[df[x].name] = df[x].unique().tolist()[0:5] return result
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def __chr_hex(c): """xx""" return str(hex(ord(c)))
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def fake_func_has_metadata(testcase, resource_name): """ Fake the behaviour of ‘pkg_resources.Distribution.has_metadata’. """ if ( resource_name != testcase.version_info_filename or not hasattr(testcase, 'test_version_info')): return False return True
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def uncomposekey(prefix, key): """Remove a prefix from a composite key. Example: uncomposekey("attr1.attr2", "attr1.attr2.attr3.attr4") == "attr3.attr4" """ if " " in prefix or " " in key: raise NotImplementedError() prefix, key = prefix.split("."), key.split(".") while prefix: a, b = prefix.pop(0)...
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def fw_action(raw): """Normalize firewall action Gives back a value between allow, deny, reject and other """ lower = raw.lower() if lower in ['allow', 'deny', 'reject']: return lower return 'other'
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def memoize(function): """ Simple memoization. This assumes all arguments implement a.tostring() function. This holds for numpy arrays. """ memo = {} def new_function(*args, **kwargs): try: return memo[tuple([x.tostring() for x in args])] except KeyError: ...
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import torch def split_tensor_pos(tensor): """ Splits tensor into positive and negative terms """ zeros_like = torch.zeros_like(tensor) pos_tensor = torch.max(tensor, zeros_like) neg_tensor = torch.min(tensor, zeros_like) return pos_tensor, neg_tensor
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import random def randomly_true(probability: float) -> float: """ Return True with a given probability, False otherwise. """ return random.uniform(0,1) < probability
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import subprocess def run_cmd_captured(cmd: list[str]): """Run a command, echoing it to stdout, capturing command output and returning it""" print(f"[CMD] {' '.join(cmd)}") res = subprocess.run(cmd, capture_output=True) return res.stdout
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import os def _is_inverse_label_transform(): """Returns True if if it's running in inverse label transform.""" return os.getenv('TRANSFORM_MODE') == 'inverse-label-transform'
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def lrange(): """Lesion indices.""" return range(1, 5)
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def GetMetaClass(mc): """ Shows info about a given OSSymbol """ out_string = "{0: <5d}x {1: >5d} bytes {2:s}\n".format(mc.instanceCount, mc.classSize, mc.className.string) return out_string
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import random def __choose_state(state_map): """ Choose the next state randomly """ choice = random.random() probability_reached = 0 for state, probability in state_map.items(): probability_reached += probability if probability_reached > choice: return state ret...
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def numeric_filter(operation, value, column, df): """Filters a data column numerically. Arguments: operation: Operator used to filter data (e.g. ">", "<", "==", ">=", "<=", "!=") value: Operand column: String for column name df: DataFrame Returns: Boolean column that indicates whether each...
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import os def skip(*filenames): """ Detects if the data preparation has been already done. If the preparation has been done, we can skip it. Returns ------- bool if True, the preparation phase can be skipped. if False, it must be done. """ for filename in filenames: ...
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def webpage_attribute_setter(attr): """ Helper function for defining setters for web_page attributes, e.g. ``set_foo_enabled = webpage_attribute_setter("foo")`` sets a value of ``webpage.foo`` attribute. """ def _setter(self, value): setattr(self.web_page, attr, value) return _setter
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def meanOffNadirViewAngle(xmlroot): """Get the mean off nadir view angle from the xml.""" return float(xmlroot.find('IMD/IMAGE/MEANOFFNADIRVIEWANGLE').text)
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def no_none(decorated): """decorator for a generator to discard/filter-out None values""" def _func(*args, **kwargs): """wrap generator""" for value in decorated(*args, **kwargs): if value is not None: yield value return _func
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def truesi(xs): """ indices for which x[i] is True """ return [i for i, x in enumerate(xs) if x]
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def create_event(event_type, data): """Return a dictionary containing the properties required when defining an event. Keyword arguments: event_type -- the type of event, used to distinguish multiple events apart. data -- a dictionary of key/value pairs containing custom data. """ return { ...
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def normalize_port_no(port_no): """Normalize port number value to int or string.""" if isinstance(port_no, int): return port_no if isinstance(port_no, str): try: # Convert decimal and hexadecimal port number strings. return int(port_no, 0) except ValueError: ...
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def resize_bbox(bbox, in_size, out_size): """ Resize bounding boxes according to image resize. :param bbox (numpy.ndarray): An array that has a shape (R, 4), 'R' is the number of the bounding boxes. '4' indicates the position of the box, which represents (y_min, x_min, y_max, x_max) ...
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import torch def cosine_dist(x, y): """ Compute consin dist Input: x: embedding of size M x D y: embedding of size N x D Output: dist: pairwise distance of size M x N """ xy = x.mm(y.t()) x_norm = torch.norm(x, p=2, dim=1, keepdim=True) y_norm = torch.norm(y, p=2,...
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def override(interface_class): """ Method to implement Java-like derived class method override annotation. Courtesy of mkorpela's answer at http://stackoverflow.com/questions/1167617/in-python-how-do-i-indicate-im-overriding-a-method """ def override(method): assert (method.__name__ in ...
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def _add_suffix(params, model): """ Add suffixes to a list of parameters. Suffixes includes derivatives, power2 and full """ params_full = params.copy() suffix = { "basic": {}, "derivatives": {"derivative1"}, "power2": {"power2"}, "full": {"derivative1", "power2",...
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import re def clean_tweets(s): """Lowercase and remove punctuation from a pd.Series object containing text. Args: data (pd.Series-like): a series containing text""" result = s.apply(str.lower) punct_re = r'[^a-zA-Z0-9\s]' result = [re.sub(pattern=punct_re, repl=' ', string=i) for i in...
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def attribute(property, *args, **kwargs): """Methodcaller, attrgetter logic.""" def attribute(object): """Return an attrgetter or methodcaller.""" object = getattr(object, property) return object(*args, **kwargs) if args or kwargs or callable(object) else object return attribute
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def strip_spaces_list(list_in, strip_method="all"): """ Remove spaces from all items in a list :param list_in: :param strip_method: Default: 'all' for leading and trailing spaces. Can also be 'leading' or 'trailing' :return: List with items stripped of spaces """ if strip_method == "all...
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import os def describe_os(*paths): """Read the Operating System Description from `os-release` This creates a string describing the running operating-system name and version. It reads the information from the path array provided as `paths`. The first available file takes precedence. It must be formatt...
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def LinearReconstruct( u_stencil ): """Linear reconstruction with linear weights. This reconstructs u_{i+1/2} given cell averages \\bar{u}_i at each neighboring location. See (2.14) in `High Order Weighted Essentially Nonoscillatory Schemes for Convection Dominated Problems'. """ uim2, u...
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def compute_avg_wmd_distance(contexts1, contexts2, gensim_obj): """ Compute an average word metric distance :param contexts1: List of ContextAndEntities objects extracted from Document 1 :param contexts2: List of ContextAndEntities objects extracted from Document 2 :param gensim_obj: a Gensim object...
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import re def clean_emojis(line): """Escape custom emojis.""" return re.sub(r"<(a)?:([a-zA-Z0-9_]+):([0-9]+)>", "<\u200b\\1:\\2:\\3>", line)
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def reaction_has_internal_standard(message): """Whether any reaction component uses the internal standard role.""" for reaction_input in message.inputs.values(): for compound in reaction_input.components: if (compound.reaction_role == compound.ReactionRole.INTERNAL_STANDA...
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from typing import Dict import torch def default_fn(x, models, **kwargs) -> Dict[str, torch.Tensor]: """ The default inference function for [BaseAdapter][pytorch_adapt.adapters.BaseAdapter]. """ features = models["G"](x) logits = models["C"](features) return {"features": features, "logits": lo...
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def get_indented_block(prefix_lines): """Returns an integer. The return value is the number of lines that belong to block begun on the first line. Parameters ---------- prefix_lines : list of basestring pairs Each pair corresponds to a line of SHPAML source code. The first e...
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def get_image_id(s,v,i): """ image_id = XX(set)XXX(vid)XXXXX(image) """ return s*(10**8)+v*(10**5)+i
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def merge_dico_in_first(d1, d2): """ Merge dictionary d2 in d1. """ for k, v in d2.items(): if k in d1: raise ValueError(f"Key {k} should not be in d1") else: d1[k] = v return d1
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import torch def collate_fn_long_range(batch): """ Puts each data field into a tensor with outer dimension batch size :param batch: :return: """ pos, out_input, out_label = zip(*batch) out_input = torch.stack(out_input, 0) out_label = torch.stack(out_label, 0) return pos
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