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def lifetime_init(rule='1/e'): """Initialize a lifetime object. Parameters ---------- rule : str {'1/e', 'trapz', 'simpson'}, optional Name of the method to integrate the correlation curve. \n '1/e' uses the 1/e rule and assumes an exponential decay. It linearly interpolates the...
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import operator def get_key_tag(soup, top_result): """Finds the nth most popular tag on a webpage. Args: soup: A Beautiful Soup object of the target's EX-21 document (i.e.: subsidiary information). top_result: The nth most popular tag to find. Returns: Returns the tag...
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import string import random def random_string(lenght: int = 10) -> str: """Generate a random string composed of lower cased ascii characters Args: lenght (int, optional): lenght of the string to generate. Defaults to 10. Returns: str: random string of lenght `lenght` composed of lower ca...
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def generatetfmatrix(matrix, idf): """ Generate a new term weight matrix when supplied with the current `matrix` and the weighing factors `idf`. Returns a new matrix using lists. """ docamount = len(matrix[0]) # get the amount of documents wordcount = len(matrix) updatedmatrix = list() # c...
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def encrypt(text, public_key): """function used for encryption""" key, n = public_key ciphertext = [pow(ord(char), key, n) for char in text] return ciphertext
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import os def file_relative_path(dunderfile, relative_path): """ This function is useful when one needs to load a file that is relative to the position of the current file. (Such as when you encode a configuration file path in source file and want in runnable in any current working directory) ...
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def dadras(XYZ, t, p=3, s=2.7, r=1.7, c=2, e=9): """ The Dadras Attractor. x0 = (0.1,0.03,0) """ x, y, z = XYZ x_dt = y - p * x + s * y * z y_dt = r * y - x * z + z z_dt = c * x * y - e * z return x_dt, y_dt, z_dt
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def parse_column_names(df): """ Method used to parse the column names :param df: Original data frame :type df: pd.DataFrame :return: pd.DataFrame -- Formatted data frame """ cols = set(df.columns.tolist()) if "StreamID" in cols: df.rename(columns={"StreamID": "stream_id"}, inpl...
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def layer_uid(use_spatial_hash, spatial_hash_cell_size): """ create a number that will always be unique for a spritelist with the given properties. """ uid = spatial_hash_cell_size << use_spatial_hash return uid
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def find_containerName_by_containerId(containers_list, container_id): """ Function to get containername based on container ID. Parameters ---------- containers_list : list Containers list extracted from CVP. container_id : string ID of the container to search Returns --...
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def distance_from_speed_and_time(movement_speed, movement_time): """Returns distance from speed and time""" return movement_time * movement_speed * 1000 / 3600
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from pathlib import Path def get_image_paths(image_folder: Path) -> list: """ Get all images in image folder ending in .jpg or .png """ suffix_set = {'.jpg', '.png'} return [ image for image in image_folder.iterdir() if image.suffix in suffix_set ]
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def personal_top_three(scores): """ Return top three score from the list. if there are less than 3 scores then return in a decending order the all elements """ # sorted the list in a decending order sorted_scores = sorted(scores, reverse=True) # check if there are at least 3 elements...
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import math def ceil(num: int) -> float: """ Ceil a specific number """ return math.ceil(num)
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import toml def _return_toml(toml_path): """return config files loaded into dicts with toml library used to test functions that parse config sections, taking these dicts as inputs""" with toml_path.open("r") as fp: config_toml = toml.load(fp) return config_toml
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def lines( *, base_width=0.5, line_base_ratio=2.0, tick_major_base_ratio=1.0, tick_minor_base_ratio=0.5, tick_size_width_ratio=3.0, tick_major_size_min=3.0, tick_minor_size_min=2.0, axisbelow=True, ): """Adjust linewidth(s) according to a base width.""" tick_major_width = ti...
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def stack_template_key_name(blueprint): """Given a blueprint, produce an appropriate key name. Args: blueprint (:class:`stacker.blueprints.base.Blueprint`): The blueprint object to create the key from. Returns: string: Key name resulting from blueprint. """ name = bluep...
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def _read_titles(fn): """ Read titles from file """ with open(fn) as f: return [line.strip().replace(r'\n', '\n') for line in f]
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def _set_log_format(color: bool, include_caller: bool) -> str: """ Set log format :param color: Log message is colored :param include_caller: At the end, put a [caller:line-of-code], e.g. [script:123] :return: string of log format """ level_name = "* %(levelname)1s" time = "%(asctime)s,%...
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import torch def calc_emd_loss(pred, target): """calculate emd loss. Args: pred (Tensor): of shape (N, C, H, W). Predicted tensor. target (Tensor): of shape (N, C, H, W). Ground truth tensor. """ b, _, h, w = pred.shape pred = pred.reshape([b, -1, w * h]) pred_norm = torch.sqrt...
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def format_sort_key(sort_key): """ format sort key (list of integers) with | level boundaries >>> str(format_sort_key([1, 0, 65535])) '0001 | FFFF' """ return " ".join( ("{:04X}".format(x) if x else "|") for x in sort_key )
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def get_lcps(yaml, interfaces=True, loopbacks=True, bridgedomains=True): """Returns a list of LCPs configured in the system. Optionally (de)select the different types of LCP. Return an empty list if there are none of the given type(s).""" ret = [] if interfaces and "interfaces" in yaml: for _if...
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def bitceil(N): """ Find the bit (i.e. power of 2) immediately greater than or equal to N Note: this works for numbers up to 2 ** 64. Roughly equivalent to int(2 ** np.ceil(np.log2(N))) """ # Note: for Python 2.7 and 3.x, this is faster: # return 1 << int(N - 1).bit_length() N = int(N) ...
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import numpy as np def sph_dist(a1, d1, a2, d2): """Calculate spherical distance between two sky positions. Uses the haversine formula so accuracy degrades at distances near 180 degrees. The input coordinates can be either native python types (float, int) or numpy arrays. The output will matchin th...
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def dos_list_request_to_indexd(dos_list): """ Takes a DOS ListDataObjects request and converts it into a request against indexd index. :param gdc: :return: """ mreq = {} mreq['limit'] = dos_list.get('page_size', None) mreq['start'] = dos_list.get('page_token', None) return mreq
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def append_descriptor(descriptor, desc_new): """ appends a descriptor to an existing one Args: descriptor(dict): the descriptor dictionary, with list-like values desc_new(dict): the descriptor dictionary to append Returns: descriptor(dict): the longer descriptor """ fo...
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def _loop_action_in_command_line(command_line: str) -> bool: """Does the command line contain a loop statement Args: command_line (str): The command line to test. Returns: bool: True if there's a loop in this command line. """ return any( word in command_line.split() for wo...
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def validate(attrs): """ No-op function which will validate the client-side data. Werkzeug will throw an exception if you try to access an attribute that does not have a key for a MultiDict. """ try: #required_attributes = ('qquuid', 'qqfilename') #[attrs.get(k) for k,v in attrs.item...
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from datetime import datetime def format_date( date: datetime, base: datetime = datetime.now(), all_day: bool = False ) -> str: """Convert dates to a specified format Arguments: <date>: The date to format [base]: When the date or time matches the info from base, it will be skipped. This helps avoid repeated i...
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def private_base_url_and_expected_port(private_base_url, request): """ Returns the upstream api url to be used, along with the port that is expected """ url = private_base_url(request.param) port = url.split(":")[2].replace('/', '') return url, port if port not in {'80', '443'} else None
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import torch def compute_accuracy(idxR, idx, k, device="cpu"): """ ================================= \n #----- INPUT \n idxR : (Tensor) real labels \n idx : (Tensor) estimated labels \n k : (Scalar) numbe...
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def replace(source_files): """Utility function to replace empty files list""" replace_files = list(source_files) for o in replace_files: o.name = o.name[:-1] + '0' o.index = (o.index[0], 0) o.out_index = None o.in_index = None # Set a vacuous data list replace_data =...
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def create_switch(cfmclient, data, fabric_type=None): """ Create a Composable Fabric switch. """ params = {'type': fabric_type} if fabric_type else None return cfmclient.post('v1/switches', params, data).json().get('result')
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import hmac import hashlib import base64 def authenticate(request, channel_secret): """Validates the incoming HTTP requests. Args: request (flask.Request): HTTP request object. channel_secret (str): channel secret got from LINE developer console. Returns: bool: true when ...
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import base64 def string_to_base64(string): """ Encodes a string in base64 (> str) """ string_bytes = string.encode('ascii') base64_encoded = base64.b64encode(string_bytes) base64string = base64_encoded.decode('ascii') return base64string
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def resolve_xpath_to_element(*names): """ Resolves the objects from the context (which are supposed to be XPath expressions) referenced by ``names`` with the *one* element that the XPaths yield or ``None``. This is useful when a copied tree is processed and 'XPath pointers' are passe...
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import re def get_vcpus_per_osd_from_ironic(ironic, tripleo_environment_parameters, num_osds): """ Dynamically sets the vCPU to OSD ratio based the OSD type to: HDD | OSDs per device: 1 | vCPUs per device: 1 SSD | OSDs per device: 1 | vCPUs per device: 4 NVMe | OSDs per device: 4 | vCPUs p...
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def power(base, exp): """Finding the power""" assert exp >=0 and int(exp) == exp, 'The exponential must be positive integers only' if exp == 0: return 1 if exp == 1: return base return base * power(base, exp-1)
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def gimmepi(): """ returns pi """ return 3.141592653589793
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import os def out_of_date(extensions): """ Check whether any pyx source is newer than the corresponding generated C source or whether any C source is missing. """ for extension in extensions: for pyx in extension.sources: path, ext = os.path.splitext(pyx) if ext not in ('.pyx', '.py'): continue cs...
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def get_uce_num(header): """use own function vs. import from match_contigs_to_probes - we don't want lowercase""" return header.lstrip('>').split(' ')[0].split('_')[1]
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import os def project_info(result): """Get toplevel dir, project_slug, and project dir from baked cookies""" project_path = str(result.project) project_slug = os.path.split(project_path)[-1] project_dir = os.path.join(project_path, project_slug) return project_path, project_slug, project_dir
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from typing import Tuple from typing import List def sort_read_groups(read_groups_string: str) -> Tuple[List[str], List[str]]: """Reorder the argument to the STAR `--outSAMattrRGline` parameter. The sort line could be substituted by using the `sorted()` method on both lists, since what's being sorted on ...
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import numpy def smooth_profile(xh, ak, xa): """Calculated smoothed profile. Calculate a smoothed profile following Rodgers and Connor (2003). :param xh: High-resolution profile :param ak: Low-resolution averaging kernel [VMR] :param xa: Low-resolution a priori profile """ OK = (numpy.i...
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import torch def create_pinhole(fx, fy, cx, cy, height, width, rx, ry, rz, tx, ty, tz): """Creates pinhole model encoded to a torch.Tensor. """ return torch.Tensor([ [fx, fy, cx, cy, height, width, rx, ry, rz, tx, ty, tz]])
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def _universal_binary_test_transition(_settings, attr): """Implementation of the universal_binary_test_transition transition.""" return { "//command_line_option:cpu": attr.cpu, }
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def need_elem(glyph): """ Finds RGlyph object that needs elem attribute. """ return not glyph.name.startswith('uni') and glyph.name.endswith('V')
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import base64 def _posh_encode(command): """Encode a powershell command to base64. This is using utf-16 encoding and disregarding the first two bytes :param command: command to encode """ return base64.b64encode(command.encode('utf-16')[2:])
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import six def _convert_str(data, to_binary=False): """Helper to convert str to corresponding string or binary type. `data` has `str` type (in both Python 2/3), the function converts it to corresponding string or binary representation depending on Python version and boolean `to_binary` parameter. ...
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import re def _is_valid_import(source_module, target_module, disallowed): """ Return whether an import is allowed. Parameters ---------- source_module : str Name of the module where the import statement is. target_module : str Name being imported. disallowed : str Regu...
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import os def package_is_installed(name, path): """Check if <name>.yaml exist in path. """ yaml_fn = os.path.join(path, name + '.yaml') return os.path.isfile(yaml_fn)
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import torch def extract_indices(seq, which_one): """ Helper method to extract the indices of elements which have the specified label. :param labels: (torch.tensor) Labels of the context set. :param which_class: Label for which indices are extracted. :return: (torch.tensor) Indices in the form of ...
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import random def decision(probability: float): """Function that gives you a decision based on a given probability :param probability: float between 0 and 1 :type: float :return: True or False :rtype: bool """ if random.random() < probability: print("You know what let's do it...") ...
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def create_events_blocks(events): """ Function to create list of events grouped by time. :param events: all (or available) elements of `DayStudyEvents` :type events: list :return: list of events grouped by time :rtype: list of list """ event_blocks = [] for i, event in enumerate(eve...
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import random def _point_in_vertices(pt, vertices): """**HELPER METHOD. DO NOT CALL.** Returns whether a point is contained in a polygon specified by a sequence of vertices. Parameters ---------- pt : libpysal.cg.Point A point. vertices : list A list of vertices representing a...
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def speed_ms_to_kmh(speed_ms): """Converts to m/s to km/h""" return speed_ms * 3.6
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import os def _getbaseDir(ctx, name=None): """ Returns an absolute path based on the given folder name: ".": directory that contains the current instance's the ensemble "src": directory of the source file this expression appears in "home" The "home" directory for the current instance (committed...
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from pathlib import Path def temp_directory(tmpdir): """Return path to temporary directory, and cleanup afterwards.""" return Path(tmpdir).resolve()
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import requests def get_jupyter_kernels(resource_url, user_token): """extracting information for each kernel on a Jupyter server""" sessions_url = f"{resource_url}api/sessions" headers = {"Authorization": f"token {user_token}"} response = requests.get(sessions_url, headers=headers) result = respon...
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def ipv6_mask_to_long(mask): """Convert an IPv6 prefixlen to long >>> ipv6_mask_to_long(64) 340282366920938463444927863358058659840L >>> ipv6_mask_to_long(128) 340282366920938463463374607431768211455L """ mask_binary = ("1" * mask) + ("0" * (128-mask)) return int(mask_binary, 2)
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def other_citations(): """ Other citations that should be included. A dict of strings :return: :rtype: """ return { 'conda-forge': """ conda-forge community. (2015). The conda-forge Project: Community-based Software Distribution Built on the conda Package Format and Ecosystem. Zenodo. htt...
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def generateOldLibraryEntry(data): """ Return a list of values used to save entries to the old-style RMG thermo database based on the thermodynamics object `data`. """ items = '{0:3d}'.format(data.symmetry) for lower, upper, degeneracy in data.frequencies: items += ' {0:3d} {1:9.1f} ...
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def check_index(active_array, item): """Check row and column index of 2d array""" for c in range(5): for r in range(5): if active_array[c][r] == item: return [c, r]
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def normalize_volume(audio, dBFS=-15): """Normalizes the volume of an audio clip. Normalizes the amplitude of and audio clip to match a specified value of decibels relative to full scale. Args: audio (pydub AudioSegment): The audio clip to be normalized. dBFS (int): the desired...
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def use_map(letters): """ >>> import string >>> list(use_map(string.ascii_letters)) # doctest: +ELLIPSIS [97, 98, 99, ..., 88, 89, 90] """ return map(ord, letters)
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def findMatching(device, device_arr): """ Check the array of devices to see if there is a matching element. Args: device (string): The name of the device attempting to be added. device_arr (array): An array of the devices attached to a profile. """ matches = [x for x in device_arr i...
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def R4(fZ, delta_P, delta_S): """ R4 Preload changes Fz (Section 5.4.2) Fz : Loss of preload due to embedding """ # Fz = fZ / (delta_P + delta_S) # (R4/1) # return Fz #
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import csv def read_random_seeds(): """Reads in the random seeds from a csv file and sorts them in ascending order.""" random_seeds = [] with open('./final.csv') as data_file: csvReader = csv.reader(data_file) for row in csvReader: random_seeds.append(int(row[0])) random_s...
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import os def is_modified(file_path, info): """.""" state = False mtime = os.path.getmtime(file_path) last_mtime = info.get(file_path) if mtime and mtime != last_mtime: state = True return state
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import re def sanitize_host(host): """ Removes extraneous characters from a hostname, leaves an IP untouched. """ if re.match(r'[a-zA-Z]', host): return host.split()[0].strip().replace('_', '-').replace('.', '') else: return host
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def convert_bounding_box(bb_from_get): """Convert bounding box specified by by {'low': (x_min, y_min, z_min), 'high': (x_max, y_max, z_max)} to {'xMin': x_min, 'yMin': y_min, ..., 'zMax': z_max} Input typically comes from Abaqus' function getBoundingBox. Output, bb_to_get_by, can be used in Abaqu...
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def get_labelled(df, X): """Add participant id column and remove special characters.""" X['participant_id'] = df.participant_id.astype(int) not_null = df.created_account.notnull() to_replace = ['?', '-', ' ', '(', ')', '&'] X.columns = X.columns.str.replace('?', 'unknown') for symb in to_replace...
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def _unwrap_decorator(func): """Return (filename, lineno) for the func the given func wraps. If the wrapped func cannot be identified then return None. Likewise for the wrapped filename. "lineno" is None if it cannot be found but the filename could. """ try: func = func.__closure__[0]...
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import re def cfgString2Dict(cfg_raw): """ Converts a string with configuration parameters separated by a space into a dictionary. ​ Parameters ---------- cfg_raw : str ​ Returns ------- dict """ return {key: value for key, _, value, _ in re.findall( r"(\w+\s?)(=\s?...
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def heart_rate_average(hr_list): """Averages posted heart rates of a patient Method curated by Braden Garrison The accepted heart rate list of a specific patient is iterated through to produce a total which is then divided by the list length to produce the heart rate average. Args: hr...
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def _insert_token_to_repo_url(url, token): """Insert the token to the Git repo url, to make a component of the git clone command. This method can only be called when repo_url is an https url. Args: url (str): Git repo url where the token should be inserted into. token (str): Token to be ins...
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def b58decode(string): """Takes a base58-encoded number and returns it in base10. :param string: the number to base58_decode (as str). :return: the number passed as first parameter, base10 encoded. """ alphabet = "123456789ABCDEFGHJKLMNPQRSTUVWXYZabcdefghijkmnopqrstuvwxyz" # Populating a dicti...
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def parse_inviscid_pressure(lines, line, i): """reads inviscid pressure (method=3)""" ncomponents = int(line[0:2]) # 0 : save component force data; use new Unit 9 # 1 : save component force data; use old Unit 9 # 2 : dont save force data ifsave = int(line[2:3]) unused_title = line[6:66].stri...
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def controller_delete(id): """ Thing Manager Data Handler for DELETE requests """ return 'delete'
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def indent(input_str, prefix): """ Given a multiline string, return it with every line prefixed by "prefix" """ return "\n".join([f"{prefix}{x}" for x in input_str.split("\n")])
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import re from typing import Dict def _parse_group(pr_txt: str, header_pattern: str, entry_regex: re.Pattern) -> Dict[str, int]: """General function to parse and extract a listing from the press release. Args: pr_txt: The text of the press release. header_pattern: A string rep...
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import uuid def create_boundary(prefix, compact=False): """Creates a string that can be used as a multipart request boundary. :param bool compact: :param str prefix: String to use as the start of the boundary string """ if compact: return prefix + str(uuid.uuid4())[:8] else: r...
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def check_lru(sc): """ Check LRU replacement of sim_cache. """ sc.reset() # Setup 5 addresses with different tags but in the same set address = [sc.merge_address(i, 0, 0) for i in range(5)] # Write different data to each address for i in range(5): sc.write(address[i], "1111", i + 1) ...
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def short_id(id64): """Given a 64-bit id, make a shorter 16-bit one.""" id16 = 0 for offset in range(0, 64, 16): id16 ^= id64 >> offset return id16 & 0xFFFF
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import math def is_prime(n: int) -> bool: """ Check wether a certain number is prime or not. Parameters ---------- n: int The number to check. Returns ------- bool True if the number is prime, False if it isn't. """ if n <= 1: return False if n == ...
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import re def enclose(s): """Enclose the string in $...$ if needed""" if not re.match(r'.*\$.+\$.*', s, re.MULTILINE | re.DOTALL): s = u"$%s$" % s return s
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def dot_notation(dict_like, dot_spec): """Return the value corresponding to the dot_spec from a dict_like object :param dict_like: dictionary, JSON, etc. :param dot_spec: a dot notation (e.g. a1.b1.c1.d1 => a1["b1"]["c1"]["d1"]) :return: the value referenced by the dot_spec """ attrs = dot_spec....
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def m_hook(self, node): """Alias .mm files to be compiled the same as .cpp files, gcc/clang will do the right thing.""" return self.create_compiled_task('cxx', node)
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def varint_encode(num): """Convert number into varint bytes :param num: number to encode """ buf = b'' while True: towrite = num & 0x7f num >>= 7 if num: buf += bytes(((towrite | 0x80),)) else: buf += bytes((towrite,)) break r...
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def parse_pattern(pattern): """Convert a string of 1s and 0s into a pattern of Trues and Falses. >>> parse_pattern('1010010') [True, False, True, False, False, True, False] """ return map(lambda x: True if x == '1' else False, pattern)
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def _check_installed_pkg(module, package, repository_path): """ Check the package on AIX. It verifies if the package is installed and informations :param module: Ansible module parameters spec. :param package: Package/fileset name. :param repository_path: Repository package path. :return: B...
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def GetIndexFromInputId(input_spec, input_id): """Get the 0-based index of the input_id inside input_spec. Args: input_spec: Dictionary with the input specification, mapping from input name to another dictionary with a 'time_limit' key. input_id: Id whose index must be retrieved. Returns: 0-...
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def totalSizeOf(s): """ @type s: C{str} or L{StringFragment} @return An estimate of how much memory (in bytes) string C{s} consumes. @rtype: C{int} """ return 30 + len(s)
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import argparse def parse_args(): """Arguments to pass to this Script""" parser = argparse.ArgumentParser(description="Parse arguments") ##file directories parser.add_argument('--data_dir', type=str, help='directory that contains train, test and target labels csv files') parser.add_argument('...
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def listify_cleanup(value): """Clean up top level splicer_code Convert newline delimited strings into a list of strings. Remove trailing newline which will generate a blank line. Or replace None with "" in a list. Used with nested dictionaries used to mirror scopes. CXX_definitions: | ...
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def cross3D(v1, v2): """Calculates the vector cross product of two 3D vectors, v1 and v2""" return (v1[1]*v2[2] - v1[2]*v2[1], v1[2]*v2[0] - v1[0]*v2[2], v1[0]*v2[1] - v1[1]*v2[0])
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def CombineDicts(a, b): """Unions two dictionaries by combining values of keys shared between them. """ c = {} for key in a: if b.has_key(key): c[key] = a[key] + b.pop(key) else: c[key] = a[key] for key in b: c[key] = b[key] return c
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def codegen_reload_data(): """ Parameters required reload codegen for the fn_pa_panorama package """ return { "package": u"fn_pa_panorama", "message_destinations": [u"palo_alto_panorama"], "functions": [u"panorama_get_address_groups", u"panorama_get_users_in_a_group", u"panorama_...
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def cubrt(x): """Returns the cubed root of x""" return round(x ** (1/3), 12)
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import re def _add_latex_syntax_around_scientfic_number_string(string): """Add curly braces around scientific numbers. Otherwise, siuntix will raise an error. """ if "e" not in string: out = string else: prefix, *num_parts, suffix = re.split(r"([+-.\d+])", string) number ...
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