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def timedistr(lstpos): """return a list of time distribution, -2048..0..2047 -> 2048..4096.0..2047 or 0-4096 overall -2048..2048 ~ -180~180 with the T center at 0 so to get back: i - 4096 if i > 2047 against the position """ #pos360 = [int(360*i/4096) for i in lstpos] ## import numpy as n...
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def pre(sql_in, params): """ Pre process sachima sql into agg mode before run it usage: "model": [("s_0038_apply.sql", db.ENGINE_IMPALA_DW, pivot_table.pre)], """ measures = params.get("measures") # measure_name,sum p_index = params.get("row_dims") # list p_col = params.get("col_dim...
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def IsFatalPushFailure(push_stdout): """True if retrying push won't help.""" return '(prohibited by Gerrit)' in push_stdout
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def srun(arg_dict,qos=True,time=10,mem=4): """Return srun call, with certain parameters appended. Arguments: ---------- arg_dict : dict Dictionary of arguments passed into this script, which is used to append parameters to srun call. qos : bool, optional Quality of service, set to ...
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from functools import reduce def reduce1_factorial(num): """Solution that uses reduce and a lambda""" return reduce(lambda x, y: x * y, range(1, num + 1), 1)
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import os def get_high_res_hands( folder_bought_template='misc/ten24_TexturesHands_R_L_RL_{:04d}/', folder_inhouse_template='misc/may_2018_inhouse_mpi_hands_{:04d}/', res=512, split='train', hand_type='BOTH', texture_types=['in_house', 'bought']): """ Args: ...
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def split_unique(df_data, field): """ Split the DataFrame based on unique value from field Parameters ---------- df_data : pandas DataFrame Original data to split field : String Column name to split data on unique value Returns ------- df_split : dict A dic...
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def get_edge_vertex_ids(g, sort=True): """get_edge_vertex_ids Returns a list of tuples containing the source and target for each edge in the graph. Parameters ---------- g : :obj:`graph_tool.Graph` A graph with edges. sorted : :obj:`bool`: Determines whether...
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def make_comment_body(comment_text): """Build body of the add issue comment request""" return { "body": { "type": "doc", "version": 1, "content": [ { "type": "paragraph", "content": [ { ...
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def logistic(x, r): """Logistic map, with parameter r.""" return r * x * (1 - x)
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import uuid def generate_unique_node(): """ Generate a unique node label.""" return str(uuid.uuid1())
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def get_emotion_dict(emo_metrics): """Returns a dictionary in which keys are emotions and values are confidences. Args: emo_metrics: A list of dictionaries, which each have the keys 'name' and 'confidence', describing emotions detected from FeelNet. Returns: A dictionary as described above. """ ...
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import re def isExist(content, error_print): """ :method: a sub-method to check isExist :param content: string;the content which is checked :param error_print: string :return: string("yes" or "no") """ pat_nothing = re.compile(r'No items found') searchable = re.search(pat_nothing, cont...
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import zipfile import os def unzip(filename): """ unzip a file """ try: with zipfile.ZipFile(filename,"r") as zip_ref: zip_ref.extractall(os.path.dirname(filename)) except Exception as oops: print("nvdjsonloader.py.unzip: %s, %s" % (oops, filename)) return False ...
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import random def split_rollouts(rollouts, train_frac=0.9): """Train-test split Useful for sample_batch """ idxes = list(range(rollouts['obses'].shape[0])) random.shuffle(idxes) if train_frac is not None: n_train_examples = int(train_frac * len(idxes)) train_idxes = idxes[:n_train_examples] va...
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def encode_int(i): """Encode an integer for a bytes database.""" return bytes(str(i), "utf-8")
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def obj_to_dict(obj): """Converts XML object to an easy to use dict.""" if obj is None: return None res = {} res['type'] = obj.tag res['id'] = obj.get('id') res['version'] = int(obj.get('version')) res['deleted'] = obj.get('visible') == 'false' if obj.tag == 'node' and 'lon' in o...
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from typing import List from pathlib import Path from typing import Set def get_cl_tags(files: List[Path]) -> List[str]: """ Come up with descriptive tags given a list of files changed. For each path, use the first rule that applies in the following order: 1) Pick the path component right after the last "li...
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def sep_params(model, loaded_roberta_keys): """Separate the parameters into loaded and not loaded.""" loaded_params = dict() not_loaded_params = dict() params_to_freeze = [] small_lr_params = dict() large_lr_params = dict() for n, p in model.named_parameters(): if n in loaded_roberta...
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def _make_list(x): """Make list when it is necessary""" if type(x) == list: return x return [x]
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def define_query(ra, dec, radius, use_all=False, extra=None): """ Define the SQL search string based on input, can be used by sqlcl !!! NOTE !!! This is still a very rough search, """ radius += 0.12 if extra: radius += extra # convert into arcmin radius *= 60.0 if (use_...
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def get_go_version(): """Not currently implemented""" return None
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def get_tuner_submodel_name(output_model_name="tuned_climpp", num_years=10, margin_in_days=45): """Returns submodel name for a given setting of model parameters """ return f"{output_model_name}_on_years{num_years}_margin{margin_in_days}"
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def validate_params(parameters, context=False, other_params={}): """Takes a list of parameters from a HTTP request and validates them Returns a string of errors (or empty string) and a list of params """ # Initialize error and params error_response = '' params = {} if context: par...
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def compute_chi_of_U(Z): """ Eq. 22 in Ferrara et al. 2019 """ chi = 8.7e+4*Z return chi
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def is_user_defined_new_style_class(obj): """Returns whether or not the specified instance is a user-defined type.""" return type(obj).__module__ != '__builtin__'
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def face_uv_get(face): """ Workaround 2.5x change. """ me = face.id_data uv_faces = me.uv_textures.active if uv_faces: return uv_faces.data[face.index] else: return None
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def test_nan(dataframe): """ Test if dataframe contains nan value Parameters ---------- dataframe: pandas dataframe Raises ------ ValueError If contains nan, raise ValueError Returns ------- is_valid: boolean True if did not contain nan, False if contain ...
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def calculate_interest_amount_stipend(starting_amount, interest_rate): """ After X number of years, how much would I have in the bank? :param starting_amount: The amount of money the bank has to start with. :type starting_amount: double :param interest_rate: The rate that interest is being added int...
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import math def absoluteAngleDifference(angle1, angle2, rad=1): """ https://gamedev.stackexchange.com/questions/4467/comparing-angles-and-working-out-the-difference""" ref = 180 if rad: ref = math.radians(180) diff = ref - abs( abs(angle1 - angle2) - ref) return diff
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from bs4 import BeautifulSoup def make_soup(xml_tree): """make beautifulsoup object for interpret xml file Arguments: xml_tree {string} -- content of xml file Returns: (list,string,bool) -- return list of all doc and root name in xml file and check for exception files """ ...
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import math def split_array_averagely(arr, m): """ split the array to n small chunks with nearly the same sizes. Args: arr: m: Returns: """ n = int(math.ceil(len(arr) / float(m))) return [arr[i:i + n] for i in range(0, len(arr), n)]
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def hits(service): """Returns metric 'Hits'.""" return service.metrics.select_by(**{'system_name': 'hits'})[0]
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def parse_field(field_string): """ Get a tuple of the first entries found in an psimitab column (xref, value, desc) :param field_string: :return: A tuple (xref, value, desc) - desc is optional """ parts = field_string.split(":") xref = parts[0] rest = parts[1] if "(" in rest: ...
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def get_package_name(package, customer=None, python="2.7"): """ returns the egg filename (without the fs path), e.g. nexiles.gateway.appservice-1.0.0-py2.7-customer.egg """ if customer: return "{}-{}-py{}-{}.egg".format( package.import_name, package.version, ...
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def d1d2_index(det_df,d1,d2): """ Return the index of a given detector pair from det_df. Parameters ---------- det_df : pandas dataFrame dataFrame of detector pair indices and angles d1 : int detector 1 channel d2 : int detector 2 channel Returns ---...
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def mutable_set_of_primitives(primitives): """ Fixture that yields back :class:`~collections.MutableSet` instances that contain a single primitive value. """ return {primitives}
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import os def ensure_file(file): """Ensure a single file exists, returns the full path of the file if True""" # tilde expansion file_path = os.path.expanduser(file) assert os.path.isfile(file_path), "The file {} doesn't exist. Please create the file first".format(file) return file_path
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def load_from_file(ids, data_path = "."): """ Takes an array of ids or single id and loads that srt file and returns the srt files in a dictionary with IDs as keys. """ if type(ids) is int or type(ids) is str: with open(data_path+str(ids)+".srt","r") as f: data = f.read() ...
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from datetime import datetime def parse_time(s='2016-03-16T17:31:14Z'): """ Converts Piazza Date-time format into a pythonic construct. Examples of Piazza Datetime: - 2016-03-16T17:31:14Z """ format = "%Y-%m-%dT%H:%M:%SZ" return datetime.strptime(s,format)
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from typing import Dict from typing import Any def occluders_too_close(occluder: Dict[str, Any], x_position: float, x_scale: float) -> bool: """Return True iff a new occluder at x_position with scale x_scale would be too close to existing occluder occluder.""" existing_scale = occluder['shows'][0]['scale'...
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import argparse def build_parser(): """ Build argument parser. """ parser = argparse.ArgumentParser(description=__doc__, formatter_class=argparse.ArgumentDefaultsHelpFormatter) # Required args parser.add_argument("--test_gct_path", "-t", required=True, help="path to i...
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def get_inputs(node, kwargs): """Helper function to get inputs""" name = node["name"] outputs_lookup = kwargs["outputs_lookup"] inputs = node["inputs"] attrs = node.get("attrs", {}) input_nodes = [] for ip in inputs: input_node_name = outputs_lookup[ip[0]][ip[1]].name input_...
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def write_header(header): """Write the header. Not implemented.""" return (header or [])
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def safe_classifier(request, classifier): """ Fixture - instantiate NfqClassifier and clear **all** after test :param request: test function :type request: `:class:_pytest.python.SubRequest` :param classifier: classifier fixture :type classifier: `:class:common.classifier.NfqClassifier` :r...
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def birch(V, E0, B0, BP, V0): """ From Intermetallic compounds: Principles and Practice, Vol. I: Principles Chapter 9 pages 195-210 by M. Mehl. B. Klein, D. Papaconstantopoulos paper downloaded from Web case where n=0 """ E = ( E0 + 9 / 8 * B0 * V0 * ((V0 / V) ** (2 / 3) - 1...
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def build_phenotype(phenotype_info): """Build a phenotype term object Args: phenotype(dict) Returns: phenotype_obj(dict) """ phenotype_obj = dict( phenotype_id=phenotype_info["phenotype_id"], disease_models=phenotype_info["disease_models"], ...
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import os def run_local_cmd(cmd, get_output = False): """ Runs a local command. Optionally, return the cmd output. Input: - cmd: Command to run. - get_output: whether to return the output of the cmd. """ print( "Local cmd $ %s" % cmd ) if not ...
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import numpy def min_(x): """ [Y,I] = MIN(X) returns the index of the minimum value in vector I. If the values along the first non-singleton dimension contain more than one minimal element, the index of the first one is returned. """ if x.size <= 0: return (numpy.array([None]), numpy.a...
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import re def parse_show_install(cmd_output): """ Parse output of 'show install request' :param cmd_output: an iterable of lines (str) from the command output :return: (is_complete, is_success) tuple of bool. is_complete indicates whether the request completed, is_success indicates whether...
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from typing import List def split_string(x: str, n: int) -> List[str]: """ Split string into chunks of length n """ # https://stackoverflow.com/questions/9475241/split-string-every-nth-character # noqa return [x[i:i+n] for i in range(0, len(x), n)]
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import tempfile import os import subprocess def _markdown2wiki(markdown): """ Convert markdown to JIRA wiki format. Uses https://github.com/Shogobg/markdown2confluence """ if markdown is None: return "\n" # Allow empty/blank input with tempfile.TemporaryDirectory() as tmp_dir: md_...
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def _is_tabular(structure): """ Determines if a PDS4 structure can be shown as a table. Tabular structures are either: (1) Tables, or (2) Arrays Parameters ---------- structure : Structure PDS4 structure to check. Returns ------- bool True if *structure...
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def calc_row2(r, m1, m2): """ Calculate a row 'r' of the multiplication output of matrices m1 and m2 """ d = [] print('Calculating for',r) for y in range(m2.m): # import pdb;pdb.set_trace() # import forkedpdb;forkedpdb.ForkedPdb().set_trace() d.append(sum(item[0]*item[1] f...
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def init_track_kwargs(object_type): """ :returns: kwargs dict fro Track initialisation """ return { 'title': None, 'artist': None, 'album': None, 'duration': None, 'position': None, 'thumbnail_url': None, 'metadata': { 'object_id': None...
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def get_localized_name(name): """Returns the localizedName from the name object""" locale = "{}_{}".format( name["preferredLocale"]["language"], name["preferredLocale"]["country"] ) return name['localized'].get(locale, '')
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import pathlib import numpy import io def load_vec( emb_path: pathlib.Path, n_max: int = 200_000, ) -> numpy.ndarray: """Load vectors from FastText file.""" vectors = [] word2id = {} with io.open(emb_path, 'r', encoding='utf-8', newline='\n', errors='ignore') as f: next(f) for...
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from datetime import datetime def time_to_datetime(t_time): """ 时间戳转datetime """ try: d_time = datetime.fromtimestamp(t_time) except OSError as ose: return None return d_time
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def sort_strlist(s): """Deserialise, sort, and reserialise a list of strings in the format "potato,spade,elephant" """ return ','.join(sorted(s.strip().split(',')))
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from bs4 import BeautifulSoup def getText(keyfile): """ Extracts text from specified input file @params: keyfile - Required : file to process (file) """ try: soup = BeautifulSoup(keyfile, "html.parser") for script in soup(["script", "style"]): script.extract(...
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def format_tune_string(infos): """ Contruct a string from a dict created from an "User tune" event. :param dict infos: The informations :return: The formatted string :rtype: :py:class:`str` """ elems = [] track = infos.get('track') if track: elems.append(track) title = i...
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import unittest def test_suite(): """Return the test suite, duh flake8. Come on! If a function is obviously named it shouldn't require a docstring. This is pretty much like commenting obvious code:: x += 1 # Increment x by 1 It's just noise and doesn't add anything. Inane flake8 adherence ...
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def build_slack_payload(budgets, image_url): """ Builds the payload that is sent to the Slack webhook about our budget overspend. """ details = "\n".join( [f"{b.name}: {b.forecasted_spend} > {b.budget_limit}" for b in budgets] ) return { "username": "aws-budgets", "i...
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from typing import Callable def _get_add_function() -> Callable: """ Return a function with the ability to track state, used for testing. """ def func(x: int, y: int) -> int: func.executed = True # type: ignore[attr-defined] return x + y func.executed = False # type: ignore[att...
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import re def does_not_have_bad_pairs(chars): """ It does not contain the strings ab, cd, pq, or xy, even if they are part of one of the other requirements. """ bad_pairs = ['ab', 'cd', 'pq', 'xy'] if not re.search('|'.join(bad_pairs), chars): return True return False
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def get_attribute(t, key: str): """ Get an attribute from a given callable :param t: the callable :param key: the key, the attributes name :return: the attribute data """ return getattr(t, key)
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import math def scaling(axis_len): """Scaling of plot figure size Parameter: ---------- axis_len : int Number of rows or columns Return: ---------- scale : float scale for axis """ return 0.5/math.log10(axis_len)
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import pkg_resources import json def _load_data(file: str) -> dict: """Load the one of the data json files.""" stream = pkg_resources.resource_stream(__name__, file) return json.load(stream)
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def der_order(order: int) -> str: """Return correct suffix for order. >>> der_order(1) ... "1-st" >>> der_order(4) ... "4-th" """ _suffix = ["st", "nd", "rd"] if order - 1 > 3: return f"{order}-th" else: return f"{order}-{_suffix[order - 1]}"
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def accuracy(output, target): """ Computes accuracy, from predicted and true labels. """ batch_size = target.size(0) _, pred = output.topk(1, 1, True, True) correct = pred.eq(target.view(-1, 1).expand_as(pred)) correct_total = correct.float().sum() return correct_total * (100.0 / batch_...
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from typing import Set def match_events( a: Set[str], b: Set[str] ) -> bool: """ Checks if two groups of events are matched. :returns: `True` - match found, `False` otherwise. """ return any(x in b for x in a)
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def sel_class(num, prob): """ Set num to 1 with with sufficient probability """ if num < prob: return 0 else: return 1
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import os import tarfile def MkTarball(src, dst_tar_file): """Make tarball. Note: basename of |src| would show up as a file's directory name in a tar file. e.g. If you give "/tmp/foo/bar" that has followings inside as |src|: /tmp/foo/bar/gomacc /tmp/foo/bar/compiler_proxy then, the generated arch...
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def multicommand_get_command_short_help(self, ctx, cmd_name): """Returns the short help of a subcommand It allows MultiCommand subclasses to implement more efficient ways to provide the subcommand short help, for example by leveraging some caching. Parameters ---------- ctx : click.core.Contex...
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import json def _parse_article_nos(dct): """\ Parses the article numbers. Returns either a dict or None. """ article_numbers = dct.get('ft_article_nos') if article_numbers in (None, '[]'): return {} # Use '' as key since JSON accepts only strings as key, not None / null return...
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import string import random def id_generator(size=10, chars=string.ascii_letters + string.digits): """Method to create random ids :param size: define the string size :param chars: the characters to be use to create the string return ''.join(random.choice(chars) for x in range(size)) """ retu...
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def mydub(a): """Double a """ return a * 2
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import torch def get_IoU(predictions: torch.Tensor, labels: torch.Tensor, threshold: float = 0.5): """Code inspired by https://www.kaggle.com/iezepov/fast-iou-scoring-metric-in-pytorch-and-numpy """ eps = 1e-6 # assert N x H x W if len(predictions.shape) != 3: predictions.unsqueeze_(0)...
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def strip_comments(line: str) -> str: """Remove comments from line""" # comment at the beginning of the line if line.startswith("#"): return "" # in-line comment left = line.rsplit("#", 1)[0] # be sure we are not inside a string if left.count('"') % 2 == 0 and left.count("'") % 2 ==...
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def get_alphabet_mapping(filename): """ Given a filename, return a 2D list of [alphabet1, alphabet2] representing two alphabet list mappings """ with open(filename) as data: res = [] for line in data.read().splitlines(): alphabet = [] for letter in line: ...
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def HMStime(s): """ Given the time in seconds, an appropriately formatted string. """ if s<60.: return '%.3f s'%s elif s<3600.: return '%d:%.3f'%(int(s/60%60),s%60) else: return '%d:%d:%.3f'%(int(s/3600),int(s/60%60),s%60)
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import collections def unique2lists(list1, list2, add=False): """Unique list1 and list2 based on list1 Args: list1(list): list2(list): add(Optional(bool)): add list2 elements with list1 duplicates Returns: list,list """ if add: cntr = collections.Counter() ...
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def format_ISO_time(year,doy,timestr): """ Format an ISO-like time string: YYYY-DDDTHH:MM @param year : 4-digit year @type year : str @param doy : 3-digit day of year @type doy : str @param timestr : HHMM @type timestr : str @return: str """ return year + '-' + doy + 'T' + timestr[0:2] + ':...
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import click def validate_page_size(ctx, param, value): """Ensure that a valid value for page size is chosen.""" # pylint: disable=unused-argument if value == 0: raise click.BadParameter("Page size must be non-zero or unset.", param=param) return value
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def residual(coord_vec, vec_map, point_coords, from_point, to_point, from_to_delta): """Callback for scipy.optimize.leastsq() to place points """ # Write the iterated coordinates back into the DataFrame num_points = len(coord_vec) / 2 point_coords.loc[vec_map,'ew'] = coord_vec[num_points:]...
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import multiprocessing def numberOfProcessors(): """ return the number of Processors """ return multiprocessing.cpu_count()
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def thirtyone_check_en(df, tweet_lang_col_name): """ Check if tweet language is English when tweet_language column is present """ non_en_tweets = [] for i, j in df.iterrows(): if(df[tweet_lang_col_name].iloc[i] != 'en'): # check if tweet_language is 'e...
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import string def normalize(s): """ Normalize a string. """ if not isinstance(s, str): s = str(s) return string.capwords(" ".join(s.strip().split()))
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def get_detname(det_id): """Return NRC[A-B][1-5] for valid detector/SCA IDs""" det_dict = {481:'A1', 482:'A2', 483:'A3', 484:'A4', 485:'A5', 486:'B1', 487:'B2', 488:'B3', 489:'B4', 490:'B5'} scaids = det_dict.keys() detids = det_dict.values() detnames = ['NRC' + idval for idval in d...
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import time def log(msg): """Print string s and current time.""" t = time.localtime() current_time = time.strftime("%H:%M:%S", t) return f"{current_time} | {msg}"
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import re def extract_keywords(value): """ Extract all keywords from the string. """ keywords = [k.strip() for k in str(value or '').replace( '[inline]', '').split('.') if k.strip() != ''] keywords = [re.sub(r' ([0-9]+)\[pp\]$', ' \\1 Per Player', k, re.I) for k in keyw...
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def scalar(p1, p2): """Scalar product between p1 and p2""" return p1.x*p2.x + p1.y*p2.y + p1.z*p2.z
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import re def partial_format(target, **kwargs): """Formats a string without requiring all values to be present. This function allows substitutions to be gradually made in several steps rather than all at once. Similar to string.Template.safe_substitute. """ output = target[:] for tag, var in re.findall...
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def get_ins_mapping(ins_list, attr, deep=False): """ Create a dict map of the specified object list with the specified attribute :param ins_list: :param attr: :param deep: :return: """ map_dict = {} if deep is True: keys = attr.split('.') for item in ins_list: ...
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def human_list(l): """ Formats a list of strings in a human-friendly way. """ l = ["'{0}'".format(x) for x in l] if len(l) == 0: return 'nothing' elif len(l) == 1: return l[0] elif len(l) == 2: return ' and '.join(l) else: return ', '.join(l[:-1]) + ' and...
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import requests def get_saved_peripherals(api_url, protocol): """ To be used at bootstrap, to check for existing peripherals, just to make sure we delete old and only insert new peripherals, that have been modified during the NuvlaBox shutdown :param api_url: url of the agent api for peripherals ...
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import random import string def random_string(len): """generate n-length random string Args: len (int): length of string """ return "".join(random.choices(string.ascii_letters + string.digits, k=len))
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import warnings import inspect def _get_members(*args, **kwargs): """ Same as :func:`inspect.getmembers` except that it will silence warnings, which avoids triggering deprecation warnings just because we are scanning a class """ with warnings.catch_warnings(): warnings.simplefilter(act...
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import math def test3(x, sin=math.sin): """ >>> %timeit test3(123_456) 105 µs ± 3.35 µs per loop (mean ± std. dev. of 7 runs, 10000 loops each) """ res = 1 for _ in range(1000): res += sin(x) return res
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import collections def format_int_list(int_list, delim=',', range_delim='-', delim_space=False): """ Returns a sorted range string from a list of positive integers (*int_list*). Contiguous ranges of integers are collapsed to min and max values. Reverse of :func:`parse_int_list`. Args: int...
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