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def sort_fractions_by_denominator(fractions): """ The function takes a list of `Fraction` objects as its argument. It returns a list of the fractions sorted by its denominator. Use a lambda expression for the key function. For example, INPUT: [1/2, 3/4, 2/3] OUTPUT: [3/4, 2/3, 1/2] """ ...
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def clone_instance(instance, fieldnames=None): """ returns a copy of the passed instance. .. warning: All fields are copied, even primary key :param instance: :py:class:`django.db.models.Model` instance :return: :py:class:`django.db.models.Model` instance """ if fieldnames is None...
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import requests import time def get_mac_address_vendor(mac_address: str, retries: int = 10) -> str: """ """ # Can also use https://macvendors.co/api/{mac_address} for a richer payload prefix = ''.join(mac_address.split(':')[0:3]) response = requests.get(f'https://macvendors.com/query/{prefix}') ...
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import argparse def args_parser(): """ Parsing arguments passed to script Returns ------- args: Input arguments to the script """ print('Parsing in progress') parser = argparse.ArgumentParser() parser.add_argument('survey', type=str, help='Options: eco/resolvea/r...
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def fixture_env_name() -> str: """Get the name of a testing environment""" return "D_marshmallow"
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def get_optimizer(dataset_name): """ Arguments --------- dataset_name (str): name of dataset being trained Returns ------- optimizer (dict): parameters defining the optimizer to use during training. """ if "noscope" in dataset_name: # We use...
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def get_training_status(api, cfg, job_id, model_name): """ Gets the status of the given training job id Arguments : api : object, API object to access CloudML Engine cfg : dict, Configurations from yaml file job_id : string, Job ID of the training job model_name : string, Na...
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def TriFusion(l): """ Implementation of the "tri fusion" algorithm """ n = len(l) if n<=1: # Si vide ou un seul éléments, alors déjà trié return l else: sl = [] A = l[:n//2] B = l[n//2:] A = TriFusion(A) B = TriFusion(B) while ...
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def grazing(vs, eaten, zooplankton): """Zooplankton grows by amount digested, eaten decreases by amount grazed""" return {eaten: - vs.grazing[eaten], zooplankton: vs.grazing[eaten]}
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def aa_10(x, ind): """Function A with order 1,0""" if ind[0] == 0 and ind[1] == 0: return 2 * (x[:, 0:1] + x[:, 1:2]) if ind[0] == 0 and ind[1] == 1: return -2 * x[:, 0:1] if ind[0] == 1 and ind[1] == 0: return -2 * x[:, 0:1] if ind[0] == 1 and ind[1] == 1: return 2 *...
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def normalize(lines: str) -> str: """ Remove trailing whitespace from each line, keeping all line breaks except the last.""" return '\n'.join(line.rstrip() for line in lines.strip().splitlines())
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def normalize_value(val): """ Normalize strings with booleans into Python types. """ if val is not None: if val.lower() == 'false': val = False elif val.lower() == 'true': val = True return val
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from typing import Dict from typing import Tuple def dense_dict(dictionary: Dict, removables: Tuple = (None,)) -> Dict: """Return a dictionary ignoring keys with None values, recursively.""" return { k: dense_dict(v) if isinstance(v, dict) else v for k, v in dictionary.items() if v not...
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def combine_lines(components, element_list, background): """ Combine results for different lines of the same element. And also add pileup, userpeak, background, compton and elastic. Parameters ---------- components : dict output results from lmfit element_list : list list of...
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def alg_int(u, v): """ Given two slopes, compute their algebraic intersection number. """ a, b = u c, d = v return a*d - b*c
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from typing import Any def mock_create_cache_directories(self: Any, **kwargs: Any) -> int: """Mock create cache directories. Don't actually need the directories created in testing """ return 1
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def current(widget): """Decorator to run callable on the current thread. Useful for quickly changing with `tkthread.main`""" def wrapped(func): func() return func return wrapped
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import os def create_folder(directory): """Function to create a directory @param: directory Name of the directory to create in string form """ if isinstance(directory, str): if not os.path.exists(directory): os.makedirs(directory) return True return False
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import torch def bound_and_scale(scale, bounds): """ Combination of scaling and bounding Args: scale (torch.tensor): divide input by this value bounds (torch.tensor): tuple, clamp to (bounds[0], bounds[1]) """ return lambda x: torch.clamp(x / scale, bounds[0], bounds[1])
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def encipher(sentences, shifts): """ Encipher the provided sentences with _SHIFT shifts Args: sentences (list of string): list of sentences to get encipher shifts (list of Layer): encipher Returns the enciphered sentences """ ciphers = [] for sentence in sentences: cipher = "" for i in...
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from datetime import datetime def date_from_geo_string(geo_string): """get date from GEO release date、last update date、submission date string""" return datetime.strptime(geo_string, '%Y-%m-%d').date()
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def nexus_infile(myid,itwist): """ nexus style input name Args: myid (str): prefix itwist (int): twist index Returns: str: input filename """ prefix = myid.split('.')[0] infile = '.'.join([prefix,'g%s'%str(itwist).zfill(3),'twistnum_%d'%itwist,'in','xml']) return infile
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def flip_subarray_params(input_params): """ Helper function to switch the row and column entries in a SUBARRAY tuple """ assert isinstance(input_params, (tuple,list)) assert len(input_params) == 4 output_params = [input_params[1], input_params[0], ...
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def listWrite(lt): """Takes a list and returns the first element as a string""" return str(lt[0])
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import json def get(client, bucket): """ Get the BIG-IP admin password from the S3 bucket created by the CFT """ data = client.get_object(Bucket=bucket, Key="credentials/master") json_data = data['Body'].read() return json.loads(json_data)['password']
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import sys def get_info(line, bit_thresh): """ get info from either ssu-cmsearch or cmsearch output """ if len(line) >= 18: # output is from cmsearch id, model, bit, inc = line[0].split()[0], line[2], float(line[14]), line[16] sstart, send, strand = int(line[7]), int(line[8]), line[9] ...
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def count(catalog): """Given a Catalog, return the number of strings actually translated.""" translated = [m for m in catalog if m.string] return len(translated)
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import argparse def get_parser(): """ Creates an argument parser. """ parser = argparse.ArgumentParser() parser.add_argument( '--url', type=str, required=False, default="http://files.grouplens.org/datasets/movielens/ml-100k.zip", help='url to download movielens dat...
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import os import json def read_cfg(path): """ Function reads json configuration file. Parameters: path (string): JSON configuration file path. Returns: dict: Tool configuration dictionary. Read config on success, default config otherwise. """ # to avoid script error default...
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def filter_user(user, using='records', interaction=None, part_of_week='allweek', part_of_day='allday'): """ Filter records of a User objects by interaction, part of week and day. Parameters ---------- user : User a bandicoot User object type : str, default 'records' ...
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def json_dict_copy(json_object, property_list, defaultValue=None): """ property_list = [ { "name":"name", "alternateName": ["name","title"]}, { "name":"birthDate", "alternateName": ["dob","dateOfBirth"] }, { "name":"description" } ] """ ret = {} for pr...
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def sequence_key(sequence): """Returns a key for mapping sequence paths to graph vertices.""" return ":".join([str(s) for s in sequence])
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def translateCodonToAmino(codon): """Translate a DNA codon to it's Amino acid using the RNA codon table.""" rna_codon_table = { ('GCT', 'GCC', 'GCA', 'GCG'): 'A' } return rna_codon_table[codon]
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def dict_flat_get_full(): """Get flat dict for :func:`get` of full data of Dataverse. Returns ------- dict Full Datafile dictionary returned by :func:`get`. """ return { "name": "Scientific Research", "alias": "science", "dataverseContacts": [ {"cont...
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import html import re def clean_title(raw_input): """ Removes formatting weirdness from title strings. @param raw_input: the raw, unsanitized input @return cleaned string """ if raw_input == '': return raw_input if raw_input is None: return '' t = raw_input t = ...
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def sane(id): """EnergyPlus variable names my not contain periods.""" return id.replace('.', '_')
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def use_signals(request): """Use signals for timing out or not.""" return request.param
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def _parse_user_ids(users, client): """parse a string of users separated by commas into IDS""" ids = [] split_users = users.split(',') for u in split_users: u = u.strip() if len(u) > 0: uid = client.users.list(query=u) if uid: ids.append(uid[0]['id...
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import os import glob def redcap_data_dictionaries() -> list: """Return paths to REDcap *DataDictionary* files from 'data' directory""" base = os.path.dirname(__file__) return glob.glob(os.path.join(base, "*DataDictionary*"), recursive=False)
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def parse_sudoku_file(sudoku_folder_path, sudoku_name): """Lukee .sudoku -tiedoston ja palauttaa sen tekstijonona Args: sudoku_folder_path: Polku .sudoku -tiedostojen kansioon sudoku_name: Sudokun nimi kansiossa Returns: .sudoku -tiedoston tekstijonona """ # Read the .sudo...
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import socket def IPv4(ip_addr): """ Validate a string as an IPv4 address. See `man 3 inet` for details. """ ip_addr = str(ip_addr) try: socket.inet_aton(ip_addr) except socket.error: raise ValueError('Invalid IPv4 address: %s' % ip_addr) return ip_addr
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def cg_has_node(cg, node): """ Return True if the cluster graph contains the corresponding node :param cg: :param node: :return: """ return cg.nodes().__contains__(node)
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def get_movie_data_both_channels (data, movie_ID): """Pull out track data in both channels for one movie out of a dataframe. Args: data (Pandas dataframe): Parsed tracks for each movie, as created by the read_2color_data function of the parse_trackmate module. Contains the follo...
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def create_in_term_for_db_queries(values, as_string=False): """ Utility method converting a collection of values (iterable) into a tuple that can be used for an IN statement in a DB query. :param as_string: If *True* the values of the list will be surrounded by quoting. :type as_string: :cl...
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def list_of_genes_ecoli(): """List of genes for testing (E. coli)""" return ['b0720','b1241','b1761','b0003']
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def track_indexed_db_for_origin(origin: str) -> dict: """Registers origin to be notified when an update occurs to its IndexedDB. Parameters ---------- origin: str Security origin. """ return {"method": "Storage.trackIndexedDBForOrigin", "params": {"origin": origin}}
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def __pos__(self) : """Return self""" return self;
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def parse_bq_record(bq_record): """Parses a bq_record to a dictionary.""" output = {} for key in bq_record: output[key] = [bq_record[key]] return output
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from typing import Dict from typing import Any import yaml def _read_config(config_file_path: str) -> Dict[str, Any]: """Cached loading and decoding of the config file.""" with open(config_file_path) as file: data = yaml.load(file, Loader=yaml.SafeLoader) if not data: raise RuntimeError(...
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def get_node_contexts(pipeline): """Get a dict of node_name->node_context from pipeline""" contexts = {k: getattr(pipeline[k], "context", {}) for k in pipeline._node_lookup} return contexts
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def before(value, a): """Find first part and return slice before it. """ pos_a = value.find(a) if pos_a == -1: return "" return value[0:pos_a]
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def numColors(qimage): """Compatibility function btw. PyQt4 and PyQt5""" try: return qimage.numColors() except AttributeError: return qimage.colorCount()
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def dumps(blackbird): """Serialize a blackbird program to a string. Args: blackbird (BlackbirdProgram): a :class:`BlackbirdProgram` object Returns: str: the serialized Blackbird program """ return blackbird.serialize()
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import subprocess import sys def getInstalledPackages(): """ Returns list of installed packages. :return list-str" """ reqs = subprocess.check_output([sys.executable, '-m', 'pip', 'freeze']) installed_packages = [r.decode().split('==')[0] for r in reqs.split()] return installed_packages
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import os def file_is_outdated(file_path, reference_file_path): """ Check if the given file is outdated compared to the reference file. Also returns true if the reference file does not exist. :param file_path: Path to the file to check. :type file_path: str :param reference_file_path: Path t...
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def setparas(pdict,ddict,args=0): """use paraster dict and default paraster dict to set the runtime variter""" for key in ddict.keys(): if pdict.has_key(key): if pdict[key]: ddict[key]=pdict[key] else: ddict[key]=1 if args and pdict.has_ke...
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def scalar_eq(x, y): """Implement `scalar_eq`.""" return x == y
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def select_all_photo_thumbnail(session): """Get a list of all image thumbnails from db""" session.execute(""" SELECT url, title FROM photos """) return session.fetchall()
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import os import hashlib def locate_checkpoint(checkpoint_dir, msg): """ This checks if a message has already been indexed by using a digest of the first 300 characters, which includes a date, message id, source and destination email addresses. :param checkpoint_dir: This contains the path where check...
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import re def is_copy_modify_with_no_change(diff_header): """Returns true if similarity index is 100% in the diff header.""" return re.search(r"(?m)^similarity index 100%", diff_header)
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from functools import reduce def modeOfLengths(input): """ PROTOTYPE: modeOfLengths(input) DESCRIPTION: Finds the mode (most frequently occurring value) of the lengths of the lines. ARGUMENTS: - input is list of lists of data RETURNS: mode as integer """ freq = {} ...
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def create_route_map(obj): """ Iterates of all attributes of the class looking for attributes which have been decorated by the @on() decorator It returns a dictionary where the action name are the keys and the decorated functions are the values. To illustrate this with an example, consider the foll...
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from typing import BinaryIO def _bytes_match(fd: BinaryIO, expected: bytes) -> bool: """Peeks at the next bytes to see if they match the expected.""" try: offset = fd.tell() data = fd.read(len(expected)) fd.seek(offset) return data == expected except IOError: return...
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def remove_result_attr(result): """Remove all attributes from the output""" filtered_list = [] for tup in result: lis = list(tup) removeset = set([2]) filtered_list.append(tuple([v for i, v in enumerate(lis) if i not in removeset])) return filtered_list
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def juftmi(x): """x juft bo'lsa True, aks holda False qaytaruvchu funksiya""" return x%2==0
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def splitPath(path, sep='/'): """ Chops the first part of a /-separated path and returns a tuple of the first part and the tail. If no separator in the path, the tail is None """ sepIdx = path.find(sep) if sepIdx < 0: return (path, None) return path[:sepIdx], path[se...
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def is_valid_deck(deck): """(list of int) -> bool Precondition: the length of input list is a list of number. Return true iff the input deck is a valid deck of cards, which means number of cards in the deck is consecutive. Return false if the input deck is not a valid deck of cards. >>> deck ...
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def volumes(cfg): """Return list of dicts defining task container volumes""" aux_mount = cfg.get('auxiliary_mount') aux_dest = cfg.get('aux_dir') stor_mount = cfg.get('storage_mount') stor_dest = cfg.get('espa_storage') return [{"container_path": aux_dest, "host_path": aux_mount, "mode": ...
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import os import pathlib import glob import shutil def copy_files(files_type, output): """Copies the files from the input folder to the output folder """ total = 0 out = dict() for (files, folder_type) in files_type: counter = 0 full_path = os.path.join(output, folder_type) ...
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import argparse def parse_args(): """ Args used for preprocessing """ PARSER = argparse.ArgumentParser(description=__doc__, formatter_class=argparse.RawTextHelpFormatter) PARSER.add_argument('--raw_data_dir', dest='data_dir', ...
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async def rick() -> str: """Rickrolling!""" return "https://www.youtube.com/watch?v=dQw4w9WgXcQ"
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import math def _daylight_hours(sunset_hour_angle_radians): """ Calculate daylight hours from a sunset hour angle. Based on FAO equation 34 in Allen et al (1998). :param sunset_hour_angle_radians: sunset hour angle, in radians :return: number of daylight hours corresponding to the sunset hour an...
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def get_no_data_value(sensor): """ Hook for someone to somehow figure out the right NoDataValue""" return -9999
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import os import shutil def which(program, mode=os.F_OK | os.X_OK, path=None): """ Given a command, mode, and a PATH string, return the path which conforms to the given mode on the PATH, or None if there is no such file. `mode` defaults to os.F_OK | os.X_OK. `path` defaults to the result of ...
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def separate_equally(seq, n=5): """ #return index of equally distance of a sequence >> separate_equally([i for i in range(100)],4) >> ([25, 50, 75, 100], 25) """ delta = len(seq) / n start, res = 0, [] while (True): start += delta if start > len(seq): break ...
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def gateway_kind(request): """Gateway class to use for tests""" return request.param
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import math def lg(n): """ Returns logarithm of n in base 2. """ return math.log(n, 2)
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def strip_quotes(string): """ Strips quotes off the ends of `string` if it is quoted and returns it. """ if len(string) >= 2: if string[0] == string[-1]: if string[0] in ('"', "'"): string = string[1:-1] return string
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def __get_token(path: str): """ Get the API token from the container's file system. """ with open(path, "r", encoding="utf-8") as file: return file.read()
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import json def filter_json(result): """ Builtin Callback, change stdout to json >>> result = filter_json(ssh_result(["output"], ["error"], "foo", 0)) >>> result.dump() foo [["output"], ["error"], 0] error 0 0 None """ result.out = [json.dumps((result.out, result.err, result.retcode))] ...
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def _get_element_attr_or_none(document, selector, attribute): """ Using a CSS selector, get the element and return the given attribute value, or None if no element. Args: document (HTMLElement) - HTMLElement document selector (str) - CSS selector attribute (str) - The attribute to g...
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def pade_42(k, params): """ Pade [4,2] in eqs.(10) and (11) has several typos this is now the correct formula from the 2016 paper old arguments: pade_42(k, l, a, b, g, d, w) """ l = params[0] a = params[1] b = params[2] g = params[3] d = params[4] w = params[5] a4b2=a*...
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def write_int(x): """ Examples -------- >>> sandy.write_int(10) ' 10' >>> sandy.write_int(-1e5) ' -100000' >>> with pytest.raises(ValueError): sandy.write_int(-1e10) """ y = f"{int(x):>11d}" if len(y) > 11: raise ValueError(f"Integer '{y}' exceeds 11 char...
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import pickle def load_from_file(filename): """Load a past state from file. """ f=open(filename,'rb') try: return pickle.load(f) except EOFError: print('Nothing written to file.')
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def py_eval(formula: str) -> float: """Calculates the result of the formula.""" return eval(formula)
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def invert_sign(num): """Change sign of number or add/remove leading sign of str.""" if isinstance(num, (float, int)): return -1 * num elif isinstance(num, str): if num.startswith('-'): return num[1:] return '-{0}'.format(num) raise ValueError( 'Num needs to b...
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def move_n_wrapped_lines_down(text, max_line_width, start, n): """Return position that is n lines below start.""" position = text.find('\n', start) l = len(text) - 1 if position == -1 or position == l: return l while 1: eol = text.find('\n', position) if eol == -1 or eol == l...
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def as_microsoft(expression): """ Decorated function is added to the provided expression as the Microsoft vender specific as_sql override. """ def dec(func): setattr(expression, 'as_microsoft', func) return func return dec
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import tempfile import os def check_mesh_diff(mesh1_filename: str, mesh2_filename: str, print_diff: bool = True): """ WARNING: this function uses `os.system` and could be used for hostile purposes. Make *sure* your filenames are valid paths. Some filename checking is done to try to prevent this. ...
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def evaluate(data_iter, net, loss_func, mining_func): """ evaluate validate loss :param data_iter: :param net: :param loss_func: :param mining_func: :return: """ net.eval() loss_sum = 0.0 n = 0 for batch_idx, (X, y) in enumerate(data_iter): X = X.cuda() y ...
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def _get_like_function_shapes_chunks(a, chunks, shape): """ Helper function for finding shapes and chunks for *_like() array creation functions. """ if shape is None: shape = a.shape if chunks is None: chunks = a.chunks elif chunks is None: chunks = "auto" ...
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from pathlib import Path def search_just(directory='buckets', files_glob='**/*.json'): """ 批量搜索文件 """ p = Path(directory) files_list = (i for i in p.glob(files_glob)) return files_list
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from io import StringIO def ret_a_stream(): """ Return a stream of text """ ret = StringIO() ret.writelines(['1. hello\n', '2. world\n']) return ret
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def format_roster(DF, formation): """ Cleans up dataframe by removing the coach, GKs, and trainees. Maintains the formation list. DF starts with players names as columns, rows are 0 - 22 """ DF = DF.set_index(['POS']) DF = DF.transpose() # Remove Coach? coach = 'Rogelio Nakamura' ...
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def get_kth_minimum(x, k=1): """ gets the k^th minimum element of the list x (note: k=1 is the minimum, k=2 is 2nd minimum) ... based on the incomplete selection sort pseudocode """ n = len(x) for i in range(n): minIndex = i minValue = x[i] for j in range(i+1, n): ...
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def get_div_ids_by_level(divs, level): """ Returns a list of all div ids with level. """ if not isinstance(divs, list): divs = [divs] ids = [] for div in divs: if div['level'] == level: ids.append(div['id']) # no need to check subdivs cont...
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def new_admin(user, password_hasher): """ Create new admin user for testing. """ User = user # Admin user mock data admin_user_data = { "username": "admin", "email": "admin@email.com", "password": password_hasher.hash("admin"), } new_admin = User(**admin_user_data) ...
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import numpy as np def autocorr(a,v): """ Performs autocorrelation using the np.correlate in 'full' mode. Normalization has been added for keeping the values between -1,1 Inputs: a: Vector a; a 1D array only v: Vector b: a 1D array to be autocorrelated with a Outputs: cor...
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def clean_up_command_output(raw_command_data): """ clean up command output restructures the registered output data """ # initialize vrf command output vrf_command_output = [] # skip if no data available in the raw command data if 'results' not in raw_command_data: return vrf_command_ou...
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import six def flatten_content_tree(roots, depth=0): """ Transforms a tree into a list with ``indent`` as the depth of a node in the original tree. """ results = [] for key, values in six.iteritems(roots): elem, nodes = values elem.update({ 'path': key, ...
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