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def sqrt(n: int) -> int: """Gets the integer square root of an integer rounded toward zero.""" return int(n ** 0.5)
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def get_hello_user(name): """This method does blah blah.""" return 'Hello {}'.format(name)
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from datetime import datetime def _filter_pipelines_by_time(con, pipelines, days): """ Will return pipelines that are older than the number of days specified. """ # for each pipeline in pipelines we should get their builds # if the most recent build is older than $days old then we should add it to...
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from typing import Dict from typing import Tuple from typing import List import struct def vox_rgba_content( palette: Dict[ Tuple[int,int,int,int], int ] ) -> bytes: """Produces the content for the RGBA chunk, which contains the color palette for the entire scene. """ # While the palette contains at most 255 ...
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def join_path(a, *p): """Join path tokens together similar to os.path.join, but always use '/' instead of possibly '\' on windows.""" path = a for b in p: if len(b) == 0: continue if b.startswith('/'): path += b[1:] elif path == '' or path.endswith('/'): path += b else: path += '/' + b # END ...
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import os def make_video_list_file(root_dir, videos_path_list): # cSpell:disable """create a file for ffmpeg to use as a list of videos Args: videos_path_list (list(str)): the list with all the path to the videos """ # cSpell:enable video_list_file = open('video_list.txt', 'w+') v...
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def evaluate_rm_neg(prediction, ground_truth, none_label_index): """ Evaluation matrix. :param prediction: a dictionary of labels. e.g {0:[1,0],1:[2],2:[3,4],3:[5,6,7]} :param ground_truth: a dictionary of labels :return: """ # print '[None] label index:', none_label_index pos_pred = 0....
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def convert_diameter_sigma_to_fwhm(diameter): """ Converts a beam diameter expressed as the full with at half maximum (FWHM) to a beam diameter expressed as 2-sigma of a Gaussian distribution (radius = sigma). :arg diameter: 2-sigma diameter diameter. """ # d_{FWHM} = 1.177411 (2\sigma) ...
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def construct_exec_result(result, exec_result): """ Transform an ImpalaBeeswaxResult object to a QueryResult object. Args: result (ImpalaBeeswasResult): Tranfers data from here. exec_result (QueryResult): Transfers data to here. Returns: QueryResult """ # Return immedietely if the query failed....
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import re def get_row_data(key, row_data, column_names): """ Collects row data using column names while cleaning up anything after the _s """ data = [re.sub("_.*", "", key)] for column in column_names: data.append(row_data.get(column)) return data
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def table_from_fk(fks): """Get the table name of the fk constraint, ignoring the cordis_projects table Args: fks (:obj:`list` of SqlAlchemy.ForeignKey): All foreign keys for a given table. Returns: tablename (str): The table name corresponding to the non-Project foreign key. """...
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import sys def bytes_or_string(string): """Converts a string to bytes if we're using python3.""" if sys.version_info > (3,): return bytes(string, "latin-1") else: return string
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import gzip def write_fastq(filename): """ return a handle for FASTQ writing, handling gzipped files """ if filename: if filename.endswith('gz'): filename_fh = gzip.open(filename, mode='wt') else: filename_fh = open(filename, mode='w') else: filename...
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def intersection(set1, set2): """ Calculates the intersection size between two sets, used to compute overlap between a word context and a definition's signature. @param set1 - First set @param set2 - Second set @return Intersection size """ return len(set(set1) & set(set2))
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def groupby(keys, values): """Group values according to their key.""" d = {} for k, v in zip(keys, values): d.setdefault(k, []).append(v) return d
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def square_loss(a, b): """ Returns the value of L(a,b)=(1/2)*|a-b|^2 """ return 0.5 * (a - b)**2
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def is_filetype(filename: str) -> bool: """ Return true if fname is ends with .csv, .xlsx, or .xls. Otherwise return False. :filename: filename string Returns bool """ cfname = filename.lower() if cfname.endswith(".csv") and not cfname.startswith("pdappend"): return True ...
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def _calcFrame(parentFrame, posSize, absolutePositioning=False): """ Convert a vanilla posSize rect to a Cocoa frame. """ (pL, pB), (pW, pH) = parentFrame (l, t), (w, h) = posSize if not absolutePositioning: if l < 0: l = pW + l if w <= 0: w = pW + w - l ...
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from unittest.mock import call def send_keepalive(address, port): """ Tells the node to send a keepalive packet to address:port. :param address: http address :type address: str :param port: http port :type port: str or int :returns: empty dict :rtype: dict """ action = 'keepa...
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def fixture_uv_forecast(): """Return a /forecast response.""" return { "result": [{ "uv": 0, "uv_time": "2018-07-30T11:57:49.750Z", "sun_position": { "azimuth": -2.0081567900835937, "altitude": -0.011856950133816461 } ...
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from datetime import datetime def timestamp_to_str(timestamp: float, time_format: str) -> str: """转换时间戳为字符串格式 Args: timestamp: unix时间戳 time_format: 时间格式 Returns: 字符串描述的时间形式 """ datetime_ = datetime.fromtimestamp(timestamp) return datetime_.strftime(time_format)
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def _find_break_pos(txt, break_pos, allow_shift=2): """ 简单的函数,用来找合适的断行位置 allow_shift << break_len """ txt_len = len(txt) if txt[break_pos] == ' ': return 0, True for i in range(allow_shift): for shift in (i+1, -i-1): new_break_pos = break_pos + shift if ne...
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def monet_bool(data): """ returns "true" or "false" """ return ["false", "true"][bool(data)]
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def image_meta(system_metadata): """Format image metadata for use in notifications from the instance system metadata. """ image_meta = {} for md_key, md_value in system_metadata.items(): if md_key.startswith('image_'): image_meta[md_key[6:]] = md_value return image_meta
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def get_tech_installed(enduse, fuel_switches): """Read out all technologies which are specifically switched to of a specific enduse Parameter --------- enduse : str enduse fuel_switches : dict All fuel switches where a share of a fuel of an enduse is switched to a specif...
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def read_voltage_fast(pin): """ Returns the voltage of the pin passed in (between 0 and 5 Volts) It takes a single of measurement """ return 5.0 * pin.read()
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from datetime import datetime def containsAllData(entry): """ Ensures ICODrops entry contains all data needed to be stored """ return isinstance(entry["name"], str) \ and isinstance(entry["start"], datetime) \ and isinstance(entry["end"], datetime) \ and isinstance(entry["description"], str) \ and...
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def x_label(epoch_axis): """ Get the x axis label depending on the boolean epoch_axis. Arguments: epoch_axis (bool): If true, use Epoch, if false use Minibatch Returns: str: "Epoch" or "Minibatch" """ return "Epoch" if epoch_axis else "Minibatch"
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def filter_measurements(measurements, from_measurement, ignore_measurements): """Filter the list of measurements.""" if ignore_measurements: new_list = [] for m in measurements: if m not in ignore_measurements: new_list.append(m) measurements = new_list ...
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def feature_generation_cont(df, continous, target): """Continous Variables""" for i in range(len(continous)-1): var_1 = continous[i] var_2 = continous[i+1] # ratios df["ratio_"+str(var_1)+"_"+str(var_2)] = df[var_1].astype("float")/df[var_2].astype("float") #products df["prod_"+str(var_1)+"_"+str(var_2)...
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import ast def count_number_of_functions(filepath): """Count number of functions inside a .py file.""" # Taken from: https://stackoverflow.com/a/37514895/1274908 with open(filepath, "r+") as f: tree = ast.parse(f.read()) return sum(isinstance(exp, ast.FunctionDef) for exp in tree.body)
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import inspect def parse_comments(func): """ parse function comments First line of comments will be saved as summary, and the rest will be saved as description. """ doc = inspect.getdoc(func) if doc is None: return None, None doc = doc.split('\n', 1) if len(doc) == 1: ...
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import re def _verify_route_engine_status(output): """ Attempts to verify that RE0 has the mastership. Failure indicates either RE0 is missing or another RE has the master role. """ masterstatus = re.search(r'Current state.*(Master)',output) if masterstatus != None: return True else: ...
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def __tokenify(number): """ 生成随机验证字符串 :param number: :return: 随机验证字符串 """ token_buf = [] # char map 共64个字符 char_map = '1234567890abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ*$' remainder = number while remainder>0: token_buf.append(char_map[remainder&0x3F]) remainder = remainder // 64 return ''....
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import re def remove_whitespace(text): """removes # redundant/additional white space (incl. those from punctuation replacements)""" return re.sub(r'[\s]+', ' ', text)
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def fix_json_values(json_to_fix): """ Function to for making certain unavailable values more readable """ for k, v in json_to_fix.items(): if str(v) == "False": json_to_fix[k] = "No" if str(v) == "None": json_to_fix[k] = "Not Available" if str(v) == "True"...
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def chimie_control(data): """check that all needed oxides are there and setup correctly the Pandas datalist. Parameters ---------- data : Pandas dataframe the user input list. Returns ------- out : Pandas dataframe the output list with all required oxides. """ list_ox...
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def remove_at_index(lst, index): """ Creates a new list which is a copy of the input one with a single element removed from it """ removed = lst[:] del removed[index] return removed
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def _limit_stat_length(stat_length, shape): """limits the stat_length to current array length along given dimension.""" return tuple((min(stat_pair[0], shape[i]), min(stat_pair[1], shape[i])) for i, stat_pair in enumerate(stat_length))
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import sys def prefix_bits(byte_array, bits): """Return the first <bits> bits of a byte array as an integer.""" if sys.version_info < (3,): b2i = ord # In Python 2, indexing byte_array gives str else: b2i = lambda b: b # In Python 3, indexing byte_array gives int result = 0 ...
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import cProfile def profile(func): """Decorator for run function profile""" def wrapper(*args, **kwargs): profile_filename = func.__name__ + '.prof' profiler = cProfile.Profile() result = profiler.runcall(func, *args, **kwargs) profiler.dump_stats(profile_filename) retu...
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def early_stop(metrics, steps, min_improvement=0, higher_is_better=False): """Early stopping condition. Args: metrics: A list of metric values. steps: Consider the improvement over this many steps. min_improvement: Continue if the metric improved less than this value: higher_is_better: Whether a hi...
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def r19o(factor: float = 1) -> float: """ The outer size of the mounting rails of a 19-inch full rack giving it its name. """ return 482.6 * factor
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def decode_message(encoded_text, dictionary): """Decodes encoded text according to the given dictionary. Huffman encoded messages can be decoded only if we have the original dictionary that is used to encode the message. If the encoded message includes an unknown code function raises an error. Arg...
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def is_valid_variable(X,Y): """Given token (X) and variable (Y), make sure token fits variable's constraints.""" # - Positive constraints: break if mismatch found - if not(Y.constr_id == [] or (str(X.id) in Y.constr_id)): return False if not (Y.constr_lemma == [] or (X.lemma i...
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import collections def as_namedtuple(d): """return dictionary as a named tuple. """ return collections.namedtuple('GenericDict', list(d.keys()))(**d)
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def detail_line(e): """Given an expectation, return a readable one-line explanation of it.""" fields = [fname for fname in ('mutable', 'optional', 'volatile') if getattr(e, fname, None)] if e.depends_on: fields.append("depends_on=%s" % e.depends_on) line = ', '.join(fields) i...
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def group_by_phrase(docs_df): """ Takes a Pandas data frame with index=phrase, cols: num_occurrences as input, calculates the no. of unique and total occurrences of each phrase over the whole time period (a quarter) by grouping by phrase and aggregating on the column num_occurrences (sum and count). Th...
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def clamp(n, maxabs): """Clamp a number to be between -maxabs and maxabs""" return max(-maxabs, min(n, maxabs))
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def people_simple_raw(): """A one-person roster defined wrt the `config_simple` fixture.""" return [{ 'id': 'a', 'campus': 'Campus', 'cohort': 'People', 'schedule': { '2020-01-01': ['Block'], '2020-01-03': ['Block'] }, 'site_rank': ['Testin...
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def buildNodeParentDict(nl): """ Takes a node list and builds a dict of parents with child names as keys and parent names as values """ npd = {} for n in nl: for c in n.children: npd[c] = n.name return npd
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import random def mutation_single_customer_rerouting(vehicle, p1, quality, duration, setup_time, setup_cost, demand): """Re-routing involves randomly selecting one customer, and removing that customer from the existing route. The customer is then inserted in the best...
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import click def template(func): """ Set the value of a config template parameter in the form ``key=value``. Any instance of ``${key}`` in ``klio-job.yaml`` will be replaced with ``value``. """ return click.option( "-T", "--template", default=[], multiple=True, ...
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def parse_context_name(context_obj): """Parses context name from Dialogflow's contextsession prefixed context path""" return context_obj["name"].split("/contexts/")[1]
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def getTypeDict(fullDict, entityType): """ Expected Input: Full dictionary. EntityType tag to look up for each transaction_id. Expected Output: Dictionary filtered by entityType. """ typeDict = {} for key in fullDict.keys(): if(fullDict[key]["entity_type"] == entityType): typeDict[key] = fullDict[key] ret...
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def options2args(options): """Convert a list of command line options to a args and kwargs """ args = list() kwargs = dict() for a in options: if "=" in a: a = a.split("=", maxsplit=1) kwargs[a[0].lstrip("-")] = a[1] else: args.append(a) return args...
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def rename_variable(formula, old_name, new_name): """ Function that traverses the formula and changes the appearance of one variable. The renaming is done to the values of the id and field attributes. :param formula: Root node of the formula object :param old_name: Old variable name :param ...
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def selectSupportedKeyswitch(switchType): """ Returns footprint name of the supported switch, returns an error if not supported Returned object will have this form: { "lib_dir":"", "footprint_ref": "", } """ def selectMXParts(): ...
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def is_number(value): """Checks whether a string is a floating point number. This method checks whether a string is a floating point number by first removing any commas then attempting to cast the string to a float. If the cast fails, then return false. :param value: A string to evaluate. :returns...
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import os def read_file(filename): """ Read a file, if it exists. Otherwise return None """ if not os.path.exists(filename): return with open(filename, 'r') as fd: content = fd.read() return content
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import re import os def replace_all_image_path(text: str, image_path: str) -> str: """ # ![decision-tree-example](./decision-tree-example.png) """ pattern = r"\!\[(?P<imgname>.*?)\]\((?P<filepath>.*)\)" # print(re.findall(pattern, text)) text = re.sub(pattern, lambda m: '![{}]({})...
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def convert_list_to_string(org_list, seperator=' '): """ Convert list to string, by joining all item in list with given separator. Returns the concatenated string """ return seperator.join(org_list)
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import subprocess import re def check_cves(check_func=subprocess.check_output): """ Query the vulnerability updates available with yum Header: Loaded plugins... Columns: Advisory ID, reason/level, package name Footer: updateinfo list done """ update_string = check_func('sudo yum updateinfo list cves'.sp...
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def _pad_with_nulls(data, len_): """ Pad string with null bytes. Parameters ---------- data : str/bytes the string/bytes to pad len_ : int the final desired length """ return data + (b'\x00' * (len_ - len(data)))
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import subprocess def running_env(): """ Returns (str) git and (str) env git contains the git hash of the checked out code env is the various system information where this app is running """ ra_git_version = ( subprocess.run( ["git", "rev-parse", "HEAD"], captur...
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from pathlib import Path import sys def _get_env_flake8_fpath(): """ Perhaps we are in a virtual environment which hides flake8 from which / where commands. Worth a try. """ bin_path = Path(sys.executable).parent flake8_fpath = str(bin_path / 'flake8') return flake8_fpath
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def handle_re(ctx, c1, c2, str1='none'): """ RegEx-based router, catching goups and named groups """ print("Hello from RE-base route ") return "Handling RE route %s|%s|%s !" % (c1, c2, str1)
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def generated_tag_data(tags): """Convert :obj:`dict` to S3 Tag list. Args: tags (dict): Dictonary of tag key and tag value passed. Returns: list: List of dictionaries. """ generated_tags = [] for key, value in tags.items(): generated_tags.append({ 'Key': ke...
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def fitness(individual, problem): """ Score the fitness of an indivdual based on a MAXSAT problem. :param individual: An "individual" represented as an array :param problem: MAXSAT problem to compute fitness in ref to, usually stored as global MAXSAT_PROBLEM :return: An int representation of ind...
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import re def extract_port_range(address): """ We additionally allow for setting a port range in rectangular brackets: tcp://127.0.0.1:[50100:50120] """ range_pattern = re.compile(r"(?P<addr>.*?):\[(?P<port_min>\d+):(?P<port_max>\d+)\]") random_pattern = re.compile(r"(?P<addr>.*?):\*") por...
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def comp_height_wire(self): """Return wire diameter Parameters ---------- self : CondType12 A CondType12 object Returns ------- W: float Wire diameter [m] """ return self.Wwire
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def is_excluded(path, dirs): """ if path is excluded in list of dirs/files :param path: path to check for exclude :param dirs: list of excludes :return: Boolean """ for directory in dirs: if path.startswith(directory): return True return False
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import random def greetings(): """ Returns a random greeting from list """ greetings = ["Hello, how are you? ", "Hi, how are you?", "Hi, lovely day, right? How are you? ", "Ah, my friend! How are you? ", "Hey fella, You good? ", "Hey, my old friend, how...
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def sphere_function(vals): """ A very easy test function Parameters: vals - a list specifying the point in N-dimensionsla space to be evaluated """ return sum(val**2 for val in vals)
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def _filter_statements(stmts_in, ns, ag_id, role=None): """Return statements filtered to ones where agent is at given position.""" # Make sure the role is good. assert role in ['SUBJECT', 'OBJECT', None], \ "The value of role must be either 'SUBJECT', 'OBJECT', or None." # Map the role to an in...
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import re def is_domain(domain: str) -> bool: """Makes sure domain is valid with proper format.""" # Make sure domain is specified as proper type if not domain or type(domain) is not str: return False # Define regex for domain validation domain_regex = r'[a-z0-9]+([a-z0-9\-]+\.)+([a-z]+[...
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def binarySearch(array, target): """ Devuelve la posicion del elemento "target" si se encuentra en el array, caso contrario devuelve -1 """ left = 0 right = len(array) - 1 while left <= right: mid = int(left + (right - left) / 2) if array[mid] == target: return mid if array[mid] < target: ...
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def doubles(source: str) -> str: """Returns the source without double characters.""" destination = [] for c in source: if destination and destination[-1] == c: destination.pop() else: destination.append(c) return ''.join(destination)
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import os def walkfiles(folder, suffix=''): """Iterator over files in folder, recursively.""" return ( os.path.join(basename, filename) for basename, dirnames, filenames in os.walk(folder) for filename in filenames if filename.endswith(suffix) )
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def rearrange_name(s: str) -> str: """Converts last, first to first last Args: s (str): the original string Returns: str: the standardized string """ return ' '.join(reversed([i.strip() for i in s.split(', ')]))
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def int_pow(x: float, exponent: float) -> int: """Finds the nearest integer to ``pow(x, exponent)``. Args: x: The number whose power will be found. exponent: The number to which ``x`` will be raised. Returns: The result of rounding ``pow(x, exponent)`` to the nearest integer. "...
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def mock_moira(mocker): """Return a fake mit_moira.Moira object""" return mocker.patch("moira_lists.moira_api.Moira")
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def _trapz_simps_overlap2(dy, dx): """Correction term in the squared error when combining trapezoidal and Simpson's rule. Only exact for equal spacing *dx* left and right of *dy*. err^2 = (h/6)^2 ((3 Df0)^2 + ((3+2)Df1)^2 + (8Df2)^2 + (4Df3)^2 + ...) |-- trapz ---| |--------- Simpson...
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import ast def _safe_eval(node, default): """ Safely evaluate the Boolean expression under the given AST node. Substitute `default` for all sub-expressions that cannot be evaluated (because variables or functions are undefined). We could use eval() to evaluate more sub-expressions. However, this...
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def percentage(context, num, total_num): """ Works out the percentage of num over total_num and then appends the percentage sign """ p = float(num)/float(total_num) * 100 percent = str(p) + "%" return percent
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def escape_pw_for_look(string): """ escape a password for look cmd """ string = string.replace("\\", "\\\\") string = string.replace('"', '\\"') string = string.replace("'", "\\'") return string
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def get_os_distro(): """Returns a string of OS distribution. Since we are using Docker, this function only considers Linux distribution. Alternative files on Linux: /etc/os-release, /etc/lsb-release As a matter of fact, "/etc/issue" doesn't exist on Mac OS X. We can use "sw_vers" command to find it...
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def mktag(tagname, tagclass='', inner=None, tag_params=None): """ generates tag: <tagname * > or if tag_params dict passed <tagname * >inner</tagname> * tagclass or if tag_params dict passed will be overloaded by tag_params['class'] <tagname param1="value1" param2="value2" ...> """ ...
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def bdev_nvme_set_options(client, action_on_timeout=None, timeout_us=None, timeout_admin_us=None, keep_alive_timeout_ms=None, retry_count=None, arbitration_burst=None, low_priority_weight=None, medium_priority_weight=None, high_priority_weight=None, ...
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import json def update_json(row, fields): """Add data to the taxon_json field.""" taxon_json = json.loads(row.taxon_json) for field in fields: if row[field]: taxon_json[field] = row[field] return json.dumps(taxon_json, ensure_ascii=False)
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def fix_ambiguous_cl(column=4): """awk command to replace non-N ambiguous REF bases with N. Some callers include these if present in the reference genome but GATK does not like them. """ return r"""awk -F$'\t' -v OFS='\t' '{if ($0 !~ /^#/) gsub(/[KMRYSWBVHDXkmryswbvhdx]/, "N", $%s) } {print}'""" % ...
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def make_list(nb_letters): """Makes the list of words. Args: nb_letters (int): number of letters in the words of the list Returns: list: the list of words """ words_list = [] # Open the file that contains the words with the required number of letters with open(f'data/mots_{nb...
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def get_travel_requests_of_timetables(timetables): """ Retrieve a list containing all the travel_request_documents, which are included in a list of timetable_documents. :param timetables: [timetable_documents] :return: travel_requests: [travel_request_documents] """ travel_requests = [] ...
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def number_vowels(w): """ Returns: number of vowels in string w. Vowels are defined to be 'a','e','i','o', and 'u'. 'y' is a vowel if it is not at the start of the word. Repeated vowels are counted separately. Both upper case and lower case vowels are counted. Examples: number...
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import sys import select import os def read_available_bytes(file=sys.stdin, chunk_size=4096): """ Read all available data from f in chucks of chunk_size returning a byte array or None if nothing read. """ buffer = b'' while True: read_list, _, exception_list = select.select([file], [], [file],...
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import sys import traceback def as_string(msg, unixfrom=False): """Convert a Message object to a string in a safe-ish way. In email pkg version 2.5.4 and earlier, msg.as_string() can raise TypeError for some malformed messages. This catches that and attempts to return something approximating the ori...
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def docker_command(command): """Format command as needed to run inside your db docker container. :param str command: postgres command :return: Terminal command :rtype: str """ # Template for executing commands inside the db container command_template = 'docker-compose exec -T db psql ' \ ...
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def div_by_nums(i, nums): """ Test if number (i) is divisible by array of numbers (nums) :param i: :param nums: :return: """ for n in nums: if i % n == 0: return True return False
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from typing import Any from pydantic import BaseModel # noqa: E0611 from enum import Enum async def clean_python_types(data: "Any") -> "Any": """Turn any types into MongoDB-friendly Python types. Use `dict()` method for Pydantic models. Use `value` property for Enums. Turn tuples and sets into lists...
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def temporal_affine_forward(x, w, b): """ Inputs: - x: Input data of shape (N, T, D) - w: Weights of shape (D, M) - b: Biases of shape (M,) Returns a tuple of: - out: Output data of shape (N, T, M) - cache: Values needed for the backward pass """ N, T, D = x.shape M = b.shap...
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