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def atom(draw): """ atom: '(' [testlist] ')' | '[' [testlist] ']' | '{' [dictmaker] '}' | '`' testlist '`' | NAME | NUMBER | STRING """ #'(' [testlist] ')' | '[' [testlist] ']' | '{' [dictmaker] '}' | '`' testlist '`' | NAME | NUMBER | STRING return ''
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import os def ext(path): # type: (str) -> str """ /dir1/dir2/file.ext.txt -> .txt /dir1/dir2/ -> """ return os.path.splitext(path)[1]
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def obj_type(key): """If it is a 'dir' it will end with a slash otherwise it is a 'file' """ if key[-1:] == '/': return 'directory' else: return 'file'
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def hg(server, cmd_string): """Runs a Mercurial command through the given command server. """ server.run_command(cmd_string) text, exit_code = server.receive_data() return text, exit_code
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def enthalpyVaporization(T, eVP): """ enthalpyVaporization(T, eVP) enthalpyVaporization (kJ/mol) = A*(1-T/critT)^n Parameters T, temperature in Kelvin eVP, A=eVP[0], critT=eVP[1], n=eVP[2] A and n are regression coefficients, critT: critical temperature Returns ent...
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def metricresample(metric, samples): """ Resample a metric vector using random resamples computed using indexresample. Parameters: - - - - - metric: array of scalar values describing mesh samples: indices to sample from """ resamples = metric[samples] return resamples
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def get_reader_pairs(reader): """Return the set of alphabetically-sorted word (str) tuples in `reader` """ return {tuple(sorted([w1, w2])): score for w1, w2, score in reader()}
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from typing import Callable def _node_not_implemented(node_name: str) -> Callable[..., None]: """ Return a function that raises a NotImplementedError with a passed node name. """ def f(self, *args, **kwargs): raise NotImplementedError(f"'{node_name}' nodes are not implemented") return f
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def sorted_options(options): """Sort a sequence of options into canonical order. Return a list with the same elements as *options* sorted using the option :attr:`number<UrOption.number>` as the key. The sort is stable: options with the same number remain in their original order. This operation is...
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def gcd_r(a: int, b: int) -> int: """recursive greatest common divisor :param a: :param b: .. doctest:: python >>> from pupy.maths import gcd_it >>> from pupy.maths import gcd_r >>> gcd_it(1, 4) == gcd_r(1, 4) True >>> gcd_it(2, 6) == gcd_r(2, 6) True ...
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import os import glob import yaml def read_yaml_snippets(args): """Reads and parses yaml snippets under `release-notes.d` directory Args: args (Namespace): Parsed command line attributes Returns: dictionary: A dictionary consists of a new release notes item generated from ...
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def GenerateLibraryDescription(lib_name): """Generates a library description consisting of its full name and version. Args: lib_name: The name of the library for which a description is to be generated. Returns: A string description of the given library. """ tmp_lib = __import__('adspygoo...
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from typing import Counter def term_freq(tokens) -> dict: """ Takes in a list of tokens (str) and return a dictionary of term frequency of each token (doc = a list of tokens) """ #counting occurrences of each unique token term_count = Counter(tokens) #total number of tokens n_tokens = ...
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def inverseTransform(tran): """ An SVG transform matrix looks like [ a c e ] [ b d f ] [ 0 0 1 ] And it's inverse is [ d -c cf - de ] [ -b a be - af ] * ( ad - bc ) ** -1 [ 0 0 1 ] And, no reasonable 2d coordi...
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def element(a): """ Return the element """ return a.GetSymbol()
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def dataRange(data): """ This is used to find the range of a set of data. The range is the difference between the lowest and highest valued digits in a given set of data.""" data = data data.sort() return data[len(data)-1] - data[0]
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def get_class_plural_name(cls): """Convert class name to it's plural form""" base = cls.__name__.lower() for ending in ('s', 'z', 'x', 'ch', 'sh'): if base.endswith(ending): return base + 'es' if base.endswith('y'): return base[:-1] + 'ies' else: return base + 's'
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def drop_col(df, col): """ If a pandas.DataFrame has a particular column, drop it. args ---- df : pandas.DataFrame col : str returns ------- pandas.DataFrame, same DataFrame without column """ if col in df.columns: df = df.drop(col, axi...
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def read_day(sheet,start,num_of_groups,day=1): """ :param sheet: передается страница :param start: передается левый верхний угол ячейки дня :param day: если первый день в неделе - передается двойка :return: вощзращается список структур из данных ячеек """ def check_merge(sheet,row,column): ...
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def print_deps_stdout_arg(request): """Argument for printing deps to stdout""" return request.param
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def read_map_file(file_name): """ reads a map file generated by TI's ARM compiler. the function expects a file of a form similar to: . . . GLOBAL SYMBOLS: SORTED BY Symbol Address address name ------- ---- 00000000 __TI_static_base__ 00000000 g_pfnVectors 00000200 __S...
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import argparse def add_data_args(parser: argparse.ArgumentParser): """Train/valid/test data arguments.""" group = parser.add_argument_group('data', 'data configurations') group.add_argument('--model-parallel-size', type=int, default=1, help='size of the model parallel.') group...
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from typing import Union from typing import List def process_dorms(dorms: Union[str, None] = None, size: Union[int, None] = None, default_dorm: str = 'Unknown', dorm_separator: Union[str, None] = None) -> List[List[str]]: """Process the dorms. Args: ...
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def N_bar(tree): """ Returns the $\bar{N}$ statistic: the average number of nodes above a terminal node. """ leaf_count = 0 nbar = 0 for leaf_node in tree.leaf_node_iter(): leaf_count += 1 for parent in leaf_node.ancestor_iter(inclusive=False): nbar += 1 retur...
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def osm_area_sql(grid, osm, cat): """ Returns a sql fragment that sums the total area by category of a grid cell coverd by OSM polygon features Args: grid (string): a PostGIS table name containing the grid osm (string): a PostGIS table name containing the OSM polygon features ca...
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import os def rmkdir(path): """Method creates directory Args: path (str): directory path Returns: bool: result Raises: exeception: Exception """ result = False if path != '' and not os.path.exists(path): try: os.makedirs(path) retur...
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import re def multiple_capture(pattern, string): """ capture from first match for a multi-capture pattern """ match = re.search(pattern, string, flags=re.MULTILINE) return match.groups() if match else None
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from typing import Any def get_record_code(record: dict[str, Any]) -> str: """Returns the concatenated codes for a taric record.""" return f"{record['record_code']}{record['subrecord_code']}"
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import requests from bs4 import BeautifulSoup def get_soup(request, element, class_value): """ Uses the BeautifulSoup library to retrieve the HTML text for a given webpage request. :param request: The webpage request for which the HTML text is to be retrieved. :param element: The element of the webpag...
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def clear_lines(black_white_image): """清除单像素点干扰线 原理:上下两个点或左右两个点为异色,则该点属于干扰线的点 :param black_white_image: 黑白二值图 :return: image """ for x in range(1, black_white_image.size[0] - 1): for y in range(1, black_white_image.size[1] - 1): pix = black_white_image.getpixel((x, y)) ...
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def _write_url_file(images, separator=" "): """ ImageNet generally uses a specific format to store the URLs of images. This converts a set of images into this format. Args: images: The set of images to write. It should contain tuples with image WNIDs and URLs. separator: Default string used to separat...
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import os def at_root(*args): """ Return path relative to formasaurus source code """ return os.path.join(os.path.dirname(__file__), *args)
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import pathlib from typing import Union def _should_granule_be_processed( filename: str, save_dir: pathlib.Path, order_number: Union[str, int] ) -> bool: """ Return True iff the given granule should be processed (i.e. has not yet been saved) Args: filename (str): Name of the granule `.h5` fil...
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import os import gzip import json def load_playback_file(filename): """Load a gzip json playback file.""" cur_fp = os.path.realpath(__file__) cur_dir = os.path.dirname(cur_fp) fp = os.path.join(cur_dir, "mocks", filename) with gzip.open(fp, "rb") as fh: content = fh.read().decode("utf-8") ...
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def logamp_structure(logamp_a, logamp_b, axis=-1): """Structure function for log-amplitude fluctuations. See Daigle, equation 17. """ return ((logamp_a-logamp_b)**2.0).mean(axis=axis)
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def catch(func, handle=lambda e: e, *args, **kwargs): """Helper function to enable the list comprehension in xmltolist. Whenenver a data field doesn't have an entry, put an empty string. cf. http://stackoverflow.com/a/8915613 """ try: return func(*args, **kwargs) except KeyError: ...
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def _merge_keys(dicts): """Return the union of the keys in the list of dicts.""" keys = [] for d in dicts: keys.extend(d.keys()) return frozenset(keys)
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def is_list_of_dict(value): """ Check if value is a non-empty list of dictionaries """ return isinstance(value, list) and len(value) > 0 and all(isinstance(elem, dict) for elem in value)
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def nav_active(context, item): """ Returns 'active' is item is the active nav bar item, and '' otherwise. """ default = '' try: url_name = context['request'].resolver_match.url_name except: return default if url_name == item: return 'active' return default
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from typing import IO from typing import Any from pathlib import Path def containing_directory(file_object: IO[Any]) -> Path: """Return the directory containing the given file.""" return Path(file_object.name).parent.absolute()
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def _mm_multiply(A, B): """calculate the product of two matrices A, B""" mA, nA = len(A), len(A[0]) #number of rows, cols in A mB, nB = len(B), len(B[0]) #number of rows, cols in B C = [] if nA != mB: print('Matrix multiplication was not performed: invalid dimensions') return None ...
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import re def GetVersion(path): """Get the version of this python tool.""" version_str = 'XWalk packaging tool version ' file_handle = open(path, 'r') src_content = file_handle.read() version_nums = re.findall(r'\d+', src_content) version_str += ('.').join(version_nums) file_handle.close() return vers...
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import argparse def parse_cmdline(): """Child worker command line parsing""" parser = argparse.ArgumentParser(description='Remote runner parser') parser.add_argument('--address', action="store") parser.add_argument('--index', action="store") parser.add_argument('--testplan', action="store") pa...
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def index(): """RETURN: landing page message.""" return "PuPPy API is live!"
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def getLeaves(ob, pre=""): """ getLeaves tree, returns dictionary mapping paths from root to leafs to value of leafs """ return ob._getLeaves(pre)
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import torch def sample_symmetric(dim, mean=0, std=10, **kwargs): """generate a random symmetric matrix with a particular eigenvalue distribution""" # sample random orthogonal matrix (uniformly) Q, R = torch.linalg.qr(torch.randn(dim, dim, **kwargs)) Q.mul_(R.diagonal().sign().view(1, -1)) # ...
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import os import pickle def get_aaindex(index_list): """Get the aaindex from data/aaindex.data. :param index_list: the index we want to get. :return: a list of AAIndex obj. """ new_aaindex = [] full_path = os.path.realpath(__file__) file_path = "%s/data/aaindex.data" % os.path.dirname(ful...
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from pandas import DataFrame def make_df_statistics(cv_results): """Return results from `calculate_statistics` into a DataFrame""" metrics = [ 'accuracy_score', 'precision_score', 'recall_score', 'specificity_score', 'f1_score', 'f2_score', 'geometric_mean_score', 'matthews_corrcoef', ...
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import re def find_ip(url): """ Find IP address in string (code from dusty 1.0) """ ip_pattern = re.compile('\d{1,3}\.\d{1,3}\.\d{1,3}\.\d{1,3}\s') # pylint: disable=W1401 ip_value = re.findall(ip_pattern, url) return ip_value
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from typing import List def l2s(inputs: List) -> List[str]: """ Transforms a list into list of strings. :param inputs: objects :return: list of str(object) """ return [str(inp) for inp in inputs]
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import argparse def default_argument_parser(): """ Create a parser with some common arguments used by detectron2 users. Returns: argparse.ArgumentParser: """ parser = argparse.ArgumentParser(description="ObjectDetection2 Training") parser.add_argument("--test_dir", default="/2_data/wj...
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def find_components(graph): """ breadth first search graph traversal algorithm """ connected_components = [] vertices = list(graph) while vertices: start_node = vertices.pop() queue = [start_node] visited = [start_node] while queue: node = queue.pop(0) ...
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def doc_modifier(doc): """ """ return doc.replace( 'delay_shift (bool, optional): flag to simulate spike propagation ' 'delay from one layer to next. Defaults to True.', 'delay_shift (bool, optional): flag to simulate spike propagation ' 'delay from one layer to next. Default...
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def readIdentificationFile(infile, sep="\t"): """ read lines from a peptide identification file and store the column split version of those lines (without header) in a list. (return: list of peptide identifications as list of identification ) infile: file containing identification lines (like output of I...
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from typing import Dict def parse_node_id(node_id: str) -> Dict: """ 解析节点ID :param node_id: 节点ID "host|instance|host|123" :return: { "object_type": "HOST", "node_type": "INSTANCE", "type": "host", "id": 123, } """ object_type, node_type, _type, _id = node_id...
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def intsqrt(x): """ Return the largest integer whose square is less than or equal to x. """ if x == 0: return 0 # invariant: l^2 <= x and x < r^2 l = 1 r = x while r-l > 1: m = l + (r-l)//2 s = m*m if s <= x: l = m else: r =...
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def _convert12(model): """ Converts a model from JMI type 1 to JMI type 2. """ # Convert array to object results = {} for element in model: results[element['id']] = element # Update contains field if needed if 'contains' not in element.keys(): element['contai...
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import sys import time import logging def timed(func): """ Decorator used to benchmark function runtime""" def wrapped(*arg, **kwarg): target_base_name = sys.argv[0] # target_base_name = os.path.basename(__file__).split(".")[0].capitalize() target_function_name = func.__name__ ...
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def _rchild(i): """ Returns the right child node of the given node. """ return 2 * i + 2
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def make_list(string): """Make a list of floats out of a string after removing unwanted chars.""" l1 = string.strip('[] \n') l2 = l1.split(',') return [float(c.strip()) for c in l2]
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import os def executable(path): """Test for executable file.""" return os.access(path, os.X_OK)
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def reverse_and_complement(sequence): """Get the reversed and complemented form of `sequence`. Returns a string that is the reversed and complemented sequence of `sequence`. If `sequence` is empty, an empty string is returned. """ #Convert all rna_sequence to upper case: sequence=sequence....
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def _bcIsForVectorValues(bc, mesh): """Guess if boundary condition is supposed to be for vector valued problems """ verbose=False def testForV3(t): if verbose: print("test for v3", t) try: if callable(t): test = t(mesh.boundary(0)) els...
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def watermelon(weight): """ Check condition. """ if weight % 2 == 0 and weight > 2: return "YES" return "NO"
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def ansible_playbook_options(): """ Lists the options available for ansible-playbook """ ansible_options = [ "--ask-become-pass", "--ask-pass", "--ask-su-pass", "--ask-sudo-pass", "--ask-vault-pass", "--become", "--become-method", "--become-user", "--check", "--connection", "--d...
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def vcross(self, labxr="", labyr="", labzr="", labx1="", laby1="", labz1="", labx2="", laby2="", labz2="", **kwargs): """Forms element table items from the cross product of two vectors. APDL Command: VCROSS Parameters ---------- labxr, labyr, labzr Label assigned to X, Y, and Z-...
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import hashlib def sign(params, api_key): """ signature api :param params: [(`class`:`str`, `class`:`object`)] :return: `class`:`str` """ params = [(key, value) for key, value in params if value] params = sorted(params, key=lambda param: param[0]) temp = u'&'.join([u'{0}={1}'.format(ke...
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def get_last_lines_from_file(file_localtion, x=50): """ returns an array of the last x lines of a file """ with open(file_localtion, "r") as the_file: lines = the_file.readlines() last_lines = lines[-x:] return last_lines
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import time import logging def time_it(func): """ Measures time """ def wrap(*args, **kwargs): time1 = time.time() ret = func(*args, **kwargs) time2 = time.time() final_time = time2 - time1 mins, secs = divmod(final_time, 60) logging.info(f"{func.__name...
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import os def save(mail, name=None, target_path=None, overwrite=False) -> bool: """Save a mail.""" if name is None: name = str(mail['subject'] + '.eml') if mail.get('subject') else 'Untitled' if target_path is None: target_path = os.getcwd() file_path = os.path.join(target_path, name...
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def memoized_triple_step(step): """Find number of step combinations for maximum of three steps at a time :param step Number of steps left :return Number of step combinations """ if step < 0: return 0 elif step == 0: return 1 return memoized_triple_step(step - 3) + \ ...
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def subs_op_args(expr, args): """ Substitute Operator argument values into an expression. `args` is expected to be as produced by `Operator.arguments` -- it can only contain string keys, with values that are not themselves expressions which will be substituted into. """ return expr.subs({i.n...
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def standardized_api_list(component): """ Convert result dict to list just to have standardized API """ keyword = 'componentResults' if (not isinstance(component, dict) or keyword not in component or not component[keyword]): return component # Remove reference, ...
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def get_action(mod_line): """Function to return the type of action requested by the user for a given module, using the pavilion configuration syntax. The string can be in one of three formats: 1) '[mod-name]' - The module 'mod-name' is to be loaded. 2) '[old-mod-name]->[mod-name]' - The...
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import os def checking_scraping_allowance(robot_file, url_sub_category): """ Check if it is allowed to scrap the subcategory of a url Arguments : url to robot.txt file url subcategory Return : Boolean True/False """ robot_res = os.popen(f'curl {robot_file}').read() auth_r...
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def calculate_rent( product_price: float, minimum_rent_period: int, rent_period: int, discount_rate: float = 0, ) -> float: # noqa E125 """Calculate product rent over period NOTE: "Rent is calculated by mult...
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import yaml from typing import Any def string_as_block(dumper: yaml.Dumper, data: str) -> Any: """string_as_block uses YAML's block style for strings with newlines.""" if "\n" in data: return dumper.represent_scalar("tag:yaml.org,2002:str", data, style="|") return dumper.represent_scalar("tag:yaml...
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def qualified_name_tuple(cls): """ Get the module name and the thing-name for a class. e.g. ('instakit.processors.halftone', 'FloydSteinberg') """ mod_name = getattr(cls, '__module__') cls_name = getattr(cls, '__qualname__', getattr(cls, '__name__')) return mod_name, cls_name
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def recursive_node_count(sll): """Solution to exercise R-7.3. Describe a recursive algorithm that counts the number of nodes in a singly linked list. """ def recurse(node, count): if node is None: # Base case, found tail of linked list return count return recurse(node....
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def with_lock(lock, fn): """ Call fn with lock acquired. Guarantee that lock is released upon the return of fn. Returns the value returned by fn, or raises the exception raised by fn. (Lock can actually be anything responding to acquire() and release().) """ lock.acquire() try...
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def dailyLow (lowTemps, date): """Finds the low temperature for date in question. .. warning: Assumes date has been validated using dateValidation and that data exists for date in question using dataAvailable. :param list lowTemps: Low temperatures for given month :param date: Date (Mo...
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def byte_to_gb(byte): """Convert bytes to GB""" return byte / (1024.0 * 1024 * 1024)
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def merge(line): """ Helper function that merges a single row or column in 2048 """ r1 = [0] * 4 r2 = [] pos1, pos2 = 0, 0 score = 0 for num in line: if num != 0: r1[pos1] = num pos1 += 1 while len(r1) > 1: if r1[pos2] == r1[pos2 + 1]: ...
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import argparse def _parse_args(): """Parses command line arguments""" parser = argparse.ArgumentParser(description='Template file') parser.add_argument( 'required', help='an example required argument') return parser.parse_args()
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def accesskey(request): """Get the accesskey from command line. Arguments: request: Gives access to the requesting test context. Returns: A accesskey from command line. """ return request.config.getoption("--accesskey")
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import time import os def pick_seed(): """Returns a seed for a random number generator selected using a mixture of the current time and the current process ID.""" return int(time.time()) ^ (os.getpid() << 16) & 0xffffffff;
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import os def count_filedirs(dirname): """Counts the number of directories and files in a given directory. Counts recursively. dirname must be readable. Returns: nb of directories nb of files This is somewhat the equivalent of: find ./smali -type d -print or -type f """ asser...
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def b2b_ipv4_devices(b2b_raw_config, tx_port, rx_port): """Returns a list of ipv4 tx device and rx device objects Each device object is ipv4, ethernet and vlan """ tx_device, rx_device = b2b_raw_config.devices.device().device() tx_device.name, rx_device.name = "Tx Devices Ipv4", "Rx Devices Ipv4" ...
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def normalize_vartype(vartype): """Return the canonical form for a variable type (or func signature).""" # We allow empty strring through for semantic reasons. if vartype is None: return None # XXX finish! # XXX Return (modifiers, type, pointer)? return str(vartype)
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from typing import Dict def timestamp_as_number_formatter(row: Dict, field: str): """ Useful for JQGrids where we want to send down time as a timestamp so we can put it in the user's timezone :param row: JQGrid row object :param field: field to access row (row[field] should be a timestamp) :return...
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def sign_extend(val, bits=32): """ Sign extension. High-order bit of val is left extended. :param val: VexValue """ sign_bit = 1 << (bits - 1) return (val & (sign_bit - 1)) - (val & sign_bit)
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import time def new_time(): """Create a _new_ time stamp. This method also makes sure that after retrieving a timestamp that was *before* a transaction was committed, that at least one second passes so the packing time actually is before the commit time. """ now = anew_time = time.time() ...
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def safe_union_two_by_name(df1, df2): """Combine common fields from two dataframes rowwise. Note we do not use the ``pyspark.sql.DataFrame.unionByName`` function here because we explicitly reorder columns to the order of ``take``. Parameters ---------- df1 : pyspark.sql.DataFrame f...
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import os def parse_input(): """ Ask user input for input images: pass path to individual images, directory """ out = [] while True: ins = input("Enter path (q to quit):").strip() if ins in ["q", "quit"]: break if not os.path.exists(ins): print("Erro...
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import yaml def load_config(): """ Loads the config from config.yaml :returns: Dict of loaded config.yaml :rtype: dict """ with open("config.yaml", "r") as _file: return yaml.load(_file, Loader=yaml.FullLoader)
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from typing import Tuple from typing import List def process_train_val_file(cfg)-> Tuple[List[str], List[str]]: """ """ train_file = cfg.data.train_split_file val_file = cfg.data.val_split_file with open(train_file) as f: train_lines = f.readlines() for i in range(len(train_lin...
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def is_assignment_processed(db_conn, assignment): """ Gets all global ids in the database :param db: (string) The database to query :return: List<string> The global ids in the db """ c = db_conn.cursor() c.execute("SELECT GlobalID from assignments where GlobalID=?", (assignment.global_id,)) ...
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def return_list( incoming) -> list: """ Checks to see if incoming is a String or a List. If a String, adds the string to a list and returns. """ url_list = [] if isinstance(incoming, str): url_list.append(incoming) elif isinstance(incoming, list): url_list = incoming ...
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import os def os_pathsep(value): """ Returns the appropriate path separator based the given value and the host OS. """ if os.name != "nt": # Unix return ':' if ':' in value else ';' else: # Windows return ';'
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def make_array(n): """Take the results of parsing an array and return an array Args: n (None|list): None for empty list list should be [head, [tail]] """ if n is None: return [] else: return [n[0]] + n[1]
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