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def get_required_webots_version(): """Return the Webots version compatible with this version of the package.""" return 'R2020b revision 1'
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def ScoreStatistics(scores, percentile): """ Capture statistics related to the gencall score distribution Args: scores (list(float)): A list of gencall scores percentile (int): percentile to calculate gc_10 : 10th percentile of Gencall score distribution gc_50 : 50th...
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def download_drill(load=True): # pragma: no cover """Download scan of a power drill. Originally obtained from Laser Design. Parameters ---------- load : bool, optional Load the dataset after downloading it when ``True``. Set this to ``False`` and only the filename will be returne...
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def schlieren_colormap(color=[0, 0, 0]): """ Creates and returns a colormap suitable for schlieren plots. """ if color == 'k': color = [0, 0, 0] if color == 'r': color = [1, 0, 0] if color == 'b': color = [0, 0, 1] if color == 'g': color = [0, 0.5, 0] if c...
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def evaluate_binned_cut(values, bin_values, cut_table, op): """ Evaluate a binned cut as defined in cut_table on given events Parameters ---------- values: ``~numpy.ndarray`` or ``~astropy.units.Quantity`` The values on which the cut should be evaluated bin_values: ``~numpy.ndarray`` or...
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def add_EVM(final_update, wd, consensus_mapped_gff3): """ """ db_evm = gffutils.create_db(final_update, ':memory:', merge_strategy='create_unique', keep_order=True) ids_evm = [gene.attributes["ID"][0] for gene in db_evm.features_of_type("mRNA")] db_gmap = gffutils.create_db(consensus_mapped_gff3,...
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def validate(schema): """Validate the schema Validations performed: Values of default data (if any) Existence of dynamic modules Enums keyed by string value Args: schema (pkcollections.Dict): app schema """ sch_models = schema.model sch_enums = schema.enum s...
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def smartCheck(policy_del, policy_add, list_rules_match_add=None, matched_rules_extended=None, subpolicy=False, print_add_matches=False, print_progress=False, DEBUG=False): """ smartCheck will compare two policies trying t...
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def _write_training_dataset_hdfs_hdf5(df, write_mode, path, training_dataset): """ Writes a dataframe of data as a training dataset on HDFS in the hdf5 format Args: :df: the dataframe to materialize :path: the hdfs path where the dataframe will be materialized :write_mode: spark wri...
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def generator(samples, batch_size=32, is_training=True): """ Lazy batch train/validation generator for memory efficiency """ num_samples = len(samples) #vertical, horizontal range for random translation x_translate_range = 100 y_translate_range = 10 while 1: # Loop forever so the gener...
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def test_tuning_transm(): """Function to test the tuning function.""" tunning_function('transm')
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def create_volume(cinder, size, name=None, image=None): """Create cinder volume. :param cinder: Authenticated cinderclient :type cinder: cinder.Client :param size: Size of the volume :type size: int :param name: display name for new volume :type name: Option[str, None] :param image: Ima...
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def function_linenumber(function_index=1, function_name=None, width=5): """ :param width: :param function_index: int of how many frames back the program should look (2 will give the parent of the caller) :param function_name: str of what function to look for (should not be used with function_index ...
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def get_event_times( data: np.ndarray, kernel_size: int = 71, skip_first: int = 20 * 60, th: float = 0.1, abs_val: bool = False, shift: int = 0, debug: bool = False, ) -> Tuple[list, list]: """ Given a 1D time serires it gets all the times there's a new 'stimulus' (signal going >...
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def setup_persistent_monitoring(): """ Change monitoring backend to OCS """ sc = helpers.default_storage_class(interface_type=constants.CEPHBLOCKPOOL) # Get the list of monitoring pods pods_list = get_all_pods( namespace=defaults.OCS_MONITORING_NAMESPACE, selector=["prometheus",...
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def init_base_item(mocker): """Initialize a dummy BaseItem for testing.""" mocker.patch.multiple( houdini_package_runner.items.base.BaseItem, __abstractmethods__=set(), __init__=lambda x, y: None, ) def _create(): return houdini_package_runner.items.base.BaseItem(None) ...
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def create_sftp_client2(host, port, username, password, keyfilepath, keyfiletype): """ create_sftp_client(host, port, username, password, keyfilepath, keyfiletype) -> SFTPClient Creates a SFTP client connected to the supplied host on the supplied port authenticating as the user with supplied user...
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def get_vectorize_layer(max_features=10000, sequence_length=250) \ -> tf.keras.layers.experimental.preprocessing.TextVectorization: """Transforms a batch of strings into either a list of token indices or a dense representation. Parameters ---------- max_features : int The maximum size o...
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def test_login_success(self): """ In this case both are false, meaning the if statements doesn't get executed """ return login_user(test_user.email, test_user.password) == test_user
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def write_function_child(string_obj, function, input_flow_list, output_flow_list, xml_attribute_list): """Construct plantuml_text recursively""" function_input_port = [] function_output_port = [] external_input_port = [] external_output_port = [] parent_function_port = [...
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def test_map_and_unmap_attribute(): """tests the mapping of an attribute. 'first_name' in 'people_tiny.csv' to 'all_names' in the minimal_schema_mapping project. Checks that the mappings don't contain that mapping to start, then maps, and asserts that it has that mapping""" client = utils.client.create(...
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def test_arduino_io_shutdown(serial_handlers, memory_db, msg_publisher, msg_subscriber, cmd_publisher, cmd_subscriber): """Confirm request to shutdown is recorded.""" board = 'telemetry' port = 'arduinosimulator://?board=' + board board = board + '_board' with open_seria...
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def fetch_latest(): """Function to import all the replication files since the last import or the last 1000. FIXME: define error in except line """ try: last_import = Import.objects.all().order_by('-end')[0].end except: last_import = None sequence = get_last_replication_id() ...
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def Train(corpus): """ Parameters: corpus: String """ # List<TaggedWord> startMarkers = [] startMarkers.append(TaggedWord("<STARTTAG>", "<STARTTAG>")) startMarkers.append(TaggedWord("<STARTTAG>", "<STARTTAG>")) # List<TaggedWord> endMarkers = [] endMarkers.append(TaggedWo...
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async def tally(): """ Get the results of all election tallies. Returns: Tally results for each contest in the election """ tally = election.get_election_tally() results = { "contests": [ { "contest": contest, "selections": [ ...
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def expand_parameters_from_remanence_array(magnet_parameters, params, prefix): """ Return a new parameters dict with the magnet parameters in the form '<prefix>_<magnet>_<segment>', with the values from 'magnet_parameters' and other parameters from 'params'. The length of the array 'magnet_paramete...
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def addToOrStartNewRange(oldRange, tissueRangeScores, newPosition, vals, tissues, tissueFhs): """For all the tissues in vals, figure out if we are still in the same exon and adding to the previous range/score combo, or if we are in the same exon but with a different score, or a new exon alto...
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def transformNode(doc, newTag, node=None, **attrDict): """Transform a DOM node into new node and copy selected attributes. Creates a new DOM node with tag name 'newTag' for document 'doc' and copies selected attributes from an existing 'node' as provided in 'attrDict'. The source 'node' can be None. At...
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def jsonify(status=200, indent=2, sort_keys=True, **kwargs): """ Creates a jsonified response. Necessary because the default flask.jsonify doesn't correctly handle sets, dates, or iterators Args: status (int): The status code (default: 200). indent (int): Number of spaces to indent (default...
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def _delete_task(project, collection, task): """Deletes a document from the firestore collection. Args: project: String representing the GCP project to use collection: A string representing the firestore collection task: The firestore document to be deleted """ db = firestore.Client(project) _dec...
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def detect_symbols( sources_dir: Path, host: str = "http://127.0.0.1", port: int = 8001, try_expand_macros: Optional[bool] = None, require_blank_border: Optional[bool] = None, insert_function_elements: Optional[bool] = None, merge_adjacent_elements: Optional[bool] = None, ) -> List[Symbol]: ...
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def browse(dataset_id=None, endpoint_id=None, endpoint_path=None): """ - Get list of files for the selected dataset or endpoint ID/path - Return a list of files to a browse view The target template (browse.jinja2) expects an `endpoint_uri` (if available for the endpoint), `target` (either `"dataset...
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def tag_group(tag_group, tag): """Select a tag group and a tag.""" payload = {"group": tag_group, "tag": tag} return payload
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def rollup(step: Step, store: TableStore): """Rollup a table to produce an aggregation summary. :param step: Parameters to execute the operation. See :py:class:`~data_wrangling_components.engine.verbs.rollup.RollupArgs`. :type step: Step :param store: Table store that co...
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def prefix_provider(string: str) -> str: """Prefix string with `_{provider}_`""" from optimade.server.config import CONFIG if string in CONFIG.provider_fields.get("structures", []): return f"_{CONFIG.provider.prefix}_{string}" return string
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def combine_sequences(vsequences, jsequences): """ Do a pairwise combination of the v and j sequences to get putative germline sequences for the species. """ combined_sequences = {} for v in vsequences: vspecies, vallele = v for j in jsequences: _, jallele= j ...
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def read_seq_file(filename): """Reads data from sequence alignment test file. Args: filename (str): The file containing the edge list. Returns: str: The first sequence of characters. str: The second sequence of characters. int: The cost per gap in a sequence. ...
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def test_restarting(): """ Test stopping and starting the ioloop. """ res = [] def add_res(i): res.append(i) def try_start(): try: app.start() except RuntimeError: res.append('RTE') # Create new ioloop always loop = asyncio.new_event_loop() ...
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def OrthogonalInit(rng, sizeX, sizeY, sparsity=-1, scale=1): """ Orthogonal Initialization """ sizeX = int(sizeX) sizeY = int(sizeY) assert sizeX == sizeY, 'for orthogonal init, sizeX == sizeY' if sparsity < 0: sparsity = sizeY else: sparsity = numpy.minimum(sizeY, spa...
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def build_complement(dna): """ :param dna: str, the DNA strand that user gives(all letters are upper case) :return: str, the complement of dna """ new_dna = '' for base in dna: if base == 'A': new_dna += 'T' elif base == 'T': new_dna += 'A' elif ba...
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def com_google_fonts_check_162(ttFont, style): """ Check name table: TYPOGRAPHIC_SUBFAMILY_NAME entries. """ from unidecode import unidecode from fontbakery.utils import name_entry_id from fontbakery.constants import NAMEID_TYPOGRAPHIC_SUBFAMILY_NAME failed = False style_with_spaces = style.replace('Italic...
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def _seasonal_prediction_with_confidence(arima_res, start, end, exog, alpha, **kwargs): """Compute the prediction for a SARIMAX and get a conf interval Unfortunately, SARIMAX does not really provide a nice way to get the confidence intervals out of the box, so we ha...
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def attack(X_train, y_train, X_test, y_test, unmon_label, args, VERBOSE=1): """ Perform WF training and testing """ classes = len(set(list(y_train))) print(classes) # shuffle and split for val s = np.arange(X_test.shape[0]) np.random.shuffle(s) sp = X_test.shape[0]//2 X_va = X_t...
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def create_lexicon(pos, neg): """Create Lexicon.""" lexicon = [] for fi in [pos, neg]: with open(fi, 'r') as f: contents = f.readlines() for l in contents[:hm_lines]: all_words = word_tokenize(l.lower()) lexicon += list(all_words) lexicon =...
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def trailing_zeros(x): """ Number of trailing zeros in a number.""" if x % 1 != 0 | x == 0: return 0 magn = floor(log10(x)) trailing = 0 for i in range(1, magn + 1): if x % (10 ** i) == 0: trailing = i else: break return trailing
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def crawler(root_url, out_file, out_format='xml', maxtasks=100, batch_size=10000, prefix=None, load=False): """ run crowler :param root_url: Site root url :param out_file: path to the out file :param out_format: format of out file [xml, txt] :param maxtasks: max count of tasks :r...
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def _check_dependency(dependency: xml.etree.ElementTree.Element, include: List[str], exclude: Optional[List[str]] = None) -> bool: """Check a dependency for a component. Verifies that the given {dependency} is satisfied by components listed in `include` or `exclu...
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def top_height(sz): """Returns the height of the top part of size `sz' AS-Waksman network.""" return sz // 2
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def insert_sequence_read_set(db: DatabaseSession, sample_id: int, urls: list): """ Insert sequencing read set directly into warehouse.sequence_read_set, with the *sample_id* and *urls*. """ LOG.debug(f"Inserting sequence read set for sample {sample_id}") data = { "sample_id": sample_id,...
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def constructAuxGraph(path): """ This function constructs the auxiliary graph given a python dictionary as argument wich consists of the # of the path as the key of the dictionary and the path (source, intermediate nodes, destination) that a predifined route has to traverse in order to go from the sou...
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def eval_time(function: Callable): """decorator to log the duration of the decorated method""" def timed(*args, **kwargs): log = logging.getLogger(__name__) time_start = time.time() result = function(*args, **kwargs) time_elapsed = round(time.time() - time_start, 2) log...
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def parse_data( data: Union[AnnData, DataFrame, np.ndarray], gene_names: Optional[Iterable[str]] = None, sample_names: Optional[Iterable[str]] = None ) -> Tuple[np.ndarray, list, list]: """Reduces :class:`~anndata.AnnData` and :class:`~pandas.DataFrame` to a :class:`~numpy.dnarray` and extracts `gen...
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def german_actionset_unaligned(german_X): """Generate an actionset for German data.""" # setup actionset action_set = ActionSet(X = german_X) immutable_attributes = ['Age', 'Single', 'JobClassIsSkilled', 'ForeignWorker', 'OwnsHouse', 'RentsHouse'] action_set[immutable_attributes].mutable = Fals...
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def recursively_contains(val1, val2, parent_key=None): """ Returns True if val1 is a subset of val2 both in its items as well as the items's items if it's a list or a dictionary. Returns False if there are items within val1 but not in val2. """ # If not same data type, fail if type(val1) != ...
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def generate_email(sender, recipient, subject, body, attachment_path): """Creates an email with an attachement.""" # Basic Email formatting message = email.message.EmailMessage() message["From"] = sender message["To"] = recipient message["Subject"] = subject message.set_content(body) # Process the attachment a...
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def scroll_to_line(view, line, animate): """Scroll y-axis so that `line` appears at the top of the viewport.""" x, y = view.text_to_layout(view.text_point(line, 0)) view.run_command('_sublime_linter_scroll_y', {'y': y, 'animate': animate})
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def test_mode(user, godmode=False, questions_list=None, quiz_id=None): """creates a trial question paper for the moderators""" if questions_list is not None: trial_course = Course.objects.create_trial_course(user) trial_quiz = Quiz.objects.create_trial_quiz(trial_course, user) trial_que...
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def add_auth_token(auth_token: str, desc: Optional[str], call_count_limit: Optional[int] = None, call_count_limit_relative: bool = False) -> bool: """ Add or update an auth token to the DB. Local cache will be updated during next API request in is_auth_token_valid(...)! ...
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def id_for_new_id_style(old_id, is_metabolite=False): """ Get the new style id""" new_id = old_id def _join_parts(the_id, the_compartment): if the_compartment: the_id = the_id + '_' + the_compartment return the_id def _remove_d_underscore(s): """Removed repeated, le...
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def analysis_instance_start_success(instance_uuid, instance_name, records, action=False, guest_hb=False): """ Analyze records and determine if instance is started """ always = True possible_records \ = [(action, NFV_VIM.INSTANCE_NFVI_ACTION_START), ...
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def tensorboards(ctx, query, sort, page): """List tensorboard jobs for this project. Uses [Caching](/references/polyaxon-cli/#caching) """ user, project_name = get_project_or_local(ctx.obj.get('project')) page = page or 1 try: response = PolyaxonClient().project.list_tensorboards(usern...
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def evaluate_on_semeval_2012_2(w): """ Simple method to score embedding using SimpleAnalogySolver Parameters ---------- w : Embedding or dict Embedding or dict instance. Returns ------- result: pandas.DataFrame Results with spearman correlation per broad category with speci...
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def setup(hass, config): """Set up MagicHome Component.""" from magichome import MagicHomeApi magichome = MagicHomeApi() username = config[DOMAIN][CONF_USERNAME] password = config[DOMAIN][CONF_PASSWORD] company = config[DOMAIN][CONF_COMPANY] platform = config[DOMAIN][CONF_PLATFORM] has...
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def download_all_files_from_directory_rec(source_dir, target_dir): """Downloads all files in the Google Drive directory at [source_dir] (recursively) into the [target_dir] on the local machine.""" drive = Drive("https://www.googleapis.com/auth/drive.readonly") files = drive.ls(source_dir) for f...
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def valid_lsi(addr): """Is the string a valid Local Scope Identifier? >>> valid_lsi('1.0.0.1') True >>> valid_lsi('127.0.0.1') False >>> valid_lsi('1.0.1') False >>> valid_lsi('1.0.0.365') False >>> valid_lsi('1.foobar') False """ parts = addr.split('.') if not ...
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def test_cray_hsm_state_components_delete(cli_runner, rest_mock): """ Test `cray hsm state components delete` with valid params """ runner, cli, config = cli_runner url_template = '/apis/smd/hsm/v1/State/Components' comp = 'x0c0s1b0n0' result = runner.invoke(cli, ['hsm', 'state', 'components', 'del...
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def imshow_coocc(coocc, percent=True, ax=None): """visualize profile class co-occurrence matrix""" ax = ax or plt.gca() size = coocc.shape[0] annot = (coocc*100).round().astype(int).values if percent else coocc.values ax.imshow(coocc.T) for x in range(size): for y in range(size): ...
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def check_options(input_dir1, input_dir2, output_dir, chunk_size, usage): """ Make sure the supplied options are meaningful. Separate from the process_options function to curb function length. """ # Check all arguments before printing usage message is_invalid = False # Check that ...
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def sub_m(D, C_lasso, C_group, C_ridge, eta=1e0): """Solve the Sub_m subproblem.""" return shrink(D, C_lasso * eta, C_group * eta, C_ridge * eta)
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def move(arg: str, dest: str): """Move files in glob `arg` to `dest` with `shutil.move`""" for f in glob.glob(arg): removeIfExists(join(dest, os.path.basename(f))) shutil.move(f, dest)
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def grade(morse_code, inputs): """Grades how well the `inputs` represents the expected `morse_code`. Returns a tuple with three elements. The first is a Boolean telling if we consider the input good enough (this is the pass/fail evaluation). The next two elements are strings to be show, respectively, in...
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def test_md032_bad_list_within_block_quote_surrounded(): """ Test to make sure we get the expected behavior after scanning a good file from the test/resources/rules/MD026 directory that has atx headings that do not end with punctuation. """ # Arrange scanner = MarkdownScanner() supplied...
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def main(): """ Main steering function. """ dist_pc, OoM = parse_distance() dist_cm = pc_to_cm(dist_pc, OoM) print("{} pc = {} cm".format(dist_pc * OoM, dist_cm)) return
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def test_macsec_psk_br3(dev, apdev): """MACsec PSK (bridge; 3 devices)""" try: run_macsec_psk_br(dev, apdev, 3, [10, 20, 30]) finally: cleanup_macsec_br(count=3)
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def create_test_endpoint(client, ec2_client, name=None, tags=None): """Create an endpoint that can be used for testing purposes. Can't be used for unit tests that need to know/test the arguments. """ if not tags: tags = [] random_num = get_random_hex(10) subnet_ids = create_subnets(ec2_...
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def plot_clusters(estimator, X, chart=None, fig=None, axes=None, n_rows=None, n_cols=None, sample_labels=None, cluster_colors=None, cluster_labels=None, center_colors=None, center_labels=None, center_width=3, col...
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def head(url): """ Make a HEAD request to the URL. If we do not get a 404 then the URL is valid. If there are any exceptions then return False. """ try: resp = s.head(url, timeout=5, verify=False) except requests.exceptions.RequestException: return False if resp.status_...
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def cmd_SetNodeToAbsolutePathRecursive(event): """Change "/dirname/" to "@path /absolute/path/to/dirname", recursively""" c = event.get('c') for s in run_recursive(c): cmd_SetNodeToAbsolutePath(event, p=s)
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def long_description(): """Reads the README file""" with open(pathlib.Path(WORKING_DIRECTORY, "README.rst")) as stream: return stream.read()
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def load_embeddings(embeddings_path, aws=False): """Loads pre-trained word embeddings from tsv file. Args: embeddings_path - path to the embeddings file. Returns: embeddings - dict mapping words to vectors; dim - dimension of the vectors. """ if aws: embeddings = {} reader = csv.reader(i...
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def dibujar_persona(display, posicion, color): """Dibuja la persona en la posición especificada y color definido. Parámetros ---------- display : Pantalla de Pygame Pantalla donde se dibujará la persona posicion : tuple Posición donde se dibujará la persona color : Color de Pyga...
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async def create_check_request( installation_url: str, repo_name: str, token: str, check_name: str, head_sha: str ) -> Dict[str, Any]: """ Initiate Check after Pull Request was created. It contains terminal hash from PR, name, unique github id. """ org_name = installation_url.rstrip("/").split("...
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def get_public_key() -> bytes: """ Retrieve the raw public key. :return: Bytes of key """ key = Ed25519PrivateKey.from_private_bytes(config.WEBHOOK_KEY) return key.public_key().public_bytes(Encoding.Raw, PublicFormat.Raw)
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def send_cat_picture(update: Update, context: CallbackContext): """ Обработчик команды /cat и кнопки "Прислать котика" Args: update: Контекст бота context: Внешний контекст Returns: None """ cat_list = glob("images/*.jp*g") cat_pic = choice(cat_list) context.bot...
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def kill_child_processes_by_pids(pids_to_kill: List[int], timeout: int = 5) -> None: """ Kills child processes for the current process. First, it sends the SIGTERM signal, and after the time specified by the `timeout` parameter, sends the SIGKILL signal, if the process is still alive. :param pids_...
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def create_empty_array(n_k, n_vals_i, n_feats): """Create null measure in the array form. Parameters ---------- n_k: int the number of perturbations n_vals_i: int the number of indices of the output measure. n_feats: int the number of features. Returns ------- ...
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def transform_bbox(x): """ Function purpose: Transform bounding box (str) into geometry x: bounding box (str) """ try: ring = ogr.Geometry(ogr.wkbLinearRing) ring.AddPoint(x[0], x[1]) ring.AddPoint(x[2], x[1]) ring.AddPoint(x[2], x[3]) ring.AddPoint(x[0], x[3...
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def addUser(username: str, autoGenerateKeys: bool = True, keys: list = []): """ Create an user with the corresponding username to the users list and return the corresponding user id which can be used as index username: name of the user autoGenerateKeys: generate elGammal keys for the user keys: bas...
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def setup_logging(debug=False): """ Set up the logging for hypernode_vagrant_runner :param bool debug: Log DEBUG level to console (INFO is default) :return obj logger: The logger object """ logger = getLogger('hypernode_vagrant_runner') logger.setLevel(DEBUG if debug else INFO) console_h...
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def _analytical_expectation_worker_func(indices, programs, params, ops): """Compute the expectation of the op[batch_index], w.r.t circuit[batch_index] where batch_index is calculated from indices.""" x_np = _convert_simple_view_to_np(INFO_DICT['arr'], np.float32, INFO_D...
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def test_issue_312_regression(): """ Make sure there is no trailing comma when writing a CRTF string with no metadata. """ reg = EllipseSkyRegion(center=SkyCoord(279.174990 * u.deg, -21.257123 * u.deg, frame='fk5'), width=0.001571...
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def remove_conf(module): """ Remove specified module from db Module is identified by its name in lowercase """ # Get the original document res = db.delete("configuration", 'name', str(module).lower()) if res == None: raise ConfError("Module '%s' wasn't deleted" % module, status_c...
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def video(package): """method for download video """ params = package.get('params') video_id = params.get(ParamType.VideoID) request = package.get('request') range_header = request.META.get('HTTP_RANGE', '').strip() range_re = re.compile(r'bytes\s*=\s*(\d+)\s*-\s*(\d*)', re.I) range_mat...
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def test_dft(test, expectedShape, raises): """Test normalisation works for arrays of one and positive integers.""" import fourier_functions if raises: with pytest.raises(raises): npt.assert_equal(fourier_functions.fourier_to_coefficients(test)[1].shape, expectedShape) else: n...
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def task_items(max_entries=None): """Information about the items in the task queue. Returns a generator of QueueItems. Keyword arguments: max_entries - (int) (Default: None) Maximum number of items to return. Default is to return all entries. """ con = sqlite3.connect(str(DB_PATH)) ...
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def _remove_anchors_in_pattern(pattern: str) -> Tuple[Optional[str], Optional[str]]: """ We need to remove the anchors (``^``, ``$``) since schemas are always anchored. This is necessary since otherwise the schema validation fails. See: https://stackoverflow.com/questions/4367914/regular-expression-in-...
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def bfs(connections, start, goal=None): """ Requires a connections dict with tuples with neighbors per node. Or a connections function returning neighbors per node Returns if goal == None: return dict of locations with neighbor closest to start elif goal found: returns path to goal el...
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def test_part2_exercise_solution(exercise_solution): """Test part 2 on exercise_solution input""" assert exercise_solution.part2() == 5208377027195
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def uninstall(plugin_name): """Uninstalls a plugin (no migrations).""" validate_plugin(plugin_name) plugin = PluginRegistry.query.filter_by(name=plugin_name).first_or_404() if plugin.is_installed: PluginStore.query.filter_by(plugin_id=plugin.id).delete() db.session.commit() clic...
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def reverse_complement(dna): """ Reverse-complement a DNA sequence :param dna: string, DNA sequence :type dna: str :return: reverse-complement of a DNA sequence """ complement = {'A': 'T', 'C': 'G', 'G': 'C', 'T': 'A'} return ''.join([complement[base] for base in dna[::-1]])
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