Add files using upload-large-folder tool
Browse filesThis view is limited to 50 files because it contains too many changes.
See raw diff
- .gitattributes +25 -0
- annotations_filtered.zarr/X/.zarray +23 -0
- annotations_filtered.zarr/X/.zattrs +4 -0
- annotations_filtered.zarr/layers/.zattrs +4 -0
- annotations_filtered.zarr/layers/.zgroup +3 -0
- annotations_filtered.zarr/obs/.zattrs +16 -0
- annotations_filtered.zarr/obs/.zgroup +3 -0
- annotations_filtered.zarr/obs/_index/.zarray +25 -0
- annotations_filtered.zarr/obs/_index/.zattrs +4 -0
- annotations_filtered.zarr/obs/_index/0 +0 -0
- annotations_filtered.zarr/obs/fov_name/codes/.zattrs +4 -0
- annotations_filtered.zarr/obs/infection_status/categories/.zarray +25 -0
- annotations_filtered.zarr/obs/infection_status/categories/.zattrs +4 -0
- annotations_filtered.zarr/obs/infection_status/categories/0 +0 -0
- annotations_filtered.zarr/obs/infection_status/codes/.zarray +21 -0
- annotations_filtered.zarr/obs/infection_status/codes/.zattrs +4 -0
- annotations_filtered.zarr/obs/track_id/0 +0 -0
- annotations_filtered.zarr/obs/y/.zattrs +4 -0
- annotations_filtered.zarr/obs/y/0 +0 -0
- annotations_filtered.zarr/obsm/.zattrs +4 -0
- annotations_filtered.zarr/obsm/.zgroup +3 -0
- annotations_filtered.zarr/obsm/X_pca/.zarray +23 -0
- annotations_filtered.zarr/obsm/X_pca/.zattrs +4 -0
- annotations_filtered.zarr/obsm/X_pca/1.0 +3 -0
- annotations_filtered.zarr/obsm/X_projections/.zarray +23 -0
- annotations_filtered.zarr/obsm/X_projections/.zattrs +4 -0
- annotations_filtered.zarr/obsm/X_projections/1.0 +3 -0
- annotations_filtered.zarr/obsm/X_projections/1.1 +3 -0
- annotations_filtered.zarr/obsp/.zattrs +4 -0
- annotations_filtered.zarr/obsp/.zgroup +3 -0
- annotations_filtered.zarr/raw/.zarray +17 -0
- annotations_filtered.zarr/raw/.zattrs +4 -0
- annotations_filtered.zarr/uns/.zattrs +4 -0
- annotations_filtered.zarr/uns/.zgroup +3 -0
- annotations_filtered.zarr/var/.zattrs +6 -0
- annotations_filtered.zarr/var/.zgroup +3 -0
- annotations_filtered.zarr/var/_index/.zarray +25 -0
- annotations_filtered.zarr/var/_index/.zattrs +4 -0
- annotations_filtered.zarr/var/_index/0 +0 -0
- annotations_filtered.zarr/varm/.zattrs +4 -0
- annotations_filtered.zarr/varm/.zgroup +3 -0
- annotations_filtered.zarr/varp/.zattrs +4 -0
- annotations_filtered.zarr/varp/.zgroup +3 -0
- dataset.zarr/A/1/000000/0/c/0/0/0/0/0 +3 -0
- dataset.zarr/A/1/000000/0/c/0/1/0/0/0 +3 -0
- dataset.zarr/A/1/000000/0/c/0/2/0/0/0 +3 -0
- dataset.zarr/A/1/000000/0/zarr.json +84 -0
- dataset.zarr/A/1/000001/0/c/0/0/0/0/0 +3 -0
- dataset.zarr/A/1/000001/0/c/0/1/0/0/0 +3 -0
- dataset.zarr/A/1/000001/0/c/0/2/0/0/0 +3 -0
.gitattributes
CHANGED
|
@@ -57,3 +57,28 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
|
|
| 57 |
# Video files - compressed
|
| 58 |
*.mp4 filter=lfs diff=lfs merge=lfs -text
|
| 59 |
*.webm filter=lfs diff=lfs merge=lfs -text
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 57 |
# Video files - compressed
|
| 58 |
*.mp4 filter=lfs diff=lfs merge=lfs -text
|
| 59 |
*.webm filter=lfs diff=lfs merge=lfs -text
|
| 60 |
+
annotations_filtered.zarr/obsm/X_projections/1.0 filter=lfs diff=lfs merge=lfs -text
|
| 61 |
+
annotations_filtered.zarr/obsm/X_projections/1.1 filter=lfs diff=lfs merge=lfs -text
|
| 62 |
+
annotations_filtered.zarr/obsm/X_pca/1.0 filter=lfs diff=lfs merge=lfs -text
|
| 63 |
+
dataset.zarr/A/1/000001/0/c/0/2/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 64 |
+
dataset.zarr/A/1/000000/0/c/0/1/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 65 |
+
dataset.zarr/A/1/000001/0/c/0/1/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 66 |
+
dataset.zarr/A/1/000000/0/c/0/2/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 67 |
+
dataset.zarr/A/1/000001/0/c/0/0/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 68 |
+
dataset.zarr/A/1/000000/0/c/0/0/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 69 |
+
dataset.zarr/A/2/002000/0/c/0/2/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 70 |
+
dataset.zarr/A/2/002001/0/c/0/2/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 71 |
+
dataset.zarr/A/2/001001/0/c/0/2/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 72 |
+
dataset.zarr/A/2/002001/0/c/0/1/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 73 |
+
dataset.zarr/A/2/001000/0/c/0/2/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 74 |
+
dataset.zarr/A/2/001001/0/c/0/1/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 75 |
+
dataset.zarr/A/2/001000/0/c/0/1/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 76 |
+
dataset.zarr/A/2/002000/0/c/0/1/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 77 |
+
dataset.zarr/A/2/000001/0/c/0/2/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 78 |
+
dataset.zarr/A/2/002001/0/c/0/0/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 79 |
+
dataset.zarr/A/2/000001/0/c/0/1/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 80 |
+
dataset.zarr/A/2/001001/0/c/0/0/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 81 |
+
dataset.zarr/A/2/001000/0/c/0/0/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 82 |
+
dataset.zarr/A/2/002000/0/c/0/0/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 83 |
+
dataset.zarr/A/2/000001/0/c/0/0/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 84 |
+
dataset.zarr/A/2/000000/0/c/0/2/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
annotations_filtered.zarr/X/.zarray
ADDED
|
@@ -0,0 +1,23 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"shape": [
|
| 3 |
+
8276,
|
| 4 |
+
768
|
| 5 |
+
],
|
| 6 |
+
"chunks": [
|
| 7 |
+
1035,
|
| 8 |
+
192
|
| 9 |
+
],
|
| 10 |
+
"dtype": "<f4",
|
| 11 |
+
"fill_value": 0.0,
|
| 12 |
+
"order": "C",
|
| 13 |
+
"filters": null,
|
| 14 |
+
"dimension_separator": ".",
|
| 15 |
+
"compressor": {
|
| 16 |
+
"id": "blosc",
|
| 17 |
+
"cname": "lz4",
|
| 18 |
+
"clevel": 5,
|
| 19 |
+
"shuffle": 1,
|
| 20 |
+
"blocksize": 0
|
| 21 |
+
},
|
| 22 |
+
"zarr_format": 2
|
| 23 |
+
}
|
annotations_filtered.zarr/X/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "array",
|
| 3 |
+
"encoding-version": "0.2.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/layers/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "dict",
|
| 3 |
+
"encoding-version": "0.1.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/layers/.zgroup
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"zarr_format": 2
|
| 3 |
+
}
|
annotations_filtered.zarr/obs/.zattrs
ADDED
|
@@ -0,0 +1,16 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"column-order": [
|
| 3 |
+
"id",
|
| 4 |
+
"fov_name",
|
| 5 |
+
"track_id",
|
| 6 |
+
"parent_track_id",
|
| 7 |
+
"parent_id",
|
| 8 |
+
"t",
|
| 9 |
+
"y",
|
| 10 |
+
"x",
|
| 11 |
+
"infection_status"
|
| 12 |
+
],
|
| 13 |
+
"_index": "_index",
|
| 14 |
+
"encoding-type": "dataframe",
|
| 15 |
+
"encoding-version": "0.2.0"
|
| 16 |
+
}
|
annotations_filtered.zarr/obs/.zgroup
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"zarr_format": 2
|
| 3 |
+
}
|
annotations_filtered.zarr/obs/_index/.zarray
ADDED
|
@@ -0,0 +1,25 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"shape": [
|
| 3 |
+
8276
|
| 4 |
+
],
|
| 5 |
+
"chunks": [
|
| 6 |
+
8276
|
| 7 |
+
],
|
| 8 |
+
"dtype": "|O",
|
| 9 |
+
"fill_value": "",
|
| 10 |
+
"order": "C",
|
| 11 |
+
"filters": [
|
| 12 |
+
{
|
| 13 |
+
"id": "vlen-utf8"
|
| 14 |
+
}
|
| 15 |
+
],
|
| 16 |
+
"dimension_separator": ".",
|
| 17 |
+
"compressor": {
|
| 18 |
+
"id": "blosc",
|
| 19 |
+
"cname": "lz4",
|
| 20 |
+
"clevel": 5,
|
| 21 |
+
"shuffle": 1,
|
| 22 |
+
"blocksize": 0
|
| 23 |
+
},
|
| 24 |
+
"zarr_format": 2
|
| 25 |
+
}
|
annotations_filtered.zarr/obs/_index/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "string-array",
|
| 3 |
+
"encoding-version": "0.2.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/obs/_index/0
ADDED
|
Binary file (34.2 kB). View file
|
|
|
annotations_filtered.zarr/obs/fov_name/codes/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "array",
|
| 3 |
+
"encoding-version": "0.2.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/obs/infection_status/categories/.zarray
ADDED
|
@@ -0,0 +1,25 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"shape": [
|
| 3 |
+
3
|
| 4 |
+
],
|
| 5 |
+
"chunks": [
|
| 6 |
+
3
|
| 7 |
+
],
|
| 8 |
+
"dtype": "|O",
|
| 9 |
+
"fill_value": "",
|
| 10 |
+
"order": "C",
|
| 11 |
+
"filters": [
|
| 12 |
+
{
|
| 13 |
+
"id": "vlen-utf8"
|
| 14 |
+
}
|
| 15 |
+
],
|
| 16 |
+
"dimension_separator": ".",
|
| 17 |
+
"compressor": {
|
| 18 |
+
"id": "blosc",
|
| 19 |
+
"cname": "lz4",
|
| 20 |
+
"clevel": 5,
|
| 21 |
+
"shuffle": 1,
|
| 22 |
+
"blocksize": 0
|
| 23 |
+
},
|
| 24 |
+
"zarr_format": 2
|
| 25 |
+
}
|
annotations_filtered.zarr/obs/infection_status/categories/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "string-array",
|
| 3 |
+
"encoding-version": "0.2.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/obs/infection_status/categories/0
ADDED
|
Binary file (57 Bytes). View file
|
|
|
annotations_filtered.zarr/obs/infection_status/codes/.zarray
ADDED
|
@@ -0,0 +1,21 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"shape": [
|
| 3 |
+
8276
|
| 4 |
+
],
|
| 5 |
+
"chunks": [
|
| 6 |
+
8276
|
| 7 |
+
],
|
| 8 |
+
"dtype": "|i1",
|
| 9 |
+
"fill_value": 0,
|
| 10 |
+
"order": "C",
|
| 11 |
+
"filters": null,
|
| 12 |
+
"dimension_separator": ".",
|
| 13 |
+
"compressor": {
|
| 14 |
+
"id": "blosc",
|
| 15 |
+
"cname": "lz4",
|
| 16 |
+
"clevel": 5,
|
| 17 |
+
"shuffle": 1,
|
| 18 |
+
"blocksize": 0
|
| 19 |
+
},
|
| 20 |
+
"zarr_format": 2
|
| 21 |
+
}
|
annotations_filtered.zarr/obs/infection_status/codes/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "array",
|
| 3 |
+
"encoding-version": "0.2.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/obs/track_id/0
ADDED
|
Binary file (3.16 kB). View file
|
|
|
annotations_filtered.zarr/obs/y/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "array",
|
| 3 |
+
"encoding-version": "0.2.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/obs/y/0
ADDED
|
Binary file (10.2 kB). View file
|
|
|
annotations_filtered.zarr/obsm/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "dict",
|
| 3 |
+
"encoding-version": "0.1.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/obsm/.zgroup
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"zarr_format": 2
|
| 3 |
+
}
|
annotations_filtered.zarr/obsm/X_pca/.zarray
ADDED
|
@@ -0,0 +1,23 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"shape": [
|
| 3 |
+
8276,
|
| 4 |
+
8
|
| 5 |
+
],
|
| 6 |
+
"chunks": [
|
| 7 |
+
4138,
|
| 8 |
+
8
|
| 9 |
+
],
|
| 10 |
+
"dtype": "<f4",
|
| 11 |
+
"fill_value": 0.0,
|
| 12 |
+
"order": "C",
|
| 13 |
+
"filters": null,
|
| 14 |
+
"dimension_separator": ".",
|
| 15 |
+
"compressor": {
|
| 16 |
+
"id": "blosc",
|
| 17 |
+
"cname": "lz4",
|
| 18 |
+
"clevel": 5,
|
| 19 |
+
"shuffle": 1,
|
| 20 |
+
"blocksize": 0
|
| 21 |
+
},
|
| 22 |
+
"zarr_format": 2
|
| 23 |
+
}
|
annotations_filtered.zarr/obsm/X_pca/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "array",
|
| 3 |
+
"encoding-version": "0.2.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/obsm/X_pca/1.0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:bb4d0937ab78c83c394e2eba7a88b96d567cec6188a21f760bc2693bf8521a45
|
| 3 |
+
size 123325
|
annotations_filtered.zarr/obsm/X_projections/.zarray
ADDED
|
@@ -0,0 +1,23 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"shape": [
|
| 3 |
+
8276,
|
| 4 |
+
32
|
| 5 |
+
],
|
| 6 |
+
"chunks": [
|
| 7 |
+
4138,
|
| 8 |
+
16
|
| 9 |
+
],
|
| 10 |
+
"dtype": "<f4",
|
| 11 |
+
"fill_value": 0.0,
|
| 12 |
+
"order": "C",
|
| 13 |
+
"filters": null,
|
| 14 |
+
"dimension_separator": ".",
|
| 15 |
+
"compressor": {
|
| 16 |
+
"id": "blosc",
|
| 17 |
+
"cname": "lz4",
|
| 18 |
+
"clevel": 5,
|
| 19 |
+
"shuffle": 1,
|
| 20 |
+
"blocksize": 0
|
| 21 |
+
},
|
| 22 |
+
"zarr_format": 2
|
| 23 |
+
}
|
annotations_filtered.zarr/obsm/X_projections/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "array",
|
| 3 |
+
"encoding-version": "0.2.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/obsm/X_projections/1.0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:727de988308548d02648c26efdea96195db8d770b83548f1d7279b92f0b2fd39
|
| 3 |
+
size 235370
|
annotations_filtered.zarr/obsm/X_projections/1.1
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:60acba5bf149100d5b4fecdec2556835fd17c3f5e4efd17e518fa393b7cdeabf
|
| 3 |
+
size 238257
|
annotations_filtered.zarr/obsp/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "dict",
|
| 3 |
+
"encoding-version": "0.1.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/obsp/.zgroup
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"zarr_format": 2
|
| 3 |
+
}
|
annotations_filtered.zarr/raw/.zarray
ADDED
|
@@ -0,0 +1,17 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"shape": [],
|
| 3 |
+
"chunks": [],
|
| 4 |
+
"dtype": "|b1",
|
| 5 |
+
"fill_value": false,
|
| 6 |
+
"order": "C",
|
| 7 |
+
"filters": null,
|
| 8 |
+
"dimension_separator": ".",
|
| 9 |
+
"compressor": {
|
| 10 |
+
"id": "blosc",
|
| 11 |
+
"cname": "lz4",
|
| 12 |
+
"clevel": 5,
|
| 13 |
+
"shuffle": 1,
|
| 14 |
+
"blocksize": 0
|
| 15 |
+
},
|
| 16 |
+
"zarr_format": 2
|
| 17 |
+
}
|
annotations_filtered.zarr/raw/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "null",
|
| 3 |
+
"encoding-version": "0.1.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/uns/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "dict",
|
| 3 |
+
"encoding-version": "0.1.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/uns/.zgroup
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"zarr_format": 2
|
| 3 |
+
}
|
annotations_filtered.zarr/var/.zattrs
ADDED
|
@@ -0,0 +1,6 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"column-order": [],
|
| 3 |
+
"_index": "_index",
|
| 4 |
+
"encoding-type": "dataframe",
|
| 5 |
+
"encoding-version": "0.2.0"
|
| 6 |
+
}
|
annotations_filtered.zarr/var/.zgroup
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"zarr_format": 2
|
| 3 |
+
}
|
annotations_filtered.zarr/var/_index/.zarray
ADDED
|
@@ -0,0 +1,25 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"shape": [
|
| 3 |
+
768
|
| 4 |
+
],
|
| 5 |
+
"chunks": [
|
| 6 |
+
768
|
| 7 |
+
],
|
| 8 |
+
"dtype": "|O",
|
| 9 |
+
"fill_value": "",
|
| 10 |
+
"order": "C",
|
| 11 |
+
"filters": [
|
| 12 |
+
{
|
| 13 |
+
"id": "vlen-utf8"
|
| 14 |
+
}
|
| 15 |
+
],
|
| 16 |
+
"dimension_separator": ".",
|
| 17 |
+
"compressor": {
|
| 18 |
+
"id": "blosc",
|
| 19 |
+
"cname": "lz4",
|
| 20 |
+
"clevel": 5,
|
| 21 |
+
"shuffle": 1,
|
| 22 |
+
"blocksize": 0
|
| 23 |
+
},
|
| 24 |
+
"zarr_format": 2
|
| 25 |
+
}
|
annotations_filtered.zarr/var/_index/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "string-array",
|
| 3 |
+
"encoding-version": "0.2.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/var/_index/0
ADDED
|
Binary file (3.18 kB). View file
|
|
|
annotations_filtered.zarr/varm/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "dict",
|
| 3 |
+
"encoding-version": "0.1.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/varm/.zgroup
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"zarr_format": 2
|
| 3 |
+
}
|
annotations_filtered.zarr/varp/.zattrs
ADDED
|
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"encoding-type": "dict",
|
| 3 |
+
"encoding-version": "0.1.0"
|
| 4 |
+
}
|
annotations_filtered.zarr/varp/.zgroup
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"zarr_format": 2
|
| 3 |
+
}
|
dataset.zarr/A/1/000000/0/c/0/0/0/0/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9d60687e5a7b699198867d281972898e47ca987d5ca0b25cfb4e064b764133b4
|
| 3 |
+
size 190593857
|
dataset.zarr/A/1/000000/0/c/0/1/0/0/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9e4976a7d71f3e05099ff914ae9f6dad4f004663cd8a3cc48e4417e10c627e49
|
| 3 |
+
size 156103883
|
dataset.zarr/A/1/000000/0/c/0/2/0/0/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:02217c8098a619f711ad77710cbee39f923f291f92723a7bb4b56453a4e81aab
|
| 3 |
+
size 152660756
|
dataset.zarr/A/1/000000/0/zarr.json
ADDED
|
@@ -0,0 +1,84 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"shape": [
|
| 3 |
+
66,
|
| 4 |
+
3,
|
| 5 |
+
1,
|
| 6 |
+
744,
|
| 7 |
+
1119
|
| 8 |
+
],
|
| 9 |
+
"data_type": "float32",
|
| 10 |
+
"chunk_grid": {
|
| 11 |
+
"name": "regular",
|
| 12 |
+
"configuration": {
|
| 13 |
+
"chunk_shape": [
|
| 14 |
+
66,
|
| 15 |
+
1,
|
| 16 |
+
1,
|
| 17 |
+
744,
|
| 18 |
+
1119
|
| 19 |
+
]
|
| 20 |
+
}
|
| 21 |
+
},
|
| 22 |
+
"chunk_key_encoding": {
|
| 23 |
+
"name": "default",
|
| 24 |
+
"configuration": {
|
| 25 |
+
"separator": "/"
|
| 26 |
+
}
|
| 27 |
+
},
|
| 28 |
+
"fill_value": 0.0,
|
| 29 |
+
"codecs": [
|
| 30 |
+
{
|
| 31 |
+
"name": "sharding_indexed",
|
| 32 |
+
"configuration": {
|
| 33 |
+
"chunk_shape": [
|
| 34 |
+
1,
|
| 35 |
+
1,
|
| 36 |
+
1,
|
| 37 |
+
186,
|
| 38 |
+
373
|
| 39 |
+
],
|
| 40 |
+
"codecs": [
|
| 41 |
+
{
|
| 42 |
+
"name": "bytes",
|
| 43 |
+
"configuration": {
|
| 44 |
+
"endian": "little"
|
| 45 |
+
}
|
| 46 |
+
},
|
| 47 |
+
{
|
| 48 |
+
"name": "blosc",
|
| 49 |
+
"configuration": {
|
| 50 |
+
"typesize": 4,
|
| 51 |
+
"cname": "zstd",
|
| 52 |
+
"clevel": 1,
|
| 53 |
+
"shuffle": "bitshuffle",
|
| 54 |
+
"blocksize": 0
|
| 55 |
+
}
|
| 56 |
+
}
|
| 57 |
+
],
|
| 58 |
+
"index_codecs": [
|
| 59 |
+
{
|
| 60 |
+
"name": "bytes",
|
| 61 |
+
"configuration": {
|
| 62 |
+
"endian": "little"
|
| 63 |
+
}
|
| 64 |
+
},
|
| 65 |
+
{
|
| 66 |
+
"name": "crc32c"
|
| 67 |
+
}
|
| 68 |
+
],
|
| 69 |
+
"index_location": "end"
|
| 70 |
+
}
|
| 71 |
+
}
|
| 72 |
+
],
|
| 73 |
+
"attributes": {},
|
| 74 |
+
"dimension_names": [
|
| 75 |
+
"T",
|
| 76 |
+
"C",
|
| 77 |
+
"Z",
|
| 78 |
+
"Y",
|
| 79 |
+
"X"
|
| 80 |
+
],
|
| 81 |
+
"zarr_format": 3,
|
| 82 |
+
"node_type": "array",
|
| 83 |
+
"storage_transformers": []
|
| 84 |
+
}
|
dataset.zarr/A/1/000001/0/c/0/0/0/0/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:6f6c0cb2adde4b02c589b6c8190beedd32c3ae6a10115574bf1d85cc52f55598
|
| 3 |
+
size 193686247
|
dataset.zarr/A/1/000001/0/c/0/1/0/0/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:8b5cb259e0110cff46e0c8b2c6885699e28416b6f65b444842c77dbceba754a8
|
| 3 |
+
size 158406522
|
dataset.zarr/A/1/000001/0/c/0/2/0/0/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:2dd465abd1258a731594a23b8149d28cd8d611e30791b2ce90075fcf175a357a
|
| 3 |
+
size 155110477
|