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"receive a message" if len(args) == 1: flags, = args pointer = ctypes.c_void_p() rtn = _nn_recv(socket, ctypes.byref(pointer), ctypes.c_size_t(-1), flags) if rtn < 0: return rtn, None else: return rtn, _create_message(pointer...
def nn_recv(socket, *args)
receive a message
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1.002379
rtn = wrapper.nn_allocmsg(size, type) if rtn is None: raise NanoMsgAPIError() return rtn
def create_message_buffer(size, type)
Create a message buffer
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14.428682
0.890505
sockets = {} # reverse map fd => socket fd_sockets = {} for s in in_sockets: sockets[s.fd] = POLLIN fd_sockets[s.fd] = s for s in out_sockets: modes = sockets.get(s.fd, 0) sockets[s.fd] = modes | POLLOUT fd_sockets[s.fd] = s # convert to milliseconds...
def poll(in_sockets, out_sockets, timeout=-1)
Poll a list of sockets :param in_sockets: sockets for reading :param out_sockets: sockets for writing :param timeout: poll timeout in seconds, -1 is infinite wait :return: tuple (read socket list, write socket list)
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if self.uses_nanoconfig: raise ValueError("Nanoconfig address must be sole endpoint") endpoint_id = _nn_check_positive_rtn( wrapper.nn_bind(self._fd, address) ) ep = Socket.BindEndpoint(self, endpoint_id, address) self._endpoints.append(ep) ...
def bind(self, address)
Add a local endpoint to the socket
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if self.uses_nanoconfig: raise ValueError("Nanoconfig address must be sole endpoint") endpoint_id = _nn_check_positive_rtn( wrapper.nn_connect(self.fd, address) ) ep = Socket.ConnectEndpoint(self, endpoint_id, address) self._endpoints.append(ep) ...
def connect(self, address)
Add a remote endpoint to the socket
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global nanoconfig_started if len(self._endpoints): raise ValueError("Nanoconfig address must be sole endpoint") endpoint_id = _nn_check_positive_rtn( wrapper.nc_configure(self.fd, address) ) if not nanoconfig_started: nanoconfig_starte...
def configure(self, address)
Configure socket's addresses with nanoconfig
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if self.is_open(): fd = self._fd self._fd = -1 if self.uses_nanoconfig: wrapper.nc_close(fd) else: _nn_check_positive_rtn(wrapper.nn_close(fd))
def close(self)
Close the socket
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if buf is None: rtn, out_buf = wrapper.nn_recv(self.fd, flags) else: rtn, out_buf = wrapper.nn_recv(self.fd, buf, flags) _nn_check_positive_rtn(rtn) return bytes(buffer(out_buf))[:rtn]
def recv(self, buf=None, flags=0)
Recieve a message.
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_nn_check_positive_rtn(wrapper.nn_send(self.fd, msg, flags))
def send(self, msg, flags=0)
Send a message
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# ax.figure.canvas.draw() # need to draw before the transforms are set. transform = sc.get_transform() transOffset = sc.get_offset_transform() offsets = sc._offsets paths = sc.get_paths() transforms = sc.get_transforms() if not transform.is_affine: paths = [transform.transform_p...
def get_bboxes_pathcollection(sc, ax)
Function to return a list of bounding boxes in data coordinates for a scatter plot Thank you to ImportanceOfBeingErnest https://stackoverflow.com/a/55007838/1304161
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cx, cy = get_midpoint(bbox) dir_x = np.sign(cx-xp) dir_y = np.sign(cy-yp) if dir_x == -1: dx = xp - bbox.xmax elif dir_x == 1: dx = xp - bbox.xmin else: dx = 0 if dir_y == -1: dy = yp - bbox.ymax elif dir_y == 1: dy = yp - bbox.ymin els...
def overlap_bbox_and_point(bbox, xp, yp)
Given a bbox that contains a given point, return the (x, y) displacement necessary to make the bbox not overlap the point.
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if ax is None: ax = plt.gca() if renderer is None: r = get_renderer(ax.get_figure()) else: r = renderer xmin, xmax = sorted(ax.get_xlim()) ymin, ymax = sorted(ax.get_ylim()) bboxes = get_bboxes(texts, r, expand, ax=ax) if 'x' not in direction: ha = [''] ...
def optimally_align_text(x, y, texts, expand=(1., 1.), add_bboxes=[], renderer=None, ax=None, direction='xy')
For all text objects find alignment that causes the least overlap with points and other texts and apply it
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if ax is None: ax = plt.gca() if renderer is None: r = get_renderer(ax.get_figure()) else: r = renderer bboxes = get_bboxes(texts, r, expand, ax=ax) xmins = [bbox.xmin for bbox in bboxes] xmaxs = [bbox.xmax for bbox in bboxes] ymaxs = [bbox.ymax for bbox in bboxe...
def repel_text(texts, renderer=None, ax=None, expand=(1.2, 1.2), only_use_max_min=False, move=False)
Repel texts from each other while expanding their bounding boxes by expand (x, y), e.g. (1.2, 1.2) would multiply width and height by 1.2. Requires a renderer to get the actual sizes of the text, and to that end either one needs to be directly provided, or the axes have to be specified, and the renderer...
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if ax is None: ax = plt.gca() if renderer is None: r = get_renderer(ax.get_figure()) else: r = renderer bboxes = get_bboxes(texts, r, expand, ax=ax) overlaps_x = np.zeros((len(bboxes), len(add_bboxes))) overlaps_y = np.zeros_like(overlaps_x) overlap_directions_...
def repel_text_from_bboxes(add_bboxes, texts, renderer=None, ax=None, expand=(1.2, 1.2), only_use_max_min=False, move=False)
Repel texts from other objects' bboxes while expanding their (texts') bounding boxes by expand (x, y), e.g. (1.2, 1.2) would multiply width and height by 1.2. Requires a renderer to get the actual sizes of the text, and to that end either one needs to be directly provided, or the axes have to be specifi...
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assert len(x) == len(y) if ax is None: ax = plt.gca() if renderer is None: r = get_renderer(ax.get_figure()) else: r = renderer bboxes = get_bboxes(texts, r, expand, ax=ax) # move_x[i,j] is the x displacement of the i'th text caused by the j'th point move_x = np...
def repel_text_from_points(x, y, texts, renderer=None, ax=None, expand=(1.2, 1.2), move=False)
Repel texts from all points specified by x and y while expanding their (texts'!) bounding boxes by expandby (x, y), e.g. (1.2, 1.2) would multiply both width and height by 1.2. Requires a renderer to get the actual sizes of the text, and to that end either one needs to be directly provided, or the axes...
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if not need_counts: return CardinalityEstimator() if size_mb is None: raise ValueError("Max size in MB must be provided.") if need_iteration: if log_counting: raise ValueError("Log counting is only supported with CMS implementation (need_iteration=False).") r...
def bounter(size_mb=None, need_iteration=True, need_counts=True, log_counting=None)
Factory method for bounter implementation. Args: size_mb (int): Desired memory footprint of the counter. need_iteration (Bool): With `True`, create a `HashTable` implementation which can iterate over inserted key/value pairs. With `False`, create a `CountMinS...
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self.authorize_url = self.authorize_url[:self.authorize_url.find('?')] \ if '?' in self.authorize_url else self.authorize_url qb_service = OAuth1Service( consumer_key=self.consumer_key, consumer_secret=self.consumer_secret, request_token_url=self...
def get_authorize_url(self, callback_url)
Returns the Authorize URL as returned by QB, and specified by OAuth 1.0a. :return URI:
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qb_service = OAuth1Service( consumer_key=self.consumer_key, consumer_secret=self.consumer_secret, request_token_url=self.request_token_url, access_token_url=self.access_token_url, authorize_url=self.authorize_url, ) session = ...
def get_access_tokens(self, oauth_verifier)
Wrapper around get_auth_session, returns session, and sets access_token and access_token_secret on the QB Object. :param oauth_verifier: the oauth_verifier as specified by OAuth 1.0a
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auth_service = OAuth2Service( name='quickbooks', client_id=self.client_id, client_secret=self.client_secret, authorize_url=self.authorize_url, access_token_url=self.access_token_url, base_url=self.base_url, ) param...
def get_authorize_url(self, callback_url, state=None)
Returns the Authorize URL as returned by QB, and specified by OAuth 2.0a. :return URI:
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if isinstance(obj, dict): data = {} for (k, v) in obj.items(): data[k] = to_dict(v, classkey) return data elif hasattr(obj, "_ast"): return to_dict(obj._ast()) elif hasattr(obj, "__iter__") and not isinstance(obj, str): return [to_dict(v, classkey) fo...
def to_dict(obj, classkey=None)
Recursively converts Python object into a dictionary
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return lambda obj: dict((k, v) for k, v in obj.__dict__.items() if not k.startswith('_') and getattr(obj, k) is not None)
def json_filter(self)
filter out properties that have names starting with _ or properties that have a value of None
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return cls.where("", start_position=start_position, max_results=max_results, qb=qb)
def all(cls, start_position="", max_results=100, qb=None)
:param start_position: :param max_results: The max number of entities that can be returned in a response is 1000. :param qb: :return: Returns list
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return cls.where(build_where_clause(**kwargs), start_position=start_position, max_results=max_results, qb=qb)
def filter(cls, start_position="", max_results="", qb=None, **kwargs)
:param start_position: :param max_results: :param qb: :param kwargs: field names and values to filter the query :return: Filtered list
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return cls.where(build_choose_clause(choices, field), qb=qb)
def choose(cls, choices, field="Id", qb=None)
:param choices: :param field: :param qb: :return: Filtered list
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if where_clause: where_clause = "WHERE " + where_clause if start_position: start_position = " STARTPOSITION " + str(start_position) if max_results: max_results = " MAXRESULTS " + str(max_results) select = "SELECT * FROM {0} {1}{2}{3}".forma...
def where(cls, where_clause="", start_position="", max_results="", qb=None)
:param where_clause: QBO SQL where clause (DO NOT include 'WHERE') :param start_position: :param max_results: :param qb: :return: Returns list filtered by input where_clause
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if not qb: qb = QuickBooks() json_data = qb.query(select) obj_list = [] if cls.qbo_object_name in json_data["QueryResponse"]: for item_json in json_data["QueryResponse"][cls.qbo_object_name]: obj_list.append(cls.from_json(item_json)) ...
def query(cls, select, qb=None)
:param select: QBO SQL query select statement :param qb: :return: Returns list
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if not qb: qb = QuickBooks() if where_clause: where_clause = "WHERE " + where_clause select = "SELECT COUNT(*) FROM {0} {1}".format( cls.qbo_object_name, where_clause) json_data = qb.query(select) if "totalCount" in json_data["Quer...
def count(cls, where_clause="", qb=None)
:param where_clause: QBO SQL where clause (DO NOT include 'WHERE') :param qb: :return: Returns database record count
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url = self.current_user_url result = self.get(url) return result
def get_current_user(self)
Get data from the current user endpoint
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if qs is None: qs = {} url = self.api_url + "/company/{0}/reports/{1}".format(self.company_id, report_type) result = self.get(url, params=qs) return result
def get_report(self, report_type, qs=None)
Get data from the report endpoint
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url = self.disconnect_url result = self.get(url) return result
def disconnect_account(self)
Disconnect current account from the application :return:
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url = self.reconnect_url result = self.get(url) return result
def reconnect_account(self)
Reconnect current account by refreshing OAuth access tokens :return:
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return (math.cos(lat * math.pi / 180.0) * 2 * math.pi * 6378137) / ( tilesize * 2 ** zoom )
def _meters_per_pixel(zoom, lat=0.0, tilesize=256)
Return the pixel resolution for a given mercator tile zoom and lattitude. Parameters ---------- zoom: int Mercator zoom level lat: float, optional Latitude in decimal degree (default: 0) tilesize: int, optional Mercator tile size (default: 256). Returns ------- ...
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for z in range(max_z): if pixel_size > _meters_per_pixel(z, 0, tilesize=tilesize): return max(0, z - 1) # We don't want to scale up return max_z - 1
def zoom_for_pixelsize(pixel_size, max_z=24, tilesize=256)
Get mercator zoom level corresponding to a pixel resolution. Freely adapted from https://github.com/OSGeo/gdal/blob/b0dfc591929ebdbccd8a0557510c5efdb893b852/gdal/swig/python/scripts/gdal2tiles.py#L294 Parameters ---------- pixel_size: float Pixel size max_z: int, optional (default: 24)...
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bounds = transform_bounds( *[src_dst.crs, "epsg:4326"] + list(src_dst.bounds), densify_pts=21 ) center = [(bounds[0] + bounds[2]) / 2, (bounds[1] + bounds[3]) / 2] lat = center[1] if ensure_global_max_zoom else 0 dst_affine, w, h = calculate_default_transform( src_dst.crs, "eps...
def get_zooms(src_dst, ensure_global_max_zoom=False, tilesize=256)
Calculate raster min/max mercator zoom level. Parameters ---------- src_dst: rasterio.io.DatasetReader Rasterio io.DatasetReader object ensure_global_max_zoom: bool, optional Apply latitude correction factor to ensure max_zoom equality for global datasets covering different lati...
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with rasterio.open(address) as src: wgs_bounds = transform_bounds( *[src.crs, "epsg:4326"] + list(src.bounds), densify_pts=21 ) return {"url": address, "bounds": list(wgs_bounds)}
def bounds(address)
Retrieve image bounds. Attributes ---------- address : str file url. Returns ------- out : dict dictionary with image bounds.
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info = {"address": address} info.update(utils.raster_get_stats(address, percentiles=(pmin, pmax), **kwargs)) return info
def metadata(address, pmin=2, pmax=98, **kwargs)
Return image bounds and band statistics. Attributes ---------- address : str or PathLike object A dataset path or URL. Will be opened in "r" mode. pmin : int, optional, (default: 2) Histogram minimum cut. pmax : int, optional, (default: 98) Histogram maximum cut. kwargs ...
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with rasterio.open(address) as src: wgs_bounds = transform_bounds( *[src.crs, "epsg:4326"] + list(src.bounds), densify_pts=21 ) if not utils.tile_exists(wgs_bounds, tile_z, tile_x, tile_y): raise TileOutsideBounds( "Tile {}/{}/{} is outside image...
def tile(address, tile_x, tile_y, tile_z, tilesize=256, **kwargs)
Create mercator tile from any images. Attributes ---------- address : str file url. tile_x : int Mercator tile X index. tile_y : int Mercator tile Y index. tile_z : int Mercator tile ZOOM level. tilesize : int, optional (default: 256) Output image siz...
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sample, edges = np.histogram(arr[~arr.mask], **kwargs) return { "pc": np.percentile(arr[~arr.mask], percentiles).astype(arr.dtype).tolist(), "min": arr.min().item(), "max": arr.max().item(), "std": arr.std().item(), "histogram": [sample.tolist(), edges.tolist()], ...
def _stats(arr, percentiles=(2, 98), **kwargs)
Calculate array statistics. Attributes ---------- arr: numpy ndarray Input array data to get the stats from. percentiles: tuple, optional Tuple of Min/Max percentiles to compute. kwargs: dict, optional These will be passed to the numpy.histogram function. Returns --...
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dst_transform, _, _ = calculate_default_transform( src_dst.crs, bounds_crs, src_dst.width, src_dst.height, *src_dst.bounds ) w, s, e, n = bounds vrt_width = math.ceil((e - w) / dst_transform.a) vrt_height = math.ceil((s - n) / dst_transform.e) vrt_transform = transform.from_bounds(...
def get_vrt_transform(src_dst, bounds, bounds_crs="epsg:3857")
Calculate VRT transform. Attributes ---------- src_dst : rasterio.io.DatasetReader Rasterio io.DatasetReader object bounds : list Bounds (left, bottom, right, top) bounds_crs : str Coordinate reference system string (default "epsg:3857") Returns ------- vrt_tran...
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if ( any([MaskFlags.alpha in flags for flags in src_dst.mask_flag_enums]) or ColorInterp.alpha in src_dst.colorinterp ): return True return False
def has_alpha_band(src_dst)
Check for alpha band or mask in source.
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if isinstance(indexes, int): indexes = [indexes] elif isinstance(indexes, tuple): indexes = list(indexes) vrt_params = dict( add_alpha=True, crs="epsg:3857", resampling=Resampling[resampling_method] ) vrt_transform, vrt_width, vrt_height = get_vrt_transform(src_dst, bo...
def _tile_read( src_dst, bounds, tilesize, indexes=None, nodata=None, resampling_method="bilinear" )
Read data and mask. Attributes ---------- src_dst : rasterio.io.DatasetReader rasterio.io.DatasetReader object bounds : list Mercator tile bounds (left, bottom, right, top) tilesize : int Output image size indexes : list of ints or a single int, optional, (defaults: None...
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if isinstance(source, DatasetReader): return _tile_read(source, bounds, tilesize, **kwargs) else: with rasterio.open(source) as src_dst: return _tile_read(src_dst, bounds, tilesize, **kwargs)
def tile_read(source, bounds, tilesize, **kwargs)
Read data and mask. Attributes ---------- source : str or rasterio.io.DatasetReader input file path or rasterio.io.DatasetReader object bounds : list Mercator tile bounds (left, bottom, right, top) tilesize : int Output image size kwargs: dict, optional These wil...
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imin, imax = in_range omin, omax = out_range image = np.clip(image, imin, imax) - imin image = image / np.float(imax - imin) return image * (omax - omin) + omin
def linear_rescale(image, in_range=(0, 1), out_range=(1, 255))
Linear rescaling. Attributes ---------- image : numpy ndarray Image array to rescale. in_range : list, int, optional, (default: [0,1]) Image min/max value to rescale. out_range : list, int, optional, (default: [1,255]) output min/max bounds to rescale to. Returns --...
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mintile = mercantile.tile(bounds[0], bounds[3], tile_z) maxtile = mercantile.tile(bounds[2], bounds[1], tile_z) return ( (tile_x <= maxtile.x + 1) and (tile_x >= mintile.x) and (tile_y <= maxtile.y + 1) and (tile_y >= mintile.y) )
def tile_exists(bounds, tile_z, tile_x, tile_y)
Check if a mercatile tile is inside a given bounds. Attributes ---------- bounds : list WGS84 bounds (left, bottom, right, top). x : int Mercator tile Y index. y : int Mercator tile Y index. z : int Mercator tile ZOOM level. Returns ------- out : boo...
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res = np.zeros((arr.shape[1], arr.shape[2], 3), dtype=np.uint8) for k, v in cmap.items(): res[arr[0] == k] = v return np.transpose(res, [2, 0, 1])
def _apply_discrete_colormap(arr, cmap)
Apply discrete colormap. Attributes ---------- arr : numpy.ndarray 1D image array to convert. color_map: dict Discrete ColorMap dictionary e.g: { 1: [255, 255, 255], 2: [255, 0, 0] } Returns ------- arr: numpy.ndarray
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img_format = img_format.lower() if len(arr.shape) < 3: arr = np.expand_dims(arr, axis=0) if color_map is not None and isinstance(color_map, dict): arr = _apply_discrete_colormap(arr, color_map) elif color_map is not None: arr = np.transpose(color_map[arr][0], [2, 0, 1]).as...
def array_to_image( arr, mask=None, img_format="png", color_map=None, **creation_options )
Translate numpy ndarray to image buffer using GDAL. Usage ----- tile, mask = rio_tiler.utils.tile_read(......) with open('test.jpg', 'wb') as f: f.write(array_to_image(tile, mask, img_format="jpeg")) Attributes ---------- arr : numpy ndarray Image array to encode. mask:...
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cmap_file = os.path.join(os.path.dirname(__file__), "cmap", "{0}.txt".format(name)) with open(cmap_file) as cmap: lines = cmap.read().splitlines() colormap = [ list(map(int, line.split())) for line in lines if not line.startswith("#") ][1:] cmap = list(np.array(colo...
def get_colormap(name="cfastie", format="pil")
Return Pillow or GDAL compatible colormap array. Attributes ---------- name : str, optional Colormap name (default: cfastie) format: str, optional Compatiblity library, should be "pil" or "gdal" (default: pil). Returns ------- colormap : list or numpy.array Color ma...
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arr = np.clip(arr + 32768.0, 0.0, 65535.0) r = arr / 256 g = arr % 256 b = (arr * 256) % 256 return np.stack([r, g, b]).astype(np.uint8)
def mapzen_elevation_rgb(arr)
Encode elevation value to RGB values compatible with Mapzen tangram. Attributes ---------- arr : numpy ndarray Image array to encode. Returns ------- out : numpy ndarray RGB array (3, h, w)
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if not expr: raise Exception("Missing expression") bands_names = tuple(set(re.findall(r"b(?P<bands>[0-9A]{1,2})", expr))) rgb = expr.split(",") if sceneid.startswith("L"): from rio_tiler.landsat8 import tile as l8_tile arr, mask = l8_tile( sceneid, tile_x, til...
def expression(sceneid, tile_x, tile_y, tile_z, expr=None, **kwargs)
Apply expression on data. Attributes ---------- sceneid : str Landsat id, Sentinel id, CBERS ids or file url. tile_x : int Mercator tile X index. tile_y : int Mercator tile Y index. tile_z : int Mercator tile ZOOM level. expr : str, required Expressi...
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def _calculateRatio(rgb, pan, weight): return pan / ((rgb[0] + rgb[1] + rgb[2] * weight) / (2 + weight)) with np.errstate(invalid="ignore", divide="ignore"): ratio = _calculateRatio(rgb, pan, weight) return np.clip(ratio * rgb, 0, np.iinfo(pan_dtype).max).astype(pan_dtype)
def pansharpening_brovey(rgb, pan, weight, pan_dtype)
Brovey Method: Each resampled, multispectral pixel is multiplied by the ratio of the corresponding panchromatic pixel intensity to the sum of all the multispectral intensities. Original code from https://github.com/mapbox/rio-pansharpen
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if not re.match("^S2[AB]_tile_[0-9]{8}_[0-9]{2}[A-Z]{3}_[0-9]$", sceneid): raise InvalidSentinelSceneId("Could not match {}".format(sceneid)) sentinel_pattern = ( r"^S" r"(?P<sensor>\w{1})" r"(?P<satellite>[AB]{1})" r"_tile_" r"(?P<acquisitionYear>[0-9]{4})...
def _sentinel_parse_scene_id(sceneid)
Parse Sentinel-2 scene id. Attributes ---------- sceneid : str Sentinel-2 sceneid. Returns ------- out : dict dictionary with metadata constructed from the sceneid. e.g: _sentinel_parse_scene_id('S2A_tile_20170323_07SNC_0') { "acquisitionDay...
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scene_params = _sentinel_parse_scene_id(sceneid) sentinel_address = "{}/{}".format(SENTINEL_BUCKET, scene_params["key"]) with rasterio.open("{}/preview.jp2".format(sentinel_address)) as src: wgs_bounds = transform_bounds( *[src.crs, "epsg:4326"] + list(src.bounds), densify_pts=21 ...
def bounds(sceneid)
Retrieve image bounds. Attributes ---------- sceneid : str Sentinel-2 sceneid. Returns ------- out : dict dictionary with image bounds.
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4.051224
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with rasterio.open(src_path) as src: arr = src.read(indexes=[1], masked=True) arr[arr == 0] = np.ma.masked params = {} if histogram_bins: params.update(dict(bins=histogram_bins)) if histogram_range: params.update(dict(range=histogram_range)) return {1: utils._...
def _sentinel_stats( src_path, percentiles=(2, 98), histogram_bins=10, histogram_range=None )
src_path : str or PathLike object A dataset path or URL. Will be opened in "r" mode.
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scene_params = _sentinel_parse_scene_id(sceneid) sentinel_address = "{}/{}".format(SENTINEL_BUCKET, scene_params["key"]) dst_crs = CRS({"init": "EPSG:4326"}) with rasterio.open("{}/preview.jp2".format(sentinel_address)) as src: bounds = transform_bounds( *[src.crs, dst_crs] + l...
def metadata(sceneid, pmin=2, pmax=98, **kwargs)
Retrieve image bounds and band statistics. Attributes ---------- sceneid : str Sentinel-2 sceneid. pmin : int, optional, (default: 2) Histogram minimum cut. pmax : int, optional, (default: 98) Histogram maximum cut. kwargs : optional These are passed to 'rio_tile...
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if not isinstance(bands, tuple): bands = tuple((bands,)) for band in bands: if band not in SENTINEL_BANDS: raise InvalidBandName("{} is not a valid Sentinel band name".format(band)) scene_params = _sentinel_parse_scene_id(sceneid) sentinel_address = "{}/{}".format(SENT...
def tile(sceneid, tile_x, tile_y, tile_z, bands=("04", "03", "02"), tilesize=256)
Create mercator tile from Sentinel-2 data. Attributes ---------- sceneid : str Sentinel-2 sceneid. tile_x : int Mercator tile X index. tile_y : int Mercator tile Y index. tile_z : int Mercator tile ZOOM level. bands : tuple, str, optional (default: ('04', '03...
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scene_params = _landsat_parse_scene_id(sceneid) meta_file = "http://landsat-pds.s3.amazonaws.com/{}_MTL.txt".format( scene_params["key"] ) metadata = str(urlopen(meta_file).read().decode()) return toa_utils._parse_mtl_txt(metadata)
def _landsat_get_mtl(sceneid)
Get Landsat-8 MTL metadata. Attributes ---------- sceneid : str Landsat sceneid. For scenes after May 2017, sceneid have to be LANDSAT_PRODUCT_ID. Returns ------- out : dict returns a JSON like object with the metadata.
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pre_collection = r"(L[COTEM]8\d{6}\d{7}[A-Z]{3}\d{2})" collection_1 = r"(L[COTEM]08_L\d{1}[A-Z]{2}_\d{6}_\d{8}_\d{8}_\d{2}_(T1|T2|RT))" if not re.match("^{}|{}$".format(pre_collection, collection_1), sceneid): raise InvalidLandsatSceneId("Could not match {}".format(sceneid)) precollection_...
def _landsat_parse_scene_id(sceneid)
Parse Landsat-8 scene id. Author @perrygeo - http://www.perrygeo.com
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meta_data = _landsat_get_mtl(sceneid).get("L1_METADATA_FILE") info = {"sceneid": sceneid} info["bounds"] = toa_utils._get_bounds_from_metadata(meta_data["PRODUCT_METADATA"]) return info
def bounds(sceneid)
Retrieve image bounds. Attributes ---------- sceneid : str Landsat sceneid. For scenes after May 2017, sceneid have to be LANDSAT_PRODUCT_ID. Returns ------- out : dict dictionary with image bounds.
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scene_params = _landsat_parse_scene_id(sceneid) meta_data = _landsat_get_mtl(sceneid).get("L1_METADATA_FILE") path_prefix = "{}/{}".format(LANDSAT_BUCKET, scene_params["key"]) info = {"sceneid": sceneid} _stats_worker = partial( _landsat_stats, address_prefix=path_prefix, ...
def metadata(sceneid, pmin=2, pmax=98, **kwargs)
Retrieve image bounds and band statistics. Attributes ---------- sceneid : str Landsat sceneid. For scenes after May 2017, sceneid have to be LANDSAT_PRODUCT_ID. pmin : int, optional, (default: 2) Histogram minimum cut. pmax : int, optional, (default: 98) Histogram m...
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if not re.match(r"^CBERS_4_\w+_[0-9]{8}_[0-9]{3}_[0-9]{3}_L[0-9]$", sceneid): raise InvalidCBERSSceneId("Could not match {}".format(sceneid)) cbers_pattern = ( r"(?P<satellite>\w+)_" r"(?P<mission>[0-9]{1})" r"_" r"(?P<instrument>\w+)" r"_" r"(?P<acq...
def _cbers_parse_scene_id(sceneid)
Parse CBERS scene id. Attributes ---------- sceneid : str CBERS sceneid. Returns ------- out : dict dictionary with metadata constructed from the sceneid. e.g: _cbers_parse_scene_id('CBERS_4_PAN5M_20171121_057_094_L2') { "acquisitionDay": "2...
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scene_params = _cbers_parse_scene_id(sceneid) cbers_address = "{}/{}".format(CBERS_BUCKET, scene_params["key"]) with rasterio.open( "{}/{}_BAND{}.tif".format( cbers_address, sceneid, scene_params["reference_band"] ) ) as src: wgs_bounds = transform_bounds( ...
def bounds(sceneid)
Retrieve image bounds. Attributes ---------- sceneid : str CBERS sceneid. Returns ------- out : dict dictionary with image bounds.
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scene_params = _cbers_parse_scene_id(sceneid) cbers_address = "{}/{}".format(CBERS_BUCKET, scene_params["key"]) bands = scene_params["bands"] ref_band = scene_params["reference_band"] info = {"sceneid": sceneid} addresses = [ "{}/{}_BAND{}.tif".format(cbers_address, sceneid, band)...
def metadata(sceneid, pmin=2, pmax=98, **kwargs)
Return band bounds and statistics. Attributes ---------- sceneid : str CBERS sceneid. pmin : int, optional, (default: 2) Histogram minimum cut. pmax : int, optional, (default: 98) Histogram maximum cut. kwargs : optional These are passed to 'rio_tiler.utils.raste...
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3.541292
1.019547
datasets = __get_data_folder_path() + 'datasets.csv' df = pd.read_csv(datasets) df = df[['Item', 'Title']] df.columns = ['dataset_id', 'title'] # print('a list of the available datasets:') return df
def __datasets_desc()
return a df of the available datasets with description
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return dict([(x.strip(), y.strip()) for x, y in [z.split(':', 1) for z in style.split(';') if ':' in z]]);
def dumb_property_dict(style)
returns a hash of css attributes
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3.220108
1.094384
# remove @import sentences data += ';' importIndex = data.find('@import') while importIndex != -1: data = data[0:importIndex] + data[data.find(';', importIndex) + 1:] importIndex = data.find('@import') # parse the css. reverted from dictionary compehension in order to support o...
def dumb_css_parser(data)
returns a hash of css selectors, each of which contains a hash of css attributes
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1.015938
style = parent_style.copy() if 'class' in attrs: for css_class in attrs['class'].split(): css_style = style_def['.' + css_class] style.update(css_style) if 'style' in attrs: immediate_style = dumb_property_dict(attrs['style']) style.update(immediate_style...
def element_style(attrs, style_def, parent_style)
returns a hash of the 'final' style attributes of the element
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3.176614
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emphasis = [] if 'text-decoration' in style: emphasis.append(style['text-decoration']) if 'font-style' in style: emphasis.append(style['font-style']) if 'font-weight' in style: emphasis.append(style['font-weight']) return emphasis
def google_text_emphasis(style)
return a list of all emphasis modifiers of the element
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font_family = '' if 'font-family' in style: font_family = style['font-family'] if 'Courier New' == font_family or 'Consolas' == font_family: return True return False
def google_fixed_width_font(style)
check if the css of the current element defines a fixed width font
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text = md_backslash_matcher.sub(r"\\\1", text) if snob: text = md_chars_matcher_all.sub(r"\\\1", text) text = md_dot_matcher.sub(r"\1\\\2", text) text = md_plus_matcher.sub(r"\1\\\2", text) text = md_dash_matcher.sub(r"\1\\\2", text) return text
def escape_md_section(text, snob=False)
Escapes markdown-sensitive characters across whole document sections.
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if not has_key(attrs, 'href'): return None i = -1 for a in self.a: i += 1 match = 0 if has_key(a, 'href') and a['href'] == attrs['href']: if has_key(a, 'title') or has_key(attrs, 'title'): if (has_key(a, 'titl...
def previousIndex(self, attrs)
returns the index of certain set of attributes (of a link) in the self.a list If the set of attributes is not found, returns None
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tag_emphasis = google_text_emphasis(tag_style) parent_emphasis = google_text_emphasis(parent_style) # handle Google's text emphasis strikethrough = 'line-through' in tag_emphasis and self.hide_strikethrough bold = 'bold' in tag_emphasis and not 'bold' in parent_emphasi...
def handle_emphasis(self, start, tag_style, parent_style)
handles various text emphases
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nest_count = 0 if 'margin-left' in style: nest_count = int(style['margin-left'][:-2]) / self.google_list_indent return nest_count
def google_nest_count(self, style)
calculate the nesting count of google doc lists
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if not self.body_width: return text assert wrap, "Requires Python 2.3." result = '' newlines = 0 for para in text.split("\n"): if len(para) > 0: if not skipwrap(para): result += "\n".join(wrap(para, self.body_w...
def optwrap(self, text)
Wrap all paragraphs in the provided text.
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ratio = SM(None, str(w1).lower(), str(w2).lower()).ratio() return ratio if ratio > threshold else 0
def similarity(w1, w2, threshold=0.5)
compare two strings 'words', and return ratio of smiliarity, be it larger than the threshold, or 0 otherwise. NOTE: if the result more like junk, increase the threshold value.
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similars = {s2: similarity(s1, s2) for s2 in dlist if similarity(s1, s2)} # a list of tuples [(similar_word, ratio) .. ] top_match = Counter(similars).most_common(MAX_SIMILARS+1) return top_match
def search_similar(s1, dlist=DATASET_IDS, MAX_SIMILARS=10)
Returns the top MAX_SIMILARS [(dataset_id : smilarity_ratio)] to s1
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if item: try: if show_doc: __print_item_docs(item) return df = __read_csv(item) return df except KeyError: find_similar(item) else: return __datasets_desc()
def data(item=None, show_doc=False)
loads a datasaet (from in-modules datasets) in a dataframe data structure. Args: item (str) : name of the dataset to load. show_doc (bool) : to show the dataset's documentation. Examples: >>> iris = data('iris') >>> data('titanic', show_doc=True) : returns the dataset's...
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if p2.ndim < 2: p2 = p2[np.newaxis, :] '''p2 can be a vector''' area = 0.5 * np.abs(p0[0] * p1[1] - p0[0] * p2[:,1] + p1[0] * p2[:,1] - p1[0] * p0[1] + p2[:,0] * p0[1] - p2[:,0] * p1[1]) return area
def triangle_area(p0, p1, p2)
p2 can be a vector
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'''which points are inside ROI''' if Y.ndim > 1: area = np.zeros((Y.shape[0],4)) else: area = np.zeros((1,4)) pts = np.zeros((0,), int) pdist = np.zeros((0,), int) dist0 = 0 for k in range(len(self.prect)): self.square_area = (t...
def inROI(self, Y)
which points are inside ROI
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'''remove ROI''' parent.p0.removeItem(self.ROIplot) parent.p0.removeItem(self.dotplot)
def remove(self, parent)
remove ROI
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'''compute a wrapped distance''' q1 = np.mod(kx, nc) q2 = np.minimum(q1, nc-q1) return q2
def dwrap(kx,nc)
compute a wrapped distance
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self.fit(X, u, sv, v) return self.embedding
def fit_transform(self, X, u=None, sv=None, v=None)
Fit X into an embedded space and return that transformed output. Inputs ---------- X : array, shape (n_samples, n_features). X contains a sample per row. Returns ------- embedding : array, shape (n_samples, n_components) Embedding of the training data...
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iclustup = [] dims = self.n_components if hasattr(self, 'isort1'): if X.shape[1] == self.v.shape[0]: # reduce dimensionality of X X = X @ self.v nclust = self.n_X AtS = self.A.T @ self.S vnorm ...
def transform(self, X)
if already fit, can add new points and see where they fall
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X = X.copy() X -= X.mean(axis=0) if self.mode is 'parallel': Xall = X.copy() X = np.reshape(Xall.copy(), (-1, Xall.shape[-1])) #X -= X.mean(axis=-1)[:,np.newaxis] if ((u is None)): # compute svd and keep iPC's of data nmin...
def fit(self, X=None, u=None, s = None)
Fit X into an embedded space. Inputs ---------- X : array, shape (n_samples, n_features) u,s,v : svd decomposition of X (optional) Assigns ---------- embedding : array-like, shape (n_samples, n_components) Stores the embedding vectors. u,sv,v ...
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X = X.copy() if self.mode is 'parallel': Xall = X.copy() X = np.reshape(Xall.copy(), (-1, Xall.shape[-1])) #X -= X.mean(axis=-1)[:,np.newaxis] if ((u is None)): nmin = min([X.shape[0], X.shape[1]]) nmin = np.minimum(nmin-1, self.nP...
def fit(self, X=None, u=None)
Fit X into an embedded space. Inputs ---------- X : array, shape (n_samples, n_features) u,s,v : svd decomposition of X (optional) Assigns ---------- embedding : array-like, shape (n_samples, n_components) Stores the embedding vectors. u,sv,v ...
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if self.mode is 'parallel': Xall = X.copy() X = np.reshape(Xall.copy(), (-1, Xall.shape[-1])) #X -= X.mean(axis=-1)[:,np.newaxis] if (u is None) or (sv is None) or (v is None): # compute svd and keep iPC's of data nmin = min([X.shape[0],X....
def fit(self, X, u=None, sv=None, v=None)
Fit X into an embedded space. Parameters ---------- X : array, shape (n_samples, n_features) y : Ignored
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self.fit(X, u) return self.embedding
def fit_transform(self, X, u=None)
Fit X into an embedded space and return that transformed output. Inputs ---------- X : array, shape (n_samples, n_features). X contains a sample per row. Returns ------- embedding : array, shape (n_samples, n_components) Embedding of the training data...
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if self.mode is 'parallel': Xall = X.copy() X = np.reshape(Xall.copy(), (-1, Xall.shape[-1])) #X -= X.mean(axis=-1)[:,np.newaxis] if ((u is None)): # compute svd and keep iPC's of data nmin = min([X.shape[0], X.shape[1]]) nmin ...
def fit(self, X=None, u=None, sv=None, v=None)
Fit X into an embedded space. Inputs ---------- X : array, shape (n_samples, n_features) u,s,v : svd decomposition of X (optional) Assigns ---------- embedding : array-like, shape (n_samples, n_components) Stores the embedding vectors. u,sv,v ...
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1.043112
X = X.copy() if self.mode is 'parallel': Xall = X.copy() X = np.reshape(Xall.copy(), (-1, Xall.shape[-1])) #X -= X.mean(axis=-1)[:,np.newaxis] if ((u is None)): # compute svd and keep iPC's of data nmin = min([X.shape[0], X.shape[1...
def fit(self, X=None, u=None, s = None)
Fit X into an embedded space. Inputs ---------- X : array, shape (n_samples, n_features) u,s,v : svd decomposition of X (optional) Assigns ---------- embedding : array-like, shape (n_samples, n_components) Stores the embedding vectors. u,sv,v ...
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flip = False choose = False zoom = False replot = False items = self.win.scene().items(event.scenePos()) posx = 0 posy = 0 iplot = 0 if self.loaded: # print(event.modifiers() == QtCore.Qt.ControlModifier) for x in i...
def plot_clicked(self, event)
left-click chooses a cell, right-click flips cell to other view
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if socks_endpoint is None: raise ValueError( "Must provide socks_endpoint as Deferred or IStreamClientEndpoint" ) if circuit is not None: factory = _AgentEndpointFactoryForCircuit(reactor, socks_endpoint, circuit) else: factory = _AgentEndpointFactoryUsingTo...
def tor_agent(reactor, socks_endpoint, circuit=None, pool=None)
This is the low-level method used by :meth:`txtorcon.Tor.web_agent` and :meth:`txtorcon.Circuit.web_agent` -- probably you should call one of those instead. :returns: a Deferred that fires with an object that implements :class:`twisted.web.iweb.IAgent` and is thus suitable for passing t...
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# :param tls: True (the default) will use Twisted's default options # with the hostname in the URI -- that is, TLS verification # similar to a Browser. Otherwise, you can pass whatever Twisted # returns for `optionsForClientTLS # <https://twistedmatrix.com/documents/current/api/...
def agent_for_socks_port(reactor, torconfig, socks_config, pool=None)
This returns a Deferred that fires with an object that implements :class:`twisted.web.iweb.IAgent` and is thus suitable for passing to ``treq`` as the ``agent=`` kwarg. Of course can be used directly; see `using Twisted web cliet <http://twistedmatrix.com/documents/current/web/howto/client.html>`_. If ...
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''' Overrides nevow method; not really safe to just save ctx, client in self for multiple clients, but nice and simple. ''' self.ctx = ctx self.client = client
def goingLive(self, ctx, client)
Overrides nevow method; not really safe to just save ctx, client in self for multiple clients, but nice and simple.
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if IStreamClientEndpoint.providedBy(connection): endpoint = connection elif isinstance(connection, tuple): if len(connection) == 2: reactor, socket = connection if (os.path.exists(socket) and os.stat(socket).st_mode & (stat.S_IRGRP | stat.S_IRUSR | ...
def build_tor_connection(connection, build_state=True, wait_for_proto=True, password_function=lambda: None)
This is used to build a valid TorState (which has .protocol for the TorControlProtocol). For example:: from twisted.internet import reactor from twisted.internet.endpoints import TCP4ClientEndpoint import txtorcon def example(state): print "Fully bootstrapped state:",st...
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try: return build_tor_connection((reactor, socket), *args, **kwargs) except Exception: return build_tor_connection((reactor, host, port), *args, **kwargs)
def build_local_tor_connection(reactor, host='127.0.0.1', port=9051, socket='/var/run/tor/control', *args, **kwargs)
This builds a connection to a local Tor, either via 127.0.0.1:9051 or /var/run/tor/control (by default; the latter is tried first). See also :meth:`build_tor_connection <txtorcon.torstate.build_tor_connection>` for other key-word arguments that are accepted here also. **Note**: new code should use ...
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if len(kw) == 0: return '' flags = '' for (k, v) in kw.items(): if v: flags += ' ' + str(k) # note that we want the leading space if there's at least one # flag. return flags
def flags_from_dict(kw)
This turns a dict with keys that are flags (e.g. for CLOSECIRCUIT, CLOSESTREAM) only if the values are true.
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rtn = {} key = None value = '' # FIXME could use some refactoring to reduce code duplication! for line in lines.split('\n'): if line.strip() == 'OK': continue sp = line.split('=', 1) found_key = ('=' in line and ' ' not in sp[0]) if found_key and ke...
def parse_keywords(lines, multiline_values=True, key_hints=None)
Utility method to parse name=value pairs (GETINFO etc). Takes a string with newline-separated lines and expects at most one = sign per line. Accumulates multi-line values. :param multiline_values: The default is True which allows for multi-line values until a line with the next = sign on it...
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args = data.split()[1:] try: self._relay_attrs['ip_v6'].extend(args) except KeyError: self._relay_attrs['ip_v6'] = list(args)
def _router_address(self, data)
only for IPv6 addresses
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1.200985
listener = IStreamListener(listen) if listener not in self.listeners: self.listeners.append(listener)
def listen(self, listen)
Attach an :class:`txtorcon.interface.IStreamListener` to this stream. See also :meth:`txtorcon.TorState.add_stream_listener` to listen to all streams. :param listen: something that knows :class:`txtorcon.interface.IStreamListener`
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self._closing_deferred = defer.Deferred() def close_command_is_queued(*args): return self._closing_deferred d = self.circuit_container.close_stream(self, **kw) d.addCallback(close_command_is_queued) return self._closing_deferred
def close(self, **kw)
This asks Tor to close the underlying stream object. See :meth:`txtorcon.interface.ITorControlProtocol.close_stream` for details. Although Tor currently takes no flags, it allows you to; any keyword arguments are passed through as flags. NOTE that the callback delivered from th...
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1.096739
flags = {} for k in kw.keys(): flags[k] = kw[k] flags[k.lower()] = flags[k] return flags
def _create_flags(self, kw)
this clones the kw dict, adding a lower-case version of every key (duplicated in circuit.py; consider putting in util?)
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