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utils.load_nifty(filename)
np.rint(mask)
mask.astype(np.uint8)
utils.save_nifty(filename, mask, affine, spacing, header)
utils.load_nifty(filename)
utils.save_nifty(filename, mask, affine, spacing, header)
tmp("/gris/gris-f/homelv/kgotkows/datasets/nnUnet_datasets/nnUNet_raw_data/nnUNet_raw_data/Task077_frankfurt3Guided/imagesTr/0001_0001.nii.gz")
tmp2("/gris/gris-f/homelv/kgotkows/datasets/nnUnet_datasets/nnUNet_raw_data/Task77_frankfurt3Guided/tmp/900.nii.gz")
requests.Session.request()
Version(urllib3.__version__)
Version("1.26.0")
Retry(**retry_kwargs)
HTTPAdapter(max_retries=retry)
requests.Session()
http.mount("https://", adapter)
http.mount("http://", adapter)
http.request(method, url, **kwargs)
limited (429)
unavailable (503)
error (500)
response (assumed to be JSON)
requests.Session.request()
encode("utf-8")
base64.standard_b64encode(basic_auth_str)
decode("utf-8")
dict({**_DEFAULT_HEADERS, **resolve_request_headers()
strip_suffix(hostname, "/")
MlflowException("API request to %s failed with exception %s" % (url, e)
_can_parse_as_json(string)
json.loads(string)
http_request_safe(host_creds, endpoint, method, **kwargs)
http_request(host_creds=host_creds, endpoint=endpoint, method=method, **kwargs)
verify_rest_response(response, endpoint)
verify_rest_response(response, endpoint)
_can_parse_as_json(response.text)
RestException(json.loads(response.text)
MlflowException("%s. Response body: '%s'" % (base_msg, response.text)
endpoints (e.g. DBFS file-download API)
endpoint.startswith(_REST_API_PATH_PREFIX)
_can_parse_as_json(response.text)
MlflowException("%s. Response body: '%s'" % (base_msg, response.text)
augmented_raise_for_status(response)
requests.response.raise_for_status()
response.raise_for_status()
HTTPError(f"{e}. Response text: {response.text}")
_get_path(path_prefix, endpoint_path)
format(path_prefix, endpoint_path)
extract_api_info_for_service(service, path_prefix)
tuple (path, HTTP method)
service_method.GetOptions()
_get_path(path_prefix, endpoint.path)
service()
GetRequestClass(service_method)
extract_all_api_info_for_service(service, path_prefix)
service_method.GetOptions()
service()
GetRequestClass(service_method)
_get_path(path_prefix, endpoint.path)
call_endpoint(host_creds, endpoint, method, json_body, response_proto)
json.loads(json_body)
verify_rest_response(response, endpoint)
json.loads(response.text)
parse_dict(js_dict=js_dict, message=response_proto)
call_endpoints(host_creds, endpoints, json_body, response_proto)
enumerate(endpoints)
call_endpoint(host_creds, endpoint, method, json_body, response_proto)
ErrorCode.Name(ENDPOINT_NOT_FOUND)
len(endpoints)
requests.Session.request()
method.lower()
in ("put", "get")
ValueError("Illegal http method: " + method)
MlflowException("API request failed with exception %s" % e)
MlflowHostCreds(object)
Hostname (e.g., http://localhost:5000)
file (.pem)
function (see https://requests.readthedocs.io/en/master/api/)
function (see https://requests.readthedocs.io/en/master/api/)
and (server_cert_path is not None)
p(s)
exp(-E(s)
E(s)
exp(-E(s)
metropolishastings_rw(logpdf, nsamps, initstate, pwidth, ninits)
logdensity.LogDensity(logpdf)
RandomWalkMH(logdens)
rwmh.sample_nd(nsamps, initstate, pwidth, ninits)
metropolishastings_lang(logpdf, loggrad, nsamps, initstate, pwidth, ninits)
logdensity.LogDensity(logpdf, loggrad)
LangevinMH(logdens)
langmh.sample_nd(nsamps, initstate, pwidth, ninits)
Riemannian (preconditioned)
logdensity.LogDensity(logpdf, loggrad, loghess)
PrecondLangevinMH(logdens)
plangmh.sample_nd(nsamps, initstate, pwidth, ninits)
logdensity.LogDensity(logpdf, loggrad)
HamiltonianMC(logdens, nsteps)
hmc.sample_nd(nsamps, initstate, stepsize, ninits)
logdensity.LogDensity(logpdf, loggrad, loghess)
PrecondHamiltonianMC(logdens, nsteps)