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sids.append(spw.GetUnsortedSpikes()
np.concatenate(sids)
len(sids)
ClusterChange(sids, spikes, message)
cc.save_old(clusters, s.norder, s.good)
len(clusters)
s.norder.index(clusters[0].id)
len(clusters)
np.asarray(cc.oldunids)
len(suids)
np.asarray([ s.neurons[suid].nspikes for suid in suids ])
spikecounts.argmax()
s.norder.index(newnid)
sum([ s.norder.index(oldunid)
spw.DelClusters(clusters, update=False)
self.uslist.clearSelection()
time.time()
spw.CreateCluster(update=False, id=newnid, inserti=inserti)
self.MoveSpikes2Neuron(sids, neuron, update=False)
spw.GetClusterPlotDims()
newcluster.update_pos()
cc.save_new([newcluster], s.norder, s.good)
spw.AddClusterChangeToStack(cc)
spw.UpdateClustersGUI()
spw.ColourPoints(newcluster)
print('applying clusters to plot took %.3f sec' % (time.time()
spw.SelectClusters(newcluster)
print(cc.message)
on_actionToggleClustersGood_triggered(self)
button (G)
spw.GetClusters()
cids.append(cluster.id)
self.nlist.updateAll()
print("Toggled 'good' flag of clusters %r" % cids)
on_actionLabelMultiunit_triggered(self)
spw.GetClusters()
len(clusters)
sids.append(cluster.neuron.sids)
np.concatenate(sids)
ClusterChange(sids, spikes, message)
cc.save_old(clusters, s.norder, s.good)
s.norder.index(clusters[0].id)
spw.DelClusters(clusters, update=False)
s.get_nextmuid()
spw.CreateCluster(update=False, id=muid, inserti=inserti)
self.MoveSpikes2Neuron(sids, neuron, update=False)
newcluster.update_pos()
newclusters.append(newcluster)
spw.SelectClusters(newclusters)
cc.save_new(newclusters, s.norder, s.good)
spw.AddClusterChangeToStack(cc)
print(cc.message)
on_actionChanSplitClusters_triggered(self)
button (/)
self.spykewindow.maxchansplit()
self.spykewindow.chancombosplit()
on_actionDensitySplit_triggered(self)
self.spykewindow.densitysplit()
on_actionRandomSplit_triggered(self)
self.spykewindow.randomsplit()
on_actionRenumber_triggered(self)
QApplication.instance()
keyboardModifiers()
self.renumber_selected_cluster()
self.renumber_all_clusters()
renumber_selected_cluster(self)
spw.GetCluster()
max(s.norder)
print("Choose a non-existing nid to renumber to")
spw.SelectClusters(cluster, on=False)
s.norder.index(oldid)
spw.ColourPoints(cluster)
spw.SelectClusters(cluster)
print('Renumbered neuron %d to %d' % (oldid, newid)
renumber_all_clusters(self)
multiunit (-ve number)
np.asarray(s.norder)
argsort()
argsort()
argsort()
argsort()
self.setUniformItemSizes(True)
np.concatenate([newmuids, newsuids])
np.all(oldids == newids)
print('Nothing to renumber: cluster IDs already ordered in y0 and contiguous')
np.concatenate([oldmuids, oldsuids])
spw.GetClusters()
spw.SelectClusters(selclusters, on=False)
s.remove_neuron(0)
print('Deleted junk cluster 0')
oldselids.remove(0)
s.clusters.copy()
spw.GetClusterPlotDims()
zip(oldids, newids)
int(newid)
s.norder.extend(sorted([ int(newid)
s.norder.extend(sorted([ int(newid)
spw.UpdateClustersGUI()
spw.ColourPoints(s.clusters.values()
selected (but now renumbered)