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consensus_100M
mszx
TODO
90
140,420,720,640
[ { "name": "consensus_00.mszx", "size": 1556203520, "sha256": "dda3814d59456907b631ed95f9f685447449b9f7065d6003c04c79ffa183e84b" }, { "name": "consensus_01.mszx", "size": 1591838720, "sha256": "c14cb5672190e7d7d73af180c7b1f49a904481bcc83c01986ffeb5f6f42072e8" }, { "name": "consens...

Consensus 100M (mszx)

A 100M-scale mass spectrometry consensus dataset, distributed as mszx archive shards for use with the msdatasets library.

Contents

  • 90 shards: consensus_00.mszx ... consensus_89.mszx
  • ~1.5 GB per shard, ~140 GB total
  • manifest.json — shard list with sizes and sha256 checksums
  • SHA256SUMSsha256sum-format file for direct verification

The shards are independent; row order across shards is not meaningful.

Loading with msdatasets

The Hugging Face download path will land in msdatasets shortly. Until then, shards can be fetched directly with huggingface_hub and pointed at any existing msdatasets mszx reader.

Once the HF source is wired up, usage will look like:

from msdatasets import download_dataset

ds = download_dataset("hf://chrisagrams/consensus-100M-mszx", store_as="mszx")

Manual download

from huggingface_hub import snapshot_download

local_dir = snapshot_download(
    repo_id="chrisagrams/consensus-100M-mszx",
    repo_type="dataset",
    allow_patterns=["*.mszx", "manifest.json", "SHA256SUMS"],
)

Verify integrity:

cd "$local_dir" && sha256sum -c SHA256SUMS

Format

mszx is the raw archive format produced by the msdatasets server. See the msdatasets documentation for the spec and reader implementation.

Citation

TODO

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