Datasets:
Delete meta_modulus.py
Browse files- meta_modulus.py +0 -71
meta_modulus.py
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import datasets
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import torch
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from torch_geometric.data import Data
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_CITATION = """\
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@article{metamatbench,
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title={MetamatBench: Integrating Heterogeneous Data, Computational Tools, and Visual Interface for Metamaterial Discovery},
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author={Chen, Jianpeng and Zhan, Wangzhi and Wang, Haohui and Jia, Zian and Gan, Jingru and Zhang, Junkai and Qi, Jingyuan and Chen, Tingwei and Huang, Lifu and Chen, Muhao and others},
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journal={arXiv preprint arXiv:2505.20299},
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year={2025}
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}
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"""
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_DESCRIPTION = """
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This dataset contains lattice structure data for predicting modulus properties, preprocessed into PyTorch Geometric (PyG) compatible format.
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"""
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class LatticeModulusDataset(datasets.GeneratorBasedBuilder):
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BUILDER_CONFIGS = [
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datasets.BuilderConfig(name="default", version=datasets.Version("1.0.0")),
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]
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def _info(self):
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return datasets.DatasetInfo(
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description=_DESCRIPTION,
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citation=_CITATION,
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features=datasets.Features({
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'frac_coords': datasets.Array2D(shape=(None, 3), dtype='float32'),
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'cart_coords': datasets.Array2D(shape=(None, 3), dtype='float32'),
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'node_feat': datasets.Array2D(shape=(None, 4), dtype='float32'),
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'node_type': datasets.Sequence(datasets.Value('int64')),
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'edge_feat': datasets.Array2D(shape=(None, 1), dtype='float32'),
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'edge_index': datasets.Array2D(shape=(2, None), dtype='int64'),
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'lengths': datasets.Array2D(shape=(1, 3), dtype='float32'),
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'num_nodes': datasets.Value('int64'),
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'num_atoms': datasets.Value('int64'),
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'angles': datasets.Array2D(shape=(1, 3), dtype='float32'),
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'vector': datasets.Array2D(shape=(1, 9), dtype='float32'),
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'y': datasets.Array2D(shape=(1, 12), dtype='float32'),
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'young': datasets.Array2D(shape=(1, 3), dtype='float32'),
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'shear': datasets.Array2D(shape=(1, 3), dtype='float32'),
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'poisson': datasets.Array2D(shape=(1, 6), dtype='float32'),
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}),
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)
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def _split_generators(self, dl_manager):
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file_path = dl_manager.download_and_extract('data.pkl')
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return [datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={'filepath': file_path})]
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def _generate_examples(self, filepath):
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dataset = torch.load(filepath)
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for idx, data in enumerate(dataset):
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yield idx, {
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'frac_coords': data.frac_coords.numpy(),
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'cart_coords': data.cart_coords.numpy(),
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'node_feat': data.node_feat.numpy(),
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'node_type': data.node_type.numpy().tolist(),
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'edge_feat': data.edge_feat.numpy(),
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'edge_index': data.edge_index.numpy(),
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'lengths': data.lengths.numpy(),
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'num_nodes': data.num_nodes,
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'num_atoms': data.num_atoms,
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'angles': data.angles.numpy(),
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'vector': data.vector.numpy(),
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'y': data.y.numpy(),
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'young': data.young.numpy(),
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'shear': data.shear.numpy(),
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'poisson': data.poisson.numpy(),
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}
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