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I was getting a similar error `pyarrow.lib.ArrowInvalid: Integer value 528 not in range: -128 to 127` - AFAICT, this is because the type specified for `reddit_scores` is `datasets.Sequence(datasets.Value("int8"))`, but the actual values can be well outside the max range for 8-bit integers.
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I was getting a similar error `pyarrow.lib.ArrowInvalid: Integer value 528 not in range: -128 to 127` - AFAICT, this is because the type specified for `reddit_scores` is `datasets.Sequence(datasets.Value("int8"))`, but the actual values can be well outside the max range for 8-bit integers. I worked around this by downloading the `the_pile_openwebtext2.py` and editing it to use local files and drop reddit scores as a column (not needed for my purposes). _Originally posted by @tc-wolf in https://github.com/huggingface/datasets/issues/3053#issuecomment-1281392422_
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[ "Hi! Indeed it would be useful to support this. PyArrow natively supports schema-level and column-level metadata, so implementing this should be straightforward. The API I have in mind would work as follows:\r\n```python\r\ncol_feature = Value(\"string\", metadata=\"Some column-level metadata\")\r\n\r\nfeatures = Features({\"col\": col_feature}, metadata=\"Some schema-level metadata\")\r\n```\r\n\r\nWDYT?", "Sorry for the late reply, \r\nYes, I think this is the most straight-forward approach with the things that we already have.\r\n\r\n", "@mariosasko Let me know how I can help." ]
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### Feature request Being able to put some metadata for each column as a string or any other type. ### Motivation I will bring the motivation by an example, lets say we are experimenting with embedding produced by some image encoder network, and we want to iterate through a couple of preprocessing and see which one works better in our downstream task, here as workaround right now what I do is the compute the hash of the preprocessing that the images went through as part of the new columns name, it would be nice to attach some kinda meta data in these scenarios to the each columns. metadata ### Your contribution Maybe we could map another relational like database as the metadata?
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c4 dataset streaming fails with `FileNotFoundError`
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[ "Also encountering this issue for every dataset I try to stream! Installed datasets from main:\r\n```\r\n- `datasets` version: 2.10.1.dev0\r\n- Platform: macOS-13.1-arm64-arm-64bit\r\n- Python version: 3.9.13\r\n- PyArrow version: 10.0.1\r\n- Pandas version: 1.5.2\r\n```\r\n\r\nRepro:\r\n```python\r\nfrom datasets import load_dataset\r\n\r\nspigi = load_dataset(\"kensho/spgispeech\", \"dev\", split=\"validation\", streaming=True, use_auth_token=True)\r\nsample = next(iter(spigi))\r\n```\r\n\r\n<details>\r\n<summary> Traceback </summary>\r\n\r\n```python\r\n---------------------------------------------------------------------------\r\nClientResponseError Traceback (most recent call last)\r\nFile ~/venv/lib/python3.9/site-packages/fsspec/implementations/http.py:407, in HTTPFileSystem._info(self, url, **kwargs)\r\n 405 try:\r\n 406 info.update(\r\n--> 407 await _file_info(\r\n 408 self.encode_url(url),\r\n 409 size_policy=policy,\r\n 410 session=session,\r\n 411 **self.kwargs,\r\n 412 **kwargs,\r\n 413 )\r\n 414 )\r\n 415 if info.get(\"size\") is not None:\r\n\r\nFile ~/venv/lib/python3.9/site-packages/fsspec/implementations/http.py:792, in _file_info(url, session, size_policy, **kwargs)\r\n 791 async with r:\r\n--> 792 r.raise_for_status()\r\n 794 # TODO:\r\n 795 # recognise lack of 'Accept-Ranges',\r\n 796 # or 'Accept-Ranges': 'none' (not 'bytes')\r\n 797 # to mean streaming only, no random access => return None\r\n\r\nFile ~/venv/lib/python3.9/site-packages/aiohttp/client_reqrep.py:1005, in ClientResponse.raise_for_status(self)\r\n 1004 self.release()\r\n-> 1005 raise ClientResponseError(\r\n 1006 self.request_info,\r\n 1007 self.history,\r\n 1008 status=self.status,\r\n 1009 message=self.reason,\r\n 1010 headers=self.headers,\r\n 1011 )\r\n\r\nClientResponseError: 403, message='Forbidden', url=URL('[https://cdn-lfs.huggingface.co/repos/e2/89/e28905247d6f48bb4edad5baf9b1bb4158e897a13fdf18bf3b8ee89ff8387ab8/46eca7431a7b6bad344bf451800e5b10cea1dd168f26d1027a6d9eb374b7fac3?response-content-disposition=attachment%3B+filename*%3DUTF-8''dev.csv%3B+filename%3D%22dev.csv%22%3B&response-content-type=text/csv&Expires=1677494732&Policy=eyJTdGF0ZW1lbnQiOlt7IlJlc291cmNlIjoiaHR0cHM6Ly9jZG4tbGZzLmh1Z2dpbmdmYWNlLmNvL3JlcG9zL2UyLzg5L2UyODkwNTI0N2Q2ZjQ4YmI0ZWRhZDViYWY5YjFiYjQxNThlODk3YTEzZmRmMThiZjNiOGVlODlmZjgzODdhYjgvNDZlY2E3NDMxYTdiNmJhZDM0NGJmNDUxODAwZTViMTBjZWExZGQxNjhmMjZkMTAyN2E2ZDllYjM3NGI3ZmFjMz9yZXNwb25zZS1jb250ZW50LWRpc3Bvc2l0aW9uPSomcmVzcG9uc2UtY29udGVudC10eXBlPXRleHQlMkZjc3YiLCJDb25kaXRpb24iOnsiRGF0ZUxlc3NUaGFuIjp7IkFXUzpFcG9jaFRpbWUiOjE2Nzc0OTQ3MzJ9fX1dfQ__&Signature=EzQB9f7xPckvqfFB6LzcyR-wzTnQCqtPDdWtQUzZ3QJ-gY-IHG5mxQITJgMr1nVTbJZrPmGAaDngMcPFUfSQa8RmCqYH~dZl-UGE8CO4neKNUT1DvA2WEvLDS4WaAJ3SN-9rX0uFb03~c1QS78cIgIRboYvf6ugKiJz86Bd7Vs~tcp201JFR0A6jIMseqApOnkb9d8dHMP3Ny~F6gO3Qf2QpEWM-QsDIyw2Kz2QV55nq8TsDpRYZCZo50~WwD~73Hej0PoDhEA1K37d19pa0CQhkaN-gjCrbT9xLabbvhJWa~ZkWcMdD0teCgjYqv1wKyvFXDAxukxLGEc7OBXVbYw__&Key-Pair-Id=KVTP0A1DKRTAX](https://cdn-lfs.huggingface.co/repos/e2/89/e28905247d6f48bb4edad5baf9b1bb4158e897a13fdf18bf3b8ee89ff8387ab8/46eca7431a7b6bad344bf451800e5b10cea1dd168f26d1027a6d9eb374b7fac3?response-content-disposition=attachment%3B+filename*%3DUTF-8%27%27dev.csv%3B+filename%3D%22dev.csv%22%3B&response-content-type=text/csv&Expires=1677494732&Policy=eyJTdGF0ZW1lbnQiOlt7IlJlc291cmNlIjoiaHR0cHM6Ly9jZG4tbGZzLmh1Z2dpbmdmYWNlLmNvL3JlcG9zL2UyLzg5L2UyODkwNTI0N2Q2ZjQ4YmI0ZWRhZDViYWY5YjFiYjQxNThlODk3YTEzZmRmMThiZjNiOGVlODlmZjgzODdhYjgvNDZlY2E3NDMxYTdiNmJhZDM0NGJmNDUxODAwZTViMTBjZWExZGQxNjhmMjZkMTAyN2E2ZDllYjM3NGI3ZmFjMz9yZXNwb25zZS1jb250ZW50LWRpc3Bvc2l0aW9uPSomcmVzcG9uc2UtY29udGVudC10eXBlPXRleHQlMkZjc3YiLCJDb25kaXRpb24iOnsiRGF0ZUxlc3NUaGFuIjp7IkFXUzpFcG9jaFRpbWUiOjE2Nzc0OTQ3MzJ9fX1dfQ__&Signature=EzQB9f7xPckvqfFB6LzcyR-wzTnQCqtPDdWtQUzZ3QJ-gY-IHG5mxQITJgMr1nVTbJZrPmGAaDngMcPFUfSQa8RmCqYH~dZl-UGE8CO4neKNUT1DvA2WEvLDS4WaAJ3SN-9rX0uFb03~c1QS78cIgIRboYvf6ugKiJz86Bd7Vs~tcp201JFR0A6jIMseqApOnkb9d8dHMP3Ny~F6gO3Qf2QpEWM-QsDIyw2Kz2QV55nq8TsDpRYZCZo50~WwD~73Hej0PoDhEA1K37d19pa0CQhkaN-gjCrbT9xLabbvhJWa~ZkWcMdD0teCgjYqv1wKyvFXDAxukxLGEc7OBXVbYw__&Key-Pair-Id=KVTP0A1DKRTAX)')\r\n\r\nThe above exception was the direct cause of the following exception:\r\n\r\nFileNotFoundError Traceback (most recent call last)\r\nCell In[5], line 4\r\n 1 from datasets import load_dataset\r\n 3 spigi = load_dataset(\"kensho/spgispeech\", \"dev\", split=\"validation\", streaming=True)\r\n----> 4 sample = next(iter(spigi))\r\n\r\nFile ~/datasets/src/datasets/iterable_dataset.py:937, in IterableDataset.__iter__(self)\r\n 934 yield from self._iter_pytorch(ex_iterable)\r\n 935 return\r\n--> 937 for key, example in ex_iterable:\r\n 938 if self.features:\r\n 939 # `IterableDataset` automatically fills missing columns with None.\r\n 940 # This is done with `_apply_feature_types_on_example`.\r\n 941 yield _apply_feature_types_on_example(\r\n 942 example, self.features, token_per_repo_id=self._token_per_repo_id\r\n 943 )\r\n\r\nFile ~/datasets/src/datasets/iterable_dataset.py:113, in ExamplesIterable.__iter__(self)\r\n 112 def __iter__(self):\r\n--> 113 yield from self.generate_examples_fn(**self.kwargs)\r\n\r\nFile ~/.cache/huggingface/modules/datasets_modules/datasets/kensho--spgispeech/5fbf75dd9ef795a9b5a673457d2cbaf0b8fa0de8fb62acbd1da338d83a41e2f0/spgispeech.py:186, in Spgispeech._generate_examples(self, local_extracted_archive_paths, archives, meta_path)\r\n 183 dict_keys = [\"wav_filename\", \"wav_filesize\", \"transcript\"]\r\n 185 logging.info(\"Reading metadata...\")\r\n--> 186 with open(meta_path, encoding=\"utf-8\") as f:\r\n 187 csvreader = csv.DictReader(f, delimiter=\"|\")\r\n 188 metadata = {x[\"wav_filename\"]: dict((k, x[k]) for k in dict_keys) for x in csvreader}\r\n\r\nFile ~/datasets/src/datasets/streaming.py:70, in extend_module_for_streaming.<locals>.wrap_auth.<locals>.wrapper(*args, **kwargs)\r\n 68 @wraps(function)\r\n 69 def wrapper(*args, **kwargs):\r\n---> 70 return function(*args, use_auth_token=use_auth_token, **kwargs)\r\n\r\nFile ~/datasets/src/datasets/download/streaming_download_manager.py:495, in xopen(file, mode, use_auth_token, *args, **kwargs)\r\n 493 kwargs = {**kwargs, **new_kwargs}\r\n 494 try:\r\n--> 495 file_obj = fsspec.open(file, mode=mode, *args, **kwargs).open()\r\n 496 except ValueError as e:\r\n 497 if str(e) == \"Cannot seek streaming HTTP file\":\r\n\r\nFile ~/venv/lib/python3.9/site-packages/fsspec/core.py:135, in OpenFile.open(self)\r\n 128 def open(self):\r\n 129 \"\"\"Materialise this as a real open file without context\r\n 130 \r\n 131 The OpenFile object should be explicitly closed to avoid enclosed file\r\n 132 instances persisting. You must, therefore, keep a reference to the OpenFile\r\n 133 during the life of the file-like it generates.\r\n 134 \"\"\"\r\n--> 135 return self.__enter__()\r\n\r\nFile ~/venv/lib/python3.9/site-packages/fsspec/core.py:103, in OpenFile.__enter__(self)\r\n 100 def __enter__(self):\r\n 101 mode = self.mode.replace(\"t\", \"\").replace(\"b\", \"\") + \"b\"\r\n--> 103 f = self.fs.open(self.path, mode=mode)\r\n 105 self.fobjects = [f]\r\n 107 if self.compression is not None:\r\n\r\nFile ~/venv/lib/python3.9/site-packages/fsspec/spec.py:1106, in AbstractFileSystem.open(self, path, mode, block_size, cache_options, compression, **kwargs)\r\n 1104 else:\r\n 1105 ac = kwargs.pop(\"autocommit\", not self._intrans)\r\n-> 1106 f = self._open(\r\n 1107 path,\r\n 1108 mode=mode,\r\n 1109 block_size=block_size,\r\n 1110 autocommit=ac,\r\n 1111 cache_options=cache_options,\r\n 1112 **kwargs,\r\n 1113 )\r\n 1114 if compression is not None:\r\n 1115 from fsspec.compression import compr\r\n\r\nFile ~/venv/lib/python3.9/site-packages/fsspec/implementations/http.py:346, in HTTPFileSystem._open(self, path, mode, block_size, autocommit, cache_type, cache_options, size, **kwargs)\r\n 344 kw[\"asynchronous\"] = self.asynchronous\r\n 345 kw.update(kwargs)\r\n--> 346 size = size or self.info(path, **kwargs)[\"size\"]\r\n 347 session = sync(self.loop, self.set_session)\r\n 348 if block_size and size:\r\n\r\nFile ~/venv/lib/python3.9/site-packages/fsspec/asyn.py:113, in sync_wrapper.<locals>.wrapper(*args, **kwargs)\r\n 110 @functools.wraps(func)\r\n 111 def wrapper(*args, **kwargs):\r\n 112 self = obj or args[0]\r\n--> 113 return sync(self.loop, func, *args, **kwargs)\r\n\r\nFile ~/venv/lib/python3.9/site-packages/fsspec/asyn.py:98, in sync(loop, func, timeout, *args, **kwargs)\r\n 96 raise FSTimeoutError from return_result\r\n 97 elif isinstance(return_result, BaseException):\r\n---> 98 raise return_result\r\n 99 else:\r\n 100 return return_result\r\n\r\nFile ~/venv/lib/python3.9/site-packages/fsspec/asyn.py:53, in _runner(event, coro, result, timeout)\r\n 51 coro = asyncio.wait_for(coro, timeout=timeout)\r\n 52 try:\r\n---> 53 result[0] = await coro\r\n 54 except Exception as ex:\r\n 55 result[0] = ex\r\n\r\nFile ~/venv/lib/python3.9/site-packages/fsspec/implementations/http.py:420, in HTTPFileSystem._info(self, url, **kwargs)\r\n 417 except Exception as exc:\r\n 418 if policy == \"get\":\r\n 419 # If get failed, then raise a FileNotFoundError\r\n--> 420 raise FileNotFoundError(url) from exc\r\n 421 logger.debug(str(exc))\r\n 423 return {\"name\": url, \"size\": None, **info, \"type\": \"file\"}\r\n\r\nFileNotFoundError: https://huggingface.co/datasets/kensho/spgispeech/resolve/main/data/meta/dev.csv\r\n```\r\n</details>", "Hi ! We're investigating this issue, sorry for the inconvenience", "This has been resolved ! Thanks for reporting", "Wow, thanks for the very quick fix!", "This problem now appears again, this time with an underlying HTTP 502 status code:\r\n\r\n```\r\naiohttp.client_exceptions.ClientResponseError: 502, message='Bad Gateway', url=URL('https://huggingface.co/datasets/allenai/c4/resolve/1ddc917116b730e1859edef32896ec5c16be51d0/en/c4-validation.00002-of-00008.json.gz')\r\n```", "Re-executing a minute later, the underlying cause is an HTTP 403 status code, as reported yesterday:\r\n\r\n```\r\naiohttp.client_exceptions.ClientResponseError: 403, message='Forbidden', url=URL('https://cdn-lfs.huggingface.co/datasets/allenai/c4/4bf6b248b0f910dcde2cdf2118d6369d8208c8f9515ec29ab73e531f380b18e2?response-content-disposition=attachment%3B+filename*%3DUTF-8''c4-validation.00002-of-00008.json.gz%3B+filename%3D%22c4-validation.00002-of-00008.json.gz%22%3B&response-content-type=application/gzip&Expires=1677571273&Policy=eyJTdGF0ZW1lbnQiOlt7IlJlc291cmNlIjoiaHR0cHM6Ly9jZG4tbGZzLmh1Z2dpbmdmYWNlLmNvL2RhdGFzZXRzL2FsbGVuYWkvYzQvNGJmNmIyNDhiMGY5MTBkY2RlMmNkZjIxMThkNjM2OWQ4MjA4YzhmOTUxNWVjMjlhYjczZTUzMWYzODBiMThlMj9yZXNwb25zZS1jb250ZW50LWRpc3Bvc2l0aW9uPSomcmVzcG9uc2UtY29udGVudC10eXBlPWFwcGxpY2F0aW9uJTJGZ3ppcCIsIkNvbmRpdGlvbiI6eyJEYXRlTGVzc1RoYW4iOnsiQVdTOkVwb2NoVGltZSI6MTY3NzU3MTI3M319fV19&Signature=WW42NOKkLuX~xVB1QfbkqzdvGo2AOXpgbF3PjTXy6iKd~ffilr1N9ScPXfvTXqy5yvdhJg1G0xJy1zYtUjGAL8GEx3Av-0vIhpWMGYTM8XKEU5gYA9qt30oVtNph6TkTYSABrsYTaj-hzQL9WCgyapmjvG69ETMh4wj44r2rcbk4T3j0l6l4u76Gh~lyRSll3aK4qycdUwcyL7FECDu~0W1mJIJwKkCrWHhSpHJSshb-0ElwG71pq4eyQ5g2uxHdK6JbRF7loxUpRQQJ1vlk0EHXdw0wTMaQ9tqHy6xcrQd8Ep0Yvx3tUD8MR0vWOcbQKnL6LwPQByc8tkChlpjnig__&Key-Pair-Id=KVTP0A1DKRTAX')\r\n```", "I'm facing the same problem. Interestingly using `wget` I can download the file. ", "It's been resolved again ;)", "> It's been resolved again ;)\r\n\r\nI'm experiencing the same issue when trying to load this dataset, `FileNotFoundError: https://huggingface.co/datasets/allenai/c4/resolve/1ddc917116b730e1859edef32896ec5c16be51d0/realnewslike/c4-train.00000-of-00512.json.gz`" ]
1,677,225,452,000
1,678,108,451,000
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NONE
null
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### Describe the bug Loading the `c4` dataset in streaming mode with `load_dataset("c4", "en", split="validation", streaming=True)` and then using it fails with a `FileNotFoundException`. ### Steps to reproduce the bug ```python from datasets import load_dataset dataset = load_dataset("c4", "en", split="train", streaming=True) next(iter(dataset)) ``` causes a ``` FileNotFoundError: https://huggingface.co/datasets/allenai/c4/resolve/1ddc917116b730e1859edef32896ec5c16be51d0/en/c4-train.00000-of-01024.json.gz ``` I can download this file manually though e.g. by entering this URL in a browser. There is an underlying HTTP 403 status code: ``` aiohttp.client_exceptions.ClientResponseError: 403, message='Forbidden', url=URL('https://cdn-lfs.huggingface.co/datasets/allenai/c4/8ef8d75b0e045dec4aa5123a671b4564466b0707086a7ed1ba8721626dfffbc9?response-content-disposition=attachment%3B+filename*%3DUTF-8''c4-train.00000-of-01024.json.gz%3B+filename%3D%22c4-train.00000-of-01024.json.gz%22%3B&response-content-type=application/gzip&Expires=1677483770&Policy=eyJTdGF0ZW1lbnQiOlt7IlJlc291cmNlIjoiaHR0cHM6Ly9jZG4tbGZzLmh1Z2dpbmdmYWNlLmNvL2RhdGFzZXRzL2FsbGVuYWkvYzQvOGVmOGQ3NWIwZTA0NWRlYzRhYTUxMjNhNjcxYjQ1NjQ0NjZiMDcwNzA4NmE3ZWQxYmE4NzIxNjI2ZGZmZmJjOT9yZXNwb25zZS1jb250ZW50LWRpc3Bvc2l0aW9uPSomcmVzcG9uc2UtY29udGVudC10eXBlPWFwcGxpY2F0aW9uJTJGZ3ppcCIsIkNvbmRpdGlvbiI6eyJEYXRlTGVzc1RoYW4iOnsiQVdTOkVwb2NoVGltZSI6MTY3NzQ4Mzc3MH19fV19&Signature=yjL3UeY72cf2xpnvPvD68eAYOEe2qtaUJV55sB-jnPskBJEMwpMJcBZvg2~GqXZdM3O-GWV-Z3CI~d4u5VCb4YZ-HlmOjr3VBYkvox2EKiXnBIhjMecf2UVUPtxhTa9kBVlWjqu4qKzB9gKXZF2Cwpp5ctLzapEaT2nnqF84RAL-rsqMA3I~M8vWWfivQsbBK63hMfgZqqKMgdWM0iKMaItveDl0ufQ29azMFmsR7qd8V7sU2Z-F1fAeohS8HpN9OOnClW34yi~YJ2AbgZJJBXA~qsylfVA0Qp7Q~yX~q4P8JF1vmJ2BjkiSbGrj3bAXOGugpOVU5msI52DT88yMdA__&Key-Pair-Id=KVTP0A1DKRTAX') ``` ### Expected behavior This should retrieve the first example from the C4 validation set. This worked a few days ago but stopped working now. ### Environment info - `datasets` version: 2.9.0 - Platform: Linux-5.15.0-60-generic-x86_64-with-glibc2.31 - Python version: 3.9.16 - PyArrow version: 11.0.0 - Pandas version: 1.5.3
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1,597,257,624
I_kwDODunzps5fNDeY
5,572
Datasets 2.10.0 does not reuse the dataset cache
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1,677,173,291,000
1,677,175,435,000
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### Describe the bug download_mode="reuse_dataset_if_exists" will always consider that a dataset doesn't exist. Specifically, upon losing an internet connection trying to load a dataset for a second time in ten seconds, a connection error results, showing a breakpoint of: ``` File ~/jupyterlab/.direnv/python-3.9.6/lib/python3.9/site-packages/datasets/load.py:1174, in dataset_module_factory(path, revision, download_config, download_mode, dynamic_modules_path, data_dir, data_files, **download_kwargs) 1165 except Exception as e: # noqa: catch any exception of hf_hub and consider that the dataset doesn't exist 1166 if isinstance( 1167 e, 1168 ( (...) 1172 ), 1173 ): -> 1174 raise ConnectionError(f"Couldn't reach '{path}' on the Hub ({type(e).__name__})") 1175 elif "404" in str(e): 1176 msg = f"Dataset '{path}' doesn't exist on the Hub" ConnectionError: Couldn't reach 'lsb/tenk' on the Hub (ConnectionError) ``` This has been around since at least v2.0. ### Steps to reproduce the bug ``` from datasets import load_dataset import numpy as np tenk = load_dataset("lsb/tenk") # ten thousand integers print(np.average(tenk['train']['a'])) # prints 4999.5 ### now disconnect your internet tenk_too = load_dataset("lsb/tenk", download_mode="reuse_dataset_if_exists") # Raises ConnectionError: Couldn't reach 'lsb/tenk' on the Hub (ConnectionError) ``` ### Expected behavior I expected that I would be able to reuse the dataset I just downloaded. ### Environment info - `datasets` version: 2.10.0 - Platform: macOS-13.1-arm64-arm-64bit - Python version: 3.9.6 - PyArrow version: 7.0.0 - Pandas version: 1.5.2
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1,597,198,953
I_kwDODunzps5fM1Jp
5,571
load_dataset fails for JSON in windows
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[ "Hi! \r\n\r\nYou need to pass an input json file explicitly as `data_files` to `load_dataset` to avoid this error:\r\n```python\r\n ds = load_dataset(\"json\", data_files=args.input_json)\r\n```\r\n\r\n", "Thanks it worked!" ]
1,677,171,011,000
1,677,244,907,000
1,677,244,907,000
NONE
null
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### Describe the bug Steps: 1. Created a dataset in a Linux VM and created a small sample using dataset.to_json() method. 2. Downloaded the JSON file to my local Windows machine for working and saved in say - r"C:\Users\name\file.json" 3. I am reading the file in my local PyCharm - the location of python file is different than the location of the JSON. 4. When I read using load_dataset("json",args.input_json), it throws and error from builder.py. raise InvalidConfigName( f"Bad characters from black list '{invalid_windows_characters}' found in '{self.name}'. " f"They could create issues when creating a directory for this config on Windows filesystem." 6. When I bring the data to the current directory, it works fine. ### Steps to reproduce the bug Steps: 1. Created a dataset in a Linux VM and created a small sample using dataset.to_json() method. 2. Downloaded the JSON file to my local Windows machine for working and saved in say - r"C:\Users\name\file.json" 3. I am reading the file in my local PyCharm - the location of python file is different than the location of the JSON. 4. When I read using load_dataset("json",args.input_json), it throws and error from builder.py. raise InvalidConfigName( f"Bad characters from black list '{invalid_windows_characters}' found in '{self.name}'. " f"They could create issues when creating a directory for this config on Windows filesystem." 6. When I bring the data to the current directory, it works fine. ### Expected behavior Should be able to read from a path different than current directory in Windows machine. ### Environment info datasets version: 2.3.1 python version: 3.8 Windows OS
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1,597,190,926
I_kwDODunzps5fMzMO
5,570
load_dataset gives FileNotFoundError on imagenet-1k if license is not accepted on the hub
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[ "Hi, thanks for the feedback! Would it help to add a tip or note saying the dataset is gated and you need to accept the license before downloading it?" ]
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### Describe the bug When calling ```load_dataset('imagenet-1k')``` FileNotFoundError is raised, if not logged in and if logged in with huggingface-cli but not having accepted the licence on the hub. There is no error once accepting. ### Steps to reproduce the bug ``` from datasets import load_dataset imagenet = load_dataset("imagenet-1k", split="train", streaming=True) FileNotFoundError: Couldn't find a dataset script at /content/imagenet-1k/imagenet-1k.py or any data file in the same directory. Couldn't find 'imagenet-1k' on the Hugging Face Hub either: FileNotFoundError: Dataset 'imagenet-1k' doesn't exist on the Hub ``` tested on a colab notebook. ### Expected behavior I would expect a specific error indicating that I have to login then accept the dataset licence. I find this bug very relevant as this code is on a guide on the [Huggingface documentation for Datasets](https://huggingface.co/docs/datasets/about_mapstyle_vs_iterable) ### Environment info google colab cpu-only instance
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dataset.to_iterable_dataset() loses useful info like dataset features
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[ "Hi ! Oh good catch. I think the features should be passed to `IterableDataset.from_generator()` in `to_iterable_dataset()` indeed.\r\n\r\nSetting this as a good first issue if someone would like to contribute, otherwise we can take care of it :)", "#self-assign", "seems like the feature parameter is missing from `return IterableDataset.from_generator(Dataset._iter_shards, gen_kwargs={\"shards\": shards})` hence it defaults to None." ]
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CONTRIBUTOR
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### Describe the bug Hello, I like the new `to_iterable_dataset` feature but I noticed something that seems to be missing. When using `to_iterable_dataset` to transform your map style dataset into iterable dataset, you lose valuable metadata like the features. These metadata are useful if you want to interleave iterable datasets, cast columns etc. ### Steps to reproduce the bug ```python dataset = load_dataset("lhoestq/demo1")["train"] print(dataset.features) # {'id': Value(dtype='string', id=None), 'package_name': Value(dtype='string', id=None), 'review': Value(dtype='string', id=None), 'date': Value(dtype='string', id=None), 'star': Value(dtype='int64', id=None), 'version_id': Value(dtype='int64', id=None)} dataset = dataset.to_iterable_dataset() print(dataset.features) # None ``` ### Expected behavior Keep the relevant information ### Environment info datasets==2.10.0
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Directly reading parquet files in a s3 bucket from the load_dataset method
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[ "Hi ! I think is in the scope of this other issue: to https://github.com/huggingface/datasets/issues/5281 " ]
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### Feature request Right now, we have to read the get the parquet file to the local storage. So having ability to read given the bucket directly address would be benificial ### Motivation In a production set up, this feature can help us a lot. So we do not need move training datafiles in between storage. ### Your contribution I am willing to help if there's anyway.
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`.shuffle` throwing error `ValueError: Protocol not known: parent`
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[ "Hi ! The indices mapping is written in the same cachedirectory as your dataset.\r\n\r\nCan you run this to show your current cache directory ?\r\n```python\r\nprint(train_dataset.cache_files)\r\n```", "```\r\n[{'filename': '.../train/dataset.arrow'}, {'filename': '.../train/dataset.arrow'}]\r\n```\r\n\r\nThese are the actual paths where `.hf` files are stored. ", "I'm not aware of any `.hf` file ? What are you referring to ?\r\n\r\nAlso the error says \"Protocol unknown: parent\". Is there a chance you may have ended up with a path that contains this string `parent://` ?", "I figured out why the issue was occuring but don't know the long-term fix.\r\nThe dataset I was trying to shuffle was loaded from a saved file which had `::` delimiter in filename. When I try with the exact same file without `::` in filename, it works as expected.\r\nQuick fix is to not use colons in filename. But if this is expected behaviour, this should be clearly stated in the documentation.\r\nThanks for help @lhoestq " ]
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### Describe the bug ``` --------------------------------------------------------------------------- ValueError Traceback (most recent call last) Cell In [16], line 1 ----> 1 train_dataset = train_dataset.shuffle() File /opt/conda/envs/pytorch/lib/python3.9/site-packages/datasets/arrow_dataset.py:551, in transmit_format.<locals>.wrapper(*args, **kwargs) 544 self_format = { 545 "type": self._format_type, 546 "format_kwargs": self._format_kwargs, 547 "columns": self._format_columns, 548 "output_all_columns": self._output_all_columns, 549 } 550 # apply actual function --> 551 out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs) 552 datasets: List["Dataset"] = list(out.values()) if isinstance(out, dict) else [out] 553 # re-apply format to the output File /opt/conda/envs/pytorch/lib/python3.9/site-packages/datasets/fingerprint.py:480, in fingerprint_transform.<locals>._fingerprint.<locals>.wrapper(*args, **kwargs) 476 validate_fingerprint(kwargs[fingerprint_name]) 478 # Call actual function --> 480 out = func(self, *args, **kwargs) 482 # Update fingerprint of in-place transforms + update in-place history of transforms 484 if inplace: # update after calling func so that the fingerprint doesn't change if the function fails File /opt/conda/envs/pytorch/lib/python3.9/site-packages/datasets/arrow_dataset.py:3616, in Dataset.shuffle(self, seed, generator, keep_in_memory, load_from_cache_file, indices_cache_file_name, writer_batch_size, new_fingerprint) 3610 return self._new_dataset_with_indices( 3611 fingerprint=new_fingerprint, indices_cache_file_name=indices_cache_file_name 3612 ) 3614 permutation = generator.permutation(len(self)) -> 3616 return self.select( 3617 indices=permutation, 3618 keep_in_memory=keep_in_memory, 3619 indices_cache_file_name=indices_cache_file_name if not keep_in_memory else None, 3620 writer_batch_size=writer_batch_size, 3621 new_fingerprint=new_fingerprint, 3622 ) File /opt/conda/envs/pytorch/lib/python3.9/site-packages/datasets/arrow_dataset.py:551, in transmit_format.<locals>.wrapper(*args, **kwargs) 544 self_format = { 545 "type": self._format_type, 546 "format_kwargs": self._format_kwargs, 547 "columns": self._format_columns, 548 "output_all_columns": self._output_all_columns, 549 } 550 # apply actual function --> 551 out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs) 552 datasets: List["Dataset"] = list(out.values()) if isinstance(out, dict) else [out] 553 # re-apply format to the output File /opt/conda/envs/pytorch/lib/python3.9/site-packages/datasets/fingerprint.py:480, in fingerprint_transform.<locals>._fingerprint.<locals>.wrapper(*args, **kwargs) 476 validate_fingerprint(kwargs[fingerprint_name]) 478 # Call actual function --> 480 out = func(self, *args, **kwargs) 482 # Update fingerprint of in-place transforms + update in-place history of transforms 484 if inplace: # update after calling func so that the fingerprint doesn't change if the function fails File /opt/conda/envs/pytorch/lib/python3.9/site-packages/datasets/arrow_dataset.py:3266, in Dataset.select(self, indices, keep_in_memory, indices_cache_file_name, writer_batch_size, new_fingerprint) 3263 return self._select_contiguous(start, length, new_fingerprint=new_fingerprint) 3265 # If not contiguous, we need to create a new indices mapping -> 3266 return self._select_with_indices_mapping( 3267 indices, 3268 keep_in_memory=keep_in_memory, 3269 indices_cache_file_name=indices_cache_file_name, 3270 writer_batch_size=writer_batch_size, 3271 new_fingerprint=new_fingerprint, 3272 ) File /opt/conda/envs/pytorch/lib/python3.9/site-packages/datasets/arrow_dataset.py:551, in transmit_format.<locals>.wrapper(*args, **kwargs) 544 self_format = { 545 "type": self._format_type, 546 "format_kwargs": self._format_kwargs, 547 "columns": self._format_columns, 548 "output_all_columns": self._output_all_columns, 549 } 550 # apply actual function --> 551 out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs) 552 datasets: List["Dataset"] = list(out.values()) if isinstance(out, dict) else [out] 553 # re-apply format to the output File /opt/conda/envs/pytorch/lib/python3.9/site-packages/datasets/fingerprint.py:480, in fingerprint_transform.<locals>._fingerprint.<locals>.wrapper(*args, **kwargs) 476 validate_fingerprint(kwargs[fingerprint_name]) 478 # Call actual function --> 480 out = func(self, *args, **kwargs) 482 # Update fingerprint of in-place transforms + update in-place history of transforms 484 if inplace: # update after calling func so that the fingerprint doesn't change if the function fails File /opt/conda/envs/pytorch/lib/python3.9/site-packages/datasets/arrow_dataset.py:3389, in Dataset._select_with_indices_mapping(self, indices, keep_in_memory, indices_cache_file_name, writer_batch_size, new_fingerprint) 3387 logger.info(f"Caching indices mapping at {indices_cache_file_name}") 3388 tmp_file = tempfile.NamedTemporaryFile("wb", dir=os.path.dirname(indices_cache_file_name), delete=False) -> 3389 writer = ArrowWriter( 3390 path=tmp_file.name, writer_batch_size=writer_batch_size, fingerprint=new_fingerprint, unit="indices" 3391 ) 3393 indices = indices if isinstance(indices, list) else list(indices) 3395 size = len(self) File /opt/conda/envs/pytorch/lib/python3.9/site-packages/datasets/arrow_writer.py:315, in ArrowWriter.__init__(self, schema, features, path, stream, fingerprint, writer_batch_size, hash_salt, check_duplicates, disable_nullable, update_features, with_metadata, unit, embed_local_files, storage_options) 312 self._disable_nullable = disable_nullable 314 if stream is None: --> 315 fs_token_paths = fsspec.get_fs_token_paths(path, storage_options=storage_options) 316 self._fs: fsspec.AbstractFileSystem = fs_token_paths[0] 317 self._path = ( 318 fs_token_paths[2][0] 319 if not is_remote_filesystem(self._fs) 320 else self._fs.unstrip_protocol(fs_token_paths[2][0]) 321 ) File /opt/conda/envs/pytorch/lib/python3.9/site-packages/fsspec/core.py:593, in get_fs_token_paths(urlpath, mode, num, name_function, storage_options, protocol, expand) 591 else: 592 urlpath = stringify_path(urlpath) --> 593 chain = _un_chain(urlpath, storage_options or {}) 594 if len(chain) > 1: 595 inkwargs = {} File /opt/conda/envs/pytorch/lib/python3.9/site-packages/fsspec/core.py:330, in _un_chain(path, kwargs) 328 for bit in reversed(bits): 329 protocol = split_protocol(bit)[0] or "file" --> 330 cls = get_filesystem_class(protocol) 331 extra_kwargs = cls._get_kwargs_from_urls(bit) 332 kws = kwargs.get(protocol, {}) File /opt/conda/envs/pytorch/lib/python3.9/site-packages/fsspec/registry.py:240, in get_filesystem_class(protocol) 238 if protocol not in registry: 239 if protocol not in known_implementations: --> 240 raise ValueError("Protocol not known: %s" % protocol) 241 bit = known_implementations[protocol] 242 try: ValueError: Protocol not known: parent ``` This is what the `train_dataset` object looks like ``` Dataset({ features: ['label', 'input_ids', 'attention_mask'], num_rows: 364166 }) ``` ### Steps to reproduce the bug The `train_dataset` obj is created by concatenating two datasets And then shuffle is called, but it throws the mentioned error. ### Expected behavior Should shuffle the dataset properly. ### Environment info - `datasets` version: 2.6.1 - Platform: Linux-5.15.0-1022-aws-x86_64-with-glibc2.31 - Python version: 3.9.13 - PyArrow version: 10.0.0 - Pandas version: 1.4.4
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Apply flake8-comprehensions to codebase
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### Feature request Apply ruff flake8 comprehension checks to codebase. ### Motivation This should strictly improve the performance / readability of the codebase by removing unnecessary iteration, function calls, etc. This should generate better Python bytecode which should strictly improve performance. I already applied this fixes to PyTorch and Sympy with little issue and have opened PRs to diffusers and transformers todo this as well. ### Your contribution Making a PR.
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Downloaded datasets do not cache at $HF_HOME
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[ "Hi ! Can you make sure you set `HF_HOME` before importing `datasets` ?\r\n\r\nThen you can print\r\n```python\r\nprint(datasets.config.HF_CACHE_HOME)\r\nprint(datasets.config.HF_DATASETS_CACHE)\r\n```" ]
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### Describe the bug In the huggingface course (https://huggingface.co/course/chapter3/2?fw=pt) it said that if we set HF_HOME, downloaded datasets would be cached at specified address but it does not. downloaded models from checkpoint names are downloaded and cached at HF_HOME but this is not the case for datasets, they are still cached at ~/.cache/huggingface/datasets. ### Steps to reproduce the bug Run the following code ``` from datasets import load_dataset raw_datasets = load_dataset("glue", "mrpc") raw_datasets ``` it downloads and store dataset at ~/.cache/huggingface/datasets ### Expected behavior to cache dataset at HF_HOME. ### Environment info python 3.10.6 Kubuntu 22.04 HF_HOME located on a separate partition
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5,543
the pile datasets url seems to change back
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[ "Thanks for reporting, @wjfwzzc.\r\n\r\nI am transferring this issue to the corresponding dataset on the Hub: https://huggingface.co/datasets/bookcorpusopen/discussions/1", "Thank you. All fixes are done:\r\n- [x] https://huggingface.co/datasets/bookcorpusopen/discussions/2\r\n- [x] https://huggingface.co/datasets/the_pile/discussions/1\r\n- [x] https://huggingface.co/datasets/the_pile_books3/discussions/1\r\n- [x] https://huggingface.co/datasets/the_pile_openwebtext2/discussions/2\r\n- [x] https://huggingface.co/datasets/the_pile_stack_exchange/discussions/2" ]
1,676,623,211,000
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NONE
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### Describe the bug in #3627, the host url of the pile dataset became `https://mystic.the-eye.eu`. Now the new url is broken, but `https://the-eye.eu` seems to work again. ### Steps to reproduce the bug ```python3 from datasets import load_dataset dataset = load_dataset("bookcorpusopen") ``` shows ```python3 ConnectionError: Couldn't reach https://mystic.the-eye.eu/public/AI/pile_preliminary_components/books1.tar.gz (ProxyError(MaxRetryError("HTTPSConnectionPool(host='mystic.the-eye.eu', port=443): Max retries exceeded with url: /public/AI/pile_pr eliminary_components/books1.tar.gz (Caused by ProxyError('Cannot connect to proxy.', OSError('Tunnel connection failed: 504 Gateway Timeout')))"))) ``` ### Expected behavior Downloading as normal. ### Environment info - `datasets` version: 2.9.0 - Platform: Linux-5.4.143.bsk.7-amd64-x86_64-with-glibc2.31 - Python version: 3.9.2 - PyArrow version: 6.0.1 - Pandas version: 1.5.3
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I_kwDODunzps5esJ_T
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Flattening indices in selected datasets is extremely inefficient
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[ "Running the script above on the branch https://github.com/huggingface/datasets/pull/5542 results in the expected behaviour:\r\n```\r\nNum chunks for original ds: 1\r\nOriginal ds save/load\r\nsave_to_disk -- RAM memory used: 0.671875 MB -- Total time: 0.255265 s\r\nload_from_disk -- RAM memory used: 42.796875 MB -- Total time: 0.014899 s\r\nNum chunks for original ds after reloading: 5000\r\n\r\nNum chunks for selected ds: 1\r\nflatten_indices -- RAM memory used: 42.546875 MB -- Total time: 23.735089 s\r\nNum chunks for selected ds after flattening: 5000\r\n\r\nSelected ds save/load\r\nsave_to_disk -- RAM memory used: 0.0 MB -- Total time: 0.287112 s\r\nload_from_disk -- RAM memory used: 38.84375 MB -- Total time: 0.014772 s\r\nNum chunks for selected ds after reloading: 5000\r\n```", "Wouahouh super cool @marioga thanks a lot!", "We just released `datasets==2.10.0` with this big improvement, thanks again @marioga " ]
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CONTRIBUTOR
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### Describe the bug If we perform a `select` (or `shuffle`, `train_test_split`, etc.) operation on a dataset , we end up with a dataset with an `indices_table`. Currently, flattening such dataset consumes a lot of memory and the resulting flat dataset contains ChunkedArrays with as many chunks as there are rows. This is extremely inefficient and slows down the operations on the flat dataset, e.g., saving/loading the dataset to disk becomes really slow. Perhaps more importantly, loading the dataset back from disk basically loads the whole table into RAM, as it cannot take advantage of memory mapping. ### Steps to reproduce the bug The following script reproduces the issue: ```python import gc import os import psutil import tempfile import time from datasets import Dataset DATASET_SIZE = 5000000 def profile(func): def wrapper(*args, **kwargs): mem_before = psutil.Process(os.getpid()).memory_info().rss / (1024 * 1024) start = time.time() # Run function here out = func(*args, **kwargs) end = time.time() mem_after = psutil.Process(os.getpid()).memory_info().rss / (1024 * 1024) print(f"{func.__name__} -- RAM memory used: {mem_after - mem_before} MB -- Total time: {end - start:.6f} s") return out return wrapper def main(): ds = Dataset.from_list([{'col': i} for i in range(DATASET_SIZE)]) print(f"Num chunks for original ds: {ds.data['col'].num_chunks}") with tempfile.TemporaryDirectory() as tmpdir: path1 = os.path.join(tmpdir, 'ds1') print("Original ds save/load") profile(ds.save_to_disk)(path1) ds_loaded = profile(Dataset.load_from_disk)(path1) print(f"Num chunks for original ds after reloading: {ds_loaded.data['col'].num_chunks}") print("") ds_select = ds.select(reversed(range(len(ds)))) print(f"Num chunks for selected ds: {ds_select.data['col'].num_chunks}") del ds del ds_loaded gc.collect() # This would happen anyway when we call save_to_disk ds_select = profile(ds_select.flatten_indices)() print(f"Num chunks for selected ds after flattening: {ds_select.data['col'].num_chunks}") print("") path2 = os.path.join(tmpdir, 'ds2') print("Selected ds save/load") profile(ds_select.save_to_disk)(path2) del ds_select gc.collect() ds_select_loaded = profile(Dataset.load_from_disk)(path2) print(f"Num chunks for selected ds after reloading: {ds_select_loaded.data['col'].num_chunks}") if __name__ == '__main__': main() ``` Sample result: ``` Num chunks for original ds: 1 Original ds save/load save_to_disk -- RAM memory used: 0.515625 MB -- Total time: 0.253888 s load_from_disk -- RAM memory used: 42.765625 MB -- Total time: 0.015176 s Num chunks for original ds after reloading: 5000 Num chunks for selected ds: 1 flatten_indices -- RAM memory used: 4852.609375 MB -- Total time: 46.116774 s Num chunks for selected ds after flattening: 5000000 Selected ds save/load save_to_disk -- RAM memory used: 1326.65625 MB -- Total time: 42.309825 s load_from_disk -- RAM memory used: 2085.953125 MB -- Total time: 11.659137 s Num chunks for selected ds after reloading: 5000000 ``` ### Expected behavior Saving/loading the dataset should be much faster and consume almost no extra memory thanks to pyarrow memory mapping. ### Environment info - `datasets` version: 2.9.1.dev0 - Platform: macOS-13.1-arm64-arm-64bit - Python version: 3.10.8 - PyArrow version: 11.0.0 - Pandas version: 1.5.3
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IndexError: invalid index of a 0-dim tensor. Use `tensor.item()` in Python or `tensor.item<T>()` in C++ to convert a 0-dim tensor to a number
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[ "Hi! The `set_transform` does not apply a custom formatting transform on a single example but the entire batch, so the fixed version of your transform would look as follows:\r\n```python\r\nfrom datasets import load_dataset\r\nimport torch\r\n\r\ndataset = load_dataset(\"lambdalabs/pokemon-blip-captions\", split='train')\r\ndef t(batch):\r\n return {\"test\": torch.tensor([1] * len(batch[next(iter(batch))]))}\r\n \r\ndataset.set_transform(t)\r\nd_0 = dataset[0]\r\n```\r\n\r\nStill, the formatter's error message should mention that a dict of **sequences** is expected as the returned value (not just a dict) to make debugging easier.", "I can take this", "Fixed in #5553 ", "> Hi! The `set_transform` does not apply a custom formatting transform on a single example but the entire batch, so the fixed version of your transform would look as follows:\r\n> \r\n> ```python\r\n> from datasets import load_dataset\r\n> import torch\r\n> \r\n> dataset = load_dataset(\"lambdalabs/pokemon-blip-captions\", split='train')\r\n> def t(batch):\r\n> return {\"test\": torch.tensor([1] * len(batch[next(iter(batch))]))}\r\n> \r\n> dataset.set_transform(t)\r\n> d_0 = dataset[0]\r\n> ```\r\n> \r\n> Still, the formatter's error message should mention that a dict of **sequences** is expected as the returned value (not just a dict) to make debugging easier.\r\n\r\nok, will change it according to suggestion. Thanks for the reply!" ]
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NONE
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### Describe the bug When dataset contains a 0-dim tensor, formatting.py raises a following error and fails. ```bash Traceback (most recent call last): File "<path>/lib/python3.8/site-packages/datasets/formatting/formatting.py", line 501, in format_row return _unnest(formatted_batch) File "<path>/lib/python3.8/site-packages/datasets/formatting/formatting.py", line 137, in _unnest return {key: array[0] for key, array in py_dict.items()} File "<path>/lib/python3.8/site-packages/datasets/formatting/formatting.py", line 137, in <dictcomp> return {key: array[0] for key, array in py_dict.items()} IndexError: invalid index of a 0-dim tensor. Use `tensor.item()` in Python or `tensor.item<T>()` in C++ to convert a 0-dim tensor to a number ``` ### Steps to reproduce the bug Load whichever dataset and add transform method to add 0-dim tensor. Or create/find a dataset containing 0-dim tensor. E.g. ```python from datasets import load_dataset import torch dataset = load_dataset("lambdalabs/pokemon-blip-captions", split='train') def t(batch): return {"test": torch.tensor(1)} dataset.set_transform(t) d_0 = dataset[0] ``` ### Expected behavior Extractor will correctly get a row from the dataset, even if it contains 0-dim tensor. ### Environment info `datasets==2.8.0`, but it looks like it is also applicable to main branch version (as of 16th February)
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load_dataset in seaborn is not working for me. getting this error.
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[ "Hi! `seaborn`'s `load_dataset` pulls datasets from [here](https://github.com/mwaskom/seaborn-data) and not from our Hub, so this issue is not related to our library in any way and should be reported in their repo instead." ]
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TimeoutError Traceback (most recent call last) ~\anaconda3\lib\urllib\request.py in do_open(self, http_class, req, **http_conn_args) 1345 try: -> 1346 h.request(req.get_method(), req.selector, req.data, headers, 1347 encode_chunked=req.has_header('Transfer-encoding')) ~\anaconda3\lib\http\client.py in request(self, method, url, body, headers, encode_chunked) 1278 """Send a complete request to the server.""" -> 1279 self._send_request(method, url, body, headers, encode_chunked) 1280 ~\anaconda3\lib\http\client.py in _send_request(self, method, url, body, headers, encode_chunked) 1324 body = _encode(body, 'body') -> 1325 self.endheaders(body, encode_chunked=encode_chunked) 1326 ~\anaconda3\lib\http\client.py in endheaders(self, message_body, encode_chunked) 1273 raise CannotSendHeader() -> 1274 self._send_output(message_body, encode_chunked=encode_chunked) 1275 ~\anaconda3\lib\http\client.py in _send_output(self, message_body, encode_chunked) 1033 del self._buffer[:] -> 1034 self.send(msg) 1035 ~\anaconda3\lib\http\client.py in send(self, data) 973 if self.auto_open: --> 974 self.connect() 975 else: ~\anaconda3\lib\http\client.py in connect(self) 1440 -> 1441 super().connect() 1442 ~\anaconda3\lib\http\client.py in connect(self) 944 """Connect to the host and port specified in __init__.""" --> 945 self.sock = self._create_connection( 946 (self.host,self.port), self.timeout, self.source_address) ~\anaconda3\lib\socket.py in create_connection(address, timeout, source_address) 843 try: --> 844 raise err 845 finally: ~\anaconda3\lib\socket.py in create_connection(address, timeout, source_address) 831 sock.bind(source_address) --> 832 sock.connect(sa) 833 # Break explicitly a reference cycle TimeoutError: [WinError 10060] A connection attempt failed because the connected party did not properly respond after a period of time, or established connection failed because connected host has failed to respond During handling of the above exception, another exception occurred: URLError Traceback (most recent call last) ~\AppData\Local\Temp/ipykernel_12220/2927704185.py in <module> 1 import seaborn as sn ----> 2 iris = sn.load_dataset('iris') ~\anaconda3\lib\site-packages\seaborn\utils.py in load_dataset(name, cache, data_home, **kws) 594 if name not in get_dataset_names(): 595 raise ValueError(f"'{name}' is not one of the example datasets.") --> 596 urlretrieve(url, cache_path) 597 full_path = cache_path 598 else: ~\anaconda3\lib\urllib\request.py in urlretrieve(url, filename, reporthook, data) 237 url_type, path = _splittype(url) 238 --> 239 with contextlib.closing(urlopen(url, data)) as fp: 240 headers = fp.info() 241 ~\anaconda3\lib\urllib\request.py in urlopen(url, data, timeout, cafile, capath, cadefault, context) 212 else: 213 opener = _opener --> 214 return opener.open(url, data, timeout) 215 216 def install_opener(opener): ~\anaconda3\lib\urllib\request.py in open(self, fullurl, data, timeout) 515 516 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method()) --> 517 response = self._open(req, data) 518 519 # post-process response ~\anaconda3\lib\urllib\request.py in _open(self, req, data) 532 533 protocol = req.type --> 534 result = self._call_chain(self.handle_open, protocol, protocol + 535 '_open', req) 536 if result: ~\anaconda3\lib\urllib\request.py in _call_chain(self, chain, kind, meth_name, *args) 492 for handler in handlers: 493 func = getattr(handler, meth_name) --> 494 result = func(*args) 495 if result is not None: 496 return result ~\anaconda3\lib\urllib\request.py in https_open(self, req) 1387 1388 def https_open(self, req): -> 1389 return self.do_open(http.client.HTTPSConnection, req, 1390 context=self._context, check_hostname=self._check_hostname) 1391 ~\anaconda3\lib\urllib\request.py in do_open(self, http_class, req, **http_conn_args) 1347 encode_chunked=req.has_header('Transfer-encoding')) 1348 except OSError as err: # timeout error -> 1349 raise URLError(err) 1350 r = h.getresponse() 1351 except: URLError: <urlopen error [WinError 10060] A connection attempt failed because the connected party did not properly respond after a period of time, or established connection failed because connected host has failed to respond>
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5,537
Increase speed of data files resolution
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[ "#self-assign", "You were right, if `self.dir_cache` is not None in glob, it is exactly the same as what is returned by find, at least for all the tests we have, and some extended evaluation I did across a random sample of about 1000 datasets. \r\n\r\nThanks for the nice hints, and let me know if this is not exactly what we want here!\r\n\r\nsee PR: https://github.com/huggingface/datasets/pull/5704\r\n\r\n", "I think we can make the data files resolution (significantly) faster in 2 steps:\r\n\r\n1. `glob` calls `find` (which in turn calls `ls`), so we need `find` to be fast, and this can be achieved by fetching all the entries in a single API call and avoiding calls to `ls`. Implementing this for `HfFileSystem.find` (the one in `huggingface_hub`) is on my TO-DO list.\r\n2. caching the repeated `find` calls in `_get_data_files_patterns` when the `data_files` patterns are not provided in `load_dataset`. To address this, we can introduce a `_resolve_single_pattern` function that would accept a filesystem object and a list of regex patterns to resolve. Then we can wrap this filesystem object in `_get_data_files_patterns` with an object that would cache the find calls before resolving the patterns with `_resolve_single_pattern`. (Feel free to suggest a cleaner implementation)\r\n\r\nWDYT?", "Good idea :) \r\n\r\nFor 2:\r\n\r\nThat would work ! It's also possible to have a FileSystem with a cache on `.find` and use it inside the resolver passed to `_get_data_files_patterns`. Right now they're pretty simple:\r\n\r\n```python\r\n# for remote repositories\r\nresolver = partial(_resolve_single_pattern_in_dataset_repository, dataset_info, base_path=base_path)\r\n# for local\r\nresolver = partial(_resolve_single_pattern_locally, base_path)\r\n```", "something like this maybe (with Quentin's reimplementation of `HfFilesystem.find`)?\r\n\r\n ```\r\n @lru_cache(max_size=None)\r\n def _find(self, path, maxdepth=None, withdirs=False, detail=False, **kwargs):\r\n```\r\n\r\nIn any case please let me know if I can help in any way!" ]
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Certain datasets like `bigcode/the-stack-dedup` have so many files that loading them takes forever right from the data files resolution step. `datasets` uses file patterns to check the structure of the repository but it takes too much time to iterate over and over again on all the data files. This comes from `resolve_patterns_in_dataset_repository` which calls `_resolve_single_pattern_in_dataset_repository`, which iterates on all the files at ```python glob_iter = [PurePath(filepath) for filepath in fs.glob(PurePath(pattern).as_posix()) if fs.isfile(filepath)] ``` but calling `glob` on such a dataset is too expensive. Indeed it calls `ls()` in `hffilesystem.py` too many times. Maybe `glob` can be more optimized in `hffilesystem.py`, or the data files resolution can directly be implemented in the filesystem by checking its `dir_cache` ?
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Failure to hash function when using .map()
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[ "Hi ! `enc` is not hashable:\r\n```python\r\nimport tiktoken\r\nfrom datasets.fingerprint import Hasher\r\n\r\nenc = tiktoken.get_encoding(\"gpt2\")\r\nHasher.hash(enc)\r\n# raises TypeError: cannot pickle 'builtins.CoreBPE' object\r\n```\r\nIt happens because it's not picklable, and because of that it's not possible to cache the result of `map`, hence the warning message.\r\n\r\nYou can find more details about caching here: https://huggingface.co/docs/datasets/about_cache\r\n\r\nYou can also provide your own unique hash in `map` if you want, with the `new_fingerprint` argument.\r\nOr disable caching using\r\n```python\r\nimport datasets\r\ndatasets.disable_caching()\r\n```", "@lhoestq Thank you for the explanation and advice. Will relay all of this to the repo where this (non)issue arose. \r\n\r\nGreat job with huggingface! ", "We made tiktoken tokenizers hashable in #5552, which is included in today's release `datasets==2.10.0`", "Just a heads up that when I'm trying to use TikToken along with the a given Dataset `.map()` method, I am still met with the following error :\r\n\r\n```\r\n File \"/opt/conda/lib/python3.8/site-packages/dill/_dill.py\", line 388, in save\r\n StockPickler.save(self, obj, save_persistent_id)\r\n File \"/opt/conda/lib/python3.8/pickle.py\", line 578, in save\r\n rv = reduce(self.proto)\r\nTypeError: cannot pickle 'builtins.CoreBPE' object\r\n```\r\n\r\nMy current environment is running datasets v2.10.0.", "cc @mariosasko " ]
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### Describe the bug _Parameter 'function'=<function process at 0x7f1ec4388af0> of the transform datasets.arrow_dataset.Dataset.\_map_single couldn't be hashed properly, a random hash was used instead. Make sure your transforms and parameters are serializable with pickle or dill for the dataset fingerprinting and caching to work. If you reuse this transform, the caching mechanism will consider it to be different from the previous calls and recompute everything. This warning is only showed once. Subsequent hashing failures won't be showed._ This issue with `.map()` happens for me consistently, as also described in closed issue #4506 Dataset indices can be individually serialized using dill and pickle without any errors. I'm using tiktoken to encode in the function passed to map(). Similarly, indices can be individually encoded without error. ### Steps to reproduce the bug ```py from datasets import load_dataset import tiktoken dataset = load_dataset("stas/openwebtext-10k") enc = tiktoken.get_encoding("gpt2") tokenized = dataset.map( process, remove_columns=['text'], desc="tokenizing the OWT splits", ) def process(example): ids = enc.encode(example['text']) ids.append(enc.eot_token) out = {'ids': ids, 'len': len(ids)} return out ``` ### Expected behavior Should encode simple text objects. ### Environment info Python versions tried: both 3.8 and 3.10.10 `PYTHONUTF8=1` as env variable Datasets tried: - stas/openwebtext-10k - rotten_tomatoes - local text file OS: Ubuntu Linux 20.04 Package versions: - torch 1.13.1 - dill 0.3.4 (if using 0.3.6 - same issue) - datasets 2.9.0 - tiktoken 0.2.0
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5,534
map() breaks at certain dataset size when using Array3D
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[ "Hi! This code works for me locally or in Colab. What's the output of `python -c \"import pyarrow as pa; print(pa.__version__)\"` when you run it inside your environment?", "Thanks for looking into this!\r\nThe output of `python -c \"import pyarrow as pa; print(pa.__version__)\"` is:\r\n```\r\n11.0.0\r\n```\r\n\r\nI did the following to setup the environment:\r\n```\r\nconda create -n datasets_debug python=3.9\r\nconda activate datasets_debug\r\npip install datasets==2.9.0\r\n```\r\n\r\nI just tested this on another machine (Ubuntu 18.04.6 LTS) with the same result as mentioned in the issue description.\r\n" ]
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### Describe the bug `map()` magically breaks when using a `Array3D` feature and mapping it. I created a very simple dummy dataset (see below). When filtering it down to 95 elements I can apply map, but it breaks when filtering it down to just 96 entries with the following exception: ``` Traceback (most recent call last): File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 3255, in _map_single writer.finalize() # close_stream=bool(buf_writer is None)) # We only close if we are writing in a file File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/arrow_writer.py", line 581, in finalize self.write_examples_on_file() File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/arrow_writer.py", line 440, in write_examples_on_file batch_examples[col] = array_concat(arrays) File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/table.py", line 1931, in array_concat return _concat_arrays(arrays) File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/table.py", line 1901, in _concat_arrays return array_type.wrap_array(_concat_arrays([array.storage for array in arrays])) File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/table.py", line 1922, in _concat_arrays _concat_arrays([array.values for array in arrays]), File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/table.py", line 1922, in _concat_arrays _concat_arrays([array.values for array in arrays]), File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/table.py", line 1920, in _concat_arrays return pa.ListArray.from_arrays( File "pyarrow/array.pxi", line 1997, in pyarrow.lib.ListArray.from_arrays File "pyarrow/array.pxi", line 1527, in pyarrow.lib.Array.validate File "pyarrow/error.pxi", line 100, in pyarrow.lib.check_status pyarrow.lib.ArrowInvalid: Negative offsets in list array During handling of the above exception, another exception occurred: Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 2815, in map return self._map_single( File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 546, in wrapper out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs) File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 513, in wrapper out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs) File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/fingerprint.py", line 480, in wrapper out = func(self, *args, **kwargs) File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 3259, in _map_single writer.finalize() File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/arrow_writer.py", line 581, in finalize self.write_examples_on_file() File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/arrow_writer.py", line 440, in write_examples_on_file batch_examples[col] = array_concat(arrays) File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/table.py", line 1931, in array_concat return _concat_arrays(arrays) File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/table.py", line 1901, in _concat_arrays return array_type.wrap_array(_concat_arrays([array.storage for array in arrays])) File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/table.py", line 1922, in _concat_arrays _concat_arrays([array.values for array in arrays]), File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/table.py", line 1922, in _concat_arrays _concat_arrays([array.values for array in arrays]), File "/home/arbi01/miniconda3/envs/tmp9/lib/python3.9/site-packages/datasets/table.py", line 1920, in _concat_arrays return pa.ListArray.from_arrays( File "pyarrow/array.pxi", line 1997, in pyarrow.lib.ListArray.from_arrays File "pyarrow/array.pxi", line 1527, in pyarrow.lib.Array.validate File "pyarrow/error.pxi", line 100, in pyarrow.lib.check_status pyarrow.lib.ArrowInvalid: Negative offsets in list array ``` ### Steps to reproduce the bug 1. put following dataset loading script into: debug/debug.py ```python import datasets import numpy as np class DEBUG(datasets.GeneratorBasedBuilder): """DEBUG dataset.""" def _info(self): return datasets.DatasetInfo( features=datasets.Features( { "id": datasets.Value("uint8"), "img_data": datasets.Array3D(shape=(3, 224, 224), dtype="uint8"), }, ), supervised_keys=None, ) def _split_generators(self, dl_manager): return [datasets.SplitGenerator(name=datasets.Split.TRAIN)] def _generate_examples(self): for i in range(149): image_np = np.zeros(shape=(3, 224, 224), dtype=np.int8).tolist() yield f"id_{i}", {"id": i, "img_data": image_np} ``` 2. try the following code: ```python import datasets def add_dummy_col(ex): ex["dummy"] = "test" return ex ds = datasets.load_dataset(path="debug", split="train") # works ds_filtered_works = ds.filter(lambda example: example["id"] < 95) print(f"filtered result size: {len(ds_filtered_works)}") # output: # filtered result size: 95 ds_mapped_works = ds_filtered_works.map(add_dummy_col) # fails ds_filtered_error = ds.filter(lambda example: example["id"] < 96) print(f"filtered result size: {len(ds_filtered_error)}") # output: # filtered result size: 96 ds_mapped_error = ds_filtered_error.map(add_dummy_col) ``` ### Expected behavior The example code does not fail. ### Environment info Python 3.9.16 (main, Jan 11 2023, 16:05:54); [GCC 11.2.0] :: Anaconda, Inc. on linux datasets 2.9.0
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train_test_split in arrow_dataset does not ensure to keep single classes in test set
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[ "Hi! You can get this behavior by specifying `stratify_by_column=\"label\"` in `train_test_split`.\r\n\r\nThis is the full example:\r\n```python\r\nimport numpy as np\r\nfrom datasets import Dataset, ClassLabel\r\n\r\ndata = [\r\n {'label': 0, 'text': \"example1\"},\r\n {'label': 1, 'text': \"example2\"},\r\n {'label': 1, 'text': \"example3\"},\r\n {'label': 1, 'text': \"example4\"},\r\n {'label': 0, 'text': \"example5\"},\r\n {'label': 1, 'text': \"example6\"},\r\n {'label': 2, 'text': \"example7\"},\r\n {'label': 2, 'text': \"example8\"}\r\n]\r\n\r\nfor _ in range(10):\r\n data_set = Dataset.from_list(data)\r\n data_set = data_set.cast_column(\"label\", ClassLabel(num_classes=3))\r\n data_set = data_set.train_test_split(test_size=0.5, stratify_by_column=\"label\")\r\n unique_labels_train = np.unique(data_set[\"train\"][:][\"label\"])\r\n unique_labels_test = np.unique(data_set[\"test\"][:][\"label\"])\r\n assert len(unique_labels_train) >= len(unique_labels_test) \r\n```\r\n" ]
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### Describe the bug When I have a dataset with very few (e.g. 1) examples per class and I call the train_test_split function on it, sometimes the single class will be in the test set. thus will never be considered for training. ### Steps to reproduce the bug ``` import numpy as np from datasets import Dataset data = [ {'label': 0, 'text': "example1"}, {'label': 1, 'text': "example2"}, {'label': 1, 'text': "example3"}, {'label': 1, 'text': "example4"}, {'label': 0, 'text': "example5"}, {'label': 1, 'text': "example6"}, {'label': 2, 'text': "example7"}, {'label': 2, 'text': "example8"} ] for _ in range(10): data_set = Dataset.from_list(data) data_set = data_set.train_test_split(test_size=0.5) data_set["train"] unique_labels_train = np.unique(data_set["train"][:]["label"]) unique_labels_test = np.unique(data_set["test"][:]["label"]) assert len(unique_labels_train) >= len(unique_labels_test) ``` ### Expected behavior I expect to have every available class at least once in my training set. ### Environment info - `datasets` version: 2.9.0 - Platform: Linux-5.15.65+-x86_64-with-debian-bullseye-sid - Python version: 3.7.12 - PyArrow version: 11.0.0 - Pandas version: 1.3.5
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This code fails: ```python from datasets import Dataset ds = Dataset.from_json(path_to_file) ds.data.validate() ``` raises ```python ArrowInvalid: Column 2: In chunk 1: Invalid: Struct child array #3 invalid: Invalid: Length spanned by list offsets (4064) larger than values array (length 4063) ``` This causes many issues for @TevenLeScao: - `map` fails because it fails to rewrite invalid arrow arrays ```python ~/Desktop/hf/datasets/src/datasets/arrow_writer.py in write_examples_on_file(self) 438 if all(isinstance(row[0][col], (pa.Array, pa.ChunkedArray)) for row in self.current_examples): 439 arrays = [row[0][col] for row in self.current_examples] --> 440 batch_examples[col] = array_concat(arrays) 441 else: 442 batch_examples[col] = [ ~/Desktop/hf/datasets/src/datasets/table.py in array_concat(arrays) 1885 1886 if not _is_extension_type(array_type): -> 1887 return pa.concat_arrays(arrays) 1888 1889 def _offsets_concat(offsets): ~/.virtualenvs/hf-datasets/lib/python3.7/site-packages/pyarrow/array.pxi in pyarrow.lib.concat_arrays() ~/.virtualenvs/hf-datasets/lib/python3.7/site-packages/pyarrow/error.pxi in pyarrow.lib.pyarrow_internal_check_status() ~/.virtualenvs/hf-datasets/lib/python3.7/site-packages/pyarrow/error.pxi in pyarrow.lib.check_status() ArrowIndexError: array slice would exceed array length ``` - `to_dict()` **segfaults** ⚠️ ```python /Users/runner/work/crossbow/crossbow/arrow/cpp/src/arrow/array/data.cc:99: Check failed: (off) <= (length) Slice offset greater than array length ``` To reproduce: unzip the archive and run the above code using `sanity_oscar_en.jsonl` [sanity_oscar_en.jsonl.zip](https://github.com/huggingface/datasets/files/10734124/sanity_oscar_en.jsonl.zip) PS: reading using pandas and converting to Arrow works though (note that the dataset lives in RAM in this case): ```python ds = Dataset.from_pandas(pd.read_json(path_to_file, lines=True)) ds.data.validate() ```
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[ "Thanks for reporting, @TJ-Solergibert.\r\n\r\nWe cannot access your Colab notebook: `There was an error loading this notebook. Ensure that the file is accessible and try again.`\r\nCould you please make it publicly accessible?\r\n", "I swear it's public, I've checked the settings and I've been able to open it in incognito mode.\r\n\r\nNotebook: https://colab.research.google.com/drive/1JCrS7FlGfu_kFqChMrwKZ_bpabnIMqbP?usp=sharing\r\n\r\nAnyway, this is the code to reproduce the error:\r\n\r\n```python3\r\nfrom datasets import ClassLabel\r\nfrom datasets import load_dataset\r\n\r\neuroparl_ds = load_dataset(\"tj-solergibert/Europarl-ST\")\r\n\r\nsource_lang = \"nl\"\r\nlanguages = list(europarl_ds[\"train\"][0][\"transcriptions\"].keys())\r\nClassLabels = ClassLabel(num_classes = len(languages), names = languages)\r\n\r\ndef map_label2id(example):\r\n example['dest_lang'] = ClassLabels.str2int(example['dest_lang'])\r\n return example\r\n\r\ndef unfold_transcriptions(example):\r\n for lang in languages:\r\n example[lang] = example[\"transcriptions\"][lang]\r\n return example\r\n\r\ndef unroll(batch, src_lang, dest_langs):\r\n source_t, dest_t, dest_l = [], [], []\r\n for lang in dest_langs: \r\n source_t += batch[src_lang]\r\n dest_t += batch[lang]\r\n dest_l += [lang]\r\n return_dict = {\"source_text\": source_t, \"dest_text\": dest_t, \"dest_lang\": dest_l}\r\n return return_dict\r\n\r\ndef preprocess_split(ds_split, src_lang):\r\n dest_langs = [x for x in languages if x != src_lang]\r\n\r\n ds_split = ds_split.map(unroll, fn_kwargs= {\"src_lang\": src_lang, \"dest_langs\": dest_langs}, batched = True, batch_size = 1, remove_columns= list(languages))\r\n ds_split = ds_split.filter(lambda x: x[\"source_text\"] != None and x[\"dest_text\"] != None) # Remove incomplete translations\r\n ds_split = ds_split.filter(lambda x: x[\"source_text\"] != \"None\" and x[\"dest_text\"] != \"None\")\r\n ds_split = ds_split.map(map_label2id) \r\n ds_split = ds_split.cast_column(\"dest_lang\", ClassLabels)\r\n return ds_split\r\n\r\ndef reset_cortas(example):\r\n for lang in languages:\r\n if isinstance(example[lang], str):\r\n if example[lang].isnumeric () or len(example[lang]) <= 5:\r\n example[lang] = \"None\"\r\n return example\r\n\r\ndef clean_dataset(dataset):\r\n # Remove columns\r\n dataset = dataset.remove_columns([\"original_speech\", \"original_language\", \"audio_path\", \"segment_start\", \"segment_end\"])\r\n # Unfold\r\n dataset = dataset.map(unfold_transcriptions, remove_columns = [\"transcriptions\"])\r\n dataset = dataset.map(reset_cortas)\r\n return dataset\r\n\r\nprocessed_europarl = clean_dataset(europarl_ds[\"test\"])\r\nnew_train_ds = preprocess_split(processed_europarl, 'nl')\r\n```", "Thanks, @TJ-Solergibert. I can access your notebook now. Maybe it was just a temporary issue.\r\n\r\nAt first sight, it seems something related to your data: maybe some of the examples do not have all the transcriptions for all the languages. Then, some of them are null when unrolled. And when trying to concatenate with the other rows containing strings, the cast issue is raised (the arrays to be concatenated have different types).\r\n\r\nDo you think this could be the case?", "See, in this example, \"nl\" and \"ro\" transcripts are null:\r\n```python\r\n>>> europarl_ds[\"test\"][:1]\r\n{'original_speech': ['− Señor Presidente, en primer lugar, quisiera felicitar al señor Seeber por el trabajo realizado, porque en su informe se recogen muchas de las preocupaciones manifestadas en esta'],\r\n 'original_language': ['es'],\r\n 'audio_path': ['es/audios/en.20081008.24.3-238.m4a'],\r\n 'segment_start': [0.6200000047683716],\r\n 'segment_end': [11.319999694824219],\r\n 'transcriptions': [{'de': '− Herr Präsident! Zunächst möchte ich Richard Seeber zu der von ihm geleisteten Arbeit gratulieren, denn sein Bericht greift viele der in diesem Haus zum Ausdruck gebrachten Anliegen',\r\n 'en': '− Mr President, firstly I would like to congratulate Mr Seeber on the work he has done, because his report picks up many of the concerns expressed in this',\r\n 'es': '− Señor Presidente, en primer lugar, quisiera felicitar al señor Seeber por el trabajo realizado, porque en su informe se recogen muchas de las preocupaciones manifestadas en esta',\r\n 'fr': '− Monsieur le Président, je voudrais tout d ’ abord féliciter M. Seeber pour le travail qu ’ il a effectué, parce que son rapport reprend beaucoup des inquiétudes exprimées au sein de cette',\r\n 'it': \"− Signor Presidente, mi congratulo innanzi tutto con l'onorevole Seeber per il lavoro svolto, perché la sua relazione accoglie molti dei timori espressi da quest'Aula\",\r\n 'nl': None,\r\n 'pl': '− Panie przewodniczący! Po pierwsze chciałabym pogratulować panu posłowi Seeberowi wykonanej pracy, ponieważ jego sprawozdanie podejmuje szereg podnoszonych w tej Izbie',\r\n 'pt': '− Senhor Presidente, começo por felicitar o senhor deputado Seeber pelo trabalho que desenvolveu em torno deste relatório, que retoma muitas das preocupações expressas nesta',\r\n 'ro': None}]}\r\n```\r\n```python\r\n>>> processed_europarl[0]\r\n{'de': '− Herr Präsident! Zunächst möchte ich Richard Seeber zu der von ihm geleisteten Arbeit gratulieren, denn sein Bericht greift viele der in diesem Haus zum Ausdruck gebrachten Anliegen',\r\n 'en': '− Mr President, firstly I would like to congratulate Mr Seeber on the work he has done, because his report picks up many of the concerns expressed in this',\r\n 'es': '− Señor Presidente, en primer lugar, quisiera felicitar al señor Seeber por el trabajo realizado, porque en su informe se recogen muchas de las preocupaciones manifestadas en esta',\r\n 'fr': '− Monsieur le Président, je voudrais tout d ’ abord féliciter M. Seeber pour le travail qu ’ il a effectué, parce que son rapport reprend beaucoup des inquiétudes exprimées au sein de cette',\r\n 'it': \"− Signor Presidente, mi congratulo innanzi tutto con l'onorevole Seeber per il lavoro svolto, perché la sua relazione accoglie molti dei timori espressi da quest'Aula\",\r\n 'nl': None,\r\n 'pl': '− Panie przewodniczący! Po pierwsze chciałabym pogratulować panu posłowi Seeberowi wykonanej pracy, ponieważ jego sprawozdanie podejmuje szereg podnoszonych w tej Izbie',\r\n 'pt': '− Senhor Presidente, começo por felicitar o senhor deputado Seeber pelo trabalho que desenvolveu em torno deste relatório, que retoma muitas das preocupações expressas nesta',\r\n 'ro': None}\r\n```", "You can fix this issue by forcing the cast of None to str by hand:\r\n- If you replace this line:\r\n```python\r\nsource_t += batch[src_lang]\r\n```\r\n- With this line (because the batch size is 1):\r\n```python\r\nsource_t += [str(batch[src_lang][0])]\r\n```\r\n- Or with this line (if the batch size were larger than 1):\r\n```python\r\nsource_t += [str(text) for text in batch[src_lang]]\r\n```", "Problem solved! Thanks @albertvillanova, now I have even increased the batch size and it's crazy fast :rocket: !" ]
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### Describe the bug Processing a dataset I alredy uploaded to the Hub (https://huggingface.co/datasets/tj-solergibert/Europarl-ST) I found that for some splits and some languages (test split, source_lang = "nl") after applying a map function I get the mentioned error. I alredy tried reseting the shorter strings (reset_cortas function). It only happends with NL, PL, RO and PT. It does not make sense since when processing the other languages I also use the corpus of those that fail and it does not cause any errors. I suspect that the error may be in this direction: We use cast_array_to_feature to support casting to custom types like Audio and Image # Also, when trying type "string", we don't want to convert integers or floats to "string". # We only do it if trying_type is False - since this is what the user asks for. ### Steps to reproduce the bug Here I link a colab notebook to reproduce the error: https://colab.research.google.com/drive/1JCrS7FlGfu_kFqChMrwKZ_bpabnIMqbP?authuser=1#scrollTo=FBAvlhMxIzpA ### Expected behavior Data processing does not fail. A correct example can be seen here: https://huggingface.co/datasets/tj-solergibert/Europarl-ST-processed-mt-en ### Environment info - `datasets` version: 2.9.0 - Platform: Linux-5.10.147+-x86_64-with-glibc2.29 - Python version: 3.8.10 - PyArrow version: 9.0.0 - Pandas version: 1.3.5
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Checking that split name is correct happens only after the data is downloaded
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### Describe the bug Verification of split names (=indexing data by split) happens after downloading the data. So when the split name is incorrect, users learn about that only after the data is fully downloaded, for large datasets it might take a lot of time. ### Steps to reproduce the bug Load any dataset with random split name, for example: ```python from datasets import load_dataset load_dataset("mozilla-foundation/common_voice_11_0", "en", split="blabla") ``` and the download will start smoothly, despite there is no split named "blabla". ### Expected behavior Raise error when split name is incorrect. ### Environment info `datasets==2.9.1.dev0`
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ClassLabel.cast_storage raises TypeError when called on an empty IntegerArray
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### Describe the bug `ClassLabel.cast_storage` raises `TypeError` when called on an empty `IntegerArray`. ### Steps to reproduce the bug Minimal steps: ```python import pyarrow as pa from datasets import ClassLabel ClassLabel(names=['foo', 'bar']).cast_storage(pa.array([], pa.int64())) ``` In practice, this bug arises in situations like the one below: ```python from datasets import ClassLabel, Dataset, Features, Sequence dataset = Dataset.from_dict({'labels': [[], []]}, features=Features({'labels': Sequence(ClassLabel(names=['foo', 'bar']))})) # this raises TypeError dataset.map(batched=True, batch_size=1) ``` ### Expected behavior `ClassLabel.cast_storage` should return an empty Int64Array. ### Environment info - `datasets` version: 2.9.1.dev0 - Platform: Linux-4.15.0-1032-aws-x86_64-with-glibc2.27 - Python version: 3.10.6 - PyArrow version: 11.0.0 - Pandas version: 1.5.3
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1,577,976,608
I_kwDODunzps5eDgMg
5,517
`with_format("numpy")` silently downcasts float64 to float32 features
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[ "Hi! This behavior stems from these lines:\r\n\r\nhttps://github.com/huggingface/datasets/blob/b065547654efa0ec633cf373ac1512884c68b2e1/src/datasets/formatting/np_formatter.py#L45-L46\r\n\r\nI agree we should preserve the original type whenever possible and downcast explicitly with a warning.\r\n\r\n@lhoestq Do you remember why we need this \"default dtype\" logic in our formatters?", "I was also wondering why the default type logic is needed. Me just deleting it is probably too naive of a solution.", "Hmm I think the idea was to end up with the usual default precision for deep learning models - no matter how the data was stored or where it comes from.\r\n\r\nFor example in NLP we store tokens using an optimized low precision to save disk space, but when we set the format to `torch` we actually need to get `int64`. Although the need for a default for integers also comes from numpy not returning the same integer precision depending on your machine. Finally I guess we added a default for floats as well for consistency.\r\n\r\nI'm a bit embarrassed by this though, as a user I'd have expected to get the same precision indeed as well and get a zero copy view.", "Will you fix this or should I open a PR?", "Unfortunately removing it for integers is a breaking change for most `transformers` + `datasets` users for NLP (which is a common case). Removing it for floats is a breaking change for `transformers` + `datasets` for ASR as well. And it also is a breaking change for the other users relying on this behavior.\r\n\r\nTherefore I think that the only short term solution is for the user to provide `dtype=` manually and document better this behavior. We could also extend `dtype` to accept a value that means \"return the same dtype as the underlying storage\" and make it easier to do zero copy.", "@lhoestq It should be fine to remove this conversion in Datasets 3.0, no? For now, we can warn the user (with a log message) about the future change when the default type is changed.", "Let's see with the transformers team if it sounds reasonable ? We'd have to fix multiple example scripts though.\r\n\r\nIf it's not ok we can also explore keeping this behavior only for tokens and audio data.", "IMO being coupled with Transformers can lead to unexpected behavior when one tries to use our lib without pairing it with Transformers, so I think it's still important to \"fix\" this, even if it means we will need to update Transformers' example scripts afterward.\r\n", "Ideally let's update the `transformers` example scripts before the change :P", "For others that run into the same issue: A temporary workaround for me is this:\r\n```python\r\ndef numpy_transform(batch):\r\n return {key: np.asarray(val) for key, val in batch.items()}\r\n\r\ndataset = dataset.with_transform(numpy_transform)\r\n```" ]
1,675,952,280,000
1,676,389,134,000
null
NONE
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### Describe the bug When I create a dataset with a `float64` feature, then apply numpy formatting the returned numpy arrays are silently downcasted to `float32`. ### Steps to reproduce the bug ```python import datasets dataset = datasets.Dataset.from_dict({'a': [1.0, 2.0, 3.0]}).with_format("numpy") print("feature dtype:", dataset.features['a'].dtype) print("array dtype:", dataset['a'].dtype) ``` output: ``` feature dtype: float64 array dtype: float32 ``` ### Expected behavior ``` feature dtype: float64 array dtype: float64 ``` ### Environment info - `datasets` version: 2.8.0 - Platform: Linux-5.4.0-135-generic-x86_64-with-glibc2.29 - Python version: 3.8.10 - PyArrow version: 10.0.1 - Pandas version: 1.4.4 ### Suggested Fix Changing [the `_tensorize` function of the numpy formatter](https://github.com/huggingface/datasets/blob/b065547654efa0ec633cf373ac1512884c68b2e1/src/datasets/formatting/np_formatter.py#L32) to ```python def _tensorize(self, value): if isinstance(value, (str, bytes, type(None))): return value elif isinstance(value, (np.character, np.ndarray)) and np.issubdtype(value.dtype, np.character): return value elif isinstance(value, np.number): return value return np.asarray(value, **self.np_array_kwargs) ``` fixes this particular issue for me. Not sure if this would break other tests. This should also avoid unnecessary copying of the array.
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5,514
Improve inconsistency of `Dataset.map` interface for `load_from_cache_file`
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[ "Hi, thanks for noticing this! We can't just remove the cache control as this allows us to control where the arrow files generated by the ops are written (cached on disk if enabled or a temporary directory if disabled). The right way to address this inconsistency would be by having `load_from_cache_file=None` by default everywhere.", "Hi! Yes, this seems more plausible. I can implement that. One last thing is the type annotation `load_from_cache_file: bool = None`. Which I then would change to `load_from_cache_file: Optional[bool] = None`.", "PR #5515 ", "Yes, `Optional[bool]` is the correct type annotation and thanks for the PR." ]
1,675,874,444,000
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CONTRIBUTOR
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### Feature request 1. Replace the `load_from_cache_file` default value to `True`. 2. Remove or alter checks from `is_caching_enabled` logic. ### Motivation I stumbled over an inconsistency in the `Dataset.map` interface. The documentation (and source) states for the parameter `load_from_cache_file`: ``` load_from_cache_file (`bool`, defaults to `True` if caching is enabled): If a cache file storing the current computation from `function` can be identified, use it instead of recomputing. ``` 1. `load_from_cache_file` default value is `None`, while being annotated as `bool` 2. It is inconsistent with other method signatures like `filter`, that have the default value `True` 3. The logic is inconsistent, as the `map` method checks if caching is enabled through `is_caching_enabled`. This logic is not used for other similar methods. ### Your contribution I am not fully aware of the logic behind caching checks. If this is just a inconsistency that historically grew, I would suggest to remove the `is_caching_enabled` logic as the "default" logic. Maybe someone can give insights, if environment variables have a higher priority than local variables or vice versa. If this is clarified, I could adjust the source according to the "Feature request" section of this issue.
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Some functions use a param named `type` shouldn't that be avoided since it's a Python reserved name?
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[ "Hi! Let's not do this - renaming it would be a breaking change, and going through the deprecation cycle is only worth it if it improves user experience.", "Hi @mariosasko, ok it makes sense. Anyway, don't you think it's worth it at some point to start a deprecation cycle e.g. `fs` in `load_from_disk`? It doesn't affect user experience but it's for sure a bad practice IMO, but's up to you 😄 Feel free to close this issue otherwise!" ]
1,675,869,226,000
1,675,872,067,000
null
CONTRIBUTOR
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Hi @mariosasko, @lhoestq, or whoever reads this! :) After going through `ArrowDataset.set_format` I found out that the `type` param is actually named `type` which is a Python reserved name as you may already know, shouldn't that be renamed to `format_type` before the 3.0.0 is released? Just wanted to get your input, and if applicable, tackle this issue myself! Thanks 🤗
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1,575,851,768
I_kwDODunzps5d7Zb4
5,511
Creating a dummy dataset from a bigger one
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[ "Update `datasets` or downgrade `huggingface-hub` ;)\r\n\r\nThe `huggingface-hub` lib did a breaking change a few months ago, and you're using an old version of `datasets` that does't support it", "Awesome thanks a lot! Everything works just fine with `datasets==2.9.0` :-) " ]
1,675,851,521,000
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1,675,852,548,000
MEMBER
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### Describe the bug I often want to create a dummy dataset from a bigger dataset for fast iteration when training. However, I'm having a hard time doing this especially when trying to upload the dataset to the Hub. ### Steps to reproduce the bug ```python from datasets import load_dataset dataset = load_dataset("lambdalabs/pokemon-blip-captions") dataset["train"] = dataset["train"].select(range(20)) dataset.push_to_hub("patrickvonplaten/dummy_image_data") ``` gives: ``` ~/python_bin/datasets/arrow_dataset.py in _push_parquet_shards_to_hub(self, repo_id, split, private, token, branch, max_shard_size, embed_external_files) 4003 base_wait_time=2.0, 4004 max_retries=5, -> 4005 max_wait_time=20.0, 4006 ) 4007 return repo_id, split, uploaded_size, dataset_nbytes ~/python_bin/datasets/utils/file_utils.py in _retry(func, func_args, func_kwargs, exceptions, status_codes, max_retries, base_wait_time, max_wait_time) 328 while True: 329 try: --> 330 return func(*func_args, **func_kwargs) 331 except exceptions as err: 332 if retry >= max_retries or (status_codes and err.response.status_code not in status_codes): ~/hf/lib/python3.7/site-packages/huggingface_hub/utils/_validators.py in _inner_fn(*args, **kwargs) 122 ) 123 --> 124 return fn(*args, **kwargs) 125 126 return _inner_fn # type: ignore TypeError: upload_file() got an unexpected keyword argument 'identical_ok' In [2]: ``` ### Expected behavior I would have expected this to work. It's for me the most intuitive way of creating a dummy dataset. ### Environment info ``` - `datasets` version: 2.1.1.dev0 - Platform: Linux-4.19.0-22-cloud-amd64-x86_64-with-debian-10.13 - Python version: 3.7.3 - PyArrow version: 11.0.0 - Pandas version: 1.3.5 ```
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Saving a dataset after setting format to torch doesn't work, but only if filtering
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[ "Hey, I'm a research engineer working on language modelling wanting to contribute to open source. I was wondering if I could give it a shot?", "Hi! This issue was fixed in https://github.com/huggingface/datasets/pull/4972, so please install `datasets>=2.5.0` to avoid it." ]
1,675,717,738,000
1,675,954,526,000
1,675,954,526,000
NONE
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### Describe the bug Saving a dataset after setting format to torch doesn't work, but only if filtering ### Steps to reproduce the bug ``` a = Dataset.from_dict({"b": [1, 2]}) a.set_format('torch') a.save_to_disk("test_save") # saves successfully a.filter(None).save_to_disk("test_save_filter") # does not >> [...] TypeError: Provided `function` which is applied to all elements of table returns a `dict` of types [<class 'torch.Tensor'>]. When using `batched=True`, make sure provided `function` returns a `dict` of types like `(<class 'list'>, <class 'numpy.ndarray'>)`. # note: skipping the format change to torch lets this work. ### Expected behavior Saving to work ### Environment info - `datasets` version: 2.4.0 - Platform: Linux-6.1.9-arch1-1-x86_64-with-glibc2.36 - Python version: 3.10.9 - PyArrow version: 9.0.0 - Pandas version: 1.4.4
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5,507
Optimise behaviour in respect to indices mapping
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_Originally [posted](https://huggingface.slack.com/archives/C02V51Q3800/p1675443873878489?thread_ts=1675418893.373479&cid=C02V51Q3800) on Slack_ Considering all this, perhaps for Datasets 3.0, we can do the following: * [ ] have `continuous=True` by default in `.shard` (requested in the survey and makes more sense for us since it doesn't create an indices mapping) * [x] allow calling `save_to_disk` on "unflattened" datasets * [ ] remove "hidden" expensive calls in `save_to_disk`, `unique`, `concatenate_datasets`, etc. For instance, instead of silently calling `flatten_indices` where it's needed, it's probably better to be explicit (considering how expensive these ops can be) and raise an error instead
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IterableDataset and Dataset return different batch sizes when using Trainer with multiple GPUs
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[ "Hi ! `datasets` doesn't do batching - the PyTorch DataLoader does and is created by the `Trainer`. Do you pass other arguments to training_args with respect to data loading ?\r\n\r\nAlso we recently released `.to_iterable_dataset` that does pretty much what you implemented, but using contiguous shards to get a better speed:\r\n```python\r\nif use_iterable_dataset:\r\n num_shards = 100\r\n dataset = dataset.to_iterable_dataset(num_shards=num_shards)\r\n```", "This is the full set of training args passed. No training args were changed when switching dataset types.\r\n\r\n```python\r\ntraining_args = TrainingArguments(\r\n output_dir=\"./checkpoints\",\r\n overwrite_output_dir=True,\r\n num_train_epochs=1,\r\n per_device_train_batch_size=256,\r\n save_steps=2000,\r\n save_total_limit=4,\r\n prediction_loss_only=True,\r\n report_to='none',\r\n gradient_accumulation_steps=6,\r\n fp16=True,\r\n max_steps=60000,\r\n lr_scheduler_type='linear',\r\n warmup_ratio=0.1,\r\n logging_steps=100,\r\n weight_decay=0.01,\r\n adam_beta1=0.9,\r\n adam_beta2=0.98,\r\n adam_epsilon=1e-6,\r\n learning_rate=1e-4\r\n)\r\n```", "I think the issue comes from `transformers`: https://github.com/huggingface/transformers/issues/21444", "Makes sense. Given that it's a `transformers` issue and already being tracked, I'll close this out." ]
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### Describe the bug I am training a Roberta model using 2 GPUs and the `Trainer` API with a batch size of 256. Initially I used a standard `Dataset`, but had issues with slow data loading. After reading [this issue](https://github.com/huggingface/datasets/issues/2252), I swapped to loading my dataset as contiguous shards and passing those to an `IterableDataset`. I observed an unexpected drop in GPU memory utilization, and found the batch size returned from the model had been cut in half. When using `Trainer` with 2 GPUs and a batch size of 256, `Dataset` returns a batch of size 512 (256 per GPU), while `IterableDataset` returns a batch size of 256 (256 total). My guess is `IterableDataset` isn't accounting for multiple cards. ### Steps to reproduce the bug ```python import datasets from datasets import IterableDataset from transformers import RobertaConfig from transformers import RobertaTokenizerFast from transformers import RobertaForMaskedLM from transformers import DataCollatorForLanguageModeling from transformers import Trainer, TrainingArguments use_iterable_dataset = True def gen_from_shards(shards): for shard in shards: for example in shard: yield example dataset = datasets.load_from_disk('my_dataset.hf') if use_iterable_dataset: n_shards = 100 shards = [dataset.shard(num_shards=n_shards, index=i) for i in range(n_shards)] dataset = IterableDataset.from_generator(gen_from_shards, gen_kwargs={"shards": shards}) tokenizer = RobertaTokenizerFast.from_pretrained("./my_tokenizer", max_len=160, use_fast=True) config = RobertaConfig( vocab_size=8248, max_position_embeddings=256, num_attention_heads=8, num_hidden_layers=6, type_vocab_size=1) model = RobertaForMaskedLM(config=config) data_collator = DataCollatorForLanguageModeling(tokenizer=tokenizer, mlm=True, mlm_probability=0.15) training_args = TrainingArguments( per_device_train_batch_size=256 # other args removed for brevity ) trainer = Trainer( model=model, args=training_args, data_collator=data_collator, train_dataset=dataset, ) trainer.train() ``` ### Expected behavior Expected `Dataset` and `IterableDataset` to have the same batch size behavior. If the current behavior is intentional, the batch size printout at the start of training should be updated. Currently, both dataset classes result in `Trainer` printing the same total batch size, even though the batch size sent to the GPUs are different. ### Environment info datasets 2.7.1 transformers 4.25.1
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PyTorch BatchSampler still loads from Dataset one-by-one
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[ "This change seems to come from a few months ago in the PyTorch side. That's good news and it means we may not need to pass a batch_sampler as soon as we add `Dataset.__getitems__` to get the optimal speed :)\r\n\r\nThanks for reporting ! Would you like to open a PR to add `__getitems__` and remove this outdated documentation ?", "Yeah I figured this was the sort of thing that probably once worked. I can confirm that you no longer need the batch sampler, just `batch_size=n` in the `DataLoader`.\r\n\r\nI'll pass on the PR, I'm flat out right now, sorry." ]
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### Describe the bug In [the docs here](https://huggingface.co/docs/datasets/use_with_pytorch#use-a-batchsampler), it mentions the issue of the Dataset being read one-by-one, then states that using a BatchSampler resolves the issue. I'm not sure if this is a mistake in the docs or the code, but it seems that the only way for a Dataset to be passed a list of indexes by PyTorch (instead of one index at a time) is to define a `__getitems__` method (note the plural) on the Dataset object, and since the HF Dataset doesn't have this, PyTorch executes [this line of code](https://github.com/pytorch/pytorch/blob/master/torch/utils/data/_utils/fetch.py#L58), reverting to fetching one-by-one. ### Steps to reproduce the bug You can put a breakpoint in `Dataset.__getitem__()` or just print the args from there and see that it's called multiple times for a single `next(iter(dataloader))`, even when using the code from the docs: ```py from torch.utils.data.sampler import BatchSampler, RandomSampler batch_sampler = BatchSampler(RandomSampler(ds), batch_size=32, drop_last=False) dataloader = DataLoader(ds, batch_sampler=batch_sampler) ``` ### Expected behavior The expected behaviour would be for it to fetch batches from the dataset, rather than one-by-one. To demonstrate that there is room for improvement: once I have a HF dataset `ds`, if I just add this line: ```py ds.__getitems__ = ds.__getitem__ ``` ...then the time taken to loop over the dataset improves considerably (for wikitext-103, from one minute to 13 seconds with batch size 32). Probably not a big deal in the grand scheme of things, but seems like an easy win. ### Environment info - `datasets` version: 2.9.0 - Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31 - Python version: 3.10.8 - PyArrow version: 10.0.1 - Pandas version: 1.5.3
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WMT19 custom download checksum error
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[ "I update the `datatsets` version and it works." ]
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### Describe the bug I use the following scripts to download data from WMT19: ```python import datasets from datasets import inspect_dataset, load_dataset_builder from wmt19.wmt_utils import _TRAIN_SUBSETS,_DEV_SUBSETS ## this is a must due to: https://discuss.huggingface.co/t/load-dataset-hangs-with-local-files/28034/3 if __name__ == '__main__': dev_subsets,train_subsets = [],[] for subset in _TRAIN_SUBSETS: if subset.target=='en' and 'de' in subset.sources: train_subsets.append(subset.name) for subset in _DEV_SUBSETS: if subset.target=='en' and 'de' in subset.sources: dev_subsets.append(subset.name) inspect_dataset("wmt19", "./wmt19") builder = load_dataset_builder( "./wmt19/wmt_utils.py", language_pair=("de", "en"), subsets={ datasets.Split.TRAIN: train_subsets, datasets.Split.VALIDATION: dev_subsets, }, ) builder.download_and_prepare() ds = builder.as_dataset() ds.to_json("../data/wmt19/ende/data.json") ``` And I got the following error: ``` Traceback (most recent call last): | 0/2 [00:00<?, ?obj/s] File "draft.py", line 26, in <module> builder.download_and_prepare() | 0/1 [00:00<?, ?obj/s] File "/Users/hannibal046/anaconda3/lib/python3.8/site-packages/datasets/builder.py", line 605, in download_and_prepare self._download_and_prepare(%| | 0/1 [00:00<?, ?obj/s] File "/Users/hannibal046/anaconda3/lib/python3.8/site-packages/datasets/builder.py", line 1104, in _download_and_prepare super()._download_and_prepare(dl_manager, verify_infos, check_duplicate_keys=verify_infos) | 0/1 [00:00<?, ?obj/s] File "/Users/hannibal046/anaconda3/lib/python3.8/site-packages/datasets/builder.py", line 676, in _download_and_prepare verify_checksums(s #13: 0%| | 0/1 [00:00<?, ?obj/s] File "/Users/hannibal046/anaconda3/lib/python3.8/site-packages/datasets/utils/info_utils.py", line 35, in verify_checksums raise UnexpectedDownloadedFile(str(set(recorded_checksums) - set(expected_checksums))) | 0/1 [00:00<?, ?obj/s] datasets.utils.info_utils.UnexpectedDownloadedFile: {'https://s3.amazonaws.com/web-language-models/paracrawl/release1/paracrawl-release1.en-de.zipporah0-dedup-clean.tgz', 'https://huggingface.co/datasets/wmt/wmt13/resolve/main-zip/training-parallel-europarl-v7.zip', 'https://huggingface.co/datasets/wmt/wmt18/resolve/main-zip/translation-task/rapid2016.zip', 'https://huggingface.co/datasets/wmt/wmt18/resolve/main-zip/translation-task/training-parallel-nc-v13.zip', 'https://huggingface.co/datasets/wmt/wmt17/resolve/main-zip/translation-task/training-parallel-nc-v12.zip', 'https://huggingface.co/datasets/wmt/wmt14/resolve/main-zip/training-parallel-nc-v9.zip', 'https://huggingface.co/datasets/wmt/wmt15/resolve/main-zip/training-parallel-nc-v10.zip', 'https://huggingface.co/datasets/wmt/wmt16/resolve/main-zip/translation-task/training-parallel-nc-v11.zip'} ``` ### Steps to reproduce the bug see above ### Expected behavior download data successfully ### Environment info datasets==2.1.0 python==3.8
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`load_dataset` has ~4 seconds of overhead for cached data
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[ "Hi ! To skip the verification step that checks if newer data exist, you can enable offline mode with `HF_DATASETS_OFFLINE=1`.\r\n\r\nAlthough I agree this step should be much faster for datasets hosted on the HF Hub - we could just compare the commit hash from the local data and the remote git repository. We're not been leveraging the git commit hashes, since the library was built before we even had git repositories for each dataset on HF.", "Thanks @lhoestq, for memory when I recorded those times I had `HF_DATASETS_OFFLINE` set." ]
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### Feature request When loading a dataset that has been cached locally, the `load_dataset` function takes a lot longer than it should take to fetch the dataset from disk (or memory). This is particularly noticeable for smaller datasets. For example, wikitext-2, comparing `load_data` (once cached) and `load_from_disk`, the `load_dataset` method takes 40 times longer. ⏱ 4.84s ⮜ load_dataset ⏱ 119ms ⮜ load_from_disk ### Motivation I assume this is doing something like checking for a newer version. If so, that's an age old problem: do you make the user wait _every single time they load from cache_ or do you do something like load from cache always, _then_ check for a newer version and alert if they have stale data. The decision usually revolves around what percentage of the time the data will have been updated, and how dangerous old data is. For most datasets it's extremely unlikely that there will be a newer version on any given run, so 99% of the time this is just wasted time. Maybe you don't want to make that decision for all users, but at least having the _option_ to not wait for checks would be an improvement. ### Your contribution .
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TypeError: 'bool' object is not iterable when filtering a datasets.arrow_dataset.Dataset
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[ "Hi! Instead of a single boolean, your filter function should return an iterable (of booleans) in the batched mode like so:\r\n```python\r\ntrain_dataset = train_dataset.filter(\r\n function=lambda batch: [image is not None for image in batch[\"image\"]], \r\n batched=True,\r\n batch_size=10)\r\n```\r\n\r\nPS: You can make this operation much faster by operating directly on the arrow data to skip the decoding part:\r\n```python\r\ntrain_dataset = train_dataset.with_format(\"arrow\")\r\ntrain_dataset = train_dataset.filter(\r\n function=lambda table: table[\"image\"].is_valid().to_pylist(), \r\n batched=True,\r\n batch_size=100)\r\ntrain_dataset = train_dataset.with_format(None)\r\n```", "Thank a lot!" ]
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1,675,531,176,000
NONE
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### Describe the bug Hi, Thanks for the amazing work on the library! **Describe the bug** I think I might have noticed a small bug in the filter method. Having loaded a dataset using `load_dataset`, when I try to filter out empty entries with `batched=True`, I get a TypeError. ### Steps to reproduce the bug ``` train_dataset = train_dataset.filter( function=lambda example: example["image"] is not None, batched=True, batch_size=10) ``` Error message: ``` File .../lib/python3.9/site-packages/datasets/fingerprint.py:480, in fingerprint_transform.<locals>._fingerprint.<locals>.wrapper(*args, **kwargs) 476 validate_fingerprint(kwargs[fingerprint_name]) 478 # Call actual function --> 480 out = func(self, *args, **kwargs) ... -> 5666 indices_array = [i for i, to_keep in zip(indices, mask) if to_keep] 5667 if indices_mapping is not None: 5668 indices_array = pa.array(indices_array, type=pa.uint64()) TypeError: 'bool' object is not iterable ``` **Removing batched=True allows to bypass the issue.** ### Expected behavior According to the doc, "[batch_size corresponds to the] number of examples per batch provided to function if batched = True", so we shouldn't need to remove the batchd=True arg? source: https://huggingface.co/docs/datasets/v2.9.0/en/package_reference/main_classes#datasets.Dataset.filter ### Environment info - `datasets` version: 2.9.0 - Platform: Linux-5.4.0-122-generic-x86_64-with-glibc2.31 - Python version: 3.9.10 - PyArrow version: 10.0.1 - Pandas version: 1.5.3
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1,567,301,765
I_kwDODunzps5dayCF
5,496
Add a `reduce` method
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[ "Hi! Sure, feel free to open a PR, so we can see the API you have in mind.", "I would like to give it a go! #self-assign" ]
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### Feature request Right now the `Dataset` class implements `map()` and `filter()`, but leaves out the third functional idiom popular among Python users: `reduce`. ### Motivation A `reduce` method is often useful when calculating dataset statistics, for example, the occurrence of a particular n-gram or the average line length of a code dataset. ### Your contribution I haven't contributed to `datasets` before, but I don't expect this will be too difficult, since the implementation will closely follow that of `map` and `filter`. I could have a crack over the weekend.
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I_kwDODunzps5dY4X8
5,495
to_tf_dataset fails with datetime UTC columns even if not included in columns argument
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[ "Hi! This is indeed a bug in our zero-copy logic.\r\n\r\nTo fix it, instead of the line:\r\nhttps://github.com/huggingface/datasets/blob/7cfac43b980ab9e4a69c2328f085770996323005/src/datasets/features/features.py#L702\r\n\r\nwe should have:\r\n```python\r\nreturn pa.types.is_primitive(pa_type) and not (pa.types.is_boolean(pa_type) or pa.types.is_temporal(pa_type))\r\n```", "@mariosasko submitted a small PR [here](https://github.com/huggingface/datasets/pull/5504)" ]
1,675,284,453,000
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CONTRIBUTOR
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### Describe the bug There appears to be some eager behavior in `to_tf_dataset` that runs against every column in a dataset even if they aren't included in the columns argument. This is problematic with datetime UTC columns due to them not working with zero copy. If I don't have UTC information in my datetime column, then everything works as expected. ### Steps to reproduce the bug ```python import numpy as np import pandas as pd from datasets import Dataset df = pd.DataFrame(np.random.rand(2, 1), columns=["x"]) # df["dt"] = pd.to_datetime(["2023-01-01", "2023-01-01"]) # works fine df["dt"] = pd.to_datetime(["2023-01-01 00:00:00.00000+00:00", "2023-01-01 00:00:00.00000+00:00"]) df.to_parquet("test.pq") ds = Dataset.from_parquet("test.pq") tf_ds = ds.to_tf_dataset(columns=["x"], batch_size=2, shuffle=True) ``` ``` ArrowInvalid Traceback (most recent call last) Cell In[1], line 12 8 df.to_parquet("test.pq") 11 ds = Dataset.from_parquet("test.pq") ---> 12 tf_ds = ds.to_tf_dataset(columns=["r"], batch_size=2, shuffle=True) File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:411, in TensorflowDatasetMixin.to_tf_dataset(self, batch_size, columns, shuffle, collate_fn, drop_remainder, collate_fn_args, label_cols, prefetch, num_workers) 407 dataset = self 409 # TODO(Matt, QL): deprecate the retention of label_ids and label --> 411 output_signature, columns_to_np_types = dataset._get_output_signature( 412 dataset, 413 collate_fn=collate_fn, 414 collate_fn_args=collate_fn_args, 415 cols_to_retain=cols_to_retain, 416 batch_size=batch_size if drop_remainder else None, 417 ) 419 if "labels" in output_signature: 420 if ("label_ids" in columns or "label" in columns) and "labels" not in columns: File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:254, in TensorflowDatasetMixin._get_output_signature(dataset, collate_fn, collate_fn_args, cols_to_retain, batch_size, num_test_batches) 252 for _ in range(num_test_batches): 253 indices = sample(range(len(dataset)), test_batch_size) --> 254 test_batch = dataset[indices] 255 if cols_to_retain is not None: 256 test_batch = {key: value for key, value in test_batch.items() if key in cols_to_retain} File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:2590, in Dataset.__getitem__(self, key) 2588 def __getitem__(self, key): # noqa: F811 2589 """Can be used to index columns (by string names) or rows (by integer index or iterable of indices or bools).""" -> 2590 return self._getitem( 2591 key, 2592 ) File ~/venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:2575, in Dataset._getitem(self, key, **kwargs) 2573 formatter = get_formatter(format_type, features=self.features, **format_kwargs) 2574 pa_subtable = query_table(self._data, key, indices=self._indices if self._indices is not None else None) -> 2575 formatted_output = format_table( 2576 pa_subtable, key, formatter=formatter, format_columns=format_columns, output_all_columns=output_all_columns 2577 ) 2578 return formatted_output File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:634, in format_table(table, key, formatter, format_columns, output_all_columns) 632 python_formatter = PythonFormatter(features=None) 633 if format_columns is None: --> 634 return formatter(pa_table, query_type=query_type) 635 elif query_type == "column": 636 if key in format_columns: File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:410, in Formatter.__call__(self, pa_table, query_type) 408 return self.format_column(pa_table) 409 elif query_type == "batch": --> 410 return self.format_batch(pa_table) File ~/venv/lib/python3.8/site-packages/datasets/formatting/np_formatter.py:78, in NumpyFormatter.format_batch(self, pa_table) 77 def format_batch(self, pa_table: pa.Table) -> Mapping: ---> 78 batch = self.numpy_arrow_extractor().extract_batch(pa_table) 79 batch = self.python_features_decoder.decode_batch(batch) 80 batch = self.recursive_tensorize(batch) File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:164, in NumpyArrowExtractor.extract_batch(self, pa_table) 163 def extract_batch(self, pa_table: pa.Table) -> dict: --> 164 return {col: self._arrow_array_to_numpy(pa_table[col]) for col in pa_table.column_names} File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:164, in <dictcomp>(.0) 163 def extract_batch(self, pa_table: pa.Table) -> dict: --> 164 return {col: self._arrow_array_to_numpy(pa_table[col]) for col in pa_table.column_names} File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:185, in NumpyArrowExtractor._arrow_array_to_numpy(self, pa_array) 181 else: 182 zero_copy_only = _is_zero_copy_only(pa_array.type) and all( 183 not _is_array_with_nulls(chunk) for chunk in pa_array.chunks 184 ) --> 185 array: List = [ 186 row for chunk in pa_array.chunks for row in chunk.to_numpy(zero_copy_only=zero_copy_only) 187 ] 188 else: 189 if isinstance(pa_array.type, _ArrayXDExtensionType): 190 # don't call to_pylist() to preserve dtype of the fixed-size array File ~/venv/lib/python3.8/site-packages/datasets/formatting/formatting.py:186, in <listcomp>(.0) 181 else: 182 zero_copy_only = _is_zero_copy_only(pa_array.type) and all( 183 not _is_array_with_nulls(chunk) for chunk in pa_array.chunks 184 ) 185 array: List = [ --> 186 row for chunk in pa_array.chunks for row in chunk.to_numpy(zero_copy_only=zero_copy_only) 187 ] 188 else: 189 if isinstance(pa_array.type, _ArrayXDExtensionType): 190 # don't call to_pylist() to preserve dtype of the fixed-size array File ~/venv/lib/python3.8/site-packages/pyarrow/array.pxi:1475, in pyarrow.lib.Array.to_numpy() File ~/venv/lib/python3.8/site-packages/pyarrow/error.pxi:100, in pyarrow.lib.check_status() ArrowInvalid: Needed to copy 1 chunks with 0 nulls, but zero_copy_only was True ``` ### Expected behavior I think there are two potential issues/fixes 1. Proper handling of datetime UTC columns (perhaps there is something incorrect with zero copy handling here) 2. Not eagerly running against every column in a dataset when the columns argument of `to_tf_dataset` specifies a subset of columns (although I'm not sure if this is unavoidable) ### Environment info - `datasets` version: 2.9.0 - Platform: macOS-13.2-x86_64-i386-64bit - Python version: 3.8.12 - PyArrow version: 11.0.0 - Pandas version: 1.5.3
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I_kwDODunzps5dYUN0
5,494
Update audio installation doc page
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[ "Totally agree, the docs should be in sync with our code.\r\n\r\nIndeed to avoid confusing users, I think we should have updated the docs at the same time as this PR:\r\n- #5167", "@albertvillanova yeah sure I should have, but I forgot back then, sorry for that 😶", "No, @polinaeterna, nothing to be sorry about.\r\n\r\nMy comment was for all of us datasets team, as a reminder: when making a PR, but also when reviewing some other's PR, we should not forget to update the corresponding docstring and doc pages. It is something we can improve if we help each other in reminding about it... :hugs: ", "@polinaeterna I think we can close this issue now as we no longer use `torchaudio` for decoding." ]
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Our [installation documentation page](https://huggingface.co/docs/datasets/installation#audio) says that one can use Datasets for mp3 only with `torchaudio<0.12`. `torchaudio>0.12` is actually supported too but requires a specific version of ffmpeg which is not easily installed on all linux versions but there is a custom ubuntu repo for it, we have insctructions in the code: https://github.com/huggingface/datasets/blob/main/src/datasets/features/audio.py#L327 So we should update the doc page. But first investigate [this issue](5488).
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Push_to_hub in a pull request
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[ "Assigned to myself and will get to it in the next week, but if someone finds this issue annoying and wants to submit a PR before I do, just ping me here and I'll reassign :). ", "I would like to be assigned to this issue, @nateraw . #self-assign" ]
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Right now `ds.push_to_hub()` can push a dataset on `main` or on a new branch with `branch=`, but there is no way to open a pull request. Even passing `branch=refs/pr/x` doesn't seem to work: it tries to create a branch with that name cc @nateraw It should be possible to tweak the use of `huggingface_hub` in `push_to_hub` to make it open a PR or push to an existing PR
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1,565,025,262
I_kwDODunzps5dSGPu
5,488
Error loading MP3 files from CommonVoice
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[ "Hi @kradonneoh, thanks for reporting.\r\n\r\nPlease note that to work with audio datasets (and specifically with MP3 files) we have detailed installation instructions in our docs: https://huggingface.co/docs/datasets/installation#audio\r\n- one of the requirements is torchaudio<0.12.0\r\n\r\nLet us know if the problem persists after having followed them.", "I saw that and have followed it (hence the Expected Behavior section of the bug report). \r\n\r\nIs there no intention of updating to the latest version? It does limit the version of `torch` I can use, which isn’t ideal.", "@kradonneoh hey! actually with `ffmpeg4` loading of mp3 files should work, so this is a not expected behavior and we need to investigate it. It works on my side with `torchaudio==0.13` and `ffmpeg==4.2.7`. Which `torchaudio` version do you use?\r\n\r\n`datasets` should support decoding of mp3 files with `torchaudio` when its version is `>0.12` but as you noted it requires `ffmpeg>4`, we need to fix this in the documentation, thank you for pointing to this! \r\n\r\nBut according to your traceback it seems that it tries to use [`libsndfile`](https://github.com/libsndfile/libsndfile) backend for mp3 decoding. And `libsndfile` library supports mp3 decoding starting from version 1.1.0 which on Linux has to be compiled from source for now afaik. \r\n\r\nfyi - we are aiming at getting rid of `torchaudio` dependency at all by the next major library release in favor of `libsndfile` too.", "We now decode MP3 with `soundfile`, so I'm closing this issue" ]
1,675,200,333,000
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### Describe the bug When loading a CommonVoice dataset with `datasets==2.9.0` and `torchaudio>=0.12.0`, I get an error reading the audio arrays: ```python --------------------------------------------------------------------------- LibsndfileError Traceback (most recent call last) ~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3(self, path_or_file) 310 try: # try torchaudio anyway because sometimes it works (depending on the os and os packages installed) --> 311 array, sampling_rate = self._decode_mp3_torchaudio(path_or_file) 312 except RuntimeError: ~/.local/lib/python3.8/site-packages/datasets/features/audio.py in _decode_mp3_torchaudio(self, path_or_file) 351 --> 352 array, sampling_rate = torchaudio.load(path_or_file, format="mp3") 353 if self.sampling_rate and self.sampling_rate != sampling_rate: ~/.local/lib/python3.8/site-packages/torchaudio/backend/soundfile_backend.py in load(filepath, frame_offset, num_frames, normalize, channels_first, format) 204 """ --> 205 with soundfile.SoundFile(filepath, "r") as file_: 206 if file_.format != "WAV" or normalize: ~/.local/lib/python3.8/site-packages/soundfile.py in __init__(self, file, mode, samplerate, channels, subtype, endian, format, closefd) 654 format, subtype, endian) --> 655 self._file = self._open(file, mode_int, closefd) 656 if set(mode).issuperset('r+') and self.seekable(): ~/.local/lib/python3.8/site-packages/soundfile.py in _open(self, file, mode_int, closefd) 1212 err = _snd.sf_error(file_ptr) -> 1213 raise LibsndfileError(err, prefix="Error opening {0!r}: ".format(self.name)) 1214 if mode_int == _snd.SFM_WRITE: LibsndfileError: Error opening <_io.BytesIO object at 0x7fa539462090>: File contains data in an unknown format. ``` I assume this is because there's some issue with the mp3 decoding process. I've verified that I have `ffmpeg>=4` (on a Linux distro), which appears to be the fallback backend for `torchaudio,` (at least according to #4889). ### Steps to reproduce the bug ```python dataset = load_dataset("mozilla-foundation/common_voice_11_0", "be", split="train") dataset[0] ``` ### Expected behavior Similar behavior to `torchaudio<0.12.0`, which doesn't result in a `LibsndfileError` ### Environment info - `datasets` version: 2.9.0 - Platform: Linux-5.15.0-52-generic-x86_64-with-glibc2.29 - Python version: 3.8.10 - PyArrow version: 10.0.1 - Pandas version: 1.5.1
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1,564,480,121
I_kwDODunzps5dQBJ5
5,487
Incorrect filepath for dill module
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[ "Hi! The correct path is still `dill._dill.XXXX` in the latest release. What do you get when you run `python -c \"import dill; print(dill.__version__)\"` in your environment?", "`0.3.6` I feel like that's bad news, because it's probably not the issue.\r\n\r\nMy mistake, about the wrong path guess. I think I didn't notice that the first `dill` in the path isn't supposed to be included in the path specification in python.\r\n<img width=\"146\" alt=\"Screen Shot 2023-01-31 at 12 58 32 PM\" src=\"https://user-images.githubusercontent.com/35349273/215844209-74af6a8f-9bff-4c75-9495-44c658c8e9f7.png\">\r\n", "Hi, @avivbrokman, this issue you report appeared only with old versions of dill. See:\r\n- #288\r\n\r\nAre you sure you are in the right Python environment?\r\n- Please note that Jupyter (where I guess you get the error) may have multiple execution backends (IPython kernels) that might be different from the Python environment your are using to get the dill version\r\n - Have you run `import dill; print(dill.__version__)` in the same Jupyter/IPython that you were using when you got the error while executing `import datasets`?", "I'm using spyder, and I am still getting `0.3.6` for `dill`, so unfortunately #288 isn't applicable, I think. However, I found something odd that I believe is a clue: \r\n\r\n```\r\nimport inspect\r\nimport dill\r\n\r\ninspect.getfile(dill)\r\n>>> '/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/dill/__init__.py'\r\n```\r\n\r\nI checked out the directory, and there is no `dill` subdirectory within '/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/dill`, as there should be. Rather, `_dill.py` is in '/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/dill` itself. \r\n\r\n If I run `pip install dill` or `pip install --upgrade dill`, I get the message `Requirement already satisfied: dill in ./opt/anaconda3/lib/python3.9/site-packages (0.3.6)`. If I run `conda upgrade dill`, I get the message `Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.` a couple of times, followed by\r\n\r\n```\r\nSolving environment: failed\r\nSolving environment: / \r\nFound conflicts! Looking for incompatible packages.\r\n```\r\n\r\nAnd then terminal proceeds to list conflicts between different packages I have.\r\n\r\nThis is all very strange to me because I recently uninstalled and reinstalled `anaconda`.\r\n", "As I said above, I guess this is not a problem with `datasets`. I think you have different Python environments: one with the new dill version (the one you get while using pip) and other with the old dill version (the one where you get the AttributeError).\r\n\r\nYou should update `dill` in the Python environment you are using within spyder.\r\n\r\nPlease note that the `_dill` module is present in the `dill` package since their 2.8.0 version." ]
1,675,177,268,000
1,677,255,516,000
1,677,255,516,000
NONE
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### Describe the bug I installed the `datasets` package and when I try to `import` it, I get the following error: ``` Traceback (most recent call last): File "/var/folders/jt/zw5g74ln6tqfdzsl8tx378j00000gn/T/ipykernel_3805/3458380017.py", line 1, in <module> import datasets File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/__init__.py", line 43, in <module> from .arrow_dataset import Dataset File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 66, in <module> from .arrow_writer import ArrowWriter, OptimizedTypedSequence File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/arrow_writer.py", line 27, in <module> from .features import Features, Image, Value File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/__init__.py", line 17, in <module> from .audio import Audio File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/features/audio.py", line 12, in <module> from ..download.streaming_download_manager import xopen File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/__init__.py", line 9, in <module> from .download_manager import DownloadManager, DownloadMode File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/download/download_manager.py", line 36, in <module> from ..utils.py_utils import NestedDataStructure, map_nested, size_str File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 602, in <module> class Pickler(dill.Pickler): File "/Users/avivbrokman/opt/anaconda3/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 605, in Pickler dispatch = dill._dill.MetaCatchingDict(dill.Pickler.dispatch.copy()) AttributeError: module 'dill' has no attribute '_dill' ``` Looking at the github source code for dill, it appears that `datasets` has a bug or is not compatible with the latest `dill`. Specifically, rather than `dill._dill.XXXX` it should be `dill.dill._dill.XXXX`. But given the popularity of `datasets` I feel confused about me being the first person to have this issue, so it makes me wonder if I'm misdiagnosing the issue. ### Steps to reproduce the bug Install `dill` and `datasets` packages and then `import datasets` ### Expected behavior I expect `datasets` to import. ### Environment info - `datasets` version: 2.9.0 - Platform: macOS-10.16-x86_64-i386-64bit - Python version: 3.9.13 - PyArrow version: 11.0.0 - Pandas version: 1.4.4
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1,564,059,749
I_kwDODunzps5dOahl
5,486
Adding `sep` to TextConfig
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[ "Hi @omar-araboghli, thanks for your proposal.\r\n\r\nHave you tried to use \"csv\" loader instead of \"text\"? That already has a `sep` argument.", "Hi @albertvillanova, thanks for the quick response!\r\n\r\nIndeed, I have been trying to use `csv` instead of `text`. However I am still not able to define range of rows as one sequence, that is achievable with passing `sample_by='paragraph'` to the `TextConfig`\r\n\r\nFor instance, the below code\r\n\r\n```python\r\nimport datasets\r\n\r\ndataset = datasets.load_dataset(\r\n path='csv',\r\n data_files={'train': TRAINING_SET_PATH},\r\n sep='\\t',\r\n header=None,\r\n column_names=['tokens', 'pos_tags', 'chunk_tags', 'ner_tags']\r\n)\r\n```\r\n\r\nleads to \r\n\r\n```python\r\ndataset\r\n>>> DatasetDict({\r\n train: Dataset({\r\n features: ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags'],\r\n num_rows: 62543\r\n })\r\n})\r\n\r\ndataset['train'][0]\r\n>>> {'tokens': 'Distribution',\r\n 'pos_tags': 'NN',\r\n 'chunk_tags': 'O',\r\n 'ner_tags': 'O'\r\n}\r\n```\r\nIs there a way to deal with multiple csv rows as one dataset instance, where each column is a sequence of those rows ?" ]
1,675,161,593,000
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I have a local a `.txt` file that follows the `CONLL2003` format which I need to load using `load_script`. However, by using `sample_by='line'`, one can only split the dataset into lines without splitting each line into columns. Would it be reasonable to add a `sep` argument in combination with `sample_by='paragraph'` to parse a paragraph into an array for each column ? If so, I am happy to contribute! ## Environment * `python 3.8.10` * `datasets 2.9.0` ## Snippet of `train.txt` ```txt Distribution NN O O and NN O O dynamics NN O O of NN O O electron NN O B-RP complexes NN O I-RP in NN O O cyanobacterial NN O B-R membranes NN O I-R The NN O O occurrence NN O O of NN O O prostaglandin NN O B-R F2α NN O I-R in NN O O Pharbitis NN O B-R seedlings NN O I-R grown NN O O under NN O O short NN O B-P days NN O I-P or NN O I-P days NN O I-P ``` ## Current Behaviour ```python # defining 4 features ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags'] here would fail with `ValueError: Length of names (4) does not match length of arrays (1)` dataset = datasets.load_dataset(path='text', features=features, data_files={'train': 'train.txt'}, sample_by='line') dataset['train']['tokens'][0] >>> 'Distribution\tNN\tO\tO' ``` ## Expected Behaviour / Suggestion ```python # suppose we defined 4 features ['tokens', 'pos_tags', 'chunk_tags', 'ner_tags'] dataset = datasets.load_dataset(path='text', features=features, data_files={'train': 'train.txt'}, sample_by='paragraph', sep='\t') dataset['train']['tokens'][0] >>> ['Distribution', 'and', 'dynamics', ... ] dataset['train']['ner_tags'][0] >>> ['O', 'O', 'O', ... ] ```
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Unable to upload dataset
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[ "Seems to work now, perhaps it was something internal with our university's network." ]
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### Describe the bug Uploading a simple dataset ends with an exception ### Steps to reproduce the bug I created a new conda env with python 3.10, pip installed datasets and: ```python >>> from datasets import load_dataset, load_from_disk, Dataset >>> d = Dataset.from_dict({"text": ["hello"] * 2}) >>> d.push_to_hub("ttt111") /home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/utils/_hf_folder.py:92: UserWarning: A token has been found in `/a/home/cc/students/cs/kirstain/.huggingface/token`. This is the old path where tokens were stored. The new location is `/home/olab/kirstain/.cache/huggingface/token` which is configurable using `HF_HOME` environment variable. Your token has been copied to this new location. You can now safely delete the old token file manually or use `huggingface-cli logout`. warnings.warn( Creating parquet from Arrow format: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:00<00:00, 279.94ba/s] Upload 1 LFS files: 0%| | 0/1 [00:02<?, ?it/s] Pushing dataset shards to the dataset hub: 0%| | 0/1 [00:04<?, ?it/s] Traceback (most recent call last): File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/utils/_errors.py", line 264, in hf_raise_for_status response.raise_for_status() File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/requests/models.py", line 1021, in raise_for_status raise HTTPError(http_error_msg, response=self) requests.exceptions.HTTPError: 403 Client Error: Forbidden for url: https://s3.us-east-1.amazonaws.com/lfs.huggingface.co/repos/cf/0c/cf0c5ab8a3f729e5f57a8b79a36ecea64a31126f13218591c27ed9a1c7bd9b41/ece885a4bb6bbc8c1bb51b45542b805283d74590f72cd4c45d3ba76628570386?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Content-Sha256=UNSIGNED-PAYLOAD&X-Amz-Credential=AKIA4N7VTDGO27GPWFUO%2F20230128%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20230128T151640Z&X-Amz-Expires=900&X-Amz-Signature=89e78e9a9d70add7ed93d453334f4f93c6f29d889d46750a1f2da04af73978db&X-Amz-SignedHeaders=host&x-amz-storage-class=INTELLIGENT_TIERING&x-id=PutObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/_commit_api.py", line 334, in _inner_upload_lfs_object return _upload_lfs_object( File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/_commit_api.py", line 391, in _upload_lfs_object lfs_upload( File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/lfs.py", line 273, in lfs_upload _upload_single_part( File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/lfs.py", line 305, in _upload_single_part hf_raise_for_status(upload_res) File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/utils/_errors.py", line 318, in hf_raise_for_status raise HfHubHTTPError(str(e), response=response) from e huggingface_hub.utils._errors.HfHubHTTPError: 403 Client Error: Forbidden for url: https://s3.us-east-1.amazonaws.com/lfs.huggingface.co/repos/cf/0c/cf0c5ab8a3f729e5f57a8b79a36ecea64a31126f13218591c27ed9a1c7bd9b41/ece885a4bb6bbc8c1bb51b45542b805283d74590f72cd4c45d3ba76628570386?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Content-Sha256=UNSIGNED-PAYLOAD&X-Amz-Credential=AKIA4N7VTDGO27GPWFUO%2F20230128%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20230128T151640Z&X-Amz-Expires=900&X-Amz-Signature=89e78e9a9d70add7ed93d453334f4f93c6f29d889d46750a1f2da04af73978db&X-Amz-SignedHeaders=host&x-amz-storage-class=INTELLIGENT_TIERING&x-id=PutObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/datasets/arrow_dataset.py", line 4909, in push_to_hub repo_id, split, uploaded_size, dataset_nbytes, repo_files, deleted_size = self._push_parquet_shards_to_hub( File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/datasets/arrow_dataset.py", line 4804, in _push_parquet_shards_to_hub _retry( File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 281, in _retry return func(*func_args, **func_kwargs) File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/utils/_validators.py", line 124, in _inner_fn return fn(*args, **kwargs) File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/hf_api.py", line 2537, in upload_file commit_info = self.create_commit( File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/utils/_validators.py", line 124, in _inner_fn return fn(*args, **kwargs) File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/hf_api.py", line 2346, in create_commit upload_lfs_files( File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/utils/_validators.py", line 124, in _inner_fn return fn(*args, **kwargs) File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/_commit_api.py", line 346, in upload_lfs_files thread_map( File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/tqdm/contrib/concurrent.py", line 94, in thread_map return _executor_map(ThreadPoolExecutor, fn, *iterables, **tqdm_kwargs) File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/tqdm/contrib/concurrent.py", line 76, in _executor_map return list(tqdm_class(ex.map(fn, *iterables, **map_args), **kwargs)) File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/tqdm/std.py", line 1195, in __iter__ for obj in iterable: File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/concurrent/futures/_base.py", line 621, in result_iterator yield _result_or_cancel(fs.pop()) File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/concurrent/futures/_base.py", line 319, in _result_or_cancel return fut.result(timeout) File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/concurrent/futures/_base.py", line 458, in result return self.__get_result() File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/concurrent/futures/_base.py", line 403, in __get_result raise self._exception File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/concurrent/futures/thread.py", line 58, in run result = self.fn(*self.args, **self.kwargs) File "/home/olab/kirstain/anaconda3/envs/datasets/lib/python3.10/site-packages/huggingface_hub/_commit_api.py", line 338, in _inner_upload_lfs_object raise RuntimeError( RuntimeError: Error while uploading 'data/train-00000-of-00001-6df93048e66df326.parquet' to the Hub. ``` ### Expected behavior The dataset should be uploaded without any exceptions ### Environment info - `datasets` version: 2.9.0 - Platform: Linux-4.15.0-65-generic-x86_64-with-glibc2.27 - Python version: 3.10.9 - PyArrow version: 11.0.0 - Pandas version: 1.5.3
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5,482
Reload features from Parquet metadata
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[ "I'd be happy to have a look, if nobody else has started working on this yet @lhoestq. \r\n\r\nIt seems to me that for the `arrow` format features are currently attached as metadata [in `datasets.arrow_writer`](https://github.com/huggingface/datasets/blob/5f810b7011a8a4ab077a1847c024d2d9e267b065/src/datasets/arrow_writer.py#L412) and retrieved from the metadata at `load_dataset` time using [`datasets.features.features.from_arrow_schema`](https://github.com/huggingface/datasets/blob/5f810b7011a8a4ab077a1847c024d2d9e267b065/src/datasets/features/features.py#L1602). \r\n\r\nThis will need to be replicated for `parquet` via calls to [this api](https://arrow.apache.org/docs/python/generated/pyarrow.parquet.write_metadata.html) from `io.parquet.ParquetWriter` and `io.parquet.ParquetReader` [respectively](https://github.com/huggingface/datasets/blob/5f810b7011a8a4ab077a1847c024d2d9e267b065/src/datasets/io/parquet.py#L104).\r\n\r\nAny other important considerations?\r\n", "Thanks @MFreidank ! That's correct :)\r\n\r\nReading the metadata to infer the features can be ideally done in the `parquet.py` file in `packaged_builder` when a parquet file is read. You can cast the arrow table to the schema you get from the features.arrow_schema", "#self-assign" ]
1,674,911,551,000
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The idea would be to allow this : ```python ds.to_parquet("my_dataset/ds.parquet") reloaded = load_dataset("my_dataset") assert ds.features == reloaded.features ``` And it should also work with Image and Audio types (right now they're reloaded as a dict type) This can be implemented by storing and reading the feature types in the parquet metadata, as we do for arrow files.
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I_kwDODunzps5dAtrj
5,481
Load a cached dataset as iterable
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[ "Can I work on this issue? I am pretty new to this.", "Hi ! Sure :) you can comment `#self-assign` to assign yourself to this issue.\r\n\r\nI can give you some pointers to get started:\r\n\r\n`load_dataset` works roughly this way:\r\n1. it instantiate a dataset builder using `load_dataset_builder()`\r\n2. the builder download and prepare the dataset as Arrow files in the cache using `download_and_prepare()`\r\n3. the builder returns a Dataset object with `as_dataset()`\r\n\r\nOne way to approach this would be to implement `as_iterable_dataset()` in `builder.py`.\r\n\r\nAnd similarly to `as_dataset()`, you can use the `ArrowReader`. It has a `get_file_instructions()` method that can be helpful. It gives you the files to read as list of dictionaries with those keys: `filename`, `skip` and `take`.\r\n\r\nThe `skip` and `take` arguments are used in case the user wants to load a subset of the dataset, e.g.\r\n```python\r\nload_dataset(..., split=\"train[:10]\")\r\n```\r\n\r\nLet me know if you have questions or if I can help :)", "This use-case is a bit specific, and `load_dataset` already has enough parameters (plus, `streaming=True` also returns an iterable dataset, so we would have to explain the difference), so I think it would be better to add `IterableDataset.from_file` to the API (more flexible and aligned with the goal from https://github.com/huggingface/datasets/issues/3444) instead.", "> This use-case is a bit specific\r\n\r\nThis allows to use `datasets` for large scale training where map-style datasets are too slow and use too much memory in PyTorch. So I would still consider adding it.\r\n\r\nAlternatively we could add this feature one level bellow:\r\n```python\r\nbuilder = load_dataset_builder(...)\r\nbuilder.download_and_prepare()\r\nids = builder.as_iterable_dataset()\r\n```", "Yes, I see how this can be useful. Still, I think `Dataset.to_iterable` + `IterableDataset.from_file` would be much cleaner in terms of the API design (and more flexible since `load_dataset` can only access the \"initial\" (unprocessed) version of a dataset).\r\n\r\nAnd since it can be tricky to manually find the \"initial\" version of a dataset in the cache, maybe `load_dataset` could return an iterable dataset streamed from the cache if `streaming=True` and the cache is up-to-date. ", "> This allows to use datasets for large scale training where map-style datasets are too slow and use too much memory in PyTorch.\r\n\r\nI second that. e.g. In my last experiment Oscar-en uses 16GB RSS RAM per process and when using multiple processes the host quickly runs out cpu memory. ", ">And since it can be tricky to manually find the \"initial\" version of a dataset in the cache, maybe load_dataset could return an iterable dataset streamed from the cache if streaming=True and the cache is up-to-date.\r\n\r\nThis is exactly the need on JeanZay (HPC) - I have the dataset cache ready, but the compute node is offline, so making streaming work off a local cache would address that need.\r\n\r\nIf you will have a working POC I can be the tester. ", "> Yes, I see how this can be useful. Still, I think Dataset.to_iterable + IterableDataset.from_file would be much cleaner in terms of the API design (and more flexible since load_dataset can only access the \"initial\" (unprocessed) version of a dataset).\r\n\r\nI like `IterableDataset.from_file` as well. On the other hand `Dataset.to_iterable` first requires to load a Dataset object, which can take time depending on your hardware and your dataset size (sometimes 1h+).\r\n\r\n> And since it can be tricky to manually find the \"initial\" version of a dataset in the cache, maybe load_dataset could return an iterable dataset streamed from the cache if streaming=True and the cache is up-to-date.\r\n\r\nThat would definitely do the job. I was suggesting a different parameter just to make explicit the difference between\r\n- streaming from the raw data\r\n- streaming from the local cache\r\n\r\nBut I'd be fine with streaming from cache is the cache is up-to-date since it's always faster. We could log a message as usual to make it explicit that the cache is used", "> I was suggesting a different parameter just to make explicit the difference between\r\n\r\nMosaicML's `streaming` library does the same (tries to stream from the local cache if possible), so logging a message should be explicit enough :).", "Ok ! Sounds good then :)", "Hi Both! It has been a while since my first issue so I am gonna go for this one ! #self-assign", "#self-assign" ]
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The idea would be to allow something like ```python ds = load_dataset("c4", "en", as_iterable=True) ``` To be used to train models. It would load an IterableDataset from the cached Arrow files. Cc @stas00 Edit : from the discussions we may load from cache when streaming=True
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audiofolder works on local env, but creates empty dataset in a remote one, what dependencies could I be missing/outdated
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### Describe the bug I'm using a custom audio dataset (400+ audio files) in the correct format for audiofolder. Although loading the dataset with audiofolder works in one local setup, it doesn't in a remote one (it just creates an empty dataset). I have both ffmpeg and libndfile installed on both computers, what could be missing/need to be updated in the one that doesn't work? On the remote env, libsndfile is 1.0.28 and ffmpeg is 4.2.1. from datasets import load_dataset ds = load_dataset("audiofolder", data_dir="...") Here is the output (should be generating 400+ rows): Downloading and preparing dataset audiofolder/default to ... Downloading data files: 0%| | 0/2 [00:00<?, ?it/s] Downloading data files: 0it [00:00, ?it/s] Extracting data files: 0it [00:00, ?it/s] Generating train split: 0 examples [00:00, ? examples/s] Dataset audiofolder downloaded and prepared to ... Subsequent calls will reuse this data. 0%| | 0/1 [00:00<?, ?it/s] DatasetDict({ train: Dataset({ features: ['audio', 'transcription'], num_rows: 1 }) }) Here is my pip environment in the one that doesn't work (uses torch 1.11.a0 from shared env): Package Version ------------------- ------------------- aiofiles 22.1.0 aiohttp 3.8.3 aiosignal 1.3.1 altair 4.2.1 anyio 3.6.2 appdirs 1.4.4 argcomplete 2.0.0 argon2-cffi 20.1.0 astunparse 1.6.3 async-timeout 4.0.2 attrs 21.2.0 audioread 3.0.0 backcall 0.2.0 bleach 4.0.0 certifi 2021.10.8 cffi 1.14.6 charset-normalizer 2.0.12 click 8.1.3 contourpy 1.0.7 cycler 0.11.0 datasets 2.9.0 debugpy 1.4.1 decorator 5.0.9 defusedxml 0.7.1 dill 0.3.6 distlib 0.3.4 entrypoints 0.3 evaluate 0.4.0 expecttest 0.1.3 fastapi 0.89.1 ffmpy 0.3.0 filelock 3.6.0 fonttools 4.38.0 frozenlist 1.3.3 fsspec 2023.1.0 future 0.18.2 gradio 3.16.2 h11 0.14.0 httpcore 0.16.3 httpx 0.23.3 huggingface-hub 0.12.0 idna 3.3 ipykernel 6.2.0 ipython 7.26.0 ipython-genutils 0.2.0 ipywidgets 7.6.3 jedi 0.18.0 Jinja2 3.0.1 jiwer 2.5.1 joblib 1.2.0 jsonschema 3.2.0 jupyter 1.0.0 jupyter-client 6.1.12 jupyter-console 6.4.0 jupyter-core 4.7.1 jupyterlab-pygments 0.1.2 jupyterlab-widgets 1.0.0 kiwisolver 1.4.4 Levenshtein 0.20.2 librosa 0.9.2 linkify-it-py 1.0.3 llvmlite 0.39.1 markdown-it-py 2.1.0 MarkupSafe 2.0.1 matplotlib 3.6.3 matplotlib-inline 0.1.2 mdit-py-plugins 0.3.3 mdurl 0.1.2 mistune 0.8.4 multidict 6.0.4 multiprocess 0.70.14 nbclient 0.5.4 nbconvert 6.1.0 nbformat 5.1.3 nest-asyncio 1.5.1 notebook 6.4.3 numba 0.56.4 numpy 1.20.3 orjson 3.8.5 packaging 21.0 pandas 1.5.3 pandocfilters 1.4.3 parso 0.8.2 pexpect 4.8.0 pickleshare 0.7.5 Pillow 9.4.0 pip 22.3.1 pipx 1.1.0 platformdirs 2.5.2 pooch 1.6.0 prometheus-client 0.11.0 prompt-toolkit 3.0.19 psutil 5.9.0 ptyprocess 0.7.0 pyarrow 10.0.1 pycparser 2.20 pycryptodome 3.16.0 pydantic 1.10.4 pydub 0.25.1 Pygments 2.10.0 pyparsing 2.4.7 pyrsistent 0.18.0 python-dateutil 2.8.2 python-multipart 0.0.5 pytz 2022.7.1 PyYAML 6.0 pyzmq 22.2.1 qtconsole 5.1.1 QtPy 1.10.0 rapidfuzz 2.13.7 regex 2022.10.31 requests 2.27.1 resampy 0.4.2 responses 0.18.0 rfc3986 1.5.0 scikit-learn 1.2.1 scipy 1.6.3 Send2Trash 1.8.0 setuptools 65.5.1 shiboken6 6.3.1 shiboken6-generator 6.3.1 six 1.16.0 sniffio 1.3.0 soundfile 0.11.0 starlette 0.22.0 terminado 0.11.0 testpath 0.5.0 threadpoolctl 3.1.0 tokenizers 0.13.2 toolz 0.12.0 torch 1.11.0a0+gitunknown tornado 6.1 tqdm 4.64.1 traitlets 5.0.5 transformers 4.27.0.dev0 types-dataclasses 0.6.4 typing_extensions 4.1.1 uc-micro-py 1.0.1 urllib3 1.26.9 userpath 1.8.0 uvicorn 0.20.0 virtualenv 20.14.1 wcwidth 0.2.5 webencodings 0.5.1 websockets 10.4 wheel 0.37.1 widgetsnbextension 3.5.1 xxhash 3.2.0 yarl 1.8.2 ### Steps to reproduce the bug Create a pip environment with the packages listed above (make sure ffmpeg and libsndfile is installed with same versions listed above). Create a custom audio dataset and load it in with load_dataset("audiofolder", ...) ### Expected behavior load_dataset should create a dataset with 400+ rows. ### Environment info - `datasets` version: 2.9.0 - Platform: Linux-3.10.0-1160.80.1.el7.x86_64-x86_64-with-glibc2.17 - Python version: 3.9.0 - PyArrow version: 10.0.1 - Pandas version: 1.5.3
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Unpin sqlalchemy once issue is fixed
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[ "@albertvillanova It looks like that issue has been fixed so I made a PR to unpin sqlalchemy! ", "The source issue:\r\n- https://github.com/pandas-dev/pandas/issues/40686\r\n\r\nhas been fixed:\r\n- https://github.com/pandas-dev/pandas/pull/48576\r\n\r\nThe fix was released yesterday (2023-04-03) only in `pandas-2.0.0`:\r\n- https://github.com/pandas-dev/pandas/releases/tag/v2.0.0\r\n\r\nbut it will not be back-ported to `pandas-1`:\r\n- https://github.com/pandas-dev/pandas/pull/48576#issuecomment-1466467159\r\n\r\nAlso note that `pandas-2.0.0` dropped support for Python 3.7:\r\n- https://github.com/pandas-dev/pandas/issues/41678\r\n- https://github.com/pandas-dev/pandas/pull/41989\r\n\r\nTherefore, we cannot unpin `sqlalchemy` until we drop support for Python 3.7 (these Python users cannot use `pandas-2`)." ]
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Once the source issue is fixed: - pandas-dev/pandas#51015 we should revert the pin introduced in: - #5476
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Dataset scan time is much slower than using native arrow
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[ "Hi ! In your code you only iterate on the Arrow buffers - you don't actually load the data as python objects. For a fair comparison, you can modify your code using:\r\n```diff\r\n- for _ in range(0, len(table), bsz):\r\n- _ = {k:table[k][_ : _ + bsz] for k in cols}\r\n+ for _ in range(0, len(table), bsz):\r\n+ _ = {k:table[k][_ : _ + bsz].to_pylist() for k in cols}\r\n```\r\n\r\nI re-ran your code and got a speed ratio of 1.00x and 1.02x", "Ah I see, datasets is implicitly making this conversion. Thanks for pointing that out!\r\n\r\nIf it's not too much, I would also suggest updating some of your docs with the same `.to_pylist()` conversion in the code snippet that follows [here](https://huggingface.co/course/chapter5/4?fw=pt#:~:text=let%E2%80%99s%20run%20a%20little%20speed%20test%20by%20iterating%20over%20all%20the%20elements%20in%20the%20PubMed%20Abstracts%20dataset%3A).", "This code snippet shows `datasets` code that reads the Arrow data as python objects already, there is no need to add to_pylist. Or were you thinking about something else ?" ]
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### Describe the bug I'm basically running the same scanning experiment from the tutorials https://huggingface.co/course/chapter5/4?fw=pt except now I'm comparing to a native pyarrow version. I'm finding that the native pyarrow approach is much faster (2 orders of magnitude). Is there something I'm missing that explains this phenomenon? ### Steps to reproduce the bug https://colab.research.google.com/drive/11EtHDaGAf1DKCpvYnAPJUW-LFfAcDzHY?usp=sharing ### Expected behavior I expect scan times to be on par with using pyarrow directly. ### Environment info standard colab environment
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Column project operation on `datasets.Dataset`
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[ "Hi ! This would be a nice addition indeed :) This sounds like a duplicate of https://github.com/huggingface/datasets/issues/5468\r\n\r\n> Not sure. Some of my PRs are still open and some do not have any discussions.\r\n\r\nSorry to hear that, feel free to ping me on those PRs" ]
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### Feature request There is no operation to select a subset of columns of original dataset. Expected API follows. ```python a = Dataset.from_dict({ 'int': [0, 1, 2] 'char': ['a', 'b', 'c'], 'none': [None] * 3, }) b = a.project('int', 'char') # usually, .select() print(a.column_names) # stdout: ['int', 'char', 'none'] print(b.column_names) # stdout: ['int', 'char'] ``` Method project can easily accept not only column names (as a `str)` but univariant function applied to corresponding column as an example. Or keyword arguments can be used in order to rename columns in advance (see `pandas`, `pyspark`, `pyarrow`, and SQL).. ### Motivation Projection is a typical operation in every data processing library. And it is a basic block of a well-known data manipulation language like SQL. Without this operation `datasets.Dataset` interface is not complete. ### Your contribution Not sure. Some of my PRs are still open and some do not have any discussions.
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Allow opposite of remove_columns on Dataset and DatasetDict
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[ "Hi! I agree it would be nice to have a method like that. Instead of `keep_columns`, we can name it `select_columns` to be more aligned with PyArrow's naming convention (`pa.Table.select`).", "Hi, I am a newbie to open source and would like to contribute. @mariosasko can I take up this issue ?", "Hey, I also want to work on this issue I am a newbie to open source. ", "This sounds related to https://github.com/huggingface/datasets/issues/5474\r\n\r\nI'm fine with `select_columns`, or we could also override `select` to also accept a list of columns maybe ?", "@lhoestq, I am planning to add a member function to the dataset class to perform the selection operation. Do you think its the right way to proceed? or there is a better option ?", "Unless @mariosasko thinks otherwise, I think it can go in `Dataset.select()` :)\r\nThough some parameters like keep_in_memory, indices_cache_file_name or writer_batch_size wouldn't when selecting columns, so we would need to update the docstring as well", "If someone wants to give it a shot, feel free to comment `#self-assign` and it will assign the issue to you.\r\n\r\nFeel free to ping us here if you have questions or if we can help :)", "I would rather have this functionality as a separate method. IMO it's always better to be explicit than to have an API where a single method can do different/uncorrelated things (somewhat reminds me of Pandas, and there is probably a good reason why PyArrow is more rigid in this aspect).", "In the end I also think it would be nice to have it as a separate method, this way we can also have it for `IterableDataset` (which can't have `select` for indices)" ]
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### Feature request In this blog post https://huggingface.co/blog/audio-datasets, I noticed the following code: ```python COLUMNS_TO_KEEP = ["text", "audio"] all_columns = gigaspeech["train"].column_names columns_to_remove = set(all_columns) - set(COLUMNS_TO_KEEP) gigaspeech = gigaspeech.remove_columns(columns_to_remove) ``` This kind of thing happens a lot when you don't need to keep all columns from the dataset. It would be more convenient (and less error prone) if you could just write: ```python gigaspeech = gigaspeech.keep_columns(["text", "audio"]) ``` Internally, `keep_columns` could still call `remove_columns`, but it expresses more clearly what the user's intent is. ### Motivation Less code to write for the user of the dataset. ### Your contribution -
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audiofolder creates empty dataset even though the dataset passed in follows the correct structure
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### Describe the bug The structure of my dataset folder called "my_dataset" is : data metadata.csv The data folder consists of all mp3 files and metadata.csv consist of file locations like 'data/...mp3 and transcriptions. There's 400+ mp3 files and corresponding transcriptions for my dataset. When I run the following: ds = load_dataset("audiofolder", data_dir="my_dataset") I get: Using custom data configuration default-... Downloading and preparing dataset audiofolder/default to /... Downloading data files: 0%| | 0/2 [00:00<?, ?it/s] Downloading data files: 0it [00:00, ?it/s] Extracting data files: 0it [00:00, ?it/s] Generating train split: 0 examples [00:00, ? examples/s] Dataset audiofolder downloaded and prepared to /.... Subsequent calls will reuse this data. 0%| | 0/1 [00:00<?, ?it/s] DatasetDict({ train: Dataset({ features: ['audio', 'transcription'], num_rows: 1 }) }) ### Steps to reproduce the bug Create a dataset folder called 'my_dataset' with a subfolder called 'data' that has mp3 files. Also, create metadata.csv that has file locations like 'data/...mp3' and their corresponding transcription. Run: ds = load_dataset("audiofolder", data_dir="my_dataset") ### Expected behavior It should generate a dataset with numerous rows. ### Environment info Run on Jupyter notebook
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NonMatchingChecksumError for hendrycks_test
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[ "Thanks for reporting, @sarahwie.\r\n\r\nPlease note this issue was already fixed in `datasets` 2.6.0 version:\r\n- #5040\r\n\r\nIf you update your `datasets` version, you will be able to load the dataset:\r\n```\r\npip install -U datasets\r\n```", "Oops, missed that I needed to upgrade. Thanks!" ]
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### Describe the bug The checksum of the file has likely changed on the remote host. ### Steps to reproduce the bug `dataset = nlp.load_dataset("hendrycks_test", "anatomy")` ### Expected behavior no error thrown ### Environment info - `datasets` version: 2.2.1 - Platform: macOS-13.1-arm64-arm-64bit - Python version: 3.9.13 - PyArrow version: 9.0.0 - Pandas version: 1.5.1
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Discrepancy in `nyu_depth_v2` dataset
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[ "Ccing @dwofk (the author of `fast-depth`). \r\n\r\nThanks, @awsaf49 for reporting this. I believe this is because the NYU Depth V2 shipped from `fast-depth` is already preprocessed. \r\n\r\nIf you think it might be better to have the NYU Depth V2 dataset from BTS [here](https://huggingface.co/datasets/sayakpaul/nyu_depth_v2) feel free to open a PR, I am happy to provide guidance :) ", "Good catch ! Ideally it would be nice to have the datasets in the raw form, this way users can choose whatever processing they want to apply", "> Ccing @dwofk (the author of `fast-depth`).\r\n> \r\n> Thanks, @awsaf49 for reporting this. I believe this is because the NYU Depth V2 shipped from `fast-depth` is already preprocessed.\r\n> \r\n> If you think it might be better to have the NYU Depth V2 dataset from BTS [here](https://huggingface.co/datasets/sayakpaul/nyu_depth_v2) feel free to open a PR, I am happy to provide guidance :)\r\n\r\n@sayakpaul I would love to create a PR on this. As this will be my first PR here, some guidance would be helpful.\r\n\r\nNeed a bit of advice on the dataset, there are three publicly available datasets. Which one should I consider for PR?\r\n1. [BTS](https://github.com/cleinc/bts): Containst train/test: 36K/654 data, dtype = `uint16` hence more precise\r\n2. [DenseDepth](https://github.com/ialhashim/DenseDepth) It contains train/test: 50K/654 data, dtype = `uint8` hence less precise\r\n3. [Official](https://cs.nyu.edu/~silberman/datasets/nyu_depth_v2.html#raw_parts): Size is big 400GB+, requires **MatLab** code for fixing **projection** and **sync**, DataType: `pgm` and `dump` hence can't be used directly.\r\n\r\ncc: @lhoestq\r\n\r\n", "I think BTS. Repositories like https://github.com/vinvino02/GLPDepth usually use BTS. Also, just for clarity, the PR will be to https://huggingface.co/datasets/sayakpaul/nyu_depth_v2. Once we have worked it out, we can update the following things:\r\n\r\n* https://github.com/huggingface/blog/pull/718\r\n* https://huggingface.co/docs/datasets/main/en/depth_estimation\r\n\r\nDon't worry about it if it seems overwhelming. We will work it out together :) \r\n\r\n@lhoestq what do you think? ", "@sayakpaul If I get this right I have to,\r\n1. Create a PR on https://huggingface.co/datasets/sayakpaul/nyu_depth_v2\r\n2. Create a PR on https://github.com/huggingface/blog\r\n3. Create a PR on https://github.com/huggingface/datasets to update https://github.com/huggingface/datasets/blob/main/docs/source/depth_estimation.mdx", "The last two are low-hanging fruits. Don't worry about them. ", "Yup opening a PR to use BTS on https://huggingface.co/datasets/sayakpaul/nyu_depth_v2 sounds good :) Thanks for the help !", "Finally, I have found the origin of the **discretized depth map**. When I first loaded the datasets from HF I noticed it was 30GB but in DenseDepth data is only 4GB with dtype=uint8. This means data from fast-depth (before loading to HF) must have high precision. So when I tried to dig deeper by directly loading depth_map from `h5py`, I found depth_map from `h5py` came with `float32`. But when the data is processed in HF with `datasets.Image()` it was directly converted to `uint8` from `float32` hence the **discretized** depth map.\r\nhttps://github.com/huggingface/datasets/blob/c78559cacbb0ca6e0bc8bfc313cc0359f8c23ead/src/datasets/features/image.py#L91-L93\r\n\r\n## Solutions:\r\n\r\n#### 1. Array2D\r\nUse `Array2D` feature with `float32` for depth_map \r\n\r\n* Code:\r\n```py\r\nFeatures({'depth_map': Array2D(shape=(480, 640), dtype='float32')})\r\n```\r\n* Pros:\r\nNo precision loss.\r\n\r\n* Cons:\r\nAs depth_map is saved as Array I think it can't be visuzlied in [hf.co/dataset](https://huggingface.co/datasets/sayakpaul/nyu_depth_v2) page like segmentation mask.\r\n\r\n#### 2. Uint16\r\nUse `uint16` as dtype for Image in `_h5_loader` for saving depth maps and accept `uint16` dtype in `datasets.Image()` feature.\r\n\r\n* Code\r\n```py\r\ndepth = np.array(h5f[\"depth\"])\r\ndepth /= 10.0 # [0, max_depth] -> [0, 1]\r\ndepth *= (2**16 -1) # transform from [0, 1] -> [0, 2^16 - 1]\r\ndepth = depth.astype('uint16')\r\n```\r\n* Pros:\r\n * We can visualize depth map in hf.co/datasets page like segmentation mask.\r\n * No need for post-processing.\r\n\r\n* Cons:\r\n * We need to make two change\r\n * Modify `_h5_loader` in https://huggingface.co/datasets/sayakpaul/nyu_depth_v2 to convert depth_map from `float32` to `uint16`.\r\n * Make sure `datasets.Image()` converts `np.ndarray` to `uint16` checking max value\r\n * Precision loss due to `float32` to `uint16`\r\n * Post-processing required for depth_map to transform from `[0, 2^16 - 1]` to `[0, max_depth]` before feeding them to model.", "Thanks so much for digging into this. \r\n\r\nSince the second solution entails changes to core datatypes in `datasets`, I think it's better to go with the first solution. \r\n\r\n@lhoestq WDYT?", "@sayakpaul Yes, Solution 1 requires minimal change and provides no precision loss. But I think support for `uint16` image would be a great addition as many datasets come with `uint16` image. For example [UW-Madison GI Tract Image Segmentation](https://www.kaggle.com/competitions/uw-madison-gi-tract-image-segmentation) dataset, here the image itself comes with `uint16` dtype rather than mask. So, saving `uint16` image with `uint8` will result in precision loss.\r\n\r\nPerhaps we can adapt solution 1 for this issue and Add support for `uint16` image separately?", "Using Array2D makes it not practical to use to train a model - in `transformers` we expect an image type.\r\n\r\nThere is a pull request to support more precision than uint8 in Image() here: https://github.com/huggingface/datasets/pull/5365/files\r\n\r\nwe can probably merge it today and do a release right away", "Fantastic, @lhoestq! \r\n\r\n@awsaf49 then let's wait for the PR to get merged and then take the next steps? ", "Sure", "The PR adds support for uint16 which is ok for BTS if I understand correctly, would it be ok for you ?", "If the main issue with the current version of NYU we have on the Hub is related to the precision loss stemming from `Image()`, I'd prefer if `Image()` supported float32 as well. ", "I also prefer `float32` as it offers more precision. But I'm not sure if we'll be able to visualize image with `float32` precision.", "We could have a separate loading for the float32 one using Array2D, but I feel like it's less convenient to use due to the amount of disk space and because it's not an Image() type. That's why I think uint16 is a better solution for users", "A bit confused here, If https://github.com/huggingface/datasets/pull/5365 gets merged won't this issue will be resolved automatically?", "Yes in theory :)", "actually float32 also seems to work in this PR (it just doesn't work for multi-channel)", "In that case, a new PR isn't necessary, right?", "Yep. I just tested from the PR and it works:\r\n```python\r\n>>> train_dataset = load_dataset(\"sayakpaul/nyu_depth_v2\", split=\"train\", streaming=True) \r\nDownloading readme: 100%|██████████████████| 8.71k/8.71k [00:00<00:00, 3.60MB/s]\r\n>>> next(iter(train_dataset))\r\n{'image': <PIL.PngImagePlugin.PngImageFile image mode=RGB size=640x480 at 0x1382ED7F0>,\r\n 'depth_map': <PIL.TiffImagePlugin.TiffImageFile image mode=F size=640x480 at 0x1382EDF28>}\r\n>>> x = next(iter(train_dataset))\r\n>>> np.asarray(x[\"depth_map\"]) \r\narray([[0. , 0. , 0. , ..., 0. , 0. ,\r\n 0. ],\r\n [0. , 0. , 0. , ..., 0. , 0. ,\r\n 0. ],\r\n [0. , 0. , 0. , ..., 0. , 0. ,\r\n 0. ],\r\n ...,\r\n [0. , 2.2861192, 2.2861192, ..., 2.234162 , 2.234162 ,\r\n 0. ],\r\n [0. , 2.2861192, 2.2861192, ..., 2.234162 , 2.234162 ,\r\n 0. ],\r\n [0. , 2.2861192, 2.2861192, ..., 2.234162 , 2.234162 ,\r\n 0. ]], dtype=float32)\r\n```", "Great! the case is closed! This issue has been solved and I have to say, it was quite the thrill ride. I felt like Sherlock Holmes, solving a mystery and finding the bug🕵️‍♂️. But in all seriousness, it was a pleasure working on this issue and I'm glad we could get to the bottom of it.\r\n\r\nOn another note, should I consider closing the issue? I think we still need to make updates on https://github.com/huggingface/blog and https://github.com/huggingface/datasets/blob/main/docs/source/depth_estimation.mdx", "Haha thanks Mr Holmes :p\r\n\r\nmaybe let's close this issue when we're done updating the blog post and the documentation", "@awsaf49 thank you for your hard work! \r\n\r\nI am a little unsure why the other links need to be updated, though. They all rely on datasets internally. ", "I think depth_map still shows discretized version. It would be nice to have corrected one.\r\n<img src=\"https://huggingface.co/datasets/huggingface/documentation-images/resolve/main/datasets/depth_est_target_viz.png\" width = 300>", "Also, I think we need to make some changes in the code to visualize depth_map as it is `float32` . `plot.imshow()` supports either [0, 1] + float32 or [0. 255] + uint8", "Oh yes! Do you want to start with the fixes? Please feel free to say no but I wanted to make sure your contributions are reflected properly in our doc and the blog :)", "Yes I think that would be nice :)", "I'll make the changes tomorrow. I hope it's okay..." ]
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CONTRIBUTOR
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### Describe the bug I think there is a discrepancy between depth map of `nyu_depth_v2` dataset [here](https://huggingface.co/docs/datasets/main/en/depth_estimation) and actual depth map. Depth values somehow got **discretized/clipped** resulting in depth maps that are different from actual ones. Here is a side-by-side comparison, ![image](https://user-images.githubusercontent.com/36858976/214381162-1d9582c2-6750-4114-a01a-61ca1cd5f872.png) I tried to find the origin of this issue but sadly as I mentioned in tensorflow/datasets/issues/4674, the download link from `fast-depth` doesn't work anymore hence couldn't verify if the error originated there or during porting data from there to HF. Hi @sayakpaul, as you worked on huggingface/datasets/issues/5255, if you still have access to that data could you please share the data or perhaps checkout this issue? ### Steps to reproduce the bug This [notebook](https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing#scrollTo=UEW7QSh0jf0i) from @sayakpaul could be used to generate depth maps and actual ground truths could be checked from this [dataset](https://www.kaggle.com/datasets/awsaf49/nyuv2-bts-dataset) from BTS repo. > Note: BTS dataset has only 36K data compared to the train-test 50K. They sampled the data as adjacent frames look quite the same ### Expected behavior Expected depth maps should be smooth rather than discrete/clipped. ### Environment info - `datasets` version: 2.8.1.dev0 - Platform: Linux-5.10.147+-x86_64-with-glibc2.29 - Python version: 3.8.10 - PyArrow version: 9.0.0 - Pandas version: 1.3.5
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slice split while streaming
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[ "Hi! Yes, that's correct. When `streaming` is `True`, only split names can be specified as `split`, and for slicing, you have to use `.skip`/`.take` instead.\r\n\r\nE.g. \r\n`load_dataset(\"lhoestq/demo1\",revision=None, streaming=True, split=\"train[:3]\")`\r\n\r\nrewritten with `.skip`/`.take`:\r\n`load_dataset(\"lhoestq/demo1\",revision=None, streaming=True, split=\"train\").take(3)`\r\n\r\n\r\n", "Thank you for your quick response!" ]
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### Describe the bug When using the `load_dataset` function with streaming set to True, slicing splits is apparently not supported. Did I miss this in the documentation? ### Steps to reproduce the bug `load_dataset("lhoestq/demo1",revision=None, streaming=True, split="train[:3]")` causes ValueError: Bad split: train[:3]. Available splits: ['train', 'test'] in builder.py, line 1213, in as_streaming_dataset ### Expected behavior The first 3 entries of the dataset as a stream ### Environment info - `datasets` version: 2.8.0 - Platform: Windows-10-10.0.19045-SP0 - Python version: 3.10.9 - PyArrow version: 10.0.1 - Pandas version: 1.5.2
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prebuilt dataset relies on `downloads/extracted`
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[ "Hi! \r\n\r\nThis issue is due to our audio/image datasets not being self-contained. This allows us to save disk space (files are written only once) but also leads to the issues like this one. We plan to make all our datasets self-contained in Datasets 3.0.\r\n\r\nIn the meantime, you can run the following map to ensure your dataset is self-contained:\r\n```python\r\nfrom datasets.table import embed_table_storage\r\n# load_dataset ...\r\ndset = dset.with_format(\"arrow\")\r\ndset.map(embed_table_storage, batched=True)\r\ndset = dset.with_format(\"python\")\r\n```\r\n", "Understood. Thank you, Mario.\r\n\r\nPerhaps the solution could be very simple - move the extracted files into the directory of the cached dataset? Which would make it self-contained already and won't require waiting for a new major release. Unless I'm missing some back-compat nuance.\r\n\r\nBut regardless if X relies on Y - it could check if Y is still there when loading X. so not checking full consistency but just the top-level directory it relies on." ]
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### Describe the bug I pre-built the dataset: ``` python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing ``` and it can be used just fine. now I wipe out `downloads/extracted` and it no longer works. ``` rm -r ~/.cache/huggingface/datasets/downloads ``` That is I can still load it: ``` python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing No config specified, defaulting to: general-pmd-synthetic-testing/100.unique Found cached dataset general-pmd-synthetic-testing (/home/stas/.cache/huggingface/datasets/HuggingFaceM4___general-pmd-synthetic-testing/100.unique/1.1.1/86bc445e3e48cb5ef79de109eb4e54ff85b318cd55c3835c4ee8f86eae33d9d2) ``` but if I try to use it: ``` E stderr: Traceback (most recent call last): E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/main.py", line 116, in <module> E stderr: train_loader, val_loader = get_dataloaders( E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 170, in get_dataloaders E stderr: train_loader = get_dataloader_from_config( E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 443, in get_dataloader_from_config E stderr: dataloader = get_dataloader( E stderr: File "/mnt/nvme0/code/huggingface/m4-master-6/m4/training/dataset.py", line 264, in get_dataloader E stderr: is_pmd = "meta" in hf_dataset[0] and "source" in hf_dataset[0] E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/arrow_dataset.py", line 2601, in __getitem__ E stderr: return self._getitem( E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/arrow_dataset.py", line 2586, in _getitem E stderr: formatted_output = format_table( E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 634, in format_table E stderr: return formatter(pa_table, query_type=query_type) E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 406, in __call__ E stderr: return self.format_row(pa_table) E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 442, in format_row E stderr: row = self.python_features_decoder.decode_row(row) E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/formatting/formatting.py", line 225, in decode_row E stderr: return self.features.decode_example(row) if self.features else row E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1846, in decode_example E stderr: return { E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1847, in <dictcomp> E stderr: column_name: decode_nested_example(feature, value, token_per_repo_id=token_per_repo_id) E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1304, in decode_nested_example E stderr: return decode_nested_example([schema.feature], obj) E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1296, in decode_nested_example E stderr: if decode_nested_example(sub_schema, first_elmt) != first_elmt: E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/features.py", line 1309, in decode_nested_example E stderr: return schema.decode_example(obj, token_per_repo_id=token_per_repo_id) E stderr: File "/mnt/nvme0/code/huggingface/datasets-master/src/datasets/features/image.py", line 144, in decode_example E stderr: image = PIL.Image.open(path) E stderr: File "/home/stas/anaconda3/envs/py38-pt113/lib/python3.8/site-packages/PIL/Image.py", line 3092, in open E stderr: fp = builtins.open(filename, "rb") E stderr: FileNotFoundError: [Errno 2] No such file or directory: '/mnt/nvme0/code/data/cache/huggingface/datasets/downloads/extracted/134227b9b94c4eccf19b205bf3021d4492d0227b9be6c2ddb6bf517d8d55a8cb/data/101/images_01.jpg' ``` Only if I wipe out the cached dir and rebuild then it starts working as `download/extracted` is back again with extracted files. ``` rm -r ~/.cache/huggingface/datasets/HuggingFaceM4___general-pmd-synthetic-testing python -c 'import sys; from datasets import load_dataset; ds=load_dataset(sys.argv[1])' HuggingFaceM4/general-pmd-synthetic-testing ``` I think there are 2 issues here: 1. why does it still rely on extracted files after `arrow` files were printed - did I do something incorrectly when creating this dataset? 2. why doesn't the dataset know that it has been gutted and loads just fine? If it has a dependency on `download/extracted` then `load_dataset` should check if it's there and fail or force rebuilding. I am sure this could be a very expensive operation, so probably really solving #1 will not require this check. and this second item is probably an overkill. Other than perhaps if it had an optional `check_consistency` flag to do that. ### Environment info datasets@main
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1,552,890,419
I_kwDODunzps5cjzoz
5,454
Save and resume the state of a DataLoader
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[ "Something that'd be nice to have is \"manual update of state\". One of the learning from training LLMs is the ability to skip some batches whenever we notice huge spike might be handy.", "Your outline spec is very sound and clear, @lhoestq - thank you!\r\n\r\n@thomasw21, indeed that would be a wonderful extra feature. In Megatron-Deepspeed we manually drained the dataloader for the range we wanted. I wasn't very satisfied with the way we did it, since its behavior would change if you were to do multiple range skips. I think it should remember all the ranges it skipped and not just skip the last range - since otherwise the data is inconsistent (but we probably should discuss this in a separate issue not to derail this much bigger one)." ]
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It would be nice when using `datasets` with a PyTorch DataLoader to be able to resume a training from a DataLoader state (e.g. to resume a training that crashed) What I have in mind (but lmk if you have other ideas or comments): For map-style datasets, this requires to have a PyTorch Sampler state that can be saved and reloaded per node and worker. For iterable datasets, this requires to save the state of the dataset iterator, which includes: - the current shard idx and row position in the current shard - the epoch number - the rng state - the shuffle buffer Right now you can already resume the data loading of an iterable dataset by using `IterableDataset.skip` but it takes a lot of time because it re-iterates on all the past data until it reaches the resuming point. cc @stas00 @sgugger
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ImageFolder BadZipFile: Bad offset for central directory
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[ "Hi ! Could you share the full stack trace ? Which dataset did you try to load ?", "The `BadZipFile` error means the ZIP file is corrupted, so I'm closing this issue as it's not directly related to `datasets`." ]
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### Describe the bug I'm getting the following exception: ``` lib/python3.10/zipfile.py:1353 in _RealGetContents │ │ │ │ 1350 │ │ # self.start_dir: Position of start of central directory │ │ 1351 │ │ self.start_dir = offset_cd + concat │ │ 1352 │ │ if self.start_dir < 0: │ │ ❱ 1353 │ │ │ raise BadZipFile("Bad offset for central directory") │ │ 1354 │ │ fp.seek(self.start_dir, 0) │ │ 1355 │ │ data = fp.read(size_cd) │ │ 1356 │ │ fp = io.BytesIO(data) │ ╰──────────────────────────────────────────────────────────────────────────────────────────────────╯ BadZipFile: Bad offset for central directory Extracting data files: 35%|█████████████████▊ | 38572/110812 [00:10<00:20, 3576.26it/s] ``` ### Steps to reproduce the bug ``` load_dataset( args.dataset_name, args.dataset_config_name, cache_dir=args.cache_dir, ), ``` ### Expected behavior loads the dataset ### Environment info datasets==2.8.0 Python 3.10.8 Linux 129-146-3-202 5.15.0-52-generic #58~20.04.1-Ubuntu SMP Thu Oct 13 13:09:46 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux
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5,450
to_tf_dataset with a TF collator causes bizarrely persistent slowdown
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[ "wtf", "Couldn't find what's causing this, this will need more investigation", "A possible hint: The function it seems to be spending a lot of time in (when iterating over the original dataset) is `_get_mp` in the PIL JPEG decoder: \r\n![image](https://user-images.githubusercontent.com/12866554/214057267-c889f05e-efaf-4036-b805-c5381fa62f4a.png)\r\n", "If \"mp\" is multiprocessing, this might suggest some kind of negative interaction between the JPEG decoder and TF's handling of processes/threads. Note that we haven't merged the parallel `to_tf_dataset` PR yet, so it's not caused by that PR!", "Update: MP isn't multiprocessing at all, it's an internal PIL method for loading metadata from JPEG files. No idea why that would be a bottleneck, but I'll see if a Python profiler can't figure out where the time is actually being spent.", "After further profiling, the slowdown is in the C methods for JPEG decoding that are included as part of PIL. Because Python profilers can't inspect inside that, I don't have any further information on which lines exactly are responsible for the slowdown or why.\r\n\r\nIn the meantime, I'm going to suggest switching from `return_tensors=\"tf\"` to `return_tensors=\"np\"` in most of our `transformers` code - this generally works better for pre-processing. Two relevant PRs are [here](https://github.com/huggingface/transformers/pull/21266) and [here](https://github.com/huggingface/notebooks/pull/308).", "Closing this issue as we've done what we can with this one! " ]
1,674,230,917,000
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MEMBER
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### Describe the bug This will make more sense if you take a look at [a Colab notebook that reproduces this issue.](https://colab.research.google.com/drive/1rxyeciQFWJTI0WrZ5aojp4Ls1ut18fNH?usp=sharing) Briefly, there are several datasets that, when you iterate over them with `to_tf_dataset` **and** a data collator that returns `tf` tensors, become very slow. We haven't been able to figure this one out - it can be intermittent, and we have no idea what could possibly cause it. The weirdest thing is that **the slowdown affects other attempts to access the underlying dataset**. If you try to iterate over the `tf.data.Dataset`, then interrupt execution, and then try to iterate over the original dataset, the original dataset is now also very slow! This is true even if the dataset format is not set to `tf` - the iteration is slow even though it's not calling TF at all! There is a simple workaround for this - we can simply get our data collators to return `np` tensors. When we do this, the bug is never triggered and everything is fine. In general, `np` is preferred for this kind of preprocessing work anyway, when the preprocessing is not going to be compiled into a pure `tf.data` pipeline! However, the issue is fascinating, and the TF team were wondering if anyone in datasets (cc @lhoestq @mariosasko) might have an idea of what could cause this. ### Steps to reproduce the bug Run the attached Colab. ### Expected behavior The slowdown should go away, or at least not persist after we stop iterating over the `tf.data.Dataset` ### Environment info The issue occurs on multiple versions of Python and TF, both on local machines and on Colab. All testing was done using the latest versions of `transformers` and `datasets` from `main`
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5,448
Support fsspec 2023.1.0 in CI
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Once we find out the root cause of: - #5445 we should revert the temporary pin on fsspec introduced by: - #5447
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CI tests are broken: AttributeError: 'mappingproxy' object has no attribute 'target'
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CI tests are broken, raising `AttributeError: 'mappingproxy' object has no attribute 'target'`. See: https://github.com/huggingface/datasets/actions/runs/3966497597/jobs/6797384185 ``` ... ERROR tests/test_streaming_download_manager.py::TestxPath::test_xpath_rglob[mock://top_level-date=2019-10-0[1-4]/*-expected_paths4] - AttributeError: 'mappingproxy' object has no attribute 'target' ===== 2076 passed, 19 skipped, 15 warnings, 47 errors in 115.54s (0:01:55) ===== ```
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info messages logged as warnings
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[ "Looks like a duplicate of https://github.com/huggingface/datasets/issues/1948. \r\n\r\nI also think these should be logged as INFO messages, but let's see what @lhoestq thinks.", "It can be considered unexpected to see a `map` function return instantaneously. The warning is here to explain this case by mentioning that the cache was used. I don't expect first time users (only seeing warnings) to guess that the cache works this way", "Oh, so it's intentional? Do all Hugging Face packages use `warning` when using cache?\r\nI guess feel free to close this issue then.", "Yes it's intentional for `map`. For `load_dataset` it's also intentional but for a different reason: it shows where in the cache the dataset is located, in case the user wants to clear the cache.", "OK I see. It's surprising to me that these are considered \"something unexpected happened\", the concept of cache is pretty common.\r\n\r\nHas a user every actually complained that they ran their code once, and it took a minute while the data downloaded, then ran their code again and it ran really fast (and completed successfully) but they were so baffled by the fact that it ran quickly, _and_ didn't set the log level to INFO, _and_ hadn't read the docs (or thought about it) to know that datasets are cached, that they logged an issue asking that this information be output as a warning every time they run their code?\r\n\r\nThat seems like a very niche scenario to cater for, given that the side effect is to flood the console with irrelevant warnings for every other user every other time they run a bit of `datasets` code. And the real world impact is that people TURN OFF warnings, which is a pretty bad habit to get into.\r\n\r\nAnyhoo, if there's no chance I'm going to change your mind, please close the issue :)", "I see your point and I'm not closed to switching to INFO, but I think those logs are important to make the library less opaque. I also just checked `transformers` scripts and they default to INFO which is nice. However for colab users the default is still WARNING iirc, and it counts as one of the main env where `datasets` is used.\r\n\r\nWe also use progress bars a lot in `datasets`, that are shown if the logger is at the WARNING level. But we offer a function to disable the progress bars if necessary.", "These kinds of messages are logged as INFO in Transformers, so we should probably be consistent with them" ]
1,674,177,558,000
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### Describe the bug Code in `datasets` is using `logger.warning` when it should be using `logger.info`. Some of these are probably a matter of opinion, but I think anything starting with `logger.warning(f"Loading chached` clearly falls into the info category. Definitions from the Python docs for reference: * INFO: Confirmation that things are working as expected. * WARNING: An indication that something unexpected happened, or indicative of some problem in the near future (e.g. ‘disk space low’). The software is still working as expected. In theory, a user should be able to resolve things such that there are no warnings. ### Steps to reproduce the bug Load any dataset that's already cached. ### Expected behavior No output when log level is at the default WARNING level. ### Environment info - `datasets` version: 2.8.0 - Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31 - Python version: 3.10.8 - PyArrow version: 9.0.0 - Pandas version: 1.5.2
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OneDrive Integrations with HF Datasets
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[ "Hi! \r\n\r\nWe use [`fsspec`](https://github.com/fsspec/filesystem_spec) to integrate with storage providers. You can find more info (and the usage examples) in [our docs](https://huggingface.co/docs/datasets/v2.8.0/filesystems#download-and-prepare-a-dataset-into-a-cloud-storage).\r\n\r\n[`gdrivefs`](https://github.com/fsspec/gdrivefs) makes it possible to use Google Drive as a storage service in Datasets, but this is not the case for OneDrive, since its[ Python SDK](https://github.com/OneDrive/onedrive-sdk-python) is not integrated with `fsspec`. Can you please request the integration with `fsspec` in their repo to address this limitation?", "I'm closing this issue as implementing a fsspec-compliant OneDrive filesystem is not our responsibility." ]
1,674,169,928,000
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### Feature request First of all , I would like to thank all community who are developed DataSet storage and make it free available How to integrate our Onedrive account or any other possible storage clouds (like google drive,...) with the **HF** datasets section. For example, if I have **50GB** on my **Onedrive** account and I want to move between drive and Hugging face repo or vis versa ### Motivation make the dataset section more flexible with other possible storage like the integration between Google Collab and Google drive the storage ### Your contribution Can be done using Hugging face CLI
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[dataset request] Add Common Voice 12.0
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[ "@polinaeterna any tentative date on when the Common Voice 12.0 dataset will be added ?" ]
1,674,047,225,000
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### Feature request Please add the common voice 12_0 datasets. Apart from English, a significant amount of audio-data has been added to the other minor-language datasets. ### Motivation The dataset link: https://commonvoice.mozilla.org/en/datasets
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5,437
Can't load png dataset with 4 channel (RGBA)
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[ "Hi! Can you please share the directory structure of your image folder and the `load_dataset` call? We decode images with Pillow, and Pillow supports RGBA PNGs, so this shouldn't be a problem.\r\n\r\n", "> Hi! Can you please share the directory structure of your image folder and the `load_dataset` call? We decode images with Pillow, and Pillow supports RGBA PNGs, so this shouldn't be a problem.\n> \n> \n\nI have only 1 folder that I use in the load_dataset function with the name \"IMGDATA\" and all my 9000 images are located in this folder.\n`\nfrom datasets import load_dataset\n\ndataset = load_dataset(\"IMGDATA\")\n`\nAt the same time, using another data set with images consisting of 3 RGB channels, everything works", "Okay, I figured out what was wrong. When uploading my dataset via Google Drive, the images broke and Pillow couldn't open them. As a result, I solved the problem by downloading the ZIP archive" ]
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I try to create dataset which contains about 9000 png images 64x64 in size, and they are all 4-channel (RGBA). When trying to use load_dataset() then a dataset is created from only 2 images. What exactly interferes I can not understand.![Screenshot_20230117_212213.jpg](https://user-images.githubusercontent.com/41611046/212980147-9aa68e30-76e9-4b61-a937-c2fdabd56564.jpg)
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Wrong statement in "Load a Dataset in Streaming mode" leads to data leakage
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[ "Just for your information, Tensorflow confirmed this issue [here.](https://github.com/tensorflow/tensorflow/issues/59279)", "Thanks for reporting, @HaoyuYang59.\r\n\r\nPlease note that these are different \"dataset\" objects: our docs refer to Hugging Face `datasets.Dataset` and not to TensorFlow `tf.data.Dataset`.\r\n\r\nOur `datasets.Dataset.shuffle` method does not have a `reshuffle_each_iteration` argument. Therefore, I would say the statement in our docs is True because they refer to `datasets.Dataset.shuffle`, `datasets.Dataset.skip` and `datasets.Dataset.take`.\r\n\r\nI think this issue is restricted to TensorFlow dataset, and this would be addressed by them in the issue you opened in their repo: https://github.com/tensorflow/tensorflow/issues/59279", "Also note that you are referring to an outdated documentation page: datasets 1.10.2 version\r\n\r\nCurrent datasets version is 2.8.0 and the corresponding documentation page is: https://huggingface.co/docs/datasets/stream#split-dataset", "Hi @albertvillanova thanks for your reply and your explaination here. \r\n\r\nSorry for the confusion as I'm not actually a user of your repo and I just happen to find the thread by Google (and didn't read carefully).\r\n\r\nGreat to know that and you made everything very clear now.\r\n\r\nThanks for your time and sorry for the consusion.\r\n\r\nWishing you a wonderful time. \r\n\r\nRegards" ]
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### Describe the bug In the [Split your dataset with take and skip](https://huggingface.co/docs/datasets/v1.10.2/dataset_streaming.html#split-your-dataset-with-take-and-skip), it states: > Using take (or skip) prevents future calls to shuffle from shuffling the dataset shards order, otherwise the taken examples could come from other shards. In this case it only uses the shuffle buffer. Therefore it is advised to shuffle the dataset before splitting using take or skip. See more details in the [Shuffling the dataset: shuffle](https://huggingface.co/docs/datasets/v1.10.2/dataset_streaming.html#iterable-dataset-shuffling) section.` >> \# You can also create splits from a shuffled dataset >> train_dataset = shuffled_dataset.skip(1000) >> eval_dataset = shuffled_dataset.take(1000) Where the shuffled dataset comes from: `shuffled_dataset = dataset.shuffle(buffer_size=10_000, seed=42)` At least in Tensorflow 2.9/2.10/2.11, [docs](https://www.tensorflow.org/api_docs/python/tf/data/Dataset#shuffle) states the `reshuffle_each_iteration` argument is `True` by default. This means the dataset would be shuffled after each epoch, and as a result **the validation data would leak into training test**. ### Steps to reproduce the bug N/A ### Expected behavior The `reshuffle_each_iteration` argument should be set to `False`. ### Environment info Tensorflow 2.9/2.10/2.11
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sample_dataset module not found
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[ "Hi! Can you describe what the actual error is?", "working on the setfit example script\r\n\r\n from setfit import SetFitModel, SetFitTrainer, sample_dataset\r\n\r\nImportError: cannot import name 'sample_dataset' from 'setfit' (C:\\Python\\Python38\\lib\\site-packages\\setfit\\__init__.py)\r\n\r\n apart from that, I also had to hack these loads to import thses modules:\r\n from datasets.load import load_dataset \r\n from datasets.arrow_dataset import Dataset\r\n from datasets.dataset_dict import DatasetDict", "Hi! This issue is related to the [SetFit](https://github.com/huggingface/setfit) project, so can you please open it there?" ]
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Support latest Docker image in CI benchmarks
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[ "Sorry, it was us:[^1] https://github.com/iterative/cml/pull/1317 & https://github.com/iterative/cml/issues/1319#issuecomment-1385599559; should be fixed with [v0.18.17](https://github.com/iterative/cml/releases/tag/v0.18.17).\r\n\r\n[^1]: More or less, see https://github.com/yargs/yargs/issues/873.", "Opened https://github.com/huggingface/datasets/pull/5436 unpinning again the container image.", "Hi @0x2b3bfa0, thanks a lot for the investigation, the context about the the root cause and for fixing it!!\r\n\r\nWe are reviewing your PR to unpin the container image." ]
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Once we find out the root cause of: - #5431 we should revert the temporary pin on the Docker image version introduced by: - #5432
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CI benchmarks are broken: Unknown arguments: runnerPath, path
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Our CI benchmarks are broken, raising `Unknown arguments` error: https://github.com/huggingface/datasets/actions/runs/3932397079/jobs/6724905161 ``` Unknown arguments: runnerPath, path ``` Stack trace: ``` 100%|██████████| 500/500 [00:01<00:00, 338.98ba/s] Updating lock file 'dvc.lock' To track the changes with git, run: git add dvc.lock To enable auto staging, run: dvc config core.autostage true Use `dvc push` to send your updates to remote storage. cml send-comment <markdown file> Global Options: --log Logging verbosity [string] [choices: "error", "warn", "info", "debug"] [default: "info"] --driver Git provider where the repository is hosted [string] [choices: "github", "gitlab", "bitbucket"] [default: infer from the environment] --repo Repository URL or slug [string] [default: infer from the environment] --driver-token, --token CI driver personal/project access token (PAT) [string] [default: infer from the environment] --help Show help [boolean] Options: --target Comment type (`commit`, `pr`, `commit/f00bar`, `pr/42`, `issue/1337`),default is automatic (`pr` but fallback to `commit`). [string] --watch Watch for changes and automatically update the comment [boolean] --publish Upload any local images found in the Markdown report [boolean] [default: true] --publish-url Self-hosted image server URL [string] [default: "https://asset.cml.dev/"] --publish-native, --native Uses driver's native capabilities to upload assets instead of CML's storage; not available on GitHub [boolean] --watermark-title Hidden comment marker (used for targeting in subsequent `cml comment update`); "{workflow}" & "{run}" are auto-replaced [string] [default: ""] Unknown arguments: runnerPath, path Error: Process completed with exit code 1. ``` Issue reported to iterative/cml: - iterative/cml#1319
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Support Apache Beam >= 2.44.0
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[ "Some of the shard files now have 0 number of rows.\r\n\r\nWe have opened an issue in the Apache Beam repo:\r\n- https://github.com/apache/beam/issues/25041" ]
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Once we find out the root cause of: - #5426 we should revert the temporary pin on apache-beam introduced by: - #5429
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Load/Save FAISS index using fsspec
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[ "Hi! Sure, feel free to submit a PR. Maybe if we want to be consistent with the existing API, it would be cleaner to directly add support for `fsspec` paths in `Dataset.load_faiss_index`/`Dataset.save_faiss_index` in the same manner as it was done in `Dataset.load_from_disk`/`Dataset.save_to_disk`.", "That's a great idea! I'll do that instead. " ]
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### Feature request From what I understand `faiss` already support this [link](https://github.com/facebookresearch/faiss/wiki/Index-IO,-cloning-and-hyper-parameter-tuning#generic-io-support) I would like to use a stream as input to `Dataset.load_faiss_index` and `Dataset.save_faiss_index`. ### Motivation In my case, I'm saving faiss index in cloud storage and use `fsspec` to load them. It would be ideal if I could send the stream directly instead of copying the file locally (or mounting the bucket) and then load the index. ### Your contribution I can submit the PR
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Unable to download dataset id_clickbait
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[ "Thanks for reporting, @ilos-vigil.\r\n\r\nWe have transferred this issue to the corresponding dataset on the Hugging Face Hub: https://huggingface.co/datasets/id_clickbait/discussions/1 " ]
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NONE
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### Describe the bug I tried to download dataset `id_clickbait`, but receive this error message. ``` FileNotFoundError: Couldn't find file at https://md-datasets-cache-zipfiles-prod.s3.eu-west-1.amazonaws.com/k42j7x2kpn-1.zip ``` When i open the link using browser, i got this XML data. ```xml <?xml version="1.0" encoding="UTF-8"?> <Error><Code>NoSuchBucket</Code><Message>The specified bucket does not exist</Message><BucketName>md-datasets-cache-zipfiles-prod</BucketName><RequestId>NVRM6VEEQD69SD00</RequestId><HostId>W/SPDxLGvlCGi0OD6d7mSDvfOAUqLAfvs9nTX50BkJrjMny+X9Jnqp/Li2lG9eTUuT4MUkAA2jjTfCrCiUmu7A==</HostId></Error> ``` ### Steps to reproduce the bug Code snippet: ``` from datasets import load_dataset load_dataset('id_clickbait', 'annotated') load_dataset('id_clickbait', 'raw') ``` Link to Kaggle notebook: https://www.kaggle.com/code/ilosvigil/bug-check-on-id-clickbait-dataset ### Expected behavior Successfully download and load `id_newspaper` dataset. ### Environment info - `datasets` version: 2.8.0 - Platform: Linux-5.15.65+-x86_64-with-debian-bullseye-sid - Python version: 3.7.12 - PyArrow version: 8.0.0 - Pandas version: 1.3.5
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CI tests are broken: SchemaInferenceError
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CI is broken, raising a `SchemaInferenceError`: see https://github.com/huggingface/datasets/actions/runs/3930901593/jobs/6721492004 ``` FAILED tests/test_beam.py::BeamBuilderTest::test_download_and_prepare_sharded - datasets.arrow_writer.SchemaInferenceError: Please pass `features` or at least one example when writing data ``` Stack trace: ``` ______________ BeamBuilderTest.test_download_and_prepare_sharded _______________ [gw1] linux -- Python 3.7.15 /opt/hostedtoolcache/Python/3.7.15/x64/bin/python self = <tests.test_beam.BeamBuilderTest testMethod=test_download_and_prepare_sharded> @require_beam def test_download_and_prepare_sharded(self): import apache_beam as beam original_write_parquet = beam.io.parquetio.WriteToParquet expected_num_examples = len(get_test_dummy_examples()) with tempfile.TemporaryDirectory() as tmp_cache_dir: builder = DummyBeamDataset(cache_dir=tmp_cache_dir, beam_runner="DirectRunner") with patch("apache_beam.io.parquetio.WriteToParquet") as write_parquet_mock: write_parquet_mock.side_effect = partial(original_write_parquet, num_shards=2) > builder.download_and_prepare() tests/test_beam.py:97: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/datasets/builder.py:864: in download_and_prepare **download_and_prepare_kwargs, /opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/datasets/builder.py:1976: in _download_and_prepare num_examples, num_bytes = beam_writer.finalize(metrics.query(m_filter)) /opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/datasets/arrow_writer.py:694: in finalize shard_num_bytes, _ = parquet_to_arrow(source, destination) /opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/datasets/arrow_writer.py:740: in parquet_to_arrow num_bytes, num_examples = writer.finalize() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <datasets.arrow_writer.ArrowWriter object at 0x7f6dcbb3e810> close_stream = True def finalize(self, close_stream=True): self.write_rows_on_file() # In case current_examples < writer_batch_size, but user uses finalize() if self._check_duplicates: self.check_duplicate_keys() # Re-intializing to empty list for next batch self.hkey_record = [] self.write_examples_on_file() # If schema is known, infer features even if no examples were written if self.pa_writer is None and self.schema: self._build_writer(self.schema) if self.pa_writer is not None: self.pa_writer.close() self.pa_writer = None if close_stream: self.stream.close() else: if close_stream: self.stream.close() > raise SchemaInferenceError("Please pass `features` or at least one example when writing data") E datasets.arrow_writer.SchemaInferenceError: Please pass `features` or at least one example when writing data /opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/datasets/arrow_writer.py:593: SchemaInferenceError ```
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Sort on multiple keys with datasets.Dataset.sort()
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[ "Hi! \r\n\r\n`Dataset.sort` calls `df.sort_values` internally, and `df.sort_values` brings all the \"sort\" columns in memory, so sorting on multiple keys could be very expensive. This makes me think that maybe we can replace `df.sort_values` with `pyarrow.compute.sort_indices` - the latter can also sort on multiple keys and currently loads the data into memory; however, there is a plan to eventually implement \"memory-map\" friendly kernels for the Arrow compute ops (using the Acero execution engine). \r\n\r\nSo to address this issue, you should replace `df.sort_values` with `pyarrow.compute.sort_indices` in `Dataset.sort` and adjust the signature of this function (deprecate the `kind` parameter, etc.).\r\n\r\nPS: Feel free to ping us if you need some additional help/pointers", "@mariosasko If I understand the code right, using `pyarrow.compute.sort_indices` would also require changes to the `select` method if it is meant to sort multiple keys. That's because `select` only accepts 1D input for `indices`, not an iterable or similar which would be required for multiple keys unless you want some looping over selects. Doesn't seem that straight-forward but I might be missing something here... ", "@MichlF No, it doesn't require modifying select because sorting on multiple keys also returns a 1D array.\r\n\r\nIt's easier to understand with an example:\r\n```python\r\n>>> import pyarrow as pa\r\n>>> import pyarrow.compute as pc\r\n>>> table = pa.table({\r\n... \"name\": [\"John\", \"Eve\", \"Peter\", \"John\"],\r\n... \"surname\": [\"Johnson\", \"Smith\", \"Smith\", \"Doe\"],\r\n... \"age\": [20, 40, 30, 50],\r\n... })\r\n>>> indices = pc.sort_indices(table, sort_keys=[(\"name\", \"ascending\"), (\"surname\", \"ascending\")])\r\n>>> print(indices)\r\n[\r\n 1,\r\n 3,\r\n 0,\r\n 2\r\n]\r\n```\r\n\r\n", "Thanks for clarifying.\r\nI can prepare a PR to address this issue. This would be my first PR here so I have a few maybe silly questions but:\r\n- What is the preferred input type of `sort_keys` for the sort method? A sequence with name, order tuples like pyarrow's `sort_indices` requires?\r\n- What about backwards compatability: is it supposed to also accept the old way of calling sort() or should both `column` and `kind` be deprecated?\r\n- If `sort_keys` is provided in the same format as for pyarrow's `sort_indices` - i.e. along with order for each column -, `reverse` doesn't make much sense either and should be deprecated as well I assume.", "I think we can have the following signature:\r\n```python\r\ndef sort(\r\n self,\r\n column_names: Union[str, Sequence[str]],\r\n reverse: Union[bool, Sequence[bool]] = False,\r\n kind=\"deprecated\",\r\n null_placement: str = \"last\",\r\n keep_in_memory: bool = False,\r\n load_from_cache_file: bool = True,\r\n indices_cache_file_name: Optional[str] = None,\r\n writer_batch_size: Optional[int] = 1000,\r\n new_fingerprint: Optional[str] = None,\r\n ) -> \"Dataset\":\r\n``` \r\n\r\nSo we should:\r\n* rename`column` to `column_names`. `column` is a positional argument, so it's OK to rename it (not marked as positional-only with \"/\", but still should be fine)\r\n* deprecate `kind`\r\n* keep `reverse` instead of introducing `sort_keys`, but we should allow passing a list of booleans that defines the sort order of each column from `column_names` to it (`reverse = False` would be equal to `[False] * len(column_names)` and `reverse = True` to `[True] * len(column_names)`)", "I am pretty much done with the PR. Just one clarification: `Sequence` in `arrow_dataset.py` is a custom dataclass from `features.py` instead of the `type.hinting` class `Sequence` from Python. Do you suggest using that custom `Sequence` class somehow ? Otherwise signature currently reads instead:\r\n```Python\r\n def sort(\r\n self,\r\n column_names: Union[str, List[str]],\r\n reverse: Union[bool, List[bool]] = False,\r\n kind = \"deprecated\",\r\n null_placement: str = \"last\",\r\n keep_in_memory: bool = False,\r\n load_from_cache_file: bool = True,\r\n indices_cache_file_name: Optional[str] = None,\r\n writer_batch_size: Optional[int] = 1000,\r\n new_fingerprint: Optional[str] = None,\r\n )\r\n```\r\n\r\nAlso, to maintain backwards compatibility, I added conditionals for `null_placement`, because pyarrow's `null_placement` only accepts `at_start` and `at_end`, and not `last` and `first`.\r\nIf that is all good, I think I can open the PR.", "I meant `typing.Sequence` (`datasets.Sequence` is a feature type). \r\n\r\nRegarding `null_placement`, I think we can support both `at_start` and `at_end`, and `last` and `first` (for backward compatibility; convert internally to `at_end` and `at_start` respectively).", "> I meant typing.Sequence (datasets.Sequence is a feature type).\r\n\r\nSorry, I actually meant `typing.Sequence` and not `type.hinting`. However, the issue is still that `dataset.Sequence` is imported in `arrow_dataset.py` so I cannot import and use `typing.Sequence` for the `sort`'s signature without overwriting the `dataset.Sequence` import. The latter is used in the `align_labels_with_mapping` method so it's a necessary import for `arrow_dataset.py`. \r\nTo import `typing.Sequence` as something else than `Sequence` to avoid overwriting may only be confusing and doesn't seem good practice!? The other solution is to keep `List` type hinting as in the signature I posted in my previous post but this excludes other Sequence types and may cause problems further down the line.\r\nPlease advise,\r\nThanks for all the clarifications!", "You can avoid the name collision by renaming `typing.Sequence` to `Sequence_` when importing:\r\n```python\r\nfrom typing import Sequence as Sequence_\r\n```", "Resolved via #5502 " ]
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### Feature request From discussion on forum: https://discuss.huggingface.co/t/datasets-dataset-sort-does-not-preserve-ordering/29065/1 `sort()` does not preserve ordering, and it does not support sorting on multiple columns, nor a key function. The suggested solution: > ... having something similar to pandas and be able to specify multiple columns for sorting. We’re already using pandas under the hood to do the sorting in datasets. The suggested workaround: > convert your dataset to pandas and use `df.sort_values()` ### Motivation Preserved ordering when sorting is very handy when one needs to sort on multiple columns, A and B, so that e.g. whenever A is equal for two or more rows, B is kept sorted. Having a parameter to do this in 🤗datasets would be cleaner than going through pandas and back, and it wouldn't add much complexity to the library. Alternatives: - the possibility to specify multiple keys to sort by with decreasing priority (suggested solution), - the ability to provide a key function for sorting, so that one can manually specify the sorting criteria. ### Your contribution I'll be happy to contribute by submitting a PR. Will get documented on `CONTRIBUTING.MD`. Would love to get thoughts on this, if anyone has anything to add.
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When applying `ReadInstruction` to custom load it's not DatasetDict but list of Dataset?
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[ "Hi! You can get a `DatasetDict` if you pass a dictionary with read instructions as follows:\r\n```python\r\ninstructions = [\r\n ReadInstruction(split_name=\"train\", from_=0, to=10, unit='%', rounding='closest'),\r\n ReadInstruction(split_name=\"dev\", from_=0, to=10, unit='%', rounding='closest'),\r\n ReadInstruction(split_name=\"test\", from_=0, to=5, unit='%', rounding='closest')\r\n]\r\n\r\ndataset = load_dataset('csv', data_dir=\"data/\", data_files={\"train\":\"train.tsv\", \"dev\":\"dev.tsv\", \"test\":\"test.tsv\"}, delimiter=\"\\t\", split={inst.split_name: inst for inst in instructions})\r\n```\r\n" ]
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### Describe the bug I am loading datasets from custom `tsv` files stored locally and applying split instructions for each split. Although the ReadInstruction is being applied correctly and I was expecting it to be `DatasetDict` but instead it is a list of `Dataset`. ### Steps to reproduce the bug Steps to reproduce the behaviour: 1. Import `from datasets import load_dataset, ReadInstruction` 2. Instruction to load the dataset ``` instructions = [ ReadInstruction(split_name="train", from_=0, to=10, unit='%', rounding='closest'), ReadInstruction(split_name="dev", from_=0, to=10, unit='%', rounding='closest'), ReadInstruction(split_name="test", from_=0, to=5, unit='%', rounding='closest') ] ``` 3. Load `dataset = load_dataset('csv', data_dir="data/", data_files={"train":"train.tsv", "dev":"dev.tsv", "test":"test.tsv"}, delimiter="\t", split=instructions)` ### Expected behavior **Current behaviour** ![Screenshot from 2023-01-16 10-45-27](https://user-images.githubusercontent.com/25720695/212614754-306898d8-8c27-4475-9bb8-0321bd939561.png) : **Expected behaviour** ![Screenshot from 2023-01-16 10-45-42](https://user-images.githubusercontent.com/25720695/212614813-0d336bf7-5266-482e-bb96-ef51f64de204.png) ### Environment info ``datasets==2.8.0 `` `Python==3.8.5 ` `Platform - Ubuntu 20.04.4 LTS`
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Datasets load error for saved github issues
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[ "I can confirm that the error exists!\r\nI'm trying to read 3 parquet files locally:\r\n```python\r\nfrom datasets import load_dataset, Features, Value, ClassLabel\r\n\r\nreview_dataset = load_dataset(\r\n \"parquet\",\r\n data_files={\r\n \"train\": os.path.join(sentiment_analysis_data_path, \"train.parquet\"),\r\n \"validation\": os.path.join(sentiment_analysis_data_path, \"validation.parquet\"),\r\n \"test\": os.path.join(sentiment_analysis_data_path, \"test.parquet\"),\r\n },\r\n)\r\n```\r\n\r\nBut you can fix it, by specifying `features` for `load_dataset()` function like this:\r\n```python\r\nfrom datasets import load_dataset, Features, Value, ClassLabel\r\n\r\nfeatures = Features(\r\n {\r\n \"label\": ClassLabel(\r\n num_classes=3,\r\n names=[\"negative\", \"neutral\", \"positive\"],\r\n ),\r\n \"text\": Value(dtype=\"string\"),\r\n }\r\n)\r\n\r\nreview_dataset = load_dataset(\r\n \"parquet\",\r\n data_files={\r\n \"train\": os.path.join(sentiment_analysis_data_path, \"train.parquet\"),\r\n \"validation\": os.path.join(sentiment_analysis_data_path, \"validation.parquet\"),\r\n \"test\": os.path.join(sentiment_analysis_data_path, \"test.parquet\"),\r\n },\r\n features=features,\r\n)\r\n\r\nprint(review_dataset)\r\n```", "@Extremesarova I think this is a different issue, but understand using features could be a work-around.\r\nIt seems the field `closed_at` is `null` in many cases.\r\n\r\nI've not found a way to specify only a single feature without (succesfully) specifiying the full and quite detailed set of expected features. Using this features set gives an error the column names don't match.\r\n`features = Features({'closed_at': Value(dtype='timestamp[s]', id=None)})`\r\n\r\n", "Found this when searching for the same error, looks like based on #3965 it's just an issue with the data. I found that changing `df = pd.DataFrame.from_records(all_issues)` to `df = pd.DataFrame.from_records(all_issues).dropna(axis=1, how='all').drop(['milestone'], axis=1)` from the fetch_issues function fixed the issue. \r\nThe \"milestone\" column seemed to be problematic (only ~50 non null rows) and dropped any columns that were all null as well just in case." ]
1,673,717,378,000
1,682,119,313,000
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### Describe the bug Loading a previously downloaded & saved dataset as described in the HuggingFace course: issues_dataset = load_dataset("json", data_files="issues/datasets-issues.jsonl", split="train") Gives this error: datasets.builder.DatasetGenerationError: An error occurred while generating the dataset A work-around I found was to use streaming. ### Steps to reproduce the bug Reproduce by executing the code provided: https://huggingface.co/course/chapter5/5?fw=pt From the heading: 'let’s create a function that can download all the issues from a GitHub repository' ### Expected behavior No error ### Environment info Datasets version 2.8.0. Note that version 2.6.1 gives the same error (related to null timestamp). **[EDIT]** This is the complete error trace confirming the issue is related to the timestamp (`Couldn't cast array of type timestamp[s] to null`) ``` Using custom data configuration default-950028611d2860c8 Downloading and preparing dataset json/default to [...]/.cache/huggingface/datasets/json/default-950028611d2860c8/0.0.0/0f7e3662623656454fcd2b650f34e886a7db4b9104504885bd462096cc7a9f51... Downloading data files: 100%|██████████| 1/1 [00:00<?, ?it/s] Extracting data files: 100%|██████████| 1/1 [00:00<00:00, 500.63it/s] Generating train split: 2619 examples [00:00, 7155.72 examples/s]Traceback (most recent call last): File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\builder.py", line 1831, in _prepare_split_single writer.write_table(table) File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\arrow_writer.py", line 567, in write_table pa_table = table_cast(pa_table, self._schema) File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 2282, in table_cast return cast_table_to_schema(table, schema) File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 2241, in cast_table_to_schema arrays = [cast_array_to_feature(table[name], feature) for name, feature in features.items()] File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 2241, in <listcomp> arrays = [cast_array_to_feature(table[name], feature) for name, feature in features.items()] File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 1807, in wrapper return pa.chunked_array([func(chunk, *args, **kwargs) for chunk in array.chunks]) File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 1807, in <listcomp> return pa.chunked_array([func(chunk, *args, **kwargs) for chunk in array.chunks]) File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 2035, in cast_array_to_feature arrays = [_c(array.field(name), subfeature) for name, subfeature in feature.items()] File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 2035, in <listcomp> arrays = [_c(array.field(name), subfeature) for name, subfeature in feature.items()] File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 1809, in wrapper return func(array, *args, **kwargs) File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 2101, in cast_array_to_feature return array_cast(array, feature(), allow_number_to_str=allow_number_to_str) File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 1809, in wrapper return func(array, *args, **kwargs) File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\table.py", line 1990, in array_cast raise TypeError(f"Couldn't cast array of type {array.type} to {pa_type}") TypeError: Couldn't cast array of type timestamp[s] to null The above exception was the direct cause of the following exception: Traceback (most recent call last): File "C:\Program Files\JetBrains\PyCharm 2022.1.3\plugins\python\helpers\pydev\pydevconsole.py", line 364, in runcode coro = func() File "<input>", line 1, in <module> File "C:\Program Files\JetBrains\PyCharm 2022.1.3\plugins\python\helpers\pydev\_pydev_bundle\pydev_umd.py", line 198, in runfile pydev_imports.execfile(filename, global_vars, local_vars) # execute the script File "C:\Program Files\JetBrains\PyCharm 2022.1.3\plugins\python\helpers\pydev\_pydev_imps\_pydev_execfile.py", line 18, in execfile exec(compile(contents+"\n", file, 'exec'), glob, loc) File "[...]\PycharmProjects\TransformersTesting\dataset_issues.py", line 20, in <module> issues_dataset = load_dataset("json", data_files="issues/datasets-issues.jsonl", split="train") File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\load.py", line 1757, in load_dataset builder_instance.download_and_prepare( File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\builder.py", line 860, in download_and_prepare self._download_and_prepare( File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\builder.py", line 953, in _download_and_prepare self._prepare_split(split_generator, **prepare_split_kwargs) File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\builder.py", line 1706, in _prepare_split for job_id, done, content in self._prepare_split_single( File "[...]\miniconda3\envs\HuggingFace\lib\site-packages\datasets\builder.py", line 1849, in _prepare_split_single raise DatasetGenerationError("An error occurred while generating the dataset") from e datasets.builder.DatasetGenerationError: An error occurred while generating the dataset Generating train split: 2619 examples [00:19, 7155.72 examples/s] ```
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Support case-insensitive Hub dataset name in load_dataset
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[ "Closing as case-insensitivity should be only for URL redirection on the Hub. In the APIs, we will only support the canonical name (https://github.com/huggingface/moon-landing/pull/2399#issuecomment-1382085611)" ]
1,673,615,227,000
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CONTRIBUTOR
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### Feature request The dataset name on the Hub is case-insensitive (see https://github.com/huggingface/moon-landing/pull/2399, internal issue), i.e., https://huggingface.co/datasets/GLUE redirects to https://huggingface.co/datasets/glue. Ideally, we could load the glue dataset using the following: ``` from datasets import load_dataset load_dataset('GLUE', 'cola') ``` It breaks because the loading script `GLUE.py` does not exist (`glue.py` should be selected instead). Minor additional comment: in other cases without a loading script, we can load the dataset, but the automatically generated config name depends on the casing: - `load_dataset('severo/danish-wit')` generates the config name `severo--danish-wit-e6fda5b070deb133`, while - `load_dataset('severo/danish-WIT')` generates the config name `severo--danish-WIT-e6fda5b070deb133` ### Motivation To follow the same UX on the Hub and in the datasets library. ### Your contribution ...
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label_column='labels' in datasets.TextClassification and 'label' or 'label_ids' in transformers.DataColator
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[ "Hi! Thanks for pointing out this inconsistency. Changing the default value at this point is probably not worth it, considering we've started discussing the state of the task API internally - we will most likely deprecate the current one and replace it with a more robust solution that relies on the `train_eval_index` field stored in the YAML section of the dataset cards." ]
1,673,602,807,000
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NONE
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### Describe the bug When preparing a dataset for a task using `datasets.TextClassification`, the output feature is named `labels`. When preparing the trainer using the `transformers.DataCollator` the default column name is `label` if binary or `label_ids` if multi-class problem. It is required to rename the column accordingly to the expected name : `label` or `label_ids` ### Steps to reproduce the bug ```python from datasets import TextClassification, AutoTokenized, DataCollatorWithPadding ds_prepared = my_dataset.prepare_for_task(TextClassification(text_column='TEXT', label_column='MY_LABEL_COLUMN_1_OR_0')) print(ds_prepared) tokenizer = AutoTokenizer.from_pretrained("distilbert-base-uncased") ds_tokenized = ds_prepared.map(lambda x: tokenizer(x['text'], truncation=True), batched=True) print(ds_tokenized) data_collator = DataCollatorWithPadding(tokenizer=tokenizer, return_tensors="tf") tf_data = model.prepare_tf_dataset(ds_tokenized, shuffle=True, batch_size=16, collate_fn=data_collator) print(tf_data) ``` ### Expected behavior Without renaming the the column, the target column is not in the final tf_data since it is not in the column name expected by the data_collator. To correct this, we have to rename the column: ```python ds_prepared = my_dataset.prepare_for_task(TextClassification(text_column='TEXT', label_column='MY_LABEL_COLUMN_1_OR_0')).rename_column('labels', 'label') ``` ### Environment info - `datasets` version: 2.8.0 - Platform: Linux-5.15.79.1-microsoft-standard-WSL2-x86_64-with-glibc2.35 - Python version: 3.10.6 - PyArrow version: 10.0.1 - Pandas version: 1.5.2 - `transformers` version: 4.26.0.dev0 - Platform: Linux-5.15.79.1-microsoft-standard-WSL2-x86_64-with-glibc2.35 - Python version: 3.10.6 - Huggingface_hub version: 0.11.1 - PyTorch version (GPU?): not installed (NA) - Tensorflow version (GPU?): 2.11.0 (True) - Flax version (CPU?/GPU?/TPU?): not installed (NA) - Jax version: not installed - JaxLib version: not installed - Using GPU in script?: <fill in> - Using distributed or parallel set-up in script?: <fill in>
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Add ProgressBar for `to_parquet`
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[ "Thanks for your proposal, @zanussbaum. Yes, I agree that would definitely be a nice feature to have!", "@albertvillanova I’m happy to make a quick PR for the feature! let me know ", "That would be awesome ! You can comment `#self-assign` to assign you to this issue and open a PR :) Will be happy to review", "Closing as this has been merged @lhoestq " ]
1,673,499,980,000
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CONTRIBUTOR
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### Feature request Add a progress bar for `Dataset.to_parquet`, similar to how `to_json` works. ### Motivation It's a bit frustrating to not know how long a dataset will take to write to file and if it's stuck or not without a progress bar ### Your contribution Sure I can help if needed
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RuntimeError: Sharding is ambiguous for this dataset
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### Describe the bug When loading some datasets, a RuntimeError is raised. For example, for "ami" dataset: https://huggingface.co/datasets/ami/discussions/3 ``` .../huggingface/datasets/src/datasets/builder.py in _prepare_split(self, split_generator, check_duplicate_keys, file_format, num_proc, max_shard_size) 1415 fpath = path_join(self._output_dir, fname) 1416 -> 1417 num_input_shards = _number_of_shards_in_gen_kwargs(split_generator.gen_kwargs) 1418 if num_input_shards <= 1 and num_proc is not None: 1419 logger.warning( .../huggingface/datasets/src/datasets/utils/sharding.py in _number_of_shards_in_gen_kwargs(gen_kwargs) 10 lists_lengths = {key: len(value) for key, value in gen_kwargs.items() if isinstance(value, list)} 11 if len(set(lists_lengths.values())) > 1: ---> 12 raise RuntimeError( 13 ( 14 "Sharding is ambiguous for this dataset: " RuntimeError: Sharding is ambiguous for this dataset: we found several data sources lists of different lengths, and we don't know over which list we should parallelize: - key samples_paths has length 6 - key ids has length 7 - key verification_ids has length 6 To fix this, check the 'gen_kwargs' and make sure to use lists only for data sources, and use tuples otherwise. In the end there should only be one single list, or several lists with the same length. ``` This behavior was introduced when implementing multiprocessing by PR: - #5107 ### Steps to reproduce the bug ```python ds = load_dataset("ami", "microphone-single", split="train", revision="2d7620bb7c3f1aab9f329615c3bdb598069d907a") ``` ### Expected behavior No error raised. ### Environment info Since datasets 2.7.0
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Sharding error with Multilingual LibriSpeech
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[ "Thanks for reporting, @Nithin-Holla.\r\n\r\nThis is a known issue for multiple datasets and we are investigating it:\r\n- See e.g.: https://huggingface.co/datasets/ami/discussions/3", "Main issue:\r\n- #5415", "@albertvillanova Thanks! As a workaround for now, can I use the dataset in streaming mode?", "Yes, @Nithin-Holla, in the meantime you can use this dataset in streaming mode." ]
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### Describe the bug Loading the German Multilingual LibriSpeech dataset results in a RuntimeError regarding sharding with the following stacktrace: ``` Downloading and preparing dataset multilingual_librispeech/german to /home/nithin/datadrive/cache/huggingface/datasets/facebook___multilingual_librispeech/german/2.1.0/1904af50f57a5c370c9364cc337699cfe496d4e9edcae6648a96be23086362d0... Downloading data files: 100% 3/3 [00:00<00:00, 107.23it/s] Downloading data files: 100% 1/1 [00:00<00:00, 35.08it/s] Downloading data files: 100% 6/6 [00:00<00:00, 303.36it/s] Downloading data files: 100% 3/3 [00:00<00:00, 130.37it/s] Downloading data files: 100% 1049/1049 [00:00<00:00, 4491.40it/s] Downloading data files: 100% 37/37 [00:00<00:00, 1096.78it/s] Downloading data files: 100% 40/40 [00:00<00:00, 1003.93it/s] Extracting data files: 100% 3/3 [00:11<00:00, 2.62s/it] Generating train split: 469942/0 [34:13<00:00, 273.21 examples/s] Output exceeds the size limit. Open the full output data in a text editor --------------------------------------------------------------------------- RuntimeError Traceback (most recent call last) <ipython-input-14-74fa6d092bdc> in <module> ----> 1 mls = load_dataset(MLS_DATASET, 2 LANGUAGE, 3 cache_dir="~/datadrive/cache/huggingface/datasets", 4 ignore_verifications=True) /anaconda/envs/py38_default/lib/python3.8/site-packages/datasets/load.py in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, revision, use_auth_token, task, streaming, num_proc, **config_kwargs) 1755 1756 # Download and prepare data -> 1757 builder_instance.download_and_prepare( 1758 download_config=download_config, 1759 download_mode=download_mode, /anaconda/envs/py38_default/lib/python3.8/site-packages/datasets/builder.py in download_and_prepare(self, output_dir, download_config, download_mode, ignore_verifications, try_from_hf_gcs, dl_manager, base_path, use_auth_token, file_format, max_shard_size, num_proc, storage_options, **download_and_prepare_kwargs) 858 if num_proc is not None: 859 prepare_split_kwargs["num_proc"] = num_proc --> 860 self._download_and_prepare( 861 dl_manager=dl_manager, 862 verify_infos=verify_infos, /anaconda/envs/py38_default/lib/python3.8/site-packages/datasets/builder.py in _download_and_prepare(self, dl_manager, verify_infos, **prepare_splits_kwargs) 1609 1610 def _download_and_prepare(self, dl_manager, verify_infos, **prepare_splits_kwargs): ... RuntimeError: Sharding is ambiguous for this dataset: we found several data sources lists of different lengths, and we don't know over which list we should parallelize: - key audio_archives has length 1049 - key local_extracted_archive has length 1049 - key limited_ids_paths has length 1 To fix this, check the 'gen_kwargs' and make sure to use lists only for data sources, and use tuples otherwise. In the end there should only be one single list, or several lists with the same length. ``` ### Steps to reproduce the bug Here is the code to reproduce it: ```python from datasets import load_dataset MLS_DATASET = "facebook/multilingual_librispeech" LANGUAGE = "german" mls = load_dataset(MLS_DATASET, LANGUAGE, cache_dir="~/datadrive/cache/huggingface/datasets", ignore_verifications=True) ``` ### Expected behavior The expected behaviour is that the dataset is successfully loaded. ### Environment info - `datasets` version: 2.8.0 - Platform: Linux-5.4.0-1094-azure-x86_64-with-glibc2.10 - Python version: 3.8.8 - PyArrow version: 10.0.1 - Pandas version: 1.2.4
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concatenate_datasets fails when two dataset with shards > 1 and unequal shard numbers
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[ "Hi ! Thanks for reporting :)\r\n\r\nI managed to reproduce the hub using\r\n```python\r\n\r\nfrom datasets import concatenate_datasets, Dataset, load_from_disk\r\n\r\nDataset.from_dict({\"a\": range(9)}).save_to_disk(\"tmp/ds1\")\r\nds1 = load_from_disk(\"tmp/ds1\")\r\nds1 = concatenate_datasets([ds1, ds1])\r\n\r\nDataset.from_dict({\"b\": range(6)}).save_to_disk(\"tmp/ds2\")\r\nds2 = load_from_disk(\"tmp/ds2\")\r\nds2 = concatenate_datasets([ds2, ds2, ds2])\r\n\r\nconcatenate_datasets([ds1, ds2], axis=1)\r\n```\r\nand I get\r\n```python\r\nTraceback (most recent call last): \r\n File \"test.py\", line 98, in <module>\r\n dds = concatenate_datasets([ds1, ds2], axis=1)\r\n File \"/Users/.../datasets/combine.py\", line 182, in concatenate_datasets\r\n return _concatenate_map_style_datasets(dsets, info=info, split=split, axis=axis)\r\n File \"/Users/.../datasets/arrow_dataset.py\", line 5499, in _concatenate_map_style_datasets\r\n table = concat_tables([dset._data for dset in dsets], axis=axis)\r\n File \"/Users/.../datasets/table.py\", line 1778, in concat_tables\r\n return ConcatenationTable.from_tables(tables, axis=axis)\r\n File \"/Users/.../datasets/table.py\", line 1483, in from_tables\r\n blocks = _extend_blocks(blocks, table_blocks, axis=axis)\r\n File \"/Users/.../datasets/table.py\", line 1477, in _extend_blocks\r\n result[i].extend(row_blocks)\r\nIndexError: list index out of range\r\n```\r\n\r\nIt appears to happen when the two datasets have a number of shards that is not the same" ]
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### Describe the bug When using `concatenate_datasets([dataset1, dataset2], axis = 1)` to concatenate two datasets with shards > 1, it fails: ``` File "/home/xzg/anaconda3/envs/tri-transfer/lib/python3.9/site-packages/datasets/combine.py", line 182, in concatenate_datasets return _concatenate_map_style_datasets(dsets, info=info, split=split, axis=axis) File "/home/xzg/anaconda3/envs/tri-transfer/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 5499, in _concatenate_map_style_datasets table = concat_tables([dset._data for dset in dsets], axis=axis) File "/home/xzg/anaconda3/envs/tri-transfer/lib/python3.9/site-packages/datasets/table.py", line 1778, in concat_tables return ConcatenationTable.from_tables(tables, axis=axis) File "/home/xzg/anaconda3/envs/tri-transfer/lib/python3.9/site-packages/datasets/table.py", line 1483, in from_tables blocks = _extend_blocks(blocks, table_blocks, axis=axis) File "/home/xzg/anaconda3/envs/tri-transfer/lib/python3.9/site-packages/datasets/table.py", line 1477, in _extend_blocks result[i].extend(row_blocks) IndexError: list index out of range ``` ### Steps to reproduce the bug dataset = concatenate_datasets([dataset1, dataset2], axis = 1) ### Expected behavior The datasets are correctly concatenated. ### Environment info datasets==2.8.0
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load_dataset() cannot find dataset_info.json with multiple training runs in parallel
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[ "Hi ! It fails because the dataset is already being prepared by your first run. I'd encourage you to prepare your dataset before using it for multiple trainings.\r\n\r\nYou can also specify another cache directory by passing `cache_dir=` to `load_dataset()`.", "Thank you! What do you mean by prepare it beforehand? I am unclear how to conduct dataset preparation outside of using the `load_dataset` function.", "You can have a separate script that does load_dataset + map + save_to_disk to save your prepared dataset somewhere. Then in your training script you can reload the dataset with load_from_disk", "Thank you! I believe I was running additional map steps after loading, resulting in the cache conflict. " ]
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### Describe the bug I have a custom local dataset in JSON form. I am trying to do multiple training runs in parallel. The first training run runs with no issue. However, when I start another run on another GPU, the following code throws this error. If there is a workaround to ignore the cache I think that would solve my problem too. I am using datasets version 2.8.0. ### Steps to reproduce the bug 1. Start training run of GPU 0 loading dataset from ``` load_dataset( "json", data_files=tr_dataset_path, split=f"train", download_mode="force_redownload", ) ``` 2. While GPU 0 is training, start an identical run on GPU 1. GPU 1 will produce the following error: ``` Traceback (most recent call last): File "/local-scratch1/data/mt/code/qq/train.py", line 198, in <module> main() File "/home/username/.local/lib/python3.8/site-packages/click/core.py", line 1130, in __call__ return self.main(*args, **kwargs) File "/home/username/.local/lib/python3.8/site-packages/click/core.py", line 1055, in main rv = self.invoke(ctx) File "/home/username/.local/lib/python3.8/site-packages/click/core.py", line 1404, in invoke return ctx.invoke(self.callback, **ctx.params) File "/home/username/.local/lib/python3.8/site-packages/click/core.py", line 760, in invoke return __callback(*args, **kwargs) File "/local-scratch1/data/mt/code/qq/train.py", line 113, in main load_dataset( File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/datasets/load.py", line 1734, in load_dataset builder_instance = load_dataset_builder( File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/datasets/load.py", line 1518, in load_dataset_builder builder_instance: DatasetBuilder = builder_cls( File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/datasets/builder.py", line 366, in __init__ self.info = DatasetInfo.from_directory(self._cache_dir) File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/datasets/info.py", line 313, in from_directory with fs.open(path_join(dataset_info_dir, config.DATASET_INFO_FILENAME), "r", encoding="utf-8") as f: File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/fsspec/spec.py", line 1094, in open self.open( File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/fsspec/spec.py", line 1106, in open f = self._open( File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/fsspec/implementations/local.py", line 175, in _open return LocalFileOpener(path, mode, fs=self, **kwargs) File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/fsspec/implementations/local.py", line 273, in __init__ self._open() File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/fsspec/implementations/local.py", line 278, in _open self.f = open(self.path, mode=self.mode) FileNotFoundError: [Errno 2] No such file or directory: '/home/username/.cache/huggingface/datasets/json/default-43d06a4aedb25e6d/0.0.0/0f7e3662623656454fcd2b650f34e886a7db4b9104504885bd462096cc7a9f51/dataset_info.json' ``` ### Expected behavior Expected behavior: 2nd GPU training run should run the same as 1st GPU training run. ### Environment info Copy-and-paste the text below in your GitHub issue. - `datasets` version: 2.8.0 - Platform: Linux-5.4.0-120-generic-x86_64-with-glibc2.10 - Python version: 3.8.15 - PyArrow version: 9.0.0 - Pandas version: 1.5.2
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dataset map function could not be hash properly
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[ "Hi ! On macos I tried with\r\n- py 3.9.11\r\n- datasets 2.8.0\r\n- transformers 4.25.1\r\n- dill 0.3.4\r\n\r\nand I was able to hash `prepare_dataset` correctly:\r\n```python\r\nfrom datasets.fingerprint import Hasher\r\nHasher.hash(prepare_dataset)\r\n```\r\n\r\nWhat version of transformers do you have ? Can you try to call `Hasher.hash` on the the tokenizer and the feature extractor to see which one can't be hashed ?", "Thanks for your prompt reply.\r\n\r\nI update datasets version to 2.8.0 and the warning is gong." ]
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### Describe the bug I follow the [blog post](https://huggingface.co/blog/fine-tune-whisper#building-a-demo) to finetune a Cantonese transcribe model. When using map function to prepare dataset, following warning pop out: `common_voice = common_voice.map(prepare_dataset, remove_columns=common_voice.column_names["train"], num_proc=1)` > Parameter 'function'=<function prepare_dataset at 0x000001D1D9D79A60> of the transform datasets.arrow_dataset.Dataset._map_single couldn't be hashed properly, a random hash was used instead. Make sure your transforms and parameters are serializable with pickle or dill for the dataset fingerprinting and caching to work. If you reuse this transform, the caching mechanism will consider it to be different from the previous calls and recompute everything. This warning is only showed once. Subsequent hashing failures won't be showed. I read https://github.com/huggingface/datasets/issues/4521 and https://github.com/huggingface/datasets/issues/3178 but cannot solve the issue. ### Steps to reproduce the bug ```python from datasets import load_dataset, DatasetDict common_voice = DatasetDict() common_voice["train"] = load_dataset("mozilla-foundation/common_voice_11_0", "zh-HK", split="train+validation") common_voice["test"] = load_dataset("mozilla-foundation/common_voice_11_0", "zh-HK", split="test") common_voice = common_voice.remove_columns(["accent", "age", "client_id", "down_votes", "gender", "locale", "path", "segment", "up_votes"]) from transformers import WhisperFeatureExtractor, WhisperTokenizer, WhisperProcessor feature_extractor = WhisperFeatureExtractor.from_pretrained("openai/whisper-small") tokenizer = WhisperTokenizer.from_pretrained("openai/whisper-small", language="chinese", task="transcribe") processor = WhisperProcessor.from_pretrained("openai/whisper-small", language="chinese", task="transcribe") from datasets import Audio common_voice = common_voice.cast_column("audio", Audio(sampling_rate=16000)) def prepare_dataset(batch): # load and resample audio data from 48 to 16kHz audio = batch["audio"] # compute log-Mel input features from input audio array batch["input_features"] = feature_extractor(audio["array"], sampling_rate=audio["sampling_rate"]).input_features[0] # encode target text to label ids batch["labels"] = tokenizer(batch["sentence"]).input_ids return batch common_voice = common_voice.map(prepare_dataset, remove_columns=common_voice.column_names["train"], num_proc=1) ``` ### Expected behavior Should be no warning shown. ### Environment info - `datasets` version: 2.7.0 - Platform: Windows-10-10.0.19045-SP0 - Python version: 3.9.12 - PyArrow version: 8.0.0 - Pandas version: 1.3.5 - dill version: 0.3.4 - multiprocess version: 0.70.12.2
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Datasets.from_sql() generates deprecation warning
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[ "Thanks for reporting @msummerfield. We are fixing it." ]
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### Describe the bug Calling `Datasets.from_sql()` generates a warning: `.../site-packages/datasets/builder.py:712: FutureWarning: 'use_auth_token' was deprecated in version 2.7.1 and will be removed in 3.0.0. Pass 'use_auth_token' to the initializer/'load_dataset_builder' instead.` ### Steps to reproduce the bug Any valid call to `Datasets.from_sql()` will produce the deprecation warning. ### Expected behavior No warning. The fix should be simply to remove the parameter `use_auth_token` from the call to `builder.download_and_prepare()` at line 43 of `io/sql.py` (it is set to `None` anyway, and is not needed). ### Environment info - `datasets` version: 2.8.0 - Platform: Linux-4.15.0-169-generic-x86_64-with-glibc2.27 - Python version: 3.9.15 - PyArrow version: 10.0.1 - Pandas version: 1.5.2
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[2.6.1][2.7.0] Upgrade `datasets` to fix `TypeError: can only concatenate str (not "int") to str`
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[ "I still get this error on 2.9.0\r\n<img width=\"1925\" alt=\"image\" src=\"https://user-images.githubusercontent.com/7208470/215597359-2f253c76-c472-4612-8099-d3a74d16eb29.png\">\r\n", "Hi ! I just tested locally and or colab and it works fine for 2.9 on `sst2`.\r\n\r\nAlso the code that is shown in your stack trace is not present in the 2.9 source code - so I'm wondering how you installed `datasets` that could cause this ? (you can check by searching for `[0:{label_ids[-1] + 1}]` in the [2.9 codebase](https://github.dev/huggingface/datasets/tree/b5672a956d5de864e6f5550e493527d962d6ae55) - it doesn't find anything)\r\n\r\nAnyway you can try uninstalling `datasets` and install it again", "For what it's worth, I've also gotten this error on 2.9.0, and I've tried uninstalling an reinstalling\r\n![Screenshot 2023-02-01 at 11 06 55 AM](https://user-images.githubusercontent.com/22944438/216126466-6934e8f8-0be4-41f4-9822-8436dfafd61c.png)\r\n\r\nI'm very new to this package (I was following this tutorial: https://huggingface.co/docs/transformers/training), so there's a good chance I was doing something wrong 😅 but thought I'd pass along the feedback", "@ntrpnr @mtwichel Did you install `datasets` with conda ?\r\n\r\nI suspect that `datasets` 2.9 on conda still have this issue for some reason. When I install `datasets` with `pip` I don't have this error.", "> @ntrpnr @mtwichel Did you install datasets with conda ?\r\n\r\nI did yeah, I wonder if that's the issue", "I just checked on conda at https://anaconda.org/HuggingFace/datasets/files\r\n\r\nand everything looks fine, I got\r\n```python\r\n\r\nf\"ClassLabel expected a value for all label ids [0:{int(label_ids[-1]) + 1}] but some ids are missing.\"\r\n```\r\nas expected in features.py line 1760 (notice the \"int()\") to not have the TypeError.\r\n\r\nFrom where on conda did you install `datasets` ? You should use the `HuggingFace` official channel\r\n\r\nedit: the conda-forge one [here](https://anaconda.org/conda-forge/datasets/files) seems ok as well", "Could you also try this in your notebook ? In case your python kernel doesn't match the `pip` environment in your shell\r\n```python\r\nimport datasets; datasets.__version__\r\n```\r\nand\r\n```\r\n!which python\r\n```\r\n```python\r\nimport sys; sys.executable\r\n```", "Mmmm, just a potential clue:\r\n\r\nWhere are you running your Python code? Is it the Spyder IDE?\r\n\r\nI have recently seen some users reporting conflicting Python environments while using Spyder...\r\n\r\nMaybe related:\r\n- #5487", "Other potential clue:\r\n- Had you already imported `datasets` before pip-updating it? You should first update datasets, before importing it. Otherwise, you need to restart the kernel after updating it.", "I installed `datasets` with Conda using `conda install datasets` and got this issue.\r\n\r\nThen I tried to reinstall using\r\n`\r\nconda install -c huggingface -c conda-forge datasets\r\n`\r\nThe issue is now fixed." ]
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`datasets` 2.6.1 and 2.7.0 started to stop supporting datasets like IMDB, ConLL or MNIST datasets. When loading a dataset using 2.6.1 or 2.7.0, you may this error when loading certain datasets: ```python TypeError: can only concatenate str (not "int") to str ``` This is because we started to update the metadata of those datasets to a format that is not supported in 2.6.1 and 2.7.0 This change is required or those datasets won't be supported by the Hugging Face Hub. Therefore if you encounter this error or if you're using `datasets` 2.6.1 or 2.7.0, we encourage you to update to a newer version. For example, versions 2.6.2 and 2.7.1 patch this issue. ```python pip install -U datasets ``` All the datasets affected are the ones with a ClassLabel feature type and YAML "dataset_info" metadata. More info [here](https://github.com/huggingface/datasets/issues/5275). We apologize for the inconvenience.
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size_in_bytes the same for all splits
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[ "Hi @Breakend,\r\n\r\nIndeed, the attribute `size_in_bytes` refers to the size of the entire dataset configuration, for all splits (size of downloaded files + Arrow files), not the specific split.\r\nThis is also the case for `download_size` (downloaded files) and `dataset_size` (Arrow files).\r\n\r\nThe size of the Arrow files for a specific split can be accessed: e.g. size of the \"test\" split only\r\n```python\r\nds[\"train\"].info.splits[\"test\"].num_bytes\r\n```\r\n\r\nI agree this is confusing and maybe we should improve it." ]
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### Describe the bug Hi, it looks like whenever you pull a dataset and get size_in_bytes, it returns the same size for all splits (and that size is the combined size of all splits). It seems like this shouldn't be the intended behavior since it is misleading. Here's an example: ``` >>> from datasets import load_dataset >>> x = load_dataset("glue", "wnli") Found cached dataset glue (/Users/breakend/.cache/huggingface/datasets/glue/wnli/1.0.0/dacbe3125aa31d7f70367a07a8a9e72a5a0bfeb5fc42e75c9db75b96da6053ad) 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 1097.70it/s] >>> x["train"].size_in_bytes 186159 >>> x["validation"].size_in_bytes 186159 >>> x["test"].size_in_bytes 186159 >>> ``` ### Steps to reproduce the bug ``` >>> from datasets import load_dataset >>> x = load_dataset("glue", "wnli") >>> x["train"].size_in_bytes 186159 >>> x["validation"].size_in_bytes 186159 >>> x["test"].size_in_bytes 186159 ``` ### Expected behavior The expected behavior is that it should return the separate sizes for all splits. ### Environment info - `datasets` version: 2.7.1 - Platform: macOS-12.5-arm64-arm-64bit - Python version: 3.10.8 - PyArrow version: 10.0.1 - Pandas version: 1.5.2
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5,404
Better integration of BIG-bench
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[ "Hi, I made my version : https://huggingface.co/datasets/tasksource/bigbench" ]
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### Feature request Ideally, it would be nice to have a maintained PyPI package for `bigbench`. ### Motivation We'd like to allow anyone to access, explore and use any task. ### Your contribution @lhoestq has opened an issue in their repo: - https://github.com/google/BIG-bench/issues/906
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5,402
Missing state.json when creating a cloud dataset using a dataset_builder
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[ "`load_from_disk` must be used on datasets saved using `save_to_disk`: they correspond to fully serialized datasets including their state.\r\n\r\nOn the other hand, `download_and_prepare` just downloads the raw data and convert them to arrow (or parquet if you want). We are working on allowing you to reload a dataset saved on S3 with `download_and_prepare` using `load_dataset` in #5281 \r\n\r\nFor now I'd encourage you to keep using `save_to_disk`", "Thanks, I'll follow that issue. \r\n\r\nI was following the [cloud storage](https://huggingface.co/docs/datasets/filesystems) docs section and perhaps I'm missing some part of the flow; start with `load_dataset_builder` + `download_and_prepare`. You say I need an explicit `save_to_disk` but what object needs to be saved? the builder? is that related to the other issue?", "Right now `load_dataset_builder` + `download_and_prepare` is to be used with tools like dask or spark, but `load_dataset` will support private cloud storage soon as well so you'll be able to reload the dataset with `datasets`.\r\n\r\nRight now the only function that can load a dataset from a cloud storage is `load_from_disk`, that must be used with a dataset serialized with `save_to_disk`." ]
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### Describe the bug Using `load_dataset_builder` to create a builder, run `download_and_prepare` do upload it to S3. However when trying to load it, there are missing `state.json` files. Complete example: ```python from aiobotocore.session import AioSession as Session from datasets import load_from_disk, load_datase, load_dataset_builder import s3fs storage_options = {"session": Session()} fs = s3fs.S3FileSystem(**storage_options) output_dir = "s3://bucket/imdb" builder = load_dataset_builder("imdb") builder.download_and_prepare(output_dir, storage_options=storage_options) load_from_disk(output_dir, fs=fs) # ERROR # [Errno 2] No such file or directory: '/tmp/tmpy22yys8o/bucket/imdb/state.json' ``` As a comparison, if you use the non lazy `load_dataset`, it works and the S3 folder has different structure + state.json files. Example: ```python from aiobotocore.session import AioSession as Session from datasets import load_from_disk, load_dataset, load_dataset_builder import s3fs storage_options = {"session": Session()} fs = s3fs.S3FileSystem(**storage_options) output_dir = "s3://bucket/imdb" dataset = load_dataset("imdb",) dataset.save_to_disk(output_dir, fs=fs) load_from_disk(output_dir, fs=fs) # WORKS ``` You still want the 1st option for the laziness and the parquet conversion. Thanks! ### Steps to reproduce the bug ```python from aiobotocore.session import AioSession as Session from datasets import load_from_disk, load_datase, load_dataset_builder import s3fs storage_options = {"session": Session()} fs = s3fs.S3FileSystem(**storage_options) output_dir = "s3://bucket/imdb" builder = load_dataset_builder("imdb") builder.download_and_prepare(output_dir, storage_options=storage_options) load_from_disk(output_dir, fs=fs) # ERROR # [Errno 2] No such file or directory: '/tmp/tmpy22yys8o/bucket/imdb/state.json' ``` BTW, you need the AioSession as s3fs is now based on aiobotocore, see https://github.com/fsspec/s3fs/issues/385. ### Expected behavior Expected to be able to load the dataset from S3. ### Environment info ``` s3fs 2022.11.0 s3transfer 0.6.0 datasets 2.8.0 aiobotocore 2.4.2 boto3 1.24.59 botocore 1.27.59 ``` python 3.7.15.
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Got disconnected from remote data host. Retrying in 5sec [2/20]
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### Describe the bug While trying to upload my image dataset of a CSV file type to huggingface by running the below code. The dataset consists of a little over 100k of image-caption pairs ### Steps to reproduce the bug ``` df = pd.read_csv('x.csv', encoding='utf-8-sig') features = Features({ 'link': Image(decode=True), 'caption': Value(dtype='string'), }) #make sure u r logged in to HF ds = Dataset.from_pandas(df, features=features) ds.features ds.push_to_hub("x/x") ``` I got the below error and It always stops at the same progress ``` 100%|██████████| 4/4 [23:53<00:00, 358.48s/ba] 100%|██████████| 4/4 [24:37<00:00, 369.47s/ba]%|▍ | 1/22 [00:06<02:09, 6.16s/it] 100%|██████████| 4/4 [25:00<00:00, 375.15s/ba]%|▉ | 2/22 [25:54<2:36:15, 468.80s/it] 100%|██████████| 4/4 [24:53<00:00, 373.29s/ba]%|█▎ | 3/22 [51:01<4:07:07, 780.39s/it] 100%|██████████| 4/4 [24:01<00:00, 360.34s/ba]%|█▊ | 4/22 [1:17:00<5:04:07, 1013.74s/it] 100%|██████████| 4/4 [23:59<00:00, 359.91s/ba]%|██▎ | 5/22 [1:41:07<5:24:06, 1143.90s/it] 100%|██████████| 4/4 [24:16<00:00, 364.06s/ba]%|██▋ | 6/22 [2:05:14<5:29:15, 1234.74s/it] 100%|██████████| 4/4 [25:24<00:00, 381.10s/ba]%|███▏ | 7/22 [2:29:38<5:25:52, 1303.52s/it] 100%|██████████| 4/4 [25:24<00:00, 381.24s/ba]%|███▋ | 8/22 [2:56:02<5:23:46, 1387.58s/it] 100%|██████████| 4/4 [25:08<00:00, 377.23s/ba]%|████ | 9/22 [3:22:24<5:13:17, 1445.97s/it] 100%|██████████| 4/4 [24:11<00:00, 362.87s/ba]%|████▌ | 10/22 [3:48:24<4:56:02, 1480.19s/it] 100%|██████████| 4/4 [24:44<00:00, 371.11s/ba]%|█████ | 11/22 [4:12:42<4:30:10, 1473.66s/it] 100%|██████████| 4/4 [24:35<00:00, 368.81s/ba]%|█████▍ | 12/22 [4:37:34<4:06:29, 1478.98s/it] 100%|██████████| 4/4 [24:02<00:00, 360.67s/ba]%|█████▉ | 13/22 [5:03:24<3:45:04, 1500.45s/it] 100%|██████████| 4/4 [24:07<00:00, 361.78s/ba]%|██████▎ | 14/22 [5:27:33<3:17:59, 1484.97s/it] 100%|██████████| 4/4 [23:39<00:00, 354.85s/ba]%|██████▊ | 15/22 [5:51:48<2:52:10, 1475.82s/it] Pushing dataset shards to the dataset hub: 73%|███████▎ | 16/22 [6:16:58<2:28:37, 1486.31s/it]Got disconnected from remote data host. Retrying in 5sec [1/20] Got disconnected from remote data host. Retrying in 5sec [2/20] Got disconnected from remote data host. Retrying in 5sec [3/20] Got disconnected from remote data host. Retrying in 5sec [4/20] Got disconnected from remote data host. Retrying in 5sec [5/20] Got disconnected from remote data host. Retrying in 5sec [6/20] Got disconnected from remote data host. Retrying in 5sec [7/20] Got disconnected from remote data host. Retrying in 5sec [8/20] Got disconnected from remote data host. Retrying in 5sec [9/20] ... Got disconnected from remote data host. Retrying in 5sec [19/20] Got disconnected from remote data host. Retrying in 5sec [20/20] 75%|███████▌ | 3/4 [24:47<08:15, 495.86s/ba] Pushing dataset shards to the dataset hub: 73%|███████▎ | 16/22 [6:41:46<2:30:39, 1506.65s/it] Output exceeds the size limit. Open the full output data in a text editor --------------------------------------------------------------------------- ConnectionError Traceback (most recent call last) <ipython-input-1-dbf8530779e9> in <module> 16 ds.features ``` ### Expected behavior I was trying to upload an image dataset and expected it to be fully uploaded ### Environment info - `datasets` version: 2.8.0 - Platform: Windows-10-10.0.19041-SP0 - Python version: 3.7.9 - PyArrow version: 10.0.1 - Pandas version: 1.3.5
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Unpin pydantic
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Once `pydantic` fixes their issue in their 1.10.3 version, unpin it. See issue: - #5394 See temporary fix: - #5395
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CI error: TypeError: dataclass_transform() got an unexpected keyword argument 'field_specifiers'
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[ "I still getting the same error :\r\n\r\n`python -m spacy download fr_core_news_lg\r\n`.\r\n`import spacy`", "@MFatnassi, this issue and the corresponding fix only affect our Continuous Integration testing environment.\r\n\r\nNote that `datasets` does not depend on `spacy`." ]
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### Describe the bug While installing the dependencies, the CI raises a TypeError: ``` Traceback (most recent call last): File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/runpy.py", line 183, in _run_module_as_main mod_name, mod_spec, code = _get_module_details(mod_name, _Error) File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/runpy.py", line 142, in _get_module_details return _get_module_details(pkg_main_name, error) File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/runpy.py", line 109, in _get_module_details __import__(pkg_name) File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/spacy/__init__.py", line 6, in <module> from .errors import setup_default_warnings File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/spacy/errors.py", line 2, in <module> from .compat import Literal File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/spacy/compat.py", line 3, in <module> from thinc.util import copy_array File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/thinc/__init__.py", line 5, in <module> from .config import registry File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/thinc/config.py", line 2, in <module> import confection File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/confection/__init__.py", line 10, in <module> from pydantic import BaseModel, create_model, ValidationError, Extra File "pydantic/__init__.py", line 2, in init pydantic.__init__ File "pydantic/dataclasses.py", line 46, in init pydantic.dataclasses # | None | Attribute is set to None. | File "pydantic/main.py", line 121, in init pydantic.main TypeError: dataclass_transform() got an unexpected keyword argument 'field_specifiers' ``` See: https://github.com/huggingface/datasets/actions/runs/3793736481/jobs/6466356565 ### Steps to reproduce the bug ```shell pip install .[tests,metrics-tests] python -m spacy download en_core_web_sm ``` ### Expected behavior No error. ### Environment info See: https://github.com/huggingface/datasets/actions/runs/3793736481/jobs/6466356565
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Whisper Event - RuntimeError: The size of tensor a (504) must match the size of tensor b (448) at non-singleton dimension 1 100% 1000/1000 [2:52:21<00:00, 10.34s/it]
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[ "Hey @catswithbats! Super sorry for the late reply! This is happening because there is data with label length (504) that exceeds the model's max length (448). \r\n\r\nThere are two options here:\r\n1. Increase the model's `max_length` parameter: \r\n```python\r\nmodel.config.max_length = 512\r\n```\r\n2. Filter data with labels longer than max length: https://discuss.huggingface.co/t/open-to-the-community-whisper-fine-tuning-event/26681/21?u=sanchit-gandhi\r\n\r\nNote that the datasets repo is reserved for issues directly related to the HF datasets library. Issues related to custom fine-tuning implementations are more applicable to the HF Forum: https://discuss.huggingface.co. You're more likely to get a response by posting your issue in the most applicable place and boost the chance of someone sharing a working solution!" ]
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Done in a VM with a GPU (Ubuntu) following the [Whisper Event - PYTHON](https://github.com/huggingface/community-events/tree/main/whisper-fine-tuning-event#python-script) instructions. Attempted using [RuntimeError: he size of tensor a (504) must match the size of tensor b (448) at non-singleton dimension 1 100% 1000/1000 - WEB](https://discuss.huggingface.co/t/trainer-runtimeerror-the-size-of-tensor-a-462-must-match-the-size-of-tensor-b-448-at-non-singleton-dimension-1/26010/10 ) - another person experiencing the same issue. But could not resolve the issue with the google/fleurs data. __Not clear what can be modified in the PY code to resolve the input data size mismatch, as the training data is already very small__. Tried posting on Discord, @sanchit-gandhi and @vaibhavs10. Was hoping that the event is over and some input/help is now available. [Hugging Face - whisper-small-amet](https://huggingface.co/drmeeseeks/whisper-small-amet). The paper [Robust Speech Recognition via Large-Scale Weak Supervision](https://arxiv.org/abs/2212.04356) am_et is a low resource language (Table E), with the WER results ranging from 120-229, based on model size. (Whisper small WER=120.2). # ---> Initial Training Output /usr/local/lib/python3.8/dist-packages/transformers/optimization.py:306: FutureWarning: This implementation of AdamW is deprecated and will be removed in a future version. Use the PyTorch implementation torch.optim.AdamW instead, or set `no_deprecation_warning=True` to disable this warning warnings.warn( [INFO|trainer.py:1641] 2022-12-18 05:23:28,799 >> ***** Running training ***** [INFO|trainer.py:1642] 2022-12-18 05:23:28,799 >> Num examples = 446 [INFO|trainer.py:1643] 2022-12-18 05:23:28,799 >> Num Epochs = 72 [INFO|trainer.py:1644] 2022-12-18 05:23:28,799 >> Instantaneous batch size per device = 16 [INFO|trainer.py:1645] 2022-12-18 05:23:28,799 >> Total train batch size (w. parallel, distributed & accumulation) = 32 [INFO|trainer.py:1646] 2022-12-18 05:23:28,799 >> Gradient Accumulation steps = 2 [INFO|trainer.py:1647] 2022-12-18 05:23:28,800 >> Total optimization steps = 1000 [INFO|trainer.py:1648] 2022-12-18 05:23:28,801 >> Number of trainable parameters = 241734912 # ---> Error 14% 9/65 [07:07<48:34, 52.04s/it][INFO|configuration_utils.py:523] 2022-12-18 05:03:07,941 >> Generate config GenerationConfig { "begin_suppress_tokens": [ 220, 50257 ], "bos_token_id": 50257, "decoder_start_token_id": 50258, "eos_token_id": 50257, "max_length": 448, "pad_token_id": 50257, "transformers_version": "4.26.0.dev0", "use_cache": false } Traceback (most recent call last): File "run_speech_recognition_seq2seq_streaming.py", line 629, in <module> main() File "run_speech_recognition_seq2seq_streaming.py", line 578, in main train_result = trainer.train(resume_from_checkpoint=checkpoint) File "/usr/local/lib/python3.8/dist-packages/transformers/trainer.py", line 1534, in train return inner_training_loop( File "/usr/local/lib/python3.8/dist-packages/transformers/trainer.py", line 1859, in _inner_training_loop self._maybe_log_save_evaluate(tr_loss, model, trial, epoch, ignore_keys_for_eval) File "/usr/local/lib/python3.8/dist-packages/transformers/trainer.py", line 2122, in _maybe_log_save_evaluate metrics = self.evaluate(ignore_keys=ignore_keys_for_eval) File "/usr/local/lib/python3.8/dist-packages/transformers/trainer_seq2seq.py", line 78, in evaluate return super().evaluate(eval_dataset, ignore_keys=ignore_keys, metric_key_prefix=metric_key_prefix) File "/usr/local/lib/python3.8/dist-packages/transformers/trainer.py", line 2818, in evaluate output = eval_loop( File "/usr/local/lib/python3.8/dist-packages/transformers/trainer.py", line 3000, in evaluation_loop loss, logits, labels = self.prediction_step(model, inputs, prediction_loss_only, ignore_keys=ignore_keys) File "/usr/local/lib/python3.8/dist-packages/transformers/trainer_seq2seq.py", line 213, in prediction_step outputs = model(**inputs) File "/usr/local/lib/python3.8/dist-packages/torch/nn/modules/module.py", line 1190, in _call_impl return forward_call(*input, **kwargs) File "/usr/local/lib/python3.8/dist-packages/transformers/models/whisper/modeling_whisper.py", line 1197, in forward outputs = self.model( File "/usr/local/lib/python3.8/dist-packages/torch/nn/modules/module.py", line 1190, in _call_impl return forward_call(*input, **kwargs) File "/usr/local/lib/python3.8/dist-packages/transformers/models/whisper/modeling_whisper.py", line 1066, in forward decoder_outputs = self.decoder( File "/usr/local/lib/python3.8/dist-packages/torch/nn/modules/module.py", line 1190, in _call_impl return forward_call(*input, **kwargs) File "/usr/local/lib/python3.8/dist-packages/transformers/models/whisper/modeling_whisper.py", line 873, in forward hidden_states = inputs_embeds + positions RuntimeError: The size of tensor a (504) must match the size of tensor b (448) at non-singleton dimension 1 100% 1000/1000 [2:52:21<00:00, 10.34s/it]
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5,390
Error when pushing to the CI hub
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[ "Hmmm, git bisect tells me that the behavior is the same since https://github.com/huggingface/datasets/commit/67e65c90e9490810b89ee140da11fdd13c356c9c (3 Oct), i.e. https://github.com/huggingface/datasets/pull/4926", "Maybe related to the discussions in https://github.com/huggingface/datasets/pull/5196", "Maybe the current version of moonlanding in Hub CI is the issue.\r\n\r\nI relaunched tests that were working two days ago: now they are failing. https://github.com/huggingface/datasets-server/commit/746414449cae4b311733f8a76e5b3b4ca73b38a9 for example\r\n\r\ncc @huggingface/moon-landing ", "Hi! I don't think this has anything to do with `datasets`. Hub CI seems to be the culprit - the identical failure can be found in [this](https://github.com/huggingface/datasets/pull/5389) PR (with unrelated changes) opened today.", "OK! Thanks for looking at it. Closing then." ]
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### Describe the bug Note that it's a special case where the Hub URL is "https://hub-ci.huggingface.co", which does not appear if we do the same on the Hub (https://huggingface.co). The call to `dataset.push_to_hub(` fails: ``` Pushing dataset shards to the dataset hub: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:01<00:00, 1.93s/it] Traceback (most recent call last): File "reproduce_hubci.py", line 16, in <module> dataset.push_to_hub(repo_id=repo_id, private=False, token=USER_TOKEN, embed_external_files=True) File "/home/slesage/hf/datasets/src/datasets/arrow_dataset.py", line 5025, in push_to_hub HfApi(endpoint=config.HF_ENDPOINT).upload_file( File "/home/slesage/.pyenv/versions/datasets/lib/python3.8/site-packages/huggingface_hub/hf_api.py", line 1346, in upload_file raise err File "/home/slesage/.pyenv/versions/datasets/lib/python3.8/site-packages/huggingface_hub/hf_api.py", line 1337, in upload_file r.raise_for_status() File "/home/slesage/.pyenv/versions/datasets/lib/python3.8/site-packages/requests/models.py", line 953, in raise_for_status raise HTTPError(http_error_msg, response=self) requests.exceptions.HTTPError: 400 Client Error: Bad Request for url: https://hub-ci.huggingface.co/api/datasets/__DUMMY_DATASETS_SERVER_USER__/bug-16718047265472/upload/main/README.md ``` ### Steps to reproduce the bug ```python # reproduce.py from datasets import Dataset import time USER = "__DUMMY_DATASETS_SERVER_USER__" USER_TOKEN = "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" dataset = Dataset.from_dict({"a": [1, 2, 3]}) repo_id = f"{USER}/bug-{int(time.time() * 10e3)}" dataset.push_to_hub(repo_id=repo_id, private=False, token=USER_TOKEN, embed_external_files=True) ``` ```bash $ HF_ENDPOINT="https://hub-ci.huggingface.co" python reproduce.py ``` ### Expected behavior No error and the dataset should be uploaded to the Hub with the README file (which generates the error). ### Environment info - `datasets` version: 2.8.0 - Platform: Linux-5.15.0-1026-aws-x86_64-with-glibc2.35 - Python version: 3.9.15 - PyArrow version: 7.0.0 - Pandas version: 1.5.2
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Getting Value Error while loading a dataset..
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[ "Hi! I can't reproduce this error locally (Mac) or in Colab. What version of `datasets` are you using?", "Hi [mariosasko](https://github.com/mariosasko), the datasets version is '2.8.0'.", "@valmetisrinivas you get that error because you imported `datasets` (and thus `fsspec`) before installing `zstandard`.\r\n\r\nPlease, restart your Colab runtime and execute the install commands before importing `datasets`:\r\n```python\r\n!pip install datasets\r\n!pip install zstandard\r\n\r\nfrom datasets import load_dataset\r\n\r\nds = load_dataset(\r\n \"json\",\r\n data_files=\"https://the-eye.eu/public/AI/pile_preliminary_components/FreeLaw_Opinions.jsonl.zst\",\r\n split=\"train\",\r\n streaming=True,\r\n)\r\nnext(iter(ds))\r\n```", "> @valmetisrinivas you get that error because you imported `datasets` (and thus `fsspec`) before installing `zstandard`.\r\n> \r\n> Please, restart your Colab runtime and execute the install commands before importing `datasets`:\r\n> \r\n> ```python\r\n> !pip install datasets\r\n> !pip install zstandard\r\n> \r\n> from datasets import load_dataset\r\n> \r\n> ds = load_dataset(\r\n> \"json\",\r\n> data_files=\"https://the-eye.eu/public/AI/pile_preliminary_components/FreeLaw_Opinions.jsonl.zst\",\r\n> split=\"train\",\r\n> streaming=True,\r\n> )\r\n> next(iter(ds))\r\n> ```\r\n\r\nI guess that was the problem, importing datasets before the installation of zstandard. Thank you for the feedback. " ]
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### Describe the bug I am trying to load a dataset using Hugging Face Datasets load_dataset method. I am getting the value error as show below. Can someone help with this? I am using Windows laptop and Google Colab notebook. ``` WARNING:datasets.builder:Using custom data configuration default-a1d9e8eaedd958cd --------------------------------------------------------------------------- ValueError Traceback (most recent call last) [<ipython-input-12-5b4fdcb8e6d5>](https://localhost:8080/#) in <module> 6 ) 7 ----> 8 next(iter(law_dataset_streamed)) 17 frames [/usr/local/lib/python3.8/dist-packages/fsspec/core.py](https://localhost:8080/#) in get_compression(urlpath, compression) 485 compression = infer_compression(urlpath) 486 if compression is not None and compression not in compr: --> 487 raise ValueError("Compression type %s not supported" % compression) 488 return compression 489 ValueError: Compression type zstd not supported ``` ### Steps to reproduce the bug ``` !pip install zstandard from datasets import load_dataset lds = load_dataset( "json", data_files="https://the-eye.eu/public/AI/pile_preliminary_components/FreeLaw_Opinions.jsonl.zst", split="train", streaming=True, ) ``` ### Expected behavior I expect an iterable object as the output 'lds' to be created. ### Environment info Windows laptop with Google Colab notebook
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Missing documentation page : improve-performance
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[ "Hi! Our documentation builder does not support links to sections, hence the bug. This is the link it should point to https://huggingface.co/docs/datasets/v2.8.0/en/cache#improve-performance." ]
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### Describe the bug Trying to access https://huggingface.co/docs/datasets/v2.8.0/en/package_reference/cache#improve-performance, the page is missing. The link is in here : https://huggingface.co/docs/datasets/v2.8.0/en/package_reference/loading_methods#datasets.load_dataset.keep_in_memory ### Steps to reproduce the bug Access the page and see it's missing. ### Expected behavior Not missing page ### Environment info Doesn't matter
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`max_shard_size` in `datasets.push_to_hub()` breaks with large files
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[ "Hi! \r\n\r\nThis behavior stems from the fact that we don't always embed image bytes in the underlying arrow table, which can lead to bad size estimation (we use the first 1000 table rows to [estimate](https://github.com/huggingface/datasets/blob/9a7272cd4222383a5b932b0083a4cc173fda44e8/src/datasets/arrow_dataset.py#L4627) the external file size). We plan to address this in the next major release by always embedding external bytes. In the meantime, you can either shuffle the dataset with `.shuffle().flatten_indices()` to make the estimation more precise or embed the bytes in the table like so:\r\n```python\r\nfrom datasets.table import embed_table_storage\r\nformat = ds.format\r\nds = ds.with_format(\"arrow\")\r\nds = ds.map(embed_table_storage, batched=True)\r\nds = ds.with_format(**format)\r\n...\r\nds.push_to_hub(...)\r\n```", "Embedding the bytes worked like charm. Thanks @mariosasko!" ]
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### Describe the bug `max_shard_size` parameter for `datasets.push_to_hub()` works unreliably with large files, generating shard files that are way past the specified limit. In my private dataset, which contains unprocessed images of all sizes (up to `~100MB` per file), I've encountered cases where `max_shard_size='100MB'` results in shard files that are `>2GB` in size. Setting `max_shard_size` to another value, such as `1GB` or `500MB` does not fix this problem. **The real problem is this:** When the shard file size grows too big, the entire dataset breaks because of #4721 and ultimately https://issues.apache.org/jira/browse/ARROW-5030. Since `max_shard_size` does not let one accurately control the size of the shard files, it becomes very easy to build a large dataset without any warnings that it will be broken -- even when you think you are mitigating this problem by setting `max_shard_size`. ``` File " /path/to/sd-test-suite-v1/venv/lib/site-packages/datasets/builder.py", line 1763, in _prepare_split_single for _, table in generator: File " /path/to/sd-test-suite-v1/venv/lib/site-packages/datasets/packaged_modules/parquet/parquet.py", line 69, in _generate_tables for batch_idx, record_batch in enumerate( File "pyarrow/_parquet.pyx", line 1323, in iter_batches File "pyarrow/error.pxi", line 121, in pyarrow.lib.check_status pyarrow.lib.ArrowNotImplementedError: Nested data conversions not implemented for chunked array outputs ``` ### Steps to reproduce the bug 1. Clone [example repo](https://github.com/salieri/hf-dataset-shard-size-bug) 2. Follow steps in [README.md](https://github.com/salieri/hf-dataset-shard-size-bug/blob/main/README.md) 3. After uploading the dataset, you will see that the shard file size varies between `30MB` and `200MB` -- way beyond the `max_shard_size='75MB'` limit (example: `train-00003-of-00131...` is `155MB` in [here](https://huggingface.co/datasets/slri/shard-size-test/tree/main/data)) (Note that this example repo does not generate shard files that are so large that they would trigger #4721) ### Expected behavior The shard file size should remain below or equal to `max_shard_size`. ### Environment info - `datasets` version: 2.8.0 - Platform: Linux-5.10.157-139.675.amzn2.aarch64-aarch64-with-glibc2.17 - Python version: 3.7.15 - PyArrow version: 10.0.1 - Pandas version: 1.3.5
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1,508,535,532
I_kwDODunzps5Z6mzs
5,385
Is `fs=` deprecated in `load_from_disk()` as well?
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[ "Hi! Yes, we should deprecate the `fs` param here. Would you be interested in submitting a PR? ", "> Hi! Yes, we should deprecate the `fs` param here. Would you be interested in submitting a PR?\r\n\r\nYeah I can do that sometime next week. Should the storage_options be a new arg here? I’ll look around for anywhere else where fs is an arg.", "Closed by #5393." ]
1,671,742,845,000
1,674,471,005,000
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CONTRIBUTOR
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### Describe the bug The `fs=` argument was deprecated from `Dataset.save_to_disk` and `Dataset.load_from_disk` in favor of automagically figuring it out via fsspec: https://github.com/huggingface/datasets/blob/9a7272cd4222383a5b932b0083a4cc173fda44e8/src/datasets/arrow_dataset.py#L1339-L1340 Is there a reason the same thing shouldn't also apply to `datasets.load.load_from_disk()` as well ? https://github.com/huggingface/datasets/blob/9a7272cd4222383a5b932b0083a4cc173fda44e8/src/datasets/load.py#L1779 ### Steps to reproduce the bug n/a ### Expected behavior n/a ### Environment info n/a
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1,507,293,968
I_kwDODunzps5Z13sQ
5,383
IterableDataset missing column_names, differs from Dataset interface
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[ "Another example is that `IterableDataset.map` does not have `fn_kwargs`, among other arguments. It makes it harder to convert code from Dataset to IterableDataset.", "Hi! `fn_kwargs` was added to `IterableDataset.map` in `datasets 2.5.0`, so please update your installation (`pip install -U datasets`) to use it.\r\n\r\nRegarding `column_names`, I agree we should add this property to `IterableDataset`. In the meantime, you can use `list(dataset.features.keys())` instead.", "Thanks! That's great news.\n\nOn Thu, Dec 22, 2022, 07:48 Mario Šaško ***@***.***> wrote:\n\n> Hi! fn_kwargs was added to IterableDataset.map in datasets 2.5.0, so\n> please update your installation (pip install -U datasets) to use it.\n>\n> Regarding column_names, I agree we should add this property to\n> IterableDataset. In the meantime, you can use\n> list(dataset.features.keys()) instead.\n>\n> —\n> Reply to this email directly, view it on GitHub\n> <https://github.com/huggingface/datasets/issues/5383#issuecomment-1362993633>,\n> or unsubscribe\n> <https://github.com/notifications/unsubscribe-auth/AAHD6N2EQUFEOUFDW3VHSILWORZ45ANCNFSM6AAAAAATGKWVGM>\n> .\n> You are receiving this because you authored the thread.Message ID:\n> ***@***.***>\n>\n", "I'm marking this issue as a \"good first issue\", as it makes sense to have `IterableDataset.column_names` in the API. Besides the case when `features` are `None` (e.g., `features` are `None` after `map`), in which we can also return `column_names` as `None`, adding this property should be straightforward,", "Hi @mariosasko, I can work on this if that's ok?", "Yes! I've assigned you the issue." ]
1,671,686,822,000
1,678,734,213,000
1,678,734,213,000
NONE
null
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### Describe the bug The documentation on [Stream](https://huggingface.co/docs/datasets/v1.18.2/stream.html) seems to imply that IterableDataset behaves just like a Dataset. However, examples like ``` dataset.map(augment_data, batched=True, remove_columns=dataset.column_names, ...) ``` will not work because `.column_names` does not exist on IterableDataset. I cannot find any clear explanation on why this is not available, is it an oversight? We do have `iterable_ds.features` available. ### Steps to reproduce the bug See above ### Expected behavior Dataset and IterableDataset would be expected to have the same interface, with any differences noted in the documentation. ### Environment info n/a
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1,504,498,387
I_kwDODunzps5ZrNLT
5,381
Wrong URL for the_pile dataset
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[ "Hi! This error can happen if there is a local file/folder with the same name as the requested dataset. And to avoid it, rename the local file/folder.\r\n\r\nSoon, it will be possible to explicitly request a Hub dataset as follows:https://github.com/huggingface/datasets/issues/5228#issuecomment-1313494020" ]
1,671,540,014,000
1,676,478,297,000
1,676,478,297,000
NONE
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### Describe the bug When trying to load `the_pile` dataset from the library, I get a `FileNotFound` error. ### Steps to reproduce the bug Steps to reproduce: Run: ``` from datasets import load_dataset dataset = load_dataset("the_pile") ``` I get the output: "name": "FileNotFoundError", "message": "Unable to resolve any data file that matches '['**']' at /storage/store/work/lgrinszt/memorization/the_pile with any supported extension ['csv', 'tsv', 'json', 'jsonl', 'parquet', 'txt', 'blp', 'bmp', 'dib', 'bufr', 'cur', 'pcx', 'dcx', 'dds', 'ps', 'eps', 'fit', 'fits', 'fli', 'flc', 'ftc', 'ftu', 'gbr', 'gif', 'grib', 'h5', 'hdf', 'png', 'apng', 'jp2', 'j2k', 'jpc', 'jpf', 'jpx', 'j2c', 'icns', 'ico', 'im', 'iim', 'tif', 'tiff', 'jfif', 'jpe', 'jpg', 'jpeg', 'mpg', 'mpeg', 'msp', 'pcd', 'pxr', 'pbm', 'pgm', 'ppm', 'pnm', 'psd', 'bw', 'rgb', 'rgba', 'sgi', 'ras', 'tga', 'icb', 'vda', 'vst', 'webp', 'wmf', 'emf', 'xbm', 'xpm', 'BLP', 'BMP', 'DIB', 'BUFR', 'CUR', 'PCX', 'DCX', 'DDS', 'PS', 'EPS', 'FIT', 'FITS', 'FLI', 'FLC', 'FTC', 'FTU', 'GBR', 'GIF', 'GRIB', 'H5', 'HDF', 'PNG', 'APNG', 'JP2', 'J2K', 'JPC', 'JPF', 'JPX', 'J2C', 'ICNS', 'ICO', 'IM', 'IIM', 'TIF', 'TIFF', 'JFIF', 'JPE', 'JPG', 'JPEG', 'MPG', 'MPEG', 'MSP', 'PCD', 'PXR', 'PBM', 'PGM', 'PPM', 'PNM', 'PSD', 'BW', 'RGB', 'RGBA', 'SGI', 'RAS', 'TGA', 'ICB', 'VDA', 'VST', 'WEBP', 'WMF', 'EMF', 'XBM', 'XPM', 'aiff', 'au', 'avr', 'caf', 'flac', 'htk', 'svx', 'mat4', 'mat5', 'mpc2k', 'ogg', 'paf', 'pvf', 'raw', 'rf64', 'sd2', 'sds', 'ircam', 'voc', 'w64', 'wav', 'nist', 'wavex', 'wve', 'xi', 'mp3', 'opus', 'AIFF', 'AU', 'AVR', 'CAF', 'FLAC', 'HTK', 'SVX', 'MAT4', 'MAT5', 'MPC2K', 'OGG', 'PAF', 'PVF', 'RAW', 'RF64', 'SD2', 'SDS', 'IRCAM', 'VOC', 'W64', 'WAV', 'NIST', 'WAVEX', 'WVE', 'XI', 'MP3', 'OPUS', 'zip']" ### Expected behavior `the_pile` dataset should be dowloaded. ### Environment info - `datasets` version: 2.7.1 - Platform: Linux-4.15.0-112-generic-x86_64-with-glibc2.27 - Python version: 3.10.8 - PyArrow version: 10.0.1 - Pandas version: 1.5.2
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I_kwDODunzps5Zq2JL
5,380
Improve dataset `.skip()` speed in streaming mode
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[ "Hi! I agree `skip` can be inefficient to use in the current state.\r\n\r\nTo make it fast, we could use \"statistics\" stored in Parquet metadata and read only the chunks needed to form a dataset. \r\n\r\nAnd thanks to the \"datasets-server\" project, which aims to store the Parquet versions of the Hub datasets (only the smaller datasets are covered currently), this solution can also be applied to datasets stored in formats other than Parquet. (cc @severo)", "@mariosasko do the current parquet files created by the datasets-server already have the required \"statistics\"? If not, please open an issue on https://github.com/huggingface/datasets-server with some details to make sure we implement it.", "Yes, nothing has to be changed on the datasets-server side. What I mean by \"statistics\" is that we can use the \"row_group\" metadata embedded in a Parquet file (by default) to fetch the requested rows more efficiently.", "Glad to see the feature could be of interest. \r\n\r\nI'm sure there are many possible ways to implement this feature. I don't know enough about the datasets-server, but I guess that it is not instantaneous, in the sense that user-owned private datasets might need hours or days until they are ported to the datasets-server (if at all), which could be cumbersome. Having optionally that information in the `dataset_infos.json` file would make it easier for users to control the skip process a bit.", "re: statistics:\r\n\r\n- https://arrow.apache.org/docs/python/generated/pyarrow.parquet.FileMetaData.html\r\n- https://arrow.apache.org/docs/python/generated/pyarrow.parquet.RowGroupMetaData.html\r\n\r\n```python\r\n>>> import pyarrow.parquet as pq\r\n>>> import hffs\r\n>>> fs = hffs.HfFileSystem(\"glue\", repo_type=\"dataset\", revision=\"refs/convert/parquet\")\r\n>>> metadata = pq.read_metadata(\"ax/glue-test.parquet\", filesystem=fs)\r\n>>> metadata\r\n<pyarrow._parquet.FileMetaData object at 0x7f4537cec400>\r\n created_by: parquet-cpp-arrow version 7.0.0\r\n num_columns: 4\r\n num_rows: 1104\r\n num_row_groups: 2\r\n format_version: 1.0\r\n serialized_size: 2902\r\n>>> metadata.row_group(0)\r\n<pyarrow._parquet.RowGroupMetaData object at 0x7f45564bcbd0>\r\n num_columns: 4\r\n num_rows: 1000\r\n total_byte_size: 164474\r\n>>> metadata.row_group(1)\r\n<pyarrow._parquet.RowGroupMetaData object at 0x7f455005c400>\r\n num_columns: 4\r\n num_rows: 104\r\n total_byte_size: 13064\r\n```", "> user-owned private datasets might need hours or days until they are ported to the datasets-server (if at all)\r\n\r\nprivate datasets are not supported yet (https://github.com/huggingface/datasets-server/issues/39)", "@versae `Dataset.push_to_hub` writes shards in Parquet, so this solution would also work for such datasets (immediately after the push). ", "@mariosasko that is right. However, there are still a good amount of datasets for which the shards are created manually. In our very specific case, we create medium-sized datasets (rarely over 100-200GB) of both text and audio, we prepare the shards by hand and then upload then. It would be great to have immediate access to this download skipping feature for them too.", "From looking at Arrow's source, it seems Parquet stores metadata at the end, which means one needs to iterate over a Parquet file's data before accessing its metadata. We could mimic Dask to address this \"limitation\" and write metadata in a `_metadata`/`_common_metadata` file in `to_parquet`/`push_to_hub`, which we could then use to optimize reads (if present). Plus, it's handy that PyArrow can also parse these metadata files.", "So if Parquet metadata needs to be in its own file anyway, why not implement this skipping feature by storing the example counts per shard in `dataset_infos.json`? That would allow:\r\n- Support both private and public datasets\r\n- Immediate access to the feature upon uploading of shards\r\n- Use any dataset, not only those uploaded using `.push_to_hub()`\r\n\r\nA proper Parquet metadata file could still be created and \"overwrite\" the `dataset_infos.json` info in the datasets-server." ]
1,671,535,523,000
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CONTRIBUTOR
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### Feature request Add extra information to the `dataset_infos.json` file to include the number of samples/examples in each shard, for example in a new field `num_examples` alongside `num_bytes`. The `.skip()` function could use this information to ignore the download of a shard when in streaming mode, which AFAICT it should speed up the skipping process. ### Motivation When resuming from a checkpoint after a crashed run, using `dataset.skip()` is very convenient to recover the exact state of the data and to not train again over the same examples (assuming same seed, no shuffling). However, I have noticed that for audio datasets in streaming mode this is very costly in terms of time, as shards need to be downloaded every time before skipping the right number of examples. ### Your contribution I took a look already at the code, but it seems a change like this is way deeper than I am able to manage, as it touches the library in several parts. I could give it a try but might need some guidance on the internals.
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The dataset "the_pile", subset "enron_emails" , load_dataset() failure
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[ "Thanks for reporting @shaoyuta. We are investigating it.\r\n\r\nWe are transferring the issue to \"the_pile\" Community tab on the Hub: https://huggingface.co/datasets/the_pile/discussions/4" ]
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### Describe the bug When run "datasets.load_dataset("the_pile","enron_emails")" failure ![image](https://user-images.githubusercontent.com/52023469/208565302-cfab7b89-0b97-4fa6-a5ba-c11b0b629b1a.png) ### Steps to reproduce the bug Run below code in python cli: >>> import datasets >>> datasets.load_dataset("the_pile","enron_emails") ### Expected behavior Load dataset "the_pile", "enron_emails" successfully. ### Environment info Copy-and-paste the text below in your GitHub issue. - `datasets` version: 2.7.1 - Platform: Linux-5.15.0-53-generic-x86_64-with-glibc2.35 - Python version: 3.10.6 - PyArrow version: 10.0.0 - Pandas version: 1.4.3
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