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mitsei/dlkit
dlkit/services/repository.py
Repository.use_comparative_asset_view
def use_comparative_asset_view(self): """Pass through to provider AssetLookupSession.use_comparative_asset_view""" self._object_views['asset'] = COMPARATIVE # self._get_provider_session('asset_lookup_session') # To make sure the session is tracked for session in self._get_provider_sessio...
python
def use_comparative_asset_view(self): """Pass through to provider AssetLookupSession.use_comparative_asset_view""" self._object_views['asset'] = COMPARATIVE # self._get_provider_session('asset_lookup_session') # To make sure the session is tracked for session in self._get_provider_sessio...
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Pass through to provider AssetLookupSession.use_comparative_asset_view
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/services/repository.py#L1463-L1471
mitsei/dlkit
dlkit/services/repository.py
Repository.use_plenary_asset_view
def use_plenary_asset_view(self): """Pass through to provider AssetLookupSession.use_plenary_asset_view""" self._object_views['asset'] = PLENARY # self._get_provider_session('asset_lookup_session') # To make sure the session is tracked for session in self._get_provider_sessions(): ...
python
def use_plenary_asset_view(self): """Pass through to provider AssetLookupSession.use_plenary_asset_view""" self._object_views['asset'] = PLENARY # self._get_provider_session('asset_lookup_session') # To make sure the session is tracked for session in self._get_provider_sessions(): ...
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Pass through to provider AssetLookupSession.use_plenary_asset_view
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/services/repository.py#L1473-L1481
mitsei/dlkit
dlkit/services/repository.py
Repository.use_federated_repository_view
def use_federated_repository_view(self): """Pass through to provider AssetLookupSession.use_federated_repository_view""" self._repository_view = FEDERATED # self._get_provider_session('asset_lookup_session') # To make sure the session is tracked for session in self._get_provider_sessions...
python
def use_federated_repository_view(self): """Pass through to provider AssetLookupSession.use_federated_repository_view""" self._repository_view = FEDERATED # self._get_provider_session('asset_lookup_session') # To make sure the session is tracked for session in self._get_provider_sessions...
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Pass through to provider AssetLookupSession.use_federated_repository_view
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mitsei/dlkit
dlkit/services/repository.py
Repository.use_isolated_repository_view
def use_isolated_repository_view(self): """Pass through to provider AssetLookupSession.use_isolated_repository_view""" self._repository_view = ISOLATED # self._get_provider_session('asset_lookup_session') # To make sure the session is tracked for session in self._get_provider_sessions():...
python
def use_isolated_repository_view(self): """Pass through to provider AssetLookupSession.use_isolated_repository_view""" self._repository_view = ISOLATED # self._get_provider_session('asset_lookup_session') # To make sure the session is tracked for session in self._get_provider_sessions():...
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mitsei/dlkit
dlkit/services/repository.py
Repository.get_asset_form
def get_asset_form(self, *args, **kwargs): """Pass through to provider AssetAdminSession.get_asset_form_for_update""" # Implemented from kitosid template for - # osid.resource.ResourceAdminSession.get_resource_form_for_update # This method might be a bit sketchy. Time will tell. ...
python
def get_asset_form(self, *args, **kwargs): """Pass through to provider AssetAdminSession.get_asset_form_for_update""" # Implemented from kitosid template for - # osid.resource.ResourceAdminSession.get_resource_form_for_update # This method might be a bit sketchy. Time will tell. ...
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Pass through to provider AssetAdminSession.get_asset_form_for_update
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train
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mitsei/dlkit
dlkit/services/repository.py
Repository.save_asset
def save_asset(self, asset_form, *args, **kwargs): """Pass through to provider AssetAdminSession.update_asset""" # Implemented from kitosid template for - # osid.resource.ResourceAdminSession.update_resource if asset_form.is_for_update(): return self.update_asset(asset_form, ...
python
def save_asset(self, asset_form, *args, **kwargs): """Pass through to provider AssetAdminSession.update_asset""" # Implemented from kitosid template for - # osid.resource.ResourceAdminSession.update_resource if asset_form.is_for_update(): return self.update_asset(asset_form, ...
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train
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mitsei/dlkit
dlkit/services/repository.py
Repository.use_comparative_asset_composition_view
def use_comparative_asset_composition_view(self): """Pass through to provider AssetCompositionSession.use_comparative_asset_composition_view""" self._object_views['asset_composition'] = COMPARATIVE # self._get_provider_session('asset_composition_session') # To make sure the session is tracked ...
python
def use_comparative_asset_composition_view(self): """Pass through to provider AssetCompositionSession.use_comparative_asset_composition_view""" self._object_views['asset_composition'] = COMPARATIVE # self._get_provider_session('asset_composition_session') # To make sure the session is tracked ...
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train
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mitsei/dlkit
dlkit/services/repository.py
Repository.use_plenary_asset_composition_view
def use_plenary_asset_composition_view(self): """Pass through to provider AssetCompositionSession.use_plenary_asset_composition_view""" self._object_views['asset_composition'] = PLENARY # self._get_provider_session('asset_composition_session') # To make sure the session is tracked for se...
python
def use_plenary_asset_composition_view(self): """Pass through to provider AssetCompositionSession.use_plenary_asset_composition_view""" self._object_views['asset_composition'] = PLENARY # self._get_provider_session('asset_composition_session') # To make sure the session is tracked for se...
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Pass through to provider AssetCompositionSession.use_plenary_asset_composition_view
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mitsei/dlkit
dlkit/services/repository.py
Repository.use_comparative_composition_view
def use_comparative_composition_view(self): """Pass through to provider CompositionLookupSession.use_comparative_composition_view""" self._object_views['composition'] = COMPARATIVE # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked for sessio...
python
def use_comparative_composition_view(self): """Pass through to provider CompositionLookupSession.use_comparative_composition_view""" self._object_views['composition'] = COMPARATIVE # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked for sessio...
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train
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mitsei/dlkit
dlkit/services/repository.py
Repository.use_plenary_composition_view
def use_plenary_composition_view(self): """Pass through to provider CompositionLookupSession.use_plenary_composition_view""" self._object_views['composition'] = PLENARY # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked for session in self._g...
python
def use_plenary_composition_view(self): """Pass through to provider CompositionLookupSession.use_plenary_composition_view""" self._object_views['composition'] = PLENARY # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked for session in self._g...
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Pass through to provider CompositionLookupSession.use_plenary_composition_view
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mitsei/dlkit
dlkit/services/repository.py
Repository.use_active_composition_view
def use_active_composition_view(self): """Pass through to provider CompositionLookupSession.use_active_composition_view""" self._operable_views['composition'] = ACTIVE # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked for session in self._g...
python
def use_active_composition_view(self): """Pass through to provider CompositionLookupSession.use_active_composition_view""" self._operable_views['composition'] = ACTIVE # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked for session in self._g...
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Pass through to provider CompositionLookupSession.use_active_composition_view
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mitsei/dlkit
dlkit/services/repository.py
Repository.use_any_status_composition_view
def use_any_status_composition_view(self): """Pass through to provider CompositionLookupSession.use_any_status_composition_view""" self._operable_views['composition'] = ANY_STATUS # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked for sessio...
python
def use_any_status_composition_view(self): """Pass through to provider CompositionLookupSession.use_any_status_composition_view""" self._operable_views['composition'] = ANY_STATUS # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked for sessio...
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mitsei/dlkit
dlkit/services/repository.py
Repository.use_sequestered_composition_view
def use_sequestered_composition_view(self): """Pass through to provider CompositionLookupSession.use_sequestered_composition_view""" self._containable_views['composition'] = SEQUESTERED # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked for ...
python
def use_sequestered_composition_view(self): """Pass through to provider CompositionLookupSession.use_sequestered_composition_view""" self._containable_views['composition'] = SEQUESTERED # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked for ...
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mitsei/dlkit
dlkit/services/repository.py
Repository.use_unsequestered_composition_view
def use_unsequestered_composition_view(self): """Pass through to provider CompositionLookupSession.use_unsequestered_composition_view""" self._containable_views['composition'] = UNSEQUESTERED # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked ...
python
def use_unsequestered_composition_view(self): """Pass through to provider CompositionLookupSession.use_unsequestered_composition_view""" self._containable_views['composition'] = UNSEQUESTERED # self._get_provider_session('composition_lookup_session') # To make sure the session is tracked ...
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mitsei/dlkit
dlkit/services/repository.py
Repository.get_composition_form
def get_composition_form(self, *args, **kwargs): """Pass through to provider CompositionAdminSession.get_composition_form_for_update""" # Implemented from kitosid template for - # osid.resource.ResourceAdminSession.get_resource_form_for_update # This method might be a bit sketchy. Time w...
python
def get_composition_form(self, *args, **kwargs): """Pass through to provider CompositionAdminSession.get_composition_form_for_update""" # Implemented from kitosid template for - # osid.resource.ResourceAdminSession.get_resource_form_for_update # This method might be a bit sketchy. Time w...
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mitsei/dlkit
dlkit/services/repository.py
Repository.save_composition
def save_composition(self, composition_form, *args, **kwargs): """Pass through to provider CompositionAdminSession.update_composition""" # Implemented from kitosid template for - # osid.resource.ResourceAdminSession.update_resource if composition_form.is_for_update(): return ...
python
def save_composition(self, composition_form, *args, **kwargs): """Pass through to provider CompositionAdminSession.update_composition""" # Implemented from kitosid template for - # osid.resource.ResourceAdminSession.update_resource if composition_form.is_for_update(): return ...
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biesnecker/cleveland
cleveland/actor.py
AbstractActor._run
def _run(self): '''The actor's main work loop''' while self._is_running: yield from self._task() # Signal that the loop has finished. self._run_complete.set_result(True)
python
def _run(self): '''The actor's main work loop''' while self._is_running: yield from self._task() # Signal that the loop has finished. self._run_complete.set_result(True)
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askovpen/discord_simple
discord_simple/bot.py
Bot.connect
def connect(self): """ Todo connect """ self.transport = Transport(self.token, on_connect=self.on_connect, on_message=self.on_message)
python
def connect(self): """ Todo connect """ self.transport = Transport(self.token, on_connect=self.on_connect, on_message=self.on_message)
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askovpen/discord_simple
discord_simple/bot.py
Bot.on_connect
def on_connect(self, user): """ Todo connect """ self.user = user self.logger.info("connected as %s", user) if not isinstance(self.con_connect, type(None)): self.con_connect(user)
python
def on_connect(self, user): """ Todo connect """ self.user = user self.logger.info("connected as %s", user) if not isinstance(self.con_connect, type(None)): self.con_connect(user)
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askovpen/discord_simple
discord_simple/bot.py
Bot.on_message
def on_message(self, data): """ Todo connect """ if self.user.id != data.author.id: self.logger.info("Message from %s: %s", data.author, data.content) if not isinstance(self.con_message, type(None)): self.logger.debug(type(self.con_message)) self.con_message(data)
python
def on_message(self, data): """ Todo connect """ if self.user.id != data.author.id: self.logger.info("Message from %s: %s", data.author, data.content) if not isinstance(self.con_message, type(None)): self.logger.debug(type(self.con_message)) self.con_message(data)
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askovpen/discord_simple
discord_simple/bot.py
Bot.send_message
def send_message(self, user=None, message=None,channel=None): """ Todo connect """ self.transport.send_message(user=user, message=message, channel=channel)
python
def send_message(self, user=None, message=None,channel=None): """ Todo connect """ self.transport.send_message(user=user, message=message, channel=channel)
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mitsei/dlkit
dlkit/records/assessment/fbw/assessment_part_records.py
AssessmentPartWithLearningObjectiveFormRecord._init_map
def _init_map(self): """stub""" self.my_osid_object_form._my_map['learningObjectiveId'] = \ str(self._learning_objective_id_metadata['default_id_values'][0]) self.my_osid_object_form._my_map['minimumProficiency'] = \ str(self._minimum_proficiency_metadata['default_id_valu...
python
def _init_map(self): """stub""" self.my_osid_object_form._my_map['learningObjectiveId'] = \ str(self._learning_objective_id_metadata['default_id_values'][0]) self.my_osid_object_form._my_map['minimumProficiency'] = \ str(self._minimum_proficiency_metadata['default_id_valu...
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stub
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/records/assessment/fbw/assessment_part_records.py#L43-L48
mitsei/dlkit
dlkit/records/assessment/fbw/assessment_part_records.py
AssessmentPartWithLearningObjectiveFormRecord._init_metadata
def _init_metadata(self): """stub""" self._learning_objective_id_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, 'learning_objective_id'), 'element_label': 'Learning ...
python
def _init_metadata(self): """stub""" self._learning_objective_id_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, 'learning_objective_id'), 'element_label': 'Learning ...
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stub
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/records/assessment/fbw/assessment_part_records.py#L50-L79
mitsei/dlkit
dlkit/filesystem_adapter/repository/sessions.py
AssetAdminSession._update_asset_content_filename_on_disk_to_match_id
def _update_asset_content_filename_on_disk_to_match_id(self, ac): """Because we want the asset content filename to match the ac.ident, here we manipulate the saved file on disk after creating the asset content""" def has_secondary_storage(): return 'secondary_data_store_path'...
python
def _update_asset_content_filename_on_disk_to_match_id(self, ac): """Because we want the asset content filename to match the ac.ident, here we manipulate the saved file on disk after creating the asset content""" def has_secondary_storage(): return 'secondary_data_store_path'...
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Because we want the asset content filename to match the ac.ident, here we manipulate the saved file on disk after creating the asset content
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/filesystem_adapter/repository/sessions.py#L1156-L1183
mitsei/dlkit
dlkit/filesystem_adapter/repository/sessions.py
AssetAdminSession._update_asset_content_url_to_match_id
def _update_asset_content_url_to_match_id(self, ac): """update the ac URL value to match the ident""" mgr = self._provider_session._get_provider_manager('REPOSITORY') aas = mgr.get_asset_admin_session_for_repository(self._provider_session._catalog_id, ...
python
def _update_asset_content_url_to_match_id(self, ac): """update the ac URL value to match the ident""" mgr = self._provider_session._get_provider_manager('REPOSITORY') aas = mgr.get_asset_admin_session_for_repository(self._provider_session._catalog_id, ...
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mitsei/dlkit
dlkit/filesystem_adapter/repository/sessions.py
AssetAdminSession.delete_asset_content
def delete_asset_content(self, asset_content_id=None): """Deletes content from an ``Asset``. arg: asset_content_id (osid.id.Id): the ``Id`` of the ``AssetContent`` raise: NotFound - ``asset_content_id`` is not found raise: NullArgument - ``asset_content_id`` is ``nu...
python
def delete_asset_content(self, asset_content_id=None): """Deletes content from an ``Asset``. arg: asset_content_id (osid.id.Id): the ``Id`` of the ``AssetContent`` raise: NotFound - ``asset_content_id`` is not found raise: NullArgument - ``asset_content_id`` is ``nu...
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Deletes content from an ``Asset``. arg: asset_content_id (osid.id.Id): the ``Id`` of the ``AssetContent`` raise: NotFound - ``asset_content_id`` is not found raise: NullArgument - ``asset_content_id`` is ``null`` raise: OperationFailed - unable to complete request ...
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/filesystem_adapter/repository/sessions.py#L1323-L1340
mitsei/dlkit
dlkit/records/assessment/edx/numeric_response_records.py
edXNumericResponseQuestionFormRecord._init_map
def _init_map(self): """stub""" super(edXNumericResponseQuestionFormRecord, self)._init_map() QuestionTextFormRecord._init_map(self) QuestionFilesFormRecord._init_map(self) self.my_osid_object_form._my_map['text']['text'] = ''
python
def _init_map(self): """stub""" super(edXNumericResponseQuestionFormRecord, self)._init_map() QuestionTextFormRecord._init_map(self) QuestionFilesFormRecord._init_map(self) self.my_osid_object_form._my_map['text']['text'] = ''
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stub
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/records/assessment/edx/numeric_response_records.py#L165-L170
mitsei/dlkit
dlkit/records/assessment/edx/numeric_response_records.py
edXNumericResponseQuestionFormRecord._init_metadata
def _init_metadata(self): """stub""" super(edXNumericResponseQuestionFormRecord, self)._init_metadata() QuestionTextFormRecord._init_metadata(self) QuestionFilesFormRecord._init_metadata(self)
python
def _init_metadata(self): """stub""" super(edXNumericResponseQuestionFormRecord, self)._init_metadata() QuestionTextFormRecord._init_metadata(self) QuestionFilesFormRecord._init_metadata(self)
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stub
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anuragkumarak95/wordnet
wordnet/word_net.py
generate_net
def generate_net(df,tf_idf,dump_path=None): '''Generate WordNetwork dict of Word() instance, and dump as a file if asked to. @Args: -- df : IDF value generated by find_tf_idf() tf_idf : TF-IDF value generated by find_tf_idf() dump_path : file_path where to dump network entities, stand...
python
def generate_net(df,tf_idf,dump_path=None): '''Generate WordNetwork dict of Word() instance, and dump as a file if asked to. @Args: -- df : IDF value generated by find_tf_idf() tf_idf : TF-IDF value generated by find_tf_idf() dump_path : file_path where to dump network entities, stand...
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Generate WordNetwork dict of Word() instance, and dump as a file if asked to. @Args: -- df : IDF value generated by find_tf_idf() tf_idf : TF-IDF value generated by find_tf_idf() dump_path : file_path where to dump network entities, standart format is '.wrnt' (default=None) @returns:...
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https://github.com/anuragkumarak95/wordnet/blob/7aba239ddebb0971e9e76124890373b60a2573c8/wordnet/word_net.py#L14-L73
anuragkumarak95/wordnet
wordnet/word_net.py
retrieve_net
def retrieve_net(wrnt_path): '''Rerieves a dumped Network and generates WordNet instance. @Args: -- wrnt_path : file_path to the '.wrnt' network dumped file. @returns: -- word_net : dict of Word() entities generated from the input file. ''' # Exception Handling of wrong format. ...
python
def retrieve_net(wrnt_path): '''Rerieves a dumped Network and generates WordNet instance. @Args: -- wrnt_path : file_path to the '.wrnt' network dumped file. @returns: -- word_net : dict of Word() entities generated from the input file. ''' # Exception Handling of wrong format. ...
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Rerieves a dumped Network and generates WordNet instance. @Args: -- wrnt_path : file_path to the '.wrnt' network dumped file. @returns: -- word_net : dict of Word() entities generated from the input file.
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https://github.com/anuragkumarak95/wordnet/blob/7aba239ddebb0971e9e76124890373b60a2573c8/wordnet/word_net.py#L76-L100
anuragkumarak95/wordnet
wordnet/word_net.py
return_net
def return_net(word,word_net,depth=1): '''Creates a list of unique words that are at a provided depth from root word. @Args: -- word : root word from which the linked words should be returned. word_net : word network (dictionary of word instances)to be refered in this process. depth : ...
python
def return_net(word,word_net,depth=1): '''Creates a list of unique words that are at a provided depth from root word. @Args: -- word : root word from which the linked words should be returned. word_net : word network (dictionary of word instances)to be refered in this process. depth : ...
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Creates a list of unique words that are at a provided depth from root word. @Args: -- word : root word from which the linked words should be returned. word_net : word network (dictionary of word instances)to be refered in this process. depth : depth to which this process must traverse and...
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cloudnull/cloudlib
cloudlib/parse_ini.py
ConfigurationSetup.load_config
def load_config(self, name=None, path=None, home=False, ext='ini'): """Return the full path to a configuration file. This will look for configuration files in the ``full_path``, in the users home folder, or in a config directory in "/etc". If you set `home=True`, the system will look f...
python
def load_config(self, name=None, path=None, home=False, ext='ini'): """Return the full path to a configuration file. This will look for configuration files in the ``full_path``, in the users home folder, or in a config directory in "/etc". If you set `home=True`, the system will look f...
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train
https://github.com/cloudnull/cloudlib/blob/5038111ce02521caa2558117e3bae9e1e806d315/cloudlib/parse_ini.py#L62-L100
cloudnull/cloudlib
cloudlib/parse_ini.py
ConfigurationSetup._find_config
def _find_config(self, config_file): """This method will check if the configuration file "exist" If it does NOT then the method will bail calling an IOError. :param config_file: ``str`` :return: ``str`` """ msg = ('Configuration file [ %s ] was not found.' % self.filena...
python
def _find_config(self, config_file): """This method will check if the configuration file "exist" If it does NOT then the method will bail calling an IOError. :param config_file: ``str`` :return: ``str`` """ msg = ('Configuration file [ %s ] was not found.' % self.filena...
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This method will check if the configuration file "exist" If it does NOT then the method will bail calling an IOError. :param config_file: ``str`` :return: ``str``
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train
https://github.com/cloudnull/cloudlib/blob/5038111ce02521caa2558117e3bae9e1e806d315/cloudlib/parse_ini.py#L102-L112
cloudnull/cloudlib
cloudlib/parse_ini.py
ConfigurationSetup.check_perms
def check_perms(self, perms='0600,0400'): """Check and enforce the permissions of the config file. Enforce permission on a provided configuration file. This will check and see if the permission are set based on the permission octet as set in the ``perms`` value. ``perms`` is a comma sep...
python
def check_perms(self, perms='0600,0400'): """Check and enforce the permissions of the config file. Enforce permission on a provided configuration file. This will check and see if the permission are set based on the permission octet as set in the ``perms`` value. ``perms`` is a comma sep...
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train
https://github.com/cloudnull/cloudlib/blob/5038111ce02521caa2558117e3bae9e1e806d315/cloudlib/parse_ini.py#L114-L139
cloudnull/cloudlib
cloudlib/parse_ini.py
ConfigurationSetup.config_args
def config_args(self, section='default'): """Loop through the configuration file and set all of our values. Note: that anything can be set as a "section" in the argument file. If a section does not exist an empty dict will be returned. :param section: ``str`` :retu...
python
def config_args(self, section='default'): """Loop through the configuration file and set all of our values. Note: that anything can be set as a "section" in the argument file. If a section does not exist an empty dict will be returned. :param section: ``str`` :retu...
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train
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mitsei/dlkit
dlkit/authz_adapter/repository/managers.py
RepositoryManager.get_asset_content_lookup_session
def get_asset_content_lookup_session(self): """Pass through to provider get_asset_content_lookup_session""" return getattr(sessions, 'AssetContentLookupSession')( provider_session=self._provider_manager.get_asset_content_lookup_session(), authz_session=self._authz_session)
python
def get_asset_content_lookup_session(self): """Pass through to provider get_asset_content_lookup_session""" return getattr(sessions, 'AssetContentLookupSession')( provider_session=self._provider_manager.get_asset_content_lookup_session(), authz_session=self._authz_session)
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Pass through to provider get_asset_content_lookup_session
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/authz_adapter/repository/managers.py#L224-L228
mitsei/dlkit
dlkit/authz_adapter/repository/managers.py
RepositoryManager.get_asset_content_lookup_session_for_repository
def get_asset_content_lookup_session_for_repository(self, repository_id): """Pass through to provider get_asset_content_lookup_session_for_repository""" return getattr(sessions, 'AssetContentLookupSession')( provider_session=self._provider_manager.get_asset_content_lookup_session_for_reposit...
python
def get_asset_content_lookup_session_for_repository(self, repository_id): """Pass through to provider get_asset_content_lookup_session_for_repository""" return getattr(sessions, 'AssetContentLookupSession')( provider_session=self._provider_manager.get_asset_content_lookup_session_for_reposit...
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Pass through to provider get_asset_content_lookup_session_for_repository
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train
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mitsei/dlkit
dlkit/authz_adapter/repository/managers.py
RepositoryProxyManager.get_asset_content_lookup_session
def get_asset_content_lookup_session(self, proxy): """Pass through to provider get_asset_content_lookup_session""" return getattr(sessions, 'AssetContentLookupSession')( provider_session=self._provider_manager.get_asset_content_lookup_session(proxy), authz_session=self._get_authz...
python
def get_asset_content_lookup_session(self, proxy): """Pass through to provider get_asset_content_lookup_session""" return getattr(sessions, 'AssetContentLookupSession')( provider_session=self._provider_manager.get_asset_content_lookup_session(proxy), authz_session=self._get_authz...
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Pass through to provider get_asset_content_lookup_session
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train
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jason-weirather/py-seq-tools
seqtools/structure/transcript/group.py
ExonGroup.start_range
def start_range(self): """Similar to the junction range but don't need to check for leftmost or rightmost""" if len(self._exons) == 0: return None return GenomicRange(self._exons[0].chr, min([x.start for x in self._exons]),# must be part of junction max([x.start for x in self...
python
def start_range(self): """Similar to the junction range but don't need to check for leftmost or rightmost""" if len(self._exons) == 0: return None return GenomicRange(self._exons[0].chr, min([x.start for x in self._exons]),# must be part of junction max([x.start for x in self...
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Similar to the junction range but don't need to check for leftmost or rightmost
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https://github.com/jason-weirather/py-seq-tools/blob/f642c2c73ffef2acc83656a78059a476fc734ca1/seqtools/structure/transcript/group.py#L23-L28
jason-weirather/py-seq-tools
seqtools/structure/transcript/group.py
ExonGroup.end_range
def end_range(self): """Similar to the junction range but don't need to check for leftmost or rightmost""" if len(self._exons) == 0: return None return GenomicRange(self._exons[0].chr, min([x.end for x in self._exons]), max([x.end for x in self._exons]))
python
def end_range(self): """Similar to the junction range but don't need to check for leftmost or rightmost""" if len(self._exons) == 0: return None return GenomicRange(self._exons[0].chr, min([x.end for x in self._exons]), max([x.end for x in self._exons]))
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Similar to the junction range but don't need to check for leftmost or rightmost
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jason-weirather/py-seq-tools
seqtools/structure/transcript/group.py
FuzzyTranscript._rngs
def _rngs(self): """This is where we should also enforce evidence requirements""" outputs = [] if len(self._exon_groups)==1: return [self._exon_groups.consensus('single')] z = 0 #output count begin = 0 meeting_criteria = [i for i in range(0,len(self._exon_groups)) if len(se...
python
def _rngs(self): """This is where we should also enforce evidence requirements""" outputs = [] if len(self._exon_groups)==1: return [self._exon_groups.consensus('single')] z = 0 #output count begin = 0 meeting_criteria = [i for i in range(0,len(self._exon_groups)) if len(se...
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https://github.com/jason-weirather/py-seq-tools/blob/f642c2c73ffef2acc83656a78059a476fc734ca1/seqtools/structure/transcript/group.py#L97-L122
jason-weirather/py-seq-tools
seqtools/structure/transcript/group.py
FuzzyTranscript.add_transcripts
def add_transcripts(self,txs): """We traverse through the other transcripts and try to add to these groups """ passed = [] for tx2 in txs: for tx1 in self._initial: jov = tx1.junction_overlap(tx2,self._tolerance) sub = jov.is_subset() if sub == 1 or s...
python
def add_transcripts(self,txs): """We traverse through the other transcripts and try to add to these groups """ passed = [] for tx2 in txs: for tx1 in self._initial: jov = tx1.junction_overlap(tx2,self._tolerance) sub = jov.is_subset() if sub == 1 or s...
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https://github.com/jason-weirather/py-seq-tools/blob/f642c2c73ffef2acc83656a78059a476fc734ca1/seqtools/structure/transcript/group.py#L129-L145
jason-weirather/py-seq-tools
seqtools/structure/transcript/group.py
FuzzyTranscript.add_transcript
def add_transcript(self,tx): """add a single transcript""" candidates = tx.junctions targets = self.junctions matches = [] for i in range(0,len(targets)): for j in range(0,len(candidates)): if targets[i].overlaps(candidates[j],self._tolerance): matches.a...
python
def add_transcript(self,tx): """add a single transcript""" candidates = tx.junctions targets = self.junctions matches = [] for i in range(0,len(targets)): for j in range(0,len(candidates)): if targets[i].overlaps(candidates[j],self._tolerance): matches.a...
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add a single transcript
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https://github.com/jason-weirather/py-seq-tools/blob/f642c2c73ffef2acc83656a78059a476fc734ca1/seqtools/structure/transcript/group.py#L147-L165
jason-weirather/py-seq-tools
seqtools/structure/transcript/group.py
Deconvolution.parse
def parse(self,tolerance=0,downsample=None,evidence=2,use_gene_names=False): """Divide out the transcripts. allow junction tolerance if wanted""" g = Graph() nodes = [Node(x) for x in self._transcripts] for n in nodes: g.add_node(n) for i in range(0,len(nodes)): for j in range(0,...
python
def parse(self,tolerance=0,downsample=None,evidence=2,use_gene_names=False): """Divide out the transcripts. allow junction tolerance if wanted""" g = Graph() nodes = [Node(x) for x in self._transcripts] for n in nodes: g.add_node(n) for i in range(0,len(nodes)): for j in range(0,...
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jason-weirather/py-seq-tools
seqtools/stream.py
LocusStream.read_entry
def read_entry(self): """As long as entires overlap keep putting them together in a list that is the payload for a range that describes the bounds of the list :return: range with payload list of elements :rtype: GenomicRange """ if not self._current_range: return None ...
python
def read_entry(self): """As long as entires overlap keep putting them together in a list that is the payload for a range that describes the bounds of the list :return: range with payload list of elements :rtype: GenomicRange """ if not self._current_range: return None ...
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vimalkvn/riboplot
riboplot/riboplot.py
get_start_stops
def get_start_stops(transcript_sequence, start_codons=None, stop_codons=None): """Return start and stop positions for all frames in the given transcript. """ transcript_sequence = transcript_sequence.upper() # for comparison with codons below if not start_codons: st...
python
def get_start_stops(transcript_sequence, start_codons=None, stop_codons=None): """Return start and stop positions for all frames in the given transcript. """ transcript_sequence = transcript_sequence.upper() # for comparison with codons below if not start_codons: st...
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Return start and stop positions for all frames in the given transcript.
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https://github.com/vimalkvn/riboplot/blob/914515df54eccc2e726ba71e751c3260f2066d97/riboplot/riboplot.py#L47-L79
vimalkvn/riboplot
riboplot/riboplot.py
get_rna_counts
def get_rna_counts(rna_file, transcript_name): """Get coverage for a given RNA BAM file, return read counts. """ # check if the RNA file exists if not os.path.exists(rna_file): msg = 'RNA-Seq BAM file "{}" does not exist'.format(rna_file) logging.error(msg) raise OSError(msg) rna...
python
def get_rna_counts(rna_file, transcript_name): """Get coverage for a given RNA BAM file, return read counts. """ # check if the RNA file exists if not os.path.exists(rna_file): msg = 'RNA-Seq BAM file "{}" does not exist'.format(rna_file) logging.error(msg) raise OSError(msg) rna...
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https://github.com/vimalkvn/riboplot/blob/914515df54eccc2e726ba71e751c3260f2066d97/riboplot/riboplot.py#L82-L106
vimalkvn/riboplot
riboplot/riboplot.py
set_axis_color
def set_axis_color(axis, color, alpha=None): """Sets the spine color of all sides of an axis (top, right, bottom, left).""" for side in ('top', 'right', 'bottom', 'left'): spine = axis.spines[side] spine.set_color(color) if alpha is not None: spine.set_alpha(alpha)
python
def set_axis_color(axis, color, alpha=None): """Sets the spine color of all sides of an axis (top, right, bottom, left).""" for side in ('top', 'right', 'bottom', 'left'): spine = axis.spines[side] spine.set_color(color) if alpha is not None: spine.set_alpha(alpha)
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vimalkvn/riboplot
riboplot/riboplot.py
get_color_palette
def get_color_palette(scheme): """Return colors for a given scheme. Default colors are returned for an item if undefined in scheme. """ color_schemes = { 'default': { 'frames': ['tomato', 'limegreen', 'deepskyblue'], 'background': '#ffffff', 'color': '#616161', 'ticks': ...
python
def get_color_palette(scheme): """Return colors for a given scheme. Default colors are returned for an item if undefined in scheme. """ color_schemes = { 'default': { 'frames': ['tomato', 'limegreen', 'deepskyblue'], 'background': '#ffffff', 'color': '#616161', 'ticks': ...
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Return colors for a given scheme. Default colors are returned for an item if undefined in scheme.
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vimalkvn/riboplot
riboplot/riboplot.py
plot_profile
def plot_profile(ribo_counts, transcript_name, transcript_length, start_stops, read_lengths=None, read_offsets=None, rna_counts=None, color_scheme='default', html_file='index.html', output_path='output'): """Plot read counts (in all 3 frames) and RNA coverage if provided for a ...
python
def plot_profile(ribo_counts, transcript_name, transcript_length, start_stops, read_lengths=None, read_offsets=None, rna_counts=None, color_scheme='default', html_file='index.html', output_path='output'): """Plot read counts (in all 3 frames) and RNA coverage if provided for a ...
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Plot read counts (in all 3 frames) and RNA coverage if provided for a single transcript.
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vimalkvn/riboplot
riboplot/riboplot.py
create_parser
def create_parser(): """Argument parser. """ parser = argparse.ArgumentParser( prog='riboplot.py', description='Plot and output read counts for a single transcript') required = parser.add_argument_group('required arguments') required.add_argument('-b', '--ribo_file', help='Ribo-Seq alignment fi...
python
def create_parser(): """Argument parser. """ parser = argparse.ArgumentParser( prog='riboplot.py', description='Plot and output read counts for a single transcript') required = parser.add_argument_group('required arguments') required.add_argument('-b', '--ribo_file', help='Ribo-Seq alignment fi...
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vimalkvn/riboplot
riboplot/riboplot.py
main
def main(args): """Main program""" (ribo_file, rna_file, transcript_name, transcriptome_fasta, read_lengths, read_offsets, output_path, html_file) = ( args.ribo_file, args.rna_file, args.transcript_name, args.transcriptome_fasta, args.read_lengths, args.read_offsets, args.output_path, arg...
python
def main(args): """Main program""" (ribo_file, rna_file, transcript_name, transcriptome_fasta, read_lengths, read_offsets, output_path, html_file) = ( args.ribo_file, args.rna_file, args.transcript_name, args.transcriptome_fasta, args.read_lengths, args.read_offsets, args.output_path, arg...
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https://github.com/vimalkvn/riboplot/blob/914515df54eccc2e726ba71e751c3260f2066d97/riboplot/riboplot.py#L322-L414
mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
BaseMultiChoiceQuestionFormRecord._init_metadata
def _init_metadata(self): """stub""" self._choices_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, 'choices'), 'element_label': 'Choices', 'instructions':...
python
def _init_metadata(self): """stub""" self._choices_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, 'choices'), 'element_label': 'Choices', 'instructions':...
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stub
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mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
BaseMultiChoiceQuestionFormRecord.clear_choice
def clear_choice(self, choice): """stub""" if len(self.my_osid_object_form._my_map['choices']) == 0: raise IllegalState('there are currently no choices defined for this question') if (len(self.my_osid_object_form._my_map['choices']) == 1 and choice in self.my_osid_obj...
python
def clear_choice(self, choice): """stub""" if len(self.my_osid_object_form._my_map['choices']) == 0: raise IllegalState('there are currently no choices defined for this question') if (len(self.my_osid_object_form._my_map['choices']) == 1 and choice in self.my_osid_obj...
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stub
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mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
BaseMultiChoiceTextQuestionFormRecord._init_metadata
def _init_metadata(self): """stub""" super(BaseMultiChoiceTextQuestionFormRecord, self)._init_metadata() self._choice_text_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, ...
python
def _init_metadata(self): """stub""" super(BaseMultiChoiceTextQuestionFormRecord, self)._init_metadata() self._choice_text_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, ...
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mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
BaseMultiChoiceTextQuestionFormRecord.add_choice
def add_choice(self, text, name='', identifier=None): """stub""" if not utilities.is_string(text): raise InvalidArgument('text is not a string') choice_display_text = self._choice_text_metadata['default_string_values'][0] choice_display_text['text'] = text if identifi...
python
def add_choice(self, text, name='', identifier=None): """stub""" if not utilities.is_string(text): raise InvalidArgument('text is not a string') choice_display_text = self._choice_text_metadata['default_string_values'][0] choice_display_text['text'] = text if identifi...
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stub
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mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
BaseMultiChoiceFileQuestionFormRecord._init_metadata
def _init_metadata(self): """stub""" super(BaseMultiChoiceFileQuestionFormRecord, self)._init_metadata() self._choice_file_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, ...
python
def _init_metadata(self): """stub""" super(BaseMultiChoiceFileQuestionFormRecord, self)._init_metadata() self._choice_file_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, ...
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stub
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mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
BaseMultiChoiceFileQuestionFormRecord.add_choice
def add_choice(self, asset_id, name='', identifier=None): """stub""" if identifier is None: identifier = str(ObjectId()) self.my_osid_object_form._my_map['choices'].append({ 'id': identifier, 'assetId': str(asset_id), 'name': name }) ...
python
def add_choice(self, asset_id, name='', identifier=None): """stub""" if identifier is None: identifier = str(ObjectId()) self.my_osid_object_form._my_map['choices'].append({ 'id': identifier, 'assetId': str(asset_id), 'name': name }) ...
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stub
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mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiChoiceTextAndFilesQuestionFormRecord._init_map
def _init_map(self): """stub""" QuestionTextAndFilesMixin._init_map(self) BaseMultiChoiceTextQuestionFormRecord._init_map(self) super(MultiChoiceTextAndFilesQuestionFormRecord, self)._init_map()
python
def _init_map(self): """stub""" QuestionTextAndFilesMixin._init_map(self) BaseMultiChoiceTextQuestionFormRecord._init_map(self) super(MultiChoiceTextAndFilesQuestionFormRecord, self)._init_map()
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stub
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train
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mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiChoiceTextAndFilesQuestionFormRecord._init_metadata
def _init_metadata(self): """stub""" QuestionTextAndFilesMixin._init_metadata(self) BaseMultiChoiceTextQuestionFormRecord._init_metadata(self) super(MultiChoiceTextAndFilesQuestionFormRecord, self)._init_metadata()
python
def _init_metadata(self): """stub""" QuestionTextAndFilesMixin._init_metadata(self) BaseMultiChoiceTextQuestionFormRecord._init_metadata(self) super(MultiChoiceTextAndFilesQuestionFormRecord, self)._init_metadata()
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mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiChoiceAnswerFormRecord._init_metadata
def _init_metadata(self): """stub""" self._choice_ids_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, 'choice_ids'), 'element_label': 'response set', 'ins...
python
def _init_metadata(self): """stub""" self._choice_ids_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, 'choice_ids'), 'element_label': 'response set', 'ins...
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stub
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https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/records/assessment/basic/multi_choice_records.py#L626-L654
mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiChoiceAnswerFormRecord.clear_choice_ids
def clear_choice_ids(self): """stub""" if (self.get_choice_ids_metadata().is_read_only() or self.get_choice_ids_metadata().is_required()): raise NoAccess() self.my_osid_object_form._my_map['choiceIds'] = \ self._choice_ids_metadata['default_object_values']...
python
def clear_choice_ids(self): """stub""" if (self.get_choice_ids_metadata().is_read_only() or self.get_choice_ids_metadata().is_required()): raise NoAccess() self.my_osid_object_form._my_map['choiceIds'] = \ self._choice_ids_metadata['default_object_values']...
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stub
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/records/assessment/basic/multi_choice_records.py#L670-L676
mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiChoiceFeedbackAndFilesAnswerFormRecord._init_map
def _init_map(self): """stub""" MultiChoiceAnswerFormRecord._init_map(self) FilesAnswerFormRecord._init_map(self) FeedbackAnswerFormRecord._init_map(self) super(MultiChoiceFeedbackAndFilesAnswerFormRecord, self)._init_map()
python
def _init_map(self): """stub""" MultiChoiceAnswerFormRecord._init_map(self) FilesAnswerFormRecord._init_map(self) FeedbackAnswerFormRecord._init_map(self) super(MultiChoiceFeedbackAndFilesAnswerFormRecord, self)._init_map()
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/records/assessment/basic/multi_choice_records.py#L707-L712
mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiChoiceFeedbackAndFilesAnswerFormRecord._init_metadata
def _init_metadata(self): """stub""" MultiChoiceAnswerFormRecord._init_metadata(self) FilesAnswerFormRecord._init_metadata(self) FeedbackAnswerFormRecord._init_metadata(self) super(MultiChoiceFeedbackAndFilesAnswerFormRecord, self)._init_metadata()
python
def _init_metadata(self): """stub""" MultiChoiceAnswerFormRecord._init_metadata(self) FilesAnswerFormRecord._init_metadata(self) FeedbackAnswerFormRecord._init_metadata(self) super(MultiChoiceFeedbackAndFilesAnswerFormRecord, self)._init_metadata()
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https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/records/assessment/basic/multi_choice_records.py#L714-L719
mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiLanguageMultipleChoiceQuestionRecord.get_choices
def get_choices(self): """stub""" # ideally would return a displayText object in text ... except for legacy # use cases like OEA, it expects a text string. choices = [] # for current_choice in self.my_osid_object.object_map['choices']: for current_choice in self.my_osid_o...
python
def get_choices(self): """stub""" # ideally would return a displayText object in text ... except for legacy # use cases like OEA, it expects a text string. choices = [] # for current_choice in self.my_osid_object.object_map['choices']: for current_choice in self.my_osid_o...
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stub
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/records/assessment/basic/multi_choice_records.py#L799-L813
mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiLanguageMultipleChoiceQuestionFormRecord._init_map
def _init_map(self): """stub""" super(MultiLanguageMultipleChoiceQuestionFormRecord, self)._init_map() self.my_osid_object_form._my_map['choices'] = \ self._choices_metadata['default_object_values'][0]
python
def _init_map(self): """stub""" super(MultiLanguageMultipleChoiceQuestionFormRecord, self)._init_map() self.my_osid_object_form._my_map['choices'] = \ self._choices_metadata['default_object_values'][0]
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stub
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train
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mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiLanguageMultipleChoiceQuestionFormRecord._init_metadata
def _init_metadata(self): """stub""" super(MultiLanguageMultipleChoiceQuestionFormRecord, self)._init_metadata() self._choices_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, ...
python
def _init_metadata(self): """stub""" super(MultiLanguageMultipleChoiceQuestionFormRecord, self)._init_metadata() self._choices_metadata = { 'element_id': Id(self.my_osid_object_form._authority, self.my_osid_object_form._namespace, ...
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train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/records/assessment/basic/multi_choice_records.py#L840-L856
mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiLanguageMultipleChoiceQuestionFormRecord.add_choice
def add_choice(self, choice, name='', identifier=None): """stub""" if not isinstance(choice, DisplayText): raise InvalidArgument('choice is not a displayText object') if identifier is None: identifier = str(ObjectId()) current_identifiers = [c['id'] for c in self....
python
def add_choice(self, choice, name='', identifier=None): """stub""" if not isinstance(choice, DisplayText): raise InvalidArgument('choice is not a displayText object') if identifier is None: identifier = str(ObjectId()) current_identifiers = [c['id'] for c in self....
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stub
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mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiLanguageMultipleChoiceQuestionFormRecord.clear_choices
def clear_choices(self): """stub""" if self.get_choices_metadata().is_read_only(): raise NoAccess() self.my_osid_object_form._my_map['choices'] = \ self._choices_metadata['default_object_values'][0]
python
def clear_choices(self): """stub""" if self.get_choices_metadata().is_read_only(): raise NoAccess() self.my_osid_object_form._my_map['choices'] = \ self._choices_metadata['default_object_values'][0]
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stub
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https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/records/assessment/basic/multi_choice_records.py#L884-L889
mitsei/dlkit
dlkit/records/assessment/basic/multi_choice_records.py
MultiLanguageMultipleChoiceQuestionFormRecord.clear_choice_texts
def clear_choice_texts(self, choice_id): """stub""" if self.get_choices_metadata().is_read_only(): raise NoAccess() updated_choices = [] for current_choice in self.my_osid_object_form._my_map['choices']: if current_choice['id'] != choice_id: update...
python
def clear_choice_texts(self, choice_id): """stub""" if self.get_choices_metadata().is_read_only(): raise NoAccess() updated_choices = [] for current_choice in self.my_osid_object_form._my_map['choices']: if current_choice['id'] != choice_id: update...
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stub
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train
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ND-CSE-30151/tock
tock/tables.py
read_csv
def read_csv(filename): """Reads a CSV file containing a tabular description of a transition function, as found in Sipser. Major difference: instead of multiple header rows, only a single header row whose entries might be tuples. """ with open(filename) as file: table = list(csv.re...
python
def read_csv(filename): """Reads a CSV file containing a tabular description of a transition function, as found in Sipser. Major difference: instead of multiple header rows, only a single header row whose entries might be tuples. """ with open(filename) as file: table = list(csv.re...
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Reads a CSV file containing a tabular description of a transition function, as found in Sipser. Major difference: instead of multiple header rows, only a single header row whose entries might be tuples.
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train
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ND-CSE-30151/tock
tock/tables.py
read_excel
def read_excel(filename, sheet=None): """Reads an Excel file containing a tabular description of a transition function, as found in Sipser. Major difference: instead of multiple header rows, only a single header row whose entries might be tuples. """ from openpyxl import load_workbook ...
python
def read_excel(filename, sheet=None): """Reads an Excel file containing a tabular description of a transition function, as found in Sipser. Major difference: instead of multiple header rows, only a single header row whose entries might be tuples. """ from openpyxl import load_workbook ...
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Reads an Excel file containing a tabular description of a transition function, as found in Sipser. Major difference: instead of multiple header rows, only a single header row whose entries might be tuples.
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train
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nrcharles/caelum
caelum/forecast.py
data
def data(place): """get forecast data.""" lat, lon = place url = "https://api.forecast.io/forecast/%s/%s,%s?solar" % (APIKEY, lat, lon) w_data = json.loads(urllib2.urlopen(url).read()) return w_data
python
def data(place): """get forecast data.""" lat, lon = place url = "https://api.forecast.io/forecast/%s/%s,%s?solar" % (APIKEY, lat, lon) w_data = json.loads(urllib2.urlopen(url).read()) return w_data
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get forecast data.
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nrcharles/caelum
caelum/forecast.py
mangle
def mangle(data_point): """mangle data into expected format.""" temp_dict = {} temp_dict.update(data_point) temp_dict['utc_datetime'] = \ datetime.datetime.utcfromtimestamp(temp_dict['time']) if 'solar' in data_point: temp_dict['GHI (W/m^2)'] = data_point['solar']['ghi'] temp...
python
def mangle(data_point): """mangle data into expected format.""" temp_dict = {} temp_dict.update(data_point) temp_dict['utc_datetime'] = \ datetime.datetime.utcfromtimestamp(temp_dict['time']) if 'solar' in data_point: temp_dict['GHI (W/m^2)'] = data_point['solar']['ghi'] temp...
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mangle data into expected format.
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nrcharles/caelum
caelum/forecast.py
hourly
def hourly(place): """return data as list of dicts with all data filled in.""" # time in utc? lat, lon = place url = "https://api.forecast.io/forecast/%s/%s,%s?solar" % (APIKEY, lat, lon) w_data = json.loads(urllib2.urlopen(url).read()) ...
python
def hourly(place): """return data as list of dicts with all data filled in.""" # time in utc? lat, lon = place url = "https://api.forecast.io/forecast/%s/%s,%s?solar" % (APIKEY, lat, lon) w_data = json.loads(urllib2.urlopen(url).read()) ...
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return data as list of dicts with all data filled in.
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nrcharles/caelum
caelum/forecast.py
current
def current(place): """return data as list of dicts with all data filled in.""" lat, lon = place url = "https://api.forecast.io/forecast/%s/%s,%s?solar" % (APIKEY, lat, lon) w_data = json.loads(urllib2.urlopen(url).read()) currently = w_...
python
def current(place): """return data as list of dicts with all data filled in.""" lat, lon = place url = "https://api.forecast.io/forecast/%s/%s,%s?solar" % (APIKEY, lat, lon) w_data = json.loads(urllib2.urlopen(url).read()) currently = w_...
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return data as list of dicts with all data filled in.
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compmech/composites
composites/laminate.py
read_stack
def read_stack(stack, plyt=None, laminaprop=None, rho=None, plyts=None, laminaprops=None, rhos=None, offset=0., calc_scf=True): """Read a laminate stacking sequence data. An ``Laminate`` object is returned based on the inputs given. Parameters ---------- stack : list Angles of the ...
python
def read_stack(stack, plyt=None, laminaprop=None, rho=None, plyts=None, laminaprops=None, rhos=None, offset=0., calc_scf=True): """Read a laminate stacking sequence data. An ``Laminate`` object is returned based on the inputs given. Parameters ---------- stack : list Angles of the ...
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Read a laminate stacking sequence data. An ``Laminate`` object is returned based on the inputs given. Parameters ---------- stack : list Angles of the stacking sequence in degrees. plyt : float, optional When all plies have the same thickness, ``plyt`` can be supplied. laminapr...
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train
https://github.com/compmech/composites/blob/3c5d4fd6033898e35a5085063af5dbb81eb6a97d/composites/laminate.py#L16-L93
compmech/composites
composites/laminate.py
read_lamination_parameters
def read_lamination_parameters(thickness, laminaprop, rho, xiA1, xiA2, xiA3, xiA4, xiB1, xiB2, xiB3, xiB4, xiD1, xiD2, xiD3, xiD4, xiE1, xiE2, xiE3, xiE4): r"""Calculates a laminate based on t...
python
def read_lamination_parameters(thickness, laminaprop, rho, xiA1, xiA2, xiA3, xiA4, xiB1, xiB2, xiB3, xiB4, xiD1, xiD2, xiD3, xiD4, xiE1, xiE2, xiE3, xiE4): r"""Calculates a laminate based on t...
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r"""Calculates a laminate based on the lamination parameters. The lamination parameters: `\xi_{A1} \cdots \xi_{A4}`, `\xi_{B1} \cdots \xi_{B4}`, `\xi_{C1} \cdots \xi_{C4}`, `\xi_{D1} \cdots \xi_{D4}`, `\xi_{E1} \cdots \xi_{E4}` are used to calculate the laminate constitutive matrix. Paramet...
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train
https://github.com/compmech/composites/blob/3c5d4fd6033898e35a5085063af5dbb81eb6a97d/composites/laminate.py#L96-L136
compmech/composites
composites/laminate.py
Laminate.calc_scf
def calc_scf(self): """Calculate improved shear correction factors Reference: Vlachoutsis, S. "Shear correction factors for plates and shells", Int. Journal for Numerical Methods in Engineering, Vol. 33, 1537-1552, 1992. http://onlinelibrary.wiley.com/d...
python
def calc_scf(self): """Calculate improved shear correction factors Reference: Vlachoutsis, S. "Shear correction factors for plates and shells", Int. Journal for Numerical Methods in Engineering, Vol. 33, 1537-1552, 1992. http://onlinelibrary.wiley.com/d...
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Calculate improved shear correction factors Reference: Vlachoutsis, S. "Shear correction factors for plates and shells", Int. Journal for Numerical Methods in Engineering, Vol. 33, 1537-1552, 1992. http://onlinelibrary.wiley.com/doi/10.1002/nme.1620330712/full ...
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compmech/composites
composites/laminate.py
Laminate.calc_equivalent_modulus
def calc_equivalent_modulus(self): """Calculates the equivalent laminate properties. The following attributes are calculated: e1, e2, g12, nu12, nu21 """ AI = np.matrix(self.ABD, dtype=np.float64).I a11, a12, a22, a33 = AI[0,0], AI[0,1], AI[1,1], AI[2,2] sel...
python
def calc_equivalent_modulus(self): """Calculates the equivalent laminate properties. The following attributes are calculated: e1, e2, g12, nu12, nu21 """ AI = np.matrix(self.ABD, dtype=np.float64).I a11, a12, a22, a33 = AI[0,0], AI[0,1], AI[1,1], AI[2,2] sel...
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Calculates the equivalent laminate properties. The following attributes are calculated: e1, e2, g12, nu12, nu21
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train
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compmech/composites
composites/laminate.py
Laminate.calc_lamination_parameters
def calc_lamination_parameters(self): """Calculate the lamination parameters. The following attributes are calculated: xiA, xiB, xiD, xiE """ if len(self.plies) == 0: if self.xiA is None: raise ValueError('Laminate with 0 plies!') els...
python
def calc_lamination_parameters(self): """Calculate the lamination parameters. The following attributes are calculated: xiA, xiB, xiD, xiE """ if len(self.plies) == 0: if self.xiA is None: raise ValueError('Laminate with 0 plies!') els...
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Calculate the lamination parameters. The following attributes are calculated: xiA, xiB, xiD, xiE
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compmech/composites
composites/laminate.py
Laminate.calc_ABDE_from_lamination_parameters
def calc_ABDE_from_lamination_parameters(self): """Use the ABDE matrix based on lamination parameters. Given the lamination parameters ``xiA``, ``xiB``, ``xiC`` and ``xiD``, the ABD matrix is calculated. """ # dummies used to unpack vector results du1, du2, du3, du4, du...
python
def calc_ABDE_from_lamination_parameters(self): """Use the ABDE matrix based on lamination parameters. Given the lamination parameters ``xiA``, ``xiB``, ``xiC`` and ``xiD``, the ABD matrix is calculated. """ # dummies used to unpack vector results du1, du2, du3, du4, du...
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Use the ABDE matrix based on lamination parameters. Given the lamination parameters ``xiA``, ``xiB``, ``xiC`` and ``xiD``, the ABD matrix is calculated.
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train
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compmech/composites
composites/laminate.py
Laminate.calc_constitutive_matrix
def calc_constitutive_matrix(self): """Calculates the laminate constitutive matrix This is the commonly called ``ABD`` matrix with ``shape=(6, 6)`` when the classical laminated plate theory is used, or the ``ABDE`` matrix when the first-order shear deformation theory is used, containing...
python
def calc_constitutive_matrix(self): """Calculates the laminate constitutive matrix This is the commonly called ``ABD`` matrix with ``shape=(6, 6)`` when the classical laminated plate theory is used, or the ``ABDE`` matrix when the first-order shear deformation theory is used, containing...
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Calculates the laminate constitutive matrix This is the commonly called ``ABD`` matrix with ``shape=(6, 6)`` when the classical laminated plate theory is used, or the ``ABDE`` matrix when the first-order shear deformation theory is used, containing the transverse shear terms.
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train
https://github.com/compmech/composites/blob/3c5d4fd6033898e35a5085063af5dbb81eb6a97d/composites/laminate.py#L413-L449
compmech/composites
composites/laminate.py
Laminate.force_balanced_LP
def force_balanced_LP(self): r"""Force balanced lamination parameters The lamination parameters `\xi_{A2}` and `\xi_{A4}` are set to null to force a balanced laminate. """ dummy, xiA1, xiA2, xiA3, xiA4 = self.xiA self.xiA = np.array([1, xiA1, 0, xiA3, 0], dtype=np.float...
python
def force_balanced_LP(self): r"""Force balanced lamination parameters The lamination parameters `\xi_{A2}` and `\xi_{A4}` are set to null to force a balanced laminate. """ dummy, xiA1, xiA2, xiA3, xiA4 = self.xiA self.xiA = np.array([1, xiA1, 0, xiA3, 0], dtype=np.float...
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compmech/composites
composites/laminate.py
Laminate.force_orthotropic
def force_orthotropic(self): r"""Force an orthotropic laminate The terms `A_{13}`, `A_{23}`, `A_{31}`, `A_{32}`, `B_{13}`, `B_{23}`, `B_{31}`, `B_{32}`, `D_{13}`, `D_{23}`, `D_{31}`, `D_{32}` are set to zero to force an orthotropic laminate. """ if self....
python
def force_orthotropic(self): r"""Force an orthotropic laminate The terms `A_{13}`, `A_{23}`, `A_{31}`, `A_{32}`, `B_{13}`, `B_{23}`, `B_{31}`, `B_{32}`, `D_{13}`, `D_{23}`, `D_{31}`, `D_{32}` are set to zero to force an orthotropic laminate. """ if self....
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r"""Force an orthotropic laminate The terms `A_{13}`, `A_{23}`, `A_{31}`, `A_{32}`, `B_{13}`, `B_{23}`, `B_{31}`, `B_{32}`, `D_{13}`, `D_{23}`, `D_{31}`, `D_{32}` are set to zero to force an orthotropic laminate.
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compmech/composites
composites/laminate.py
Laminate.force_symmetric
def force_symmetric(self): """Force a symmetric laminate The `B` terms of the constitutive matrix are set to zero. """ if self.offset != 0.: raise RuntimeError( 'Laminates with offset cannot be forced symmetric!') self.B = np.zeros((3,3)) ...
python
def force_symmetric(self): """Force a symmetric laminate The `B` terms of the constitutive matrix are set to zero. """ if self.offset != 0.: raise RuntimeError( 'Laminates with offset cannot be forced symmetric!') self.B = np.zeros((3,3)) ...
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Force a symmetric laminate The `B` terms of the constitutive matrix are set to zero.
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train
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mitsei/dlkit
dlkit/handcar/grading/objects.py
GradeList.get_next_grade
def get_next_grade(self): """Gets the next ``Grade`` in this list. return: (osid.grading.Grade) - the next ``Grade`` in this list. The ``has_next()`` method should be used to test that a next ``Grade`` is available before calling this method. raise: IllegalState...
python
def get_next_grade(self): """Gets the next ``Grade`` in this list. return: (osid.grading.Grade) - the next ``Grade`` in this list. The ``has_next()`` method should be used to test that a next ``Grade`` is available before calling this method. raise: IllegalState...
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mitsei/dlkit
dlkit/handcar/grading/objects.py
GradeSystem.get_grade_ids
def get_grade_ids(self): """Gets the grade Ids in this system ranked from highest to lowest. return: (osid.id.IdList) - the list of grades Ids raise: IllegalState - is_based_on_grades() is false compliance: mandatory - This method must be implemented. """ id_list = [] ...
python
def get_grade_ids(self): """Gets the grade Ids in this system ranked from highest to lowest. return: (osid.id.IdList) - the list of grades Ids raise: IllegalState - is_based_on_grades() is false compliance: mandatory - This method must be implemented. """ id_list = [] ...
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Gets the grade Ids in this system ranked from highest to lowest. return: (osid.id.IdList) - the list of grades Ids raise: IllegalState - is_based_on_grades() is false compliance: mandatory - This method must be implemented.
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alevinval/scheduling
scheduling/tasks.py
Task.wait_and_join
def wait_and_join(self, task): """ Given a task, waits for it until it finishes :param task: Task :return: """ while not task.has_started: time.sleep(self._polling_time) task.thread.join()
python
def wait_and_join(self, task): """ Given a task, waits for it until it finishes :param task: Task :return: """ while not task.has_started: time.sleep(self._polling_time) task.thread.join()
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alevinval/scheduling
scheduling/tasks.py
Task.depends
def depends(self, *tasks): """ Interfaces the GraphNode `depends` method """ nodes = [x.node for x in tasks] self.node.depends(*nodes) return self
python
def depends(self, *tasks): """ Interfaces the GraphNode `depends` method """ nodes = [x.node for x in tasks] self.node.depends(*nodes) return self
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alevinval/scheduling
scheduling/tasks.py
Task.then
def then(self, *tasks): """ Interfaces the GraphNode `then` method """ nodes = [x.node for x in tasks] self.node.then(*nodes) return self
python
def then(self, *tasks): """ Interfaces the GraphNode `then` method """ nodes = [x.node for x in tasks] self.node.then(*nodes) return self
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alevinval/scheduling
scheduling/tasks.py
Task.add
def add(self, *tasks): """ Interfaces the GraphNode `add` method """ nodes = [x.node for x in tasks] self.node.add(*nodes) return self
python
def add(self, *tasks): """ Interfaces the GraphNode `add` method """ nodes = [x.node for x in tasks] self.node.add(*nodes) return self
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alevinval/scheduling
scheduling/tasks.py
Task._run
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python
def _run(self): """ Run the task respecting dependencies """ for node in self.node.relatives: launch_node_task(node) for node in self.node.relatives: self.wait_and_join(node.task) if self.node.parent: while not self.node.parent.task.siblings_pe...
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svetlyak40wt/python-cl-conditions
docs/conf.py
read_version
def read_version(): """Read version from the first line starting with digit """ regex = re.compile('^(?P<number>\d.*?) .*$') with open('../CHANGELOG.rst') as f: for line in f: match = regex.match(line) if match: return match.group('number')
python
def read_version(): """Read version from the first line starting with digit """ regex = re.compile('^(?P<number>\d.*?) .*$') with open('../CHANGELOG.rst') as f: for line in f: match = regex.match(line) if match: return match.group('number')
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mitsei/dlkit
dlkit/json_/resource/managers.py
ResourceProfile.get_resource_record_types
def get_resource_record_types(self): """Gets all the resource record types supported. return: (osid.type.TypeList) - the list of supported resource record types *compliance: mandatory -- This method must be implemented.* """ # Implemented from template for ...
python
def get_resource_record_types(self): """Gets all the resource record types supported. return: (osid.type.TypeList) - the list of supported resource record types *compliance: mandatory -- This method must be implemented.* """ # Implemented from template for ...
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mitsei/dlkit
dlkit/json_/resource/managers.py
ResourceManager.get_resource_search_session_for_bin
def get_resource_search_session_for_bin(self, bin_id): """Gets a resource search session for the given bin. arg: bin_id (osid.id.Id): the ``Id`` of the bin return: (osid.resource.ResourceSearchSession) - ``a ResourceSearchSession`` raise: NotFound - ``bin_id`` not fo...
python
def get_resource_search_session_for_bin(self, bin_id): """Gets a resource search session for the given bin. arg: bin_id (osid.id.Id): the ``Id`` of the bin return: (osid.resource.ResourceSearchSession) - ``a ResourceSearchSession`` raise: NotFound - ``bin_id`` not fo...
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mitsei/dlkit
dlkit/json_/resource/managers.py
ResourceManager.get_resource_agent_session
def get_resource_agent_session(self): """Gets the session for retrieving resource agent mappings. return: (osid.resource.ResourceAgentSession) - a ``ResourceAgentSession`` raise: OperationFailed - unable to complete request raise: Unimplemented - ``supports_resource_ag...
python
def get_resource_agent_session(self): """Gets the session for retrieving resource agent mappings. return: (osid.resource.ResourceAgentSession) - a ``ResourceAgentSession`` raise: OperationFailed - unable to complete request raise: Unimplemented - ``supports_resource_ag...
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mitsei/dlkit
dlkit/json_/resource/managers.py
ResourceManager.get_resource_agent_assignment_session_for_bin
def get_resource_agent_assignment_session_for_bin(self, bin_id): """Gets a resource agent session for the given bin. arg: bin_id (osid.id.Id): the ``Id`` of the bin return: (osid.resource.ResourceAgentAssignmentSession) - a ``ResourceAgentAssignmentSession`` raise: N...
python
def get_resource_agent_assignment_session_for_bin(self, bin_id): """Gets a resource agent session for the given bin. arg: bin_id (osid.id.Id): the ``Id`` of the bin return: (osid.resource.ResourceAgentAssignmentSession) - a ``ResourceAgentAssignmentSession`` raise: N...
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mitsei/dlkit
dlkit/json_/resource/managers.py
ResourceManager.get_bin_admin_session
def get_bin_admin_session(self): """Gets the bin administrative session for creating, updating and deleteing bins. return: (osid.resource.BinAdminSession) - a ``BinAdminSession`` raise: OperationFailed - unable to complete request raise: Unimplemented - ``supports_bin_admin()`` is ``f...
python
def get_bin_admin_session(self): """Gets the bin administrative session for creating, updating and deleteing bins. return: (osid.resource.BinAdminSession) - a ``BinAdminSession`` raise: OperationFailed - unable to complete request raise: Unimplemented - ``supports_bin_admin()`` is ``f...
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mitsei/dlkit
dlkit/json_/resource/managers.py
ResourceManager.get_bin_hierarchy_session
def get_bin_hierarchy_session(self): """Gets the bin hierarchy traversal session. return: (osid.resource.BinHierarchySession) - ``a BinHierarchySession`` raise: OperationFailed - unable to complete request raise: Unimplemented - ``supports_bin_hierarchy()`` is ...
python
def get_bin_hierarchy_session(self): """Gets the bin hierarchy traversal session. return: (osid.resource.BinHierarchySession) - ``a BinHierarchySession`` raise: OperationFailed - unable to complete request raise: Unimplemented - ``supports_bin_hierarchy()`` is ...
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[ "Gets", "the", "bin", "hierarchy", "traversal", "session", "." ]
train
https://github.com/mitsei/dlkit/blob/445f968a175d61c8d92c0f617a3c17dc1dc7c584/dlkit/json_/resource/managers.py#L789-L804