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AllenDowney/ThinkBayes2
examples/geiger_soln.ipynb
mit
# Configure Jupyter so figures appear in the notebook %matplotlib inline # Configure Jupyter to display the assigned value after an assignment %config InteractiveShell.ast_node_interactivity='last_expr_or_assign' import numpy as np import pandas as pd # import classes from thinkbayes2 from thinkbayes2 import Pmf, Cd...
arongdari/almc
notebooks/freebase_subset_selector.ipynb
gpl-2.0
datafile = '../data/freebase/train_single_relation.txt' entities = set() relations = set() with open(datafile, 'r') as f: for line in f.readlines(): start, relation, end = line.split('\t') if start.strip() not in entities: entities.add(start.strip()) if end.strip() not in entiti...
PiercingDan/mat245
Labs/Lab5/lab5_assignment.ipynb
mit
from sklearn import datasets bost = datasets.load_boston() bost.keys() bost.data.shape """ Explanation: MAT245 Lab 5 - Linear Regression Overview Regression analysis is a set of statistical techniques for modelling the relationships between a dependent variable and a set of independent (or predictor) variables. Line...
Salman-H/mars-search-robot
.ipynb_checkpoints/Rover_Project_Test_Notebook-checkpoint.ipynb
bsd-2-clause
#%%HTML #<style> code {background-color : orange !important;} </style> %matplotlib inline #%matplotlib qt # Choose %matplotlib qt to plot to an interactive window import cv2 # OpenCV for perspective transform import numpy as np import matplotlib.image as mpimg import matplotlib.pyplot as plt import scipy.misc # For...
google/CFU-Playground
third_party/tflite-micro/tensorflow/lite/micro/examples/hello_world/train/train_hello_world_model.ipynb
apache-2.0
# Define paths to model files import os MODELS_DIR = 'models/' if not os.path.exists(MODELS_DIR): os.mkdir(MODELS_DIR) MODEL_TF = MODELS_DIR + 'model' MODEL_NO_QUANT_TFLITE = MODELS_DIR + 'model_no_quant.tflite' MODEL_TFLITE = MODELS_DIR + 'model.tflite' MODEL_TFLITE_MICRO = MODELS_DIR + 'model.cc' """ Explanation...
jasonjensen/Montreal-Python-Web
2.Python_Quickstart.ipynb
apache-2.0
# Assign value 1 to variable x x = 1 """ Explanation: Python Quickstart Workshop on Web Scraping and Text Processing with Python by Radhika Saksena, Princeton University, saksena@princeton.edu, radhika.saksena@gmail.com Disclaimer: The code examples presented in this workshop are for educational purposes only. Please ...
amcdawes/QMlabs
Lab 2 - Quantum States.ipynb
mit
import numpy as np from qutip import * """ Explanation: Lab 2 - Quantum States Useful for working examples and problems with photon quantum states. You may notice some similarity to the Jones Calculus ;-) End of explanation """ H = Qobj([[1],[0]]) V = Qobj([[0],[1]]) P45 = Qobj([[1/np.sqrt(2)],[1/np.sqrt(2)]]) M45 =...
InsightLab/data-science-cookbook
2020/05-geographic-information-system/Notebook_Network_Analysis.ipynb
mit
import osmnx as ox import matplotlib.pyplot as plt %matplotlib inline # Specify the name that is used to seach for the data place_name = "Brasil, Ceará, Fortaleza" # Fetch OSM street network from the location graph = ox.graph_from_place(place_name) type(graph) """ Explanation: Recuperando dados do OpenStreetMap O q...
michrawson/nyu_ml_lectures
notebooks/07.1 Case Study - Large Scale Text Classification.ipynb
cc0-1.0
from sklearn.feature_extraction.text import CountVectorizer vectorizer = CountVectorizer(min_df=1) vectorizer.fit([ "The cat sat on the mat.", ]) vectorizer.vocabulary_ """ Explanation: Large Scale Text Classification for Sentiment Analysis Scalability Issues The sklearn.feature_extraction.text.CountVectorizer a...
atlury/deep-opencl
DL0110EN/5.1.1dropoutPredictin.ipynb
lgpl-3.0
import torch import matplotlib.pyplot as plt import torch.nn as nn import torch.nn.functional as F import numpy as np from matplotlib.colors import ListedColormap """ Explanation: <div class="alert alert-block alert-info" style="margin-top: 20px"> <a href="http://cocl.us/pytorch_link_top"><img src = "http://cocl.us/P...
nick-youngblut/SIPSim
ipynb/bac_genome/n1147/.ipynb_checkpoints/atomIncorp_taxaIncorp_HMW-HR-SIP_run1-checkpoint.ipynb
mit
import os import glob import itertools import nestly %load_ext rpy2.ipython %load_ext pushnote %%R library(ggplot2) library(dplyr) library(tidyr) library(gridExtra) """ Explanation: Goal Follow-up to: atomIncorp_taxaIncorp Determining the effect of 'heavy' BD window (number of windows & window sizes) on HR-SIP accu...
mzszym/oedes
examples/scl/transient-with-trapping.ipynb
agpl-3.0
%matplotlib inline import matplotlib.pylab as plt from oedes import * init_notebook() """ Explanation: Transient space-charge-limited current with trapping This example shows how to run transient simulation of space-charge-limited diode. It considers a case of investigated in a classical paper. In the reference, an i...
theandygross/HIV_Methylation
Setup/DX_Imports.ipynb
mit
import os if os.getcwd().endswith('Setup'): os.chdir('..') import NotebookImport from Setup.Imports import * from scipy.special import logit logit_adj = lambda df: logit(df.clip(.001, .999)) """ Explanation: Helpers for Finding Differentially Methylated Probes End of explanation """ def boxplot_panel(hit_vec,...
omoju/Fundamentals
Data/data_Stats_4_ABTesting.ipynb
gpl-3.0
%pylab inline # Import libraries from __future__ import absolute_import, division, print_function # Ignore warnings import warnings #warnings.filterwarnings('ignore') import sys sys.path.append('tools/') import numpy as np import pandas as pd import scipy.stats as st # Graphing Libraries import matplotlib.pyplot a...
fonnesbeck/scientific-python-workshop
notebooks/Regression Modeling.ipynb
cc0-1.0
%matplotlib inline import numpy as np import pandas as pd import matplotlib.pyplot as plt import seaborn as sns sns.set() from scipy.optimize import fmin x = np.array([2.2, 4.3, 5.1, 5.8, 6.4, 8.0]) y = np.array([0.4, 10.1, 14.0, 10.9, 15.4, 18.5]) plt.plot(x,y,'ro') """ Explanation: Regression modeling A general, pr...
sgagnon/moore
notebooks/ObjFam Iterated Estimation of fMRI Data (LS-S).ipynb
bsd-3-clause
import pandas as pd import json from scipy import stats, signal, linalg from sklearn.decomposition import PCA import nibabel as nib import nipype from nipype import Node, SelectFiles, DataSink, IdentityInterface import matplotlib as mpl import matplotlib.pyplot as plt mpl.use("Agg") from nipype.interfaces import fsl fr...
newsapps/public-notebooks
Weekend shootings and homicides.ipynb
mit
import os import requests # Some constants NEWSROOMDB_URL = os.environ['NEWSROOMDB_URL'] # Utilities for loading data from NewsroomDB def get_table_url(table_name, base_url=NEWSROOMDB_URL): return '{}table/json/{}'.format(base_url, table_name) def get_table_data(table_name): url = get_table_url(table_name) ...
ES-DOC/esdoc-jupyterhub
notebooks/cnrm-cerfacs/cmip6/models/cnrm-cm6-1/aerosol.ipynb
gpl-3.0
# DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'cnrm-cerfacs', 'cnrm-cm6-1', 'aerosol') """ Explanation: ES-DOC CMIP6 Model Properties - Aerosol MIP Era: CMIP6 Institute: CNRM-CERFACS Source ID: CNRM-CM6-1 Topic: Aerosol Sub-Topics: Transport...
4dsolutions/Python5
PySummary1.ipynb
mit
lessons = { "1": "Python is part of a bigger ecosystem (example: Jupyter Notebooks).", "2": "Batteries Included refers to the well-stocked standard library.", "3": "Built-ins inside __builtins__ include the basic types such as...", "4": "__ribs__ == special names == magic methods (but not all are method...
planetlabs/notebooks
jupyter-notebooks/pixels-to-tabular-data/field_statistical_analysis.ipynb
apache-2.0
import datetime import json import os from pathlib import Path from pprint import pprint import shutil import time from zipfile import ZipFile import matplotlib.pyplot as plt import numpy as np import pandas as pd from planet import api from planet.api import downloader, filters import pyproj from rasterio import plot...
igabr/Metis_Projects_Chicago_2017
05-project-kojack/Notebook_4_DataFrame_Creation_Modeling.ipynb
mit
%run helper_functions.py %run filters.py %run plotly_functions.py import quandl from datetime import date from tabulate import tabulate from collections import Counter from IPython.display import Image import math import string %matplotlib inline plt.rcParams["figure.figsize"] = (15,10) plt.rcParams["xtick.labelsize"] ...
jagarzone6/cmos
notebooks/CMOS- Taller 6 de Octubre.ipynb
mit
from IPython.core.display import Image, display display(Image(url='images/taller-oct-6/fig-20-15.png')) """ Explanation: CMOS - Taller 6 de OCtubre Simulacion del circuito de la figura 20,15 (Beta-Multiplier) End of explanation """ from IPython.core.display import Image, display display(Image(url='images/taller-oct-...
matthiaskoenig/tellurium-web
api/api.ipynb
lgpl-3.0
BASE_URL = "http://127.0.0.1:8001" import os import coreapi import json import pandas as pd # some of the functionality requires authentication auth = coreapi.auth.BasicAuthentication( username='mkoenig', password=os.environ['DJANGO_ADMIN_PASSWORD'] ) client = coreapi.Client(auth=auth) # get the api scema do...
mldbai/mldb
container_files/demos/Recommending Movies.ipynb
apache-2.0
from pymldb import Connection mldb = Connection() """ Explanation: Recommending Movies The MovieLens 20M dataset contains 20 million user ratings from 1 to 5 of thousands of movies. In this demo we'll build a simple recommendation system which will use this data to suggest 25 movies based on a seed movie you provide. ...
SXBK/kaggle
mercedes-benz/Mercedes-Benz.ipynb
gpl-3.0
#Drop quantitative features for which most samples take 0 or 1 for cols in quan: if train_c[cols].mean() < 0.01 or train_c[cols].mean() > 0.99: train_c.drop(cols, inplace=True, axis=1) test_c.drop(cols, inplace=True, axis=1) #For now we only use the quantitative features left to make predictions qu...
essicolo/GCI733-A2015
isothermes.ipynb
mit
%pylab inline def freundlich(C, kp, b): S = kp*C**b return(S) def langmuir(C, Smax, kp): S = C*kp*Smax/(1+kp*C) return(S) conc = linspace(num = 11, start = 0, stop = 10, endpoint=True) S_freundlich1 = freundlich(C = conc, kp = 1, b = 0.1) S_freundlich2 = freundlich(C = conc, kp = 1, b = 0.5) S_freund...
kubeflow/pipelines
components/google-cloud/google_cloud_pipeline_components/experimental/tensorflow_probability/anomaly_detection/tfp_anomaly_detection.ipynb
apache-2.0
import os # The Google Cloud Notebook product has specific requirements IS_GOOGLE_CLOUD_NOTEBOOK = os.path.exists("/opt/deeplearning/metadata/env_version") # Google Cloud Notebook requires dependencies to be installed with '--user' USER_FLAG = "" if IS_GOOGLE_CLOUD_NOTEBOOK: USER_FLAG = "--user" ! pip3 install {...
neurodata/ndmg
tutorials/Tutorial_For_QA_Registration.ipynb
apache-2.0
import os import nibabel as nb import matplotlib.image as mpimg from m2g.utils.gen_utils import get_braindata, get_filename from m2g.utils.qa_utils import get_min_max, opaque_colorscale, pad_im from argparse import ArgumentParser from scipy import ndimage from matplotlib.colors import LinearSegmentedColormap from nilea...
ucsd-ccbb/jupyter-genomics
notebooks/rnaSeq/Functional_Enrichment_Analysis_Pathway_Visualization.ipynb
mit
#Import Python modules import os import pandas import qgrid import mygene #Change directory os.chdir("/data/test") """ Explanation: ToppGene & Pathway Visualization Authors: N. Mouchamel, L. Huang, T. Nguyen, K. Fisch Email: Kfisch@ucsd.edu Date: June 2016 Goal: Create Jupyter notebook that runs an enrichment analys...
GoogleCloudPlatform/tf-estimator-tutorials
08_Text_Analysis/06 - Part_2 - Text Classification - Hacker News - DNNClassifier with TF-Hub Sentence Embedding.ipynb
apache-2.0
import os class Params: pass # Set to run on GCP Params.GCP_PROJECT_ID = 'ksalama-gcp-playground' Params.REGION = 'europe-west1' Params.BUCKET = 'ksalama-gcs-cloudml' Params.PLATFORM = 'local' # local | GCP Params.DATA_DIR = 'data/news' if Params.PLATFORM == 'local' else 'gs://{}/data/news'.format(Params.BUCKE...
mne-tools/mne-tools.github.io
dev/_downloads/7ca3f34c286b629113cbb522edf26a21/75_cluster_ftest_spatiotemporal.ipynb
bsd-3-clause
# Authors: Denis Engemann <denis.engemann@gmail.com> # Jona Sassenhagen <jona.sassenhagen@gmail.com> # Alex Rockhill <aprockhill@mailbox.org> # Stefan Appelhoff <stefan.appelhoff@mailbox.org> # # License: BSD-3-Clause import numpy as np import matplotlib.pyplot as plt from mpl_toolkits.axes_...
thanhleviet/weed
1-Acquire.ipynb
mit
# Load the libraries import pandas as pd import numpy as np # Load the dataset df = pd.read_csv("data/Weed_Price.csv") # Shape of the dateset - rows & columns df.shape # Check for type of each variable df.dtypes # Lets load this again with date as date type df = pd.read_csv("data/Weed_Price.csv", parse_dates=[-1]) ...
GoogleCloudPlatform/rad-lab
modules/data_science/scripts/build/notebooks/Exploring_gnomad_on_BigQuery.ipynb
apache-2.0
# Import libraries import numpy as np import os """ Explanation: Sample Notebook for exploring gnomAD in BigQuery This notebook contains sample queries to explore the gnomAD dataset which is hosted through the Google Cloud Public Datasets Program. Setup If you just want to look at sample results, you can scroll down t...
rusucosmin/courses
ml/ex02/template/ex02.ipynb
mit
import datetime from helpers import * height, weight, gender = load_data(sub_sample=False, add_outlier=False) x, mean_x, std_x = standardize(height) y, tx = build_model_data(x, weight) y.shape, tx.shape """ Explanation: Load the data End of explanation """ def loss_mse(e): """Compute the Mean Square Error for ...
ES-DOC/esdoc-jupyterhub
notebooks/cccr-iitm/cmip6/models/sandbox-2/aerosol.ipynb
gpl-3.0
# DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'cccr-iitm', 'sandbox-2', 'aerosol') """ Explanation: ES-DOC CMIP6 Model Properties - Aerosol MIP Era: CMIP6 Institute: CCCR-IITM Source ID: SANDBOX-2 Topic: Aerosol Sub-Topics: Transport, Emissi...
cristhro/Machine-Learning
ejercicio 3/.ipynb_checkpoints/titanic-checkpoint.ipynb
gpl-3.0
%matplotlib inline import pandas as pd import numpy as np import random as rnd import seaborn as sns import matplotlib.pyplot as plt """ Explanation: Alumnos: Cristhian Rodriguez y Jesus Perucha Practica 3: Titanic End of explanation """ train_df = pd.read_csv('train.csv') test_df = pd.read_csv('test.csv') """ Exp...
mtambos/springleaf
Springleaf - preprocess - date columns.ipynb
mit
%pylab inline %load_ext autoreload %autoreload 2 from __future__ import division from collections import defaultdict, namedtuple import cPickle as pickle from datetime import datetime, timedelta import dateutil from functools import partial import inspect import json import os import re import sys import numpy as np...
MCardus/foodnet
graph_analytics/graph_analytics.ipynb
mit
#imports import networkx as nx import pandas as pd from itertools import combinations import matplotlib.pyplot as plt from matplotlib import pylab import sys from itertools import combinations import operator from operator import itemgetter from scipy import integrate # Exploring data recipes_df = pd.read_csv('../da...
svdwulp/da-programming-1
week_08_oefeningen_uitwerkingen.ipynb
gpl-2.0
n = 10000 steps_to_exit = [] for i in range(n): x = 0 steps = 0 while -7 < x < 7: x += np.random.choice([-1, 1]) # step left or right steps += 1 steps_to_exit.append(steps) print("Gemiddeld aantal stappen tot suiker: {:.3f}".format(mean(steps_to_exit))) """ Explanation: Oefening ...
mne-tools/mne-tools.github.io
dev/_downloads/f31e73ee907864d95a2b617fdc76b71e/source_label_time_frequency.ipynb
bsd-3-clause
# Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr> # # License: BSD-3-Clause import numpy as np import matplotlib.pyplot as plt import mne from mne import io from mne.datasets import sample from mne.minimum_norm import read_inverse_operator, source_induced_power print(__doc__) """ Explanation: Compute powe...
enakai00/jupyter_ml4se_commentary
04-Graph.ipynb
apache-2.0
import numpy as np import matplotlib.pyplot as plt import pandas as pd from pandas import Series, DataFrame from numpy.random import randint """ Explanation: グラフの描画 End of explanation """ dices = randint(1,7,(100, 2)) dices[:5] """ Explanation: 2個のサイコロを100回振った結果を保存 End of explanation """ total = np.sum(dices, a...
waltervh/BornAgain-tutorial
talks/day_1/python_introduction/BornAgainSchool_Basic.ipynb
gpl-3.0
import sys print(sys.version) """ Explanation: 1. Basic Python Types 1.1 Verifying the python version you are using End of explanation """ print(2 / 3) print(2 // 3) print(2 - 3) print(2 * 3) print(2 ** 3) print(12 % 5) """ Explanation: At this point anything above python 3.5 should be ok. 1.2 Perform basic operati...
scikit-optimize/scikit-optimize.github.io
dev/notebooks/auto_examples/interruptible-optimization.ipynb
bsd-3-clause
print(__doc__) import sys import numpy as np np.random.seed(777) import os """ Explanation: Interruptible optimization runs with checkpoints Christian Schell, Mai 2018 Reformatted by Holger Nahrstaedt 2020 .. currentmodule:: skopt Problem statement Optimization runs can take a very long time and even run for multiple ...
YuriyGuts/kaggle-quora-question-pairs
notebooks/feature-fuzzy.ipynb
mit
from pygoose import * """ Explanation: Feature: Fuzzy String Matching Calculate edit distances between each question pair (Levenshtein, Jaro, Jaro-Winkler, ...). Imports This utility package imports numpy, pandas, matplotlib and a helper kg module into the root namespace. End of explanation """ from fuzzywuzzy impor...
ComputationalModeling/spring-2017-danielak
past-semesters/spring_2016/day-by-day/day10-random-walks-and-random-numbers/Random_Walks_OLD_SOLUTIONS.ipynb
agpl-3.0
# put your code for Part 1 here. Add extra cells as necessary! %matplotlib inline import matplotlib.pyplot as plt import random import math import numpy as np n_trials = 1000 # number of trials (i.e., number of independent walks) n_steps = 100 # number of steps taken during each trial distances = [] # use this...
aidiary/notebooks
keras/170526-airline-passengers.ipynb
mit
%matplotlib inline import pandas import matplotlib.pyplot as plt dataset = pandas.read_csv('data/international-airline-passengers.csv', usecols=[1], engine='python', skipfooter=3) plt.plot(dataset) plt.show() dataset """ Explanation: Time Series Prediction with LSTM Recurrent Neural Networks...
TheMitchWorksPro/DataTech_Playground
Python_Misc/TMWP_DFBuilder_OO_PY/testing_and_documentation/TMWP_DFBuilder_GMapsSubClass_Module_Testing.ipynb
mit
# general libraries import pandas as pd ## required for Google Maps API code import os ## for larger data and/or make many requests in one day - get Google API key and use these lines: # os.environ["GOOGLE_API_KEY"] = "YOUR_GOOGLE_API_Key" ## for better security (PROD environments) - install key to server and use jus...
thalesians/tsa
src/jupyter/python/signatures.ipynb
apache-2.0
import os, sys sys.path.append(os.path.abspath('../../main/python')) import datetime as dt import numpy as np import pandas as pd import thalesians.tsa.signatures as signatures import importlib importlib.reload(signatures) """ Explanation: Time series signatures End of explanation """ df = pd.DataFrame( np.a...
albahnsen/ML_RiskManagement
exercises/04-CreditScoring.ipynb
mit
import pandas as pd pd.set_option('display.max_columns', 500) import zipfile with zipfile.ZipFile('../datasets/KaggleCredit2.csv.zip', 'r') as z: f = z.open('KaggleCredit2.csv') data = pd.read_csv(f, index_col=0) data.head() data.shape """ Explanation: Exercise 04 Logistic regression for credit scoring Banks ...
AllenDowney/ModSimPy
soln/chap21soln.ipynb
mit
# Configure Jupyter so figures appear in the notebook %matplotlib inline # Configure Jupyter to display the assigned value after an assignment %config InteractiveShell.ast_node_interactivity='last_expr_or_assign' # import functions from the modsim.py module from modsim import * """ Explanation: Modeling and Simulati...
clausherther/public
Rethinking - Andrew's Spinner.ipynb
cc0-1.0
data = pd.DataFrame([18, 19, 22, float(np.nan), float(np.nan), 19, 20, 22], columns=["frequency"]) k = len(data) p = 1/k k, p data missing_indeces = np.argwhere(np.isnan(data["frequency"])).flatten() missing_indeces """ Explanation: This notebook was inspired by this homework problem post by Richard McElreath: http...
benneely/qdact-basic-analysis
notebooks/comppheno.ipynb
gpl-3.0
import pickle import re dd = pickle.load(open('./python_scripts/02_data_dictionary_dict.p','rb')) #get all variables that begin with 'ESAS' and print variables = list(dd.keys()) variables.sort() pattern = r'\b' + re.escape('ESAS') symptoms = [variables[i] for i, x in enumerate(variables) if re.search(pattern, x)] print...
dirkseidensticker/CARD
Python/aDRACtoOxCal.ipynb
mit
%matplotlib inline from IPython.display import display import pandas as pd """ Explanation: Conversion to OxCal-compliant output Archives des datations radiocarbone d'Afrique centrale Dirk Seidensticker see: https://c14.arch.ox.ac.uk/embed.php?File=oxcal.html End of explanation """ df = pd.read_csv("https://raw.git...
nehal96/Deep-Learning-ND-Exercises
DCGAN/DCGAN.ipynb
mit
%matplotlib inline import pickle as pkl import matplotlib.pyplot as plt import numpy as np from scipy.io import loadmat import tensorflow as tf !mkdir data """ Explanation: Deep Convolutional GANs In this notebook, you'll build a GAN using convolutional layers in the generator and discriminator. This is called a De...
WNoxchi/Kaukasos
pytorch/LSTM GloVe dropout - PyTorch - incomplete.ipynb
mit
import pathlib import os import torchtext # from torchtext.data import Field from torchtext import data # import spacy import pandas as pd import numpy as np # from torchtext.data import TabularDataset """ Explanation: PyTorch LSTM: GloVe + dropout --- Incomplete This is a reimplementation of J.Howard's Improved LSTM ...
crocha700/UpperOceanSeasonality
notebooks/LLCProcessing.ipynb
cc0-1.0
import datetime import numpy as np import scipy as sp from scipy import interpolate import matplotlib.pyplot as plt %matplotlib inline import cmocean import seawater as sw from netCDF4 import Dataset from llctools import llc_model from pyspec import spectrum as spec c1 = 'slateblue' c2 = 'tomato' c3 = 'k' c4 = 'in...
lilleswing/deepchem
examples/tutorials/15_Training_a_Generative_Adversarial_Network_on_MNIST.ipynb
mit
!curl -Lo conda_installer.py https://raw.githubusercontent.com/deepchem/deepchem/master/scripts/colab_install.py import conda_installer conda_installer.install() !/root/miniconda/bin/conda info -e !pip install --pre deepchem import deepchem deepchem.__version__ """ Explanation: Tutorial Part 15: Training a Generative...
dereneaton/ipyrad
testdocs/analysis/cookbook-digest_genomes.ipynb
gpl-3.0
# conda install ipyrad -c conda-forge -c bioconda import ipyrad.analysis as ipa """ Explanation: <span style="color:gray">ipyrad-analysis toolkit: </span> digest genomes The purpose of this tool is to digest a genome file in silico using the same restriction enzymes that were used for an empirical data set to attempt...
skorokithakis/pythess-files
014 - Lorde/tao_mro/tao_of_python.ipynb
mit
two = 2 print(type(two)) print(type(type(two))) print(type(two).__bases__) print(dir(two)) """ Explanation: The Tao of Python The intricate relationship between "object" and "type" and how metaclasses, classes and instances are related <img src="figures/yin_yang.png" style="display:block;margin:auto;width:60%;"/> A...
UltronAI/Deep-Learning
CS231n/assignment1/features.ipynb
mit
import random import numpy as np from cs231n.data_utils import load_CIFAR10 import matplotlib.pyplot as plt from __future__ import print_function %matplotlib inline plt.rcParams['figure.figsize'] = (10.0, 8.0) # set default size of plots plt.rcParams['image.interpolation'] = 'nearest' plt.rcParams['image.cmap'] = 'gr...
kanhua/pypvcell
demos/dealing_with_spectrum_data.ipynb
apache-2.0
%matplotlib inline import numpy as np import scipy.constants as sc import matplotlib.pyplot as plt from pypvcell.spectrum import Spectrum from pypvcell.illumination import Illumination from pypvcell.photocurrent import gen_step_qe_array """ Explanation: Dealing with spectrum data This tutorial demonstrates how to use ...
csherwood-usgs/landlab
landlab/components/depth_dependent_cubic_soil_creep/tests/solution_for_4x7_grid_steady_state.ipynb
mit
D = 0.01 Sc = 0.8 Hstar = 0.5 E = 0.0001 P0 = 0.0002 """ Explanation: This notebook works out the expected hillslope sediment flux, topography, and soil thickness for steady state on a 4x7 grid. This provides "ground truth" values for tests. Let the hillslope erosion rate be $E$, the flux coefficient $D$, critical gra...
samuxiii/notebooks
simpsons/Simpsons-PyTorch.ipynb
apache-2.0
import os, random from scipy.misc import imread, imresize width = 0 lenght = 0 num_test_images = len(test_image_names) for i in range(num_test_images): path_file = os.path.join(test_root_path, test_image_names[i]) image = imread(path_file) width += image.shape[0] lenght += image.shape[1] width_mean =...
davidbrough1/pymks
notebooks/structure_md_2D.ipynb
mit
import pymks %matplotlib inline %load_ext autoreload %autoreload 2 import numpy as np import matplotlib.pyplot as plt from pymks_share import DataManager manager = DataManager('pymks.me.gatech.edu') X = manager.fetch_data('Molecular Dynamics') """ Explanation: Phase Transition in Molecular Dynamics Simulation...
louridas/rwa
content/notebooks/chapter_03.ipynb
bsd-2-clause
def create_pq(): return [] """ Explanation: Compressing Chapter 3 of Real World Algorithms. Panos Louridas<br /> Athens University of Economics and Business Huffman Encoding To implement Huffman encoding we need a priority queue. We will implement the priority queue as a min-heap. A min-heap is a complete binar...
kitu2007/dl_class
embeddings/Skip-Gram-word2vec.ipynb
mit
import time import numpy as np import tensorflow as tf import utils """ Explanation: Skip-gram word2vec In this notebook, I'll lead you through using TensorFlow to implement the word2vec algorithm using the skip-gram architecture. By implementing this, you'll learn about embedding words for use in natural language p...
InsightSoftwareConsortium/SimpleITK-Notebooks
Python/03_Image_Details.ipynb
apache-2.0
import SimpleITK as sitk # If the environment variable SIMPLE_ITK_MEMORY_CONSTRAINED_ENVIRONMENT is set, this will override the ReadImage # function so that it also resamples the image to a smaller size (testing environment is memory constrained). %run setup_for_testing %matplotlib inline import matplotlib.pyplot as ...
bwbadger/mifid2-rts
rts/Using sample trades in an SI calculation.ipynb
bsd-3-clause
# First we need to import the libraries we'll be needing import rts2_annex3 import pandas as pd import random random.seed() # Get the root of the RTS 2 Annex III taxonomy root = rts2_annex3.class_root # Get the Asset Class we would like to generate trades for asset_class = root.asset_class_by_name("Credit Derivative...
vlad17/vlad17.github.io
assets/2019-10-20-prngs.ipynb
apache-2.0
import numpy as np from multiprocessing import Pool from scipy.stats import ttest_1samp def something_random(_): return np.random.randn() n = 2056 print("stddev {:.5f}".format(1 / np.sqrt(n))) with Pool(4) as p: mu = np.mean(p.map(something_random, range(n))) mu """ Explanation: Numpy Gems, Part 2 Trying o...
ES-DOC/esdoc-jupyterhub
notebooks/test-institute-2/cmip6/models/sandbox-3/landice.ipynb
gpl-3.0
# DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'test-institute-2', 'sandbox-3', 'landice') """ Explanation: ES-DOC CMIP6 Model Properties - Landice MIP Era: CMIP6 Institute: TEST-INSTITUTE-2 Source ID: SANDBOX-3 Topic: Landice Sub-Topics: Gla...
mne-tools/mne-tools.github.io
0.23/_downloads/b2637a9801fb152d611a08a816cc5583/sensor_regression.ipynb
bsd-3-clause
# Authors: Tal Linzen <linzen@nyu.edu> # Denis A. Engemann <denis.engemann@gmail.com> # Jona Sassenhagen <jona.sassenhagen@gmail.com> # # License: BSD (3-clause) import pandas as pd import mne from mne.stats import linear_regression, fdr_correction from mne.viz import plot_compare_evokeds from mne.da...
shumway/srt_bootcamp
Mandelbrot_CPU_Example.ipynb
mit
import numpy as np import bokeh.plotting as bk bk.output_notebook() from numba import jit from timeit import default_timer as timer from IPython.html.widgets import interact, interact_manual, fixed, FloatText """ Explanation: CPU Acceleration of Mandelbrot Generation In this example we use numba to accelerate the gene...
mne-tools/mne-tools.github.io
0.22/_downloads/f760cc2f1a5d6c625b1e14a0b05176dd/plot_ecog.ipynb
bsd-3-clause
# Authors: Eric Larson <larson.eric.d@gmail.com> # Chris Holdgraf <choldgraf@gmail.com> # Adam Li <adam2392@gmail.com> # # License: BSD (3-clause) import pandas as pd import numpy as np import matplotlib.pyplot as plt import matplotlib.animation as animation import mne from mne.viz import plot_align...
CrowdTruth/CrowdTruth-core
tutorial/notebooks/Custom Platform - Multiple Choice Task - Person Type Annotation in Video.ipynb
apache-2.0
import pandas as pd test_data = pd.read_csv("../data/custom-platform-person-video-multiple-choice.csv") test_data.head() """ Explanation: CrowdTruth for Multiple Choice Tasks: Person Type Annotation in Video on a Custom Platform In this tutorial, we will apply CrowdTruth metrics to a multiple choice crowdsourcing tas...
GoogleCloudPlatform/asl-ml-immersion
notebooks/image_models/solutions/2_mnist_models_vertex.ipynb
apache-2.0
import os from datetime import datetime REGION = "us-central1" PROJECT = !(gcloud config get-value core/project) PROJECT = PROJECT[0] BUCKET = PROJECT MODEL_TYPE = "cnn" # "linear", "dnn", "dnn_dropout", or "cnn" # Do not change these os.environ["PROJECT"] = PROJECT os.environ["BUCKET"] = BUCKET os.environ["REGION"]...
TomTranter/OpenPNM
examples/tutorials/Working with Mixtures.ipynb
mit
import openpnm as op ws = op.Workspace() ws.settings['loglevel'] = 40 """ Explanation: Working with Mixtures In version 2.1, OpenPNM introduced a new Mixture class, which as the name suggests, combines the properties of several phases into a single mixture. The most common example would be diffusion of oxygen in air,...
VectorBlox/PYNQ
Pynq-Z1/notebooks/examples/pmod_oled.ipynb
bsd-3-clause
from pynq import Overlay from pynq.iop import Pmod_OLED from pynq.iop import PMODA ol = Overlay("base.bit") ol.download() pmod_oled = Pmod_OLED(PMODA) pmod_oled.clear() pmod_oled.write('Welcome to the\nPynq-Z1 board!') """ Explanation: Displaying text on a PmodOLED This demonstration shows how to display text on a ...
phuongxuanpham/SelfDrivingCar
CarND-Keras-Lab/traffic-sign-classification-with-keras.ipynb
gpl-3.0
from urllib.request import urlretrieve from os.path import isfile from tqdm import tqdm class DLProgress(tqdm): last_block = 0 def hook(self, block_num=1, block_size=1, total_size=None): self.total = total_size self.update((block_num - self.last_block) * block_size) self.last_block = b...
tritemio/PyBroMo
notebooks/PyBroMo - 4. Two-state dynamics - Static smFRET simulation.ipynb
gpl-2.0
%matplotlib inline from pathlib import Path import numpy as np import tables import matplotlib.pyplot as plt import seaborn as sns import pybromo as pbm import phconvert as phc print('Numpy version:', np.__version__) print('PyTables version:', tables.__version__) print('PyBroMo version:', pbm.__version__) print('phconv...
satishgoda/learning
web/coffeescript/coffeescript.ipynb
mit
from IPython.core.display import HTML, Javascript from IPython.core import display """ Explanation: About http://coffeescript.org https://en.wikipedia.org/wiki/Jeremy_Ashkenas https://en.wikipedia.org/wiki/CoffeeScript End of explanation """ !ls *b !coffee -v """ Explanation: Installed coffee script using npm Fol...
kinshuk4/MoocX
misc/deep_learning_notes/Ch2 Intro to Tensorflow/007 - tensorflow API exploration.ipynb
mit
import tensorflow as tf from pprint import pprint """ Explanation: Here we go through the API doc for tensorflow, and test various senarious out to get a better understanding of the mechanics of tensorflow End of explanation """ c = tf.constant(4.0) assert c.graph is tf.get_default_graph() g = tf.Graph() with g.as_...
marcus-nystrom/python_course
Week4_lecture.ipynb
gpl-3.0
import numpy as np import matplotlib.pyplot as plt # A first attempt (we ignore the target for now) image_size = (1280, 1024) # Size of background in pixels nDistractors = 10 # Number of distractors distractor_size = 500 # Generate positions where to put the distractors xr = np.random.randint(0, image_size[0], nDis...
ES-DOC/esdoc-jupyterhub
notebooks/csir-csiro/cmip6/models/sandbox-2/seaice.ipynb
gpl-3.0
# DO NOT EDIT ! from pyesdoc.ipython.model_topic import NotebookOutput # DO NOT EDIT ! DOC = NotebookOutput('cmip6', 'csir-csiro', 'sandbox-2', 'seaice') """ Explanation: ES-DOC CMIP6 Model Properties - Seaice MIP Era: CMIP6 Institute: CSIR-CSIRO Source ID: SANDBOX-2 Topic: Seaice Sub-Topics: Dynamics, Thermody...
tensorflow/docs-l10n
site/en-snapshot/tensorboard/graphs.ipynb
apache-2.0
#@title Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under...
ultiyuan/test0
lessons/yuan coursework.ipynb
gpl-2.0
import numpy from matplotlib import pyplot %matplotlib inline #Import the required functions from VortexPanel.py and BoundaryLayer.py from VortexPanel import Panel, solve_gamma, plot_flow, make_circle pyplot.figure(figsize=(10,6)) def c_p(gamma): return 1-gamma**2 def C_P(theta): return 1-4*(numpy.sin(theta))**2 N_r...
tpin3694/tpin3694.github.io
machine-learning/stemming_words.ipynb
mit
# Load library from nltk.stem.porter import PorterStemmer """ Explanation: Title: Stemming Words Slug: stemming_words Summary: How to stem words in unstructured text data for machine learning in Python. Date: 2016-09-09 12:00 Category: Machine Learning Tags: Preprocessing Text Authors: Chris Albon <a alt="Stemming Wo...
PyLCARS/PythonUberHDL
myHDL_DigLogicFundamentals/myHDL_Latches.ipynb
bsd-3-clause
import numpy as np import pandas as pd from sympy import * init_printing() from myhdl import * from myhdlpeek import * import random #python file of convince tools. Should be located with this notebook from sympy_myhdl_tools import * """ Explanation: \title{Digital Latches with myHDL} \author{Steven K Armour} \maket...
jdhp-docs/python-notebooks
python_numpy_fourier_transform_en.ipynb
mit
import numpy as np import matplotlib.pyplot as plt from matplotlib import cm """ Explanation: Fast Fourier Transform snippets Documentation Numpy implementation: http://docs.scipy.org/doc/numpy/reference/routines.fft.html Scipy implementation: http://docs.scipy.org/doc/scipy/reference/fftpack.html Import directives ...
blue-yonder/tsfresh
notebooks/examples/01 Feature Extraction and Selection.ipynb
mit
%matplotlib inline import matplotlib.pylab as plt from tsfresh import extract_features, extract_relevant_features, select_features from tsfresh.utilities.dataframe_functions import impute from tsfresh.feature_extraction import ComprehensiveFCParameters from sklearn.tree import DecisionTreeClassifier from sklearn.mod...
metpy/MetPy
v0.12/_downloads/9041777e133eed610f5b243c688e89f9/surface_declarative.ipynb
bsd-3-clause
from datetime import datetime, timedelta import cartopy.crs as ccrs import pandas as pd from metpy.cbook import get_test_data import metpy.plots as mpplots """ Explanation: Surface Analysis using Declarative Syntax The MetPy declarative syntax allows for a simplified interface to creating common meteorological analy...
Hyperparticle/graph-nlu
notebooks/dynamic_memory_1.ipynb
mit
# Import the necessary packages import pandas as pd import numpy as np import nltk from sklearn.metrics import accuracy_score # Download NLTK packages # An OS window should pop up for you to download the appropriate packages # Select all-nltk and click on the download button. Once download has finished exit the window...
DataPilot/notebook-miner
Notebook-miner test.ipynb
apache-2.0
from base_loader import base_loader """ Explanation: Notebook-miner tests This Notebook is meant to test the notebook-miner initial library (currently base_loader), making sure that we are able to import and use it as expected. End of explanation """ notebook_loaded = base_loader('example_notebooks/ML-Exercise2.ipyn...
ueapy/ueapy.github.io
content/notebooks/2017-10-30-pythonic-code.ipynb
mit
import this """ Explanation: Writing idiomatic python code the Zen of Python End of explanation """ if []: print('this is false') False # false is false [] # empty lists {} # empty dictionaries or sets "" # empty strings 0 # zero integers 0.00000 # zero floats None # None...
thempel/adaptivemd
examples/tutorial/1_example_setup_project.ipynb
lgpl-2.1
import sys, os """ Explanation: First we cover some basics about adaptive sampling to get you going. We will briefly talk about resources files generators how to run a simple trajectory Imports End of explanation """ from adaptivemd import Project """ Explanation: Alright, let's load the package and pick the Proj...
fja05680/pinkfish
examples/120.sell-short/strategy.ipynb
mit
import datetime import matplotlib.pyplot as plt import pandas as pd import pinkfish as pf # Format price data pd.options.display.float_format = '{:0.2f}'.format %matplotlib inline # Set size of inline plots '''note: rcParams can't be in same cell as import matplotlib or %matplotlib inline %matplotlib not...
brianray/puppy_dec_2015
PuPPy Dec 2015-Parts of Speech in Python.ipynb
apache-2.0
sent = "Each of us is full of shit in our own special way" # setup display for demo %matplotlib inline import os os.environ['DISPLAY'] = 'localhost:1' """ Explanation: ``` First, let's analyze some text... ... ``` “Each of us is full of shit in our own special way. We are all shitty little snowflakes dancing in the u...
gwsb-istm-6212-fall-2016/syllabus-and-schedule
exercises/exercise-03.ipynb
cc0-1.0
NAME = "dchud" COLLABORATORS = "" """ Explanation: Before you turn this problem in, make sure everything runs as expected. First, restart the kernel (in the menubar, select Kernel$\rightarrow$Restart) and then run all cells (in the menubar, select Cell$\rightarrow$Run All). Make sure you fill in any place that says YO...
ray-project/ray
doc/source/tune/examples/ax_example.ipynb
apache-2.0
# !pip install ray[tune] !pip install ax-platform==0.2.4 """ Explanation: Running Tune experiments with AxSearch In this tutorial we introduce Ax, while running a simple Ray Tune experiment. Tune’s Search Algorithms integrate with Ax and, as a result, allow you to seamlessly scale up a Ax optimization process - withou...
tensorflow/recommenders
docs/examples/sequential_retrieval.ipynb
apache-2.0
#@title Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under...
AnyBody-Research-Group/AnyPyTools
docs/Tutorial/01_Getting_started_with_anypytools.ipynb
mit
from anypytools import AnyPyProcess app = AnyPyProcess() """ Explanation: Getting Started with AnyPyTools Running a simple macro <img src="Tutorial_files/knee.gif" alt="Drawing" align="Right" width=120 /> For the sake of the tutorial we will use a small 'toy' model of a simplified knee joint (see the figure.) The mod...