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property_id
string
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string
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int32
software
string
method
string
energy
float64
atomic_forces
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float64
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float64
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float64
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cell
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PO_7899223062590412787261882
7899223062590412787261882075765833924132067814046655281272618081436246273387252830188115007587612954691986335228380495271326201970508752422028551719504406
2025-07-29T11:59:30
DS_bkm2tahmkd0o_0
1
ChIMES
DFT-PBE
-1,959.625197
[ [ -0.00015200072316628188, -0.00014800070413559024, -0.00014200067558955284 ], [ 0.00007800037109848676, 0.00006800032352175768, 0.00007500035682546804 ], [ 0.0002840013511791057, -0.00007500035682546804, 0.00028500135593677854 ], [ -0.0002710012893293579, 0.0...
[ [ 0.14988242674524488, 2.18452819405914e-7, 2.0596980115414753e-7 ], [ 2.18452819405914e-7, 0.1498824517112814, 2.7462640153886334e-7 ], [ 2.0596980115414753e-7, 2.7462640153886334e-7, 0.1498824579527905 ] ]
true
null
null
null
null
null
0.000412
0.000159
null
CO_6257181193013716250037260
6257181193013716250037260730362542608482463053981991631700515563323425653968925002912718429512527178669649469149372171897894125887967934220476744469050065
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[ true, true, true ]
C216
C
A
[ "C" ]
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216
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null
data/MD/8635/MD_6252150795882661912008635.json
data/MD/5677/MD_2452240083900118720225677.json
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{"case": "0", "class": "0", "cumul_frames": 25, "data_source": "DFT", "eff._alc": 1.0, "first_frame": 0, "good/bad": NaN, "input": {"energy_cutoff": "1000 eV"}, "labeling_method": "PBE", "last_frame": 24, "path": "/p/lustre2/rlindsey/ChIMES_Carbon-210317/generate_models-DFTBref/al_2+3+4b-O20_10_4-postMioPBE/ALC-2/refit_with_O20-10-4_rc_4.5_3.125_3.125-noVDW/all.novdw.OUTCAR-fixed-reDFT.xyzf ", "property_keys": {"atomic-forces": "forces", "cauchy-stress": "in header", "energy": "in header"}, "real_alc": 1.0, "rho_(gcc)": 3.67, "t_(k)": "3000", "total_frames": 25, "hash": "6252150795882661912008635704455744842650344565170471343407810221891690216009934893967076199395952759661245468474702193916784816165696567515546496466712789", "id": "MD_6252150795882661912008635"}
PO_5805784138492368482419736
5805784138492368482419736231641592183312296133292801055463936917396106631048236900407788470767893041681546458029062217748650094414732513049201791596916451
2025-07-29T11:59:30
DS_bkm2tahmkd0o_0
1
ChIMES
DFT-PBE
-1,959.292058
[ [ 0.0897764271248429, 0.08287139427311149, 0.08984742746263769 ], [ -0.2633802530711326, -0.26551126320973356, -0.2642022569819398 ], [ -0.0026860127791094287, -0.06586531336412604, -0.0029860142064113008 ], [ -0.1749798324928476, -0.014173067430498116, -0...
[ [ 0.15009588011584096, 0.00007826852443857607, 0.00007809376218305133 ], [ 0.00007826852443857607, 0.1500952622064375, 0.0000775819584347289 ], [ 0.00007809376218305133, 0.0000775819584347289, 0.15009554307434816 ] ]
true
null
null
null
null
null
0.457895
0.147614
null
CO_1006930047565632563341305
1006930047565632563341305776729312347162279816076044589706469125292246185946107437221288174077350673480154247961441969268193946704711644402963254882464973
13378428341296935341768611340009788354194846022040457474102397870258870870954622688228391948933249473878163120967234913233681259873802794131085582030345347
[ [ 10.539950876, 0, 0 ], [ 0, 10.539950876, 0 ], [ 0, 0, 10.539950876 ] ]
[ [ 0.43807, 0.43884, 0.438 ], [ 3.09717, 3.09749, 3.0972 ], [ 2.19944, 0.4475, 2.19944 ], [ 1.33226, 3.08007, 1.33217 ], [ 0.44684, 2.20032, 2.19923 ], [ 3.07941, 1.33231, 1.3321 ], [ 2.19933, 2.19963, 0.44689...
[ true, true, true ]
C216
C
A
[ "C" ]
[ 1 ]
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216
1
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null
data/MD/8635/MD_6252150795882661912008635.json
data/MD/5677/MD_2452240083900118720225677.json
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{"case": "0", "class": "0", "cumul_frames": 25, "data_source": "DFT", "eff._alc": 1.0, "first_frame": 0, "good/bad": NaN, "input": {"energy_cutoff": "1000 eV"}, "labeling_method": "PBE", "last_frame": 24, "path": "/p/lustre2/rlindsey/ChIMES_Carbon-210317/generate_models-DFTBref/al_2+3+4b-O20_10_4-postMioPBE/ALC-2/refit_with_O20-10-4_rc_4.5_3.125_3.125-noVDW/all.novdw.OUTCAR-fixed-reDFT.xyzf ", "property_keys": {"atomic-forces": "forces", "cauchy-stress": "in header", "energy": "in header"}, "real_alc": 1.0, "rho_(gcc)": 3.67, "t_(k)": "3000", "total_frames": 25, "hash": "6252150795882661912008635704455744842650344565170471343407810221891690216009934893967076199395952759661245468474702193916784816165696567515546496466712789", "id": "MD_6252150795882661912008635"}
PO_2457052218026065058977638
2457052218026065058977638477365292384298368737299218883367497615307444738892656214380966364257666090100046463302296032896219761731192556113085693603524220
2025-07-29T11:59:30
DS_bkm2tahmkd0o_0
1
ChIMES
DFT-PBE
-1,959.13509
[ [ -0.10303449020207033, 0.061200291169581915, -0.06633731560974764 ], [ 0.20080495535975046, 0.2583382290829458, 0.21793603686344504 ], [ 0.044034209499368794, 0.1612967673936092, 0.04250720223440227 ], [ 0.03531716802673407, 0.07581136068394077, 0.0060210...
[ [ 0.15057838622032652, 0.0008523779352853731, 0.0009328122633906306 ], [ 0.0008523779352853731, 0.15049093643596376, 0.0009397216139929833 ], [ 0.0009328122633906306, 0.0009397216139929833, 0.1506644503896633 ] ]
true
null
null
null
null
null
0.571993
0.203907
null
CO_4963753681955843654648071
4963753681955843654648071688179177693880885026082473398136653362995589746103260357861791961497159896581869863314799742761007195313543781394000304857709241
9031997298758714493139139424518340975950389598434892892367769849335704594717270432083305214602553612247324566862847833335381600492149215686491385087253040
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[ true, true, true ]
C216
C
A
[ "C" ]
[ 1 ]
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216
1
3
[ 1, 1, 1 ]
[ "ChIMES_C-2.0.Small_model_dataset__frame_range_0-24__index_2" ]
null
data/MD/8635/MD_6252150795882661912008635.json
data/MD/5677/MD_2452240083900118720225677.json
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{"class": "0", "phase": "diamond", "t_(k)": "3000", "hash": "2452240083900118720225677050502737394458232422889486919417284678444259595786556779646445215500210589137722743068634656018590958540427564829316520328521775", "id": "MD_2452240083900118720225677"}
{"case": "0", "class": "0", "cumul_frames": 25, "data_source": "DFT", "eff._alc": 1.0, "first_frame": 0, "good/bad": NaN, "input": {"energy_cutoff": "1000 eV"}, "labeling_method": "PBE", "last_frame": 24, "path": "/p/lustre2/rlindsey/ChIMES_Carbon-210317/generate_models-DFTBref/al_2+3+4b-O20_10_4-postMioPBE/ALC-2/refit_with_O20-10-4_rc_4.5_3.125_3.125-noVDW/all.novdw.OUTCAR-fixed-reDFT.xyzf ", "property_keys": {"atomic-forces": "forces", "cauchy-stress": "in header", "energy": "in header"}, "real_alc": 1.0, "rho_(gcc)": 3.67, "t_(k)": "3000", "total_frames": 25, "hash": "6252150795882661912008635704455744842650344565170471343407810221891690216009934893967076199395952759661245468474702193916784816165696567515546496466712789", "id": "MD_6252150795882661912008635"}
PO_1252707381392100576156909
12527073813921005761569092034561356849681418368464710754553322573818651482004991873139199785544859234038372721531704135199143443318753151674337184180654130
2025-07-29T11:59:30
DS_bkm2tahmkd0o_0
1
ChIMES
DFT-PBE
-1,926.14047
[ [ 0.3092044710867359, -0.2002129525432081, 0.2829443461502454 ], [ -1.871813905435936, -1.9139791060432139, -1.765746400803844 ], [ -1.0434629644318565, -0.6802182362404765, -1.0547630181935603 ], [ -1.3182192716262762, -2.229435606874921, -0.6786302286852...
[ [ 0.17008059315204307, 0.00021294156684775907, 0.006001086194354236 ], [ 0.00021294156684775907, 0.1701169124936466, 0.008578286452050068 ], [ 0.006001086194354236, 0.008578286452050068, 0.17421390149896762 ] ]
true
null
null
null
null
null
4.623943
1.608746
null
CO_6268861223201925773228958
626886122320192577322895853359077522292033277390325422464676180579477913981119249716731283044198709511451662674265110451824251673409612913245526085077743
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[ true, true, true ]
C216
C
A
[ "C" ]
[ 1 ]
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216
1
3
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null
data/MD/8635/MD_6252150795882661912008635.json
data/MD/5677/MD_2452240083900118720225677.json
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{"case": "0", "class": "0", "cumul_frames": 25, "data_source": "DFT", "eff._alc": 1.0, "first_frame": 0, "good/bad": NaN, "input": {"energy_cutoff": "1000 eV"}, "labeling_method": "PBE", "last_frame": 24, "path": "/p/lustre2/rlindsey/ChIMES_Carbon-210317/generate_models-DFTBref/al_2+3+4b-O20_10_4-postMioPBE/ALC-2/refit_with_O20-10-4_rc_4.5_3.125_3.125-noVDW/all.novdw.OUTCAR-fixed-reDFT.xyzf ", "property_keys": {"atomic-forces": "forces", "cauchy-stress": "in header", "energy": "in header"}, "real_alc": 1.0, "rho_(gcc)": 3.67, "t_(k)": "3000", "total_frames": 25, "hash": "6252150795882661912008635704455744842650344565170471343407810221891690216009934893967076199395952759661245468474702193916784816165696567515546496466712789", "id": "MD_6252150795882661912008635"}
PO_1003635425774835085940372
10036354257748350859403720848791504949026809799097209408869939434679987363573272047796861876045315462753337300311367362540944918264891864325547613011739555
2025-07-29T11:59:30
DS_bkm2tahmkd0o_0
1
ChIMES
DFT-PBE
-1,939.081947
[ [ 0.37951980562250637, 0.7822237215469015, 0.5510606217537168 ], [ -0.7679136534646022, -0.15562174039381552, -0.7427145335760026 ], [ -1.4030836753814295, 0.9555245460516164, -1.497792125971115 ], [ -0.6430050591931946, -1.2061677385242688, -0.53422154163...
[ [ 0.16645735341390394, 0.0028546852704143515, 0.0017743174897787148 ], [ 0.0028546852704143515, 0.16570526404725328, -0.0019497912773437966 ], [ 0.0017743174897787148, -0.0019497912773437966, 0.1658696029825378 ] ]
true
null
null
null
null
null
3.275908
1.522914
null
CO_1329861400476461779025626
13298614004764617790256260549677000474796871562774501758734073534683825138693577854489648065402240165074543808259853936127930776266906565792017224545373326
7880230025812353197117796173559717312376571366533432646976870810429026551429803765985818462015047450934467980259490818792789544768980045934743859775045173
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[ true, true, true ]
C216
C
A
[ "C" ]
[ 1 ]
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216
1
3
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null
data/MD/8635/MD_6252150795882661912008635.json
data/MD/5677/MD_2452240083900118720225677.json
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{"case": "0", "class": "0", "cumul_frames": 25, "data_source": "DFT", "eff._alc": 1.0, "first_frame": 0, "good/bad": NaN, "input": {"energy_cutoff": "1000 eV"}, "labeling_method": "PBE", "last_frame": 24, "path": "/p/lustre2/rlindsey/ChIMES_Carbon-210317/generate_models-DFTBref/al_2+3+4b-O20_10_4-postMioPBE/ALC-2/refit_with_O20-10-4_rc_4.5_3.125_3.125-noVDW/all.novdw.OUTCAR-fixed-reDFT.xyzf ", "property_keys": {"atomic-forces": "forces", "cauchy-stress": "in header", "energy": "in header"}, "real_alc": 1.0, "rho_(gcc)": 3.67, "t_(k)": "3000", "total_frames": 25, "hash": "6252150795882661912008635704455744842650344565170471343407810221891690216009934893967076199395952759661245468474702193916784816165696567515546496466712789", "id": "MD_6252150795882661912008635"}
PO_1020556832690619247012332
10205568326906192470123320434481154050054958216528514523646889950363525277571289835312520702089227330689552205000170151203266812498824774216758196724713959
2025-07-29T11:59:30
DS_bkm2tahmkd0o_0
1
ChIMES
DFT-PBE
-1,956.164797
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2025-07-29T11:59:30
DS_bkm2tahmkd0o_0
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2025-07-29T11:59:30
DS_bkm2tahmkd0o_0
1
ChIMES
DFT-PBE
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2025-07-29T11:59:30
DS_bkm2tahmkd0o_0
1
ChIMES
DFT-PBE
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2025-07-29T11:59:30
DS_bkm2tahmkd0o_0
1
ChIMES
DFT-PBE
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End of preview. Expand in Data Studio

Cite this dataset Lindsey, R. K., Goldman, N., and Fried, L. E. ChIMES C 2.0-Small 2025. ColabFit, 2025. https://doi.org/10.60732/ef8a9926

This dataset has been curated and formatted for the ColabFit Exchange

This dataset is also available on the ColabFit Exchange:

https://materials.colabfit.org/id/DS_bkm2tahmkd0o_0

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Dataset Name

ChIMES C 2.0-Small 2025

Description

The ChIMES C 2.0 Small dataset consists of initial structures of carbon calculated at the DFT level using VASP and trajectories produced using the ChIMES model. See links for the model code and ChIMES simulation evaluation library.

Dataset authors

Rebecca K. Lindsey, Nir Goldman, Laurence E. Fried

Publication

https://doi.org/10.1038/s41524-024-01497-y

License

CC-BY-4.0

Number of unique molecular configurations

601

Number of atoms

117976

Elements included

C

Properties included

energy, atomic forces, cauchy stress


Usage

  • ds.parquet : Aggregated dataset information.
  • co/ directory: Configuration rows each include a structure, calculated properties, and metadata.
  • cs/ directory : Configuration sets are subsets of configurations grouped by some common characteristic. If cs/ does not exist, no configurations sets have been defined for this dataset.
  • cs_co_map/ directory : The mapping of configurations to configuration sets (if defined).

ColabFit Exchange documentation includes descriptions of content and example code for parsing parquet files:

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