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float64
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PO_1001602134991212754755606
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2025-04-16T18:10:42
DS_8arvjtldu4fw_0
1
Quantum ESPRESSO
DFT-PBE
-23,075.41866
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H12Si214
H6Si107
A107B6
[ "H", "Si" ]
[ 0.05309734513274336, 0.9469026548672567 ]
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226
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[ "training_structures_divacancy_58" ]
null
data/MD/3457/MD_3592753035649081965693457.json
data/MD/0177/MD_6975474728105545870780177.json
null
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PO_4921110044302656655635827
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2025-04-16T18:11:19
DS_8arvjtldu4fw_0
1
Quantum ESPRESSO
DFT-PBE
-13,752.029099
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H18Si126
HSi7
A7B
[ "H", "Si" ]
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{"input": {"encut": {"value": 42, "units": "Ry"}, "kspacing": {"value": 0.2, "units": "Ang^-1"}}, "hash": "3592753035649081965693457215672852401445165267137394292685391428491274929020112919567349937673138123768489898693829296236882327256264852983877693996641003", "id": "MD_3592753035649081965693457"}
PO_4932130883239868035483111
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2025-04-16T21:12:44
DS_8arvjtldu4fw_0
1
Quantum ESPRESSO
DFT-PBE
-23,349.333871
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H8Si217
H8Si217
A217B8
[ "H", "Si" ]
[ 0.035555555555555556, 0.9644444444444444 ]
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225
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null
data/MD/3457/MD_3592753035649081965693457.json
data/MD/0825/MD_7929955026063253414840825.json
null
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PO_4959916223932929622926107
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2025-04-17T18:16:17
DS_8arvjtldu4fw_0
1
Quantum ESPRESSO
DFT-PBE
-46,826.846407
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H41Si432
H41Si432
A432B41
[ "H", "Si" ]
[ 0.08668076109936575, 0.9133192389006343 ]
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data/MD/3457/MD_3592753035649081965693457.json
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DS_8arvjtldu4fw_0
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2025-04-17T18:37:27
DS_8arvjtldu4fw_0
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2025-04-16T18:26:36
DS_8arvjtldu4fw_0
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2025-04-16T16:46:17
DS_8arvjtldu4fw_0
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null
data/MD/3457/MD_3592753035649081965693457.json
data/MD/3142/MD_6464123147842381366943142.json
null
"{\"energy-sigma\": 0.108, \"force-atom-sigma\": [0.1, 0.1, 0.101, 0.1, 0.1, 0.139, 0.1, 0.1, 0.1, 0(...TRUNCATED)
"{\"input\": {\"encut\": {\"value\": 42, \"units\": \"Ry\"}, \"kspacing\": {\"value\": 0.2, \"units\(...TRUNCATED)
PO_1053280282138495208024110
"105328028213849520802411088051157616828513590052168517687873033403762825446076062850696662240450675(...TRUNCATED)
2025-04-16T21:12:08
DS_8arvjtldu4fw_0
1
Quantum ESPRESSO
DFT-PBE
-13,751.260376
[[-0.16593168115692858,-0.15659162686042666,-0.12264018110787128],[-0.23648486802604804,0.7698151581(...TRUNCATED)
[[-14.084139458945195,1.2329330049748224,-0.88718988717765],[1.2329330049748224,10.020026961065222,-(...TRUNCATED)
true
null
null
null
null
null
2.658383
0.97437
null
CO_9861860629110800630488596
"986186062911080063048859691015859143676062653080723770623624652940105465658473818389638268163972068(...TRUNCATED)
"111328119941670937804591640609791656614976197763921246633734263742659947800363226120282681834795257(...TRUNCATED)
[ [ 11.5187545121, 0, 0 ], [ 0, 19.951070271437317, 0 ], [ 0, 0, 30.916256479194814 ] ]
[[10.125607228879552,15.944713834576596,9.206892102752578],[4.705653112037604,0.25937931410346776,8.(...TRUNCATED)
[ true, true, true ]
H18Si126
HSi7
A7B
[ "H", "Si" ]
[ 0.125, 0.875 ]
[14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,14,(...TRUNCATED)
144
2
3
[ 1, 1, 1 ]
[ "training_structures_diamond111_390" ]
null
data/MD/3457/MD_3592753035649081965693457.json
data/MD/4355/MD_4101584733747289551794355.json
null
"{\"energy-sigma\": 0.07200000000000001, \"force-atom-sigma\": [0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0(...TRUNCATED)
"{\"input\": {\"encut\": {\"value\": 42, \"units\": \"Ry\"}, \"kspacing\": {\"value\": 0.2, \"units\(...TRUNCATED)
End of preview. Expand in Data Studio

Cite this dataset Unruh, D., Meidanshahi, R. V., Goodnick, S. M., Csányi, G., and Zimányi, G. T. Si-H-GAP training. ColabFit, 2023. https://doi.org/10.60732/43a0cef7

This dataset has been curated and formatted for the ColabFit Exchange

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Dataset Name

Si-H-GAP training

Description

A set of training configurations of hydrogenated liquid and amorphous silicon from the datasets for Si-H-GAP. Includes virial sigmas used for configurations used in the corresponding publication (virial-sigma-paper) as well as an alternate configuration defined by doubled virial sigma prefactors (from 0.025 to 0.05).

Dataset authors

Davis Unruh, Reza Vatan Meidanshahi, Stephen M. Goodnick, Gábor Csányi, Gergely T. Zimányi

Publication

https://doi.org/10.1103/PhysRevMaterials.6.065603

Original data link

https://github.com/dgunruh/Si-H-GAP

License

CC-BY-4.0

Number of unique molecular configurations

392

Number of atoms

65909

Elements included

H, Si

Properties included

energy, atomic forces, cauchy stress


Usage

  • ds.parquet : Aggregated dataset information.
  • co/ directory: Configuration rows each include a structure, calculated properties, and metadata.
  • cs/ directory : Configuration sets are subsets of configurations grouped by some common characteristic. If cs/ does not exist, no configurations sets have been defined for this dataset.
  • cs_co_map/ directory : The mapping of configurations to configuration sets (if defined).

ColabFit Exchange documentation includes descriptions of content and example code for parsing parquet files:

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