Update README.md
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by cengc13 - opened
README.md
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data_files: rQM9.parquet
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license: cc-by-4.0
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tags:
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- materials discovery
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- DFT
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---
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### Dataset Name
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### Description
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133885 molecular structures from the QM9 with
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Bond information can be gathered from the `metadata` column of the parquet file, a map where the key `bonds` contains the bond indices as they appear in the final rows of an SDF molecule block. If additional charges are present, these are contained under the key `charge_info`.
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The original
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The rQM9 SDF file is derived from DeepChem's QM9 dataset and rectifies the original dataset's net-charge discrepancies and invalid bond orders by enforcing correct valency-charge configurations.
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Nevertheless, a subset of molecules
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The zero-based indices of these unresolved molecules are provided in a NumPy file in the directory `original_file`.
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### License
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data_files: rQM9.parquet
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license: cc-by-4.0
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tags:
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- chemical discovery
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- materials discovery
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- DFT
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- SDF Data
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pretty_name: rQM9_SDF_Data
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---
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### Dataset Name
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rQM9_SDF_Data
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### Description
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133885 molecular structures from the QM9 with revised bond and charges in the SDF format.
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Bond information can be gathered from the `metadata` column of the parquet file, a map where the key `bonds` contains the bond indices as they appear in the final rows of an SDF molecule block. If additional charges are present, these are contained under the key `charge_info`.
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The original SDF file is stored in the directory `original_file`
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The rQM9 SDF file is derived from DeepChem's QM9 SDF dataset and rectifies the original dataset's net-charge discrepancies and invalid bond orders by enforcing correct valency-charge configurations.
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Nevertheless, a subset of molecules remains problematic, as they either fail RDKit sanitization or fragment into multiple components.
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The zero-based indices of these unresolved molecules are provided in a NumPy file in the directory `original_file`.
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### License
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