tax_id
int64 7
3.42M
| name_txt
large_stringlengths 5
74
| name_class
large_stringclasses 2
values | short_genus
large_stringlengths 4
66
|
|---|---|---|---|
7
|
Azorhizobium caulinodans
|
scientific name
|
A. caulinodans
|
9
|
Buchnera aphidicola
|
scientific name
|
B. aphidicola
|
11
|
Cellulomonas gilvus
|
scientific name
|
C. gilvus
|
11
|
Cellvibrio gilvus
|
synonym
|
C. gilvus
|
14
|
Dictyoglomus thermophilum
|
scientific name
|
D. thermophilum
|
17
|
Methylomonas clara
|
synonym
|
M. clara
|
17
|
Methylophilus methylotrophus
|
scientific name
|
M. methylotrophus
|
17
|
Methylotrophus methylophilus
|
synonym
|
M. methylophilus
|
19
|
Pelobacter carbinolicus
|
synonym
|
P. carbinolicus
|
19
|
Syntrophotalea carbinolica
|
scientific name
|
S. carbinolica
|
21
|
Phenylobacterium immobile
|
scientific name
|
P. immobile
|
23
|
Alteromonas colwelliana
|
synonym
|
A. colwelliana
|
23
|
Shewanella affinis
|
synonym
|
S. affinis
|
23
|
Shewanella colwelliana
|
scientific name
|
S. colwelliana
|
24
|
Alteromonas putrefaciens
|
synonym
|
A. putrefaciens
|
24
|
Pseudomonas putrefaciens
|
synonym
|
P. putrefaciens
|
24
|
Shewanella putrefaciens
|
scientific name
|
S. putrefaciens
|
25
|
Alteromonas hanedai
|
synonym
|
A. hanedai
|
25
|
Shewanella hanedai
|
scientific name
|
S. hanedai
|
33
|
Micrococcus fulvus
|
synonym
|
M. fulvus
|
33
|
Myxococcus fulvus
|
scientific name
|
M. fulvus
|
34
|
Myxococcus xanthus
|
scientific name
|
M. xanthus
|
35
|
Chondrococcus macrosporus
|
synonym
|
C. macrosporus
|
35
|
Corallococcus macrosporus
|
scientific name
|
C. macrosporus
|
35
|
Myxococcus macrosporus
|
synonym
|
M. macrosporus
|
38
|
Angiococcus disciformis
|
synonym
|
A. disciformis
|
38
|
Archangium disciforme
|
scientific name
|
A. disciforme
|
38
|
Cystobacter disciformis
|
synonym
|
C. disciformis
|
38
|
Myxococcus disciformis
|
synonym
|
M. disciformis
|
41
|
Chondromyces aurantiacus
|
synonym
|
C. aurantiacus
|
41
|
Stigmatella aurantiaca
|
scientific name
|
S. aurantiaca
|
43
|
Cystobacter fuscus
|
scientific name
|
C. fuscus
|
43
|
Polyangium fuscum
|
synonym
|
P. fuscum
|
45
|
Chondromyces gracilipes
|
synonym
|
C. gracilipes
|
45
|
Chondromyces lichenicolus
|
synonym
|
C. lichenicolus
|
45
|
Chondromyces minor
|
synonym
|
C. minor
|
45
|
Melittangium lichenicola
|
scientific name
|
M. lichenicola
|
45
|
Podangium gracilipes
|
synonym
|
P. gracilipes
|
45
|
Podangium lichenicolum
|
synonym
|
P. lichenicolum
|
48
|
Archangium gephyra
|
scientific name
|
A. gephyra
|
48
|
Chondrococcus cerebriformis
|
synonym
|
C. cerebriformis
|
48
|
Chondromyces serpens
|
synonym
|
C. serpens
|
48
|
Myxococcus cerebriformis
|
synonym
|
M. cerebriformis
|
51
|
Chondromyces apiculatus
|
scientific name
|
C. apiculatus
|
52
|
Chondromyces crocatus
|
scientific name
|
C. crocatus
|
52
|
Myxobotrys variabilis
|
synonym
|
M. variabilis
|
54
|
Nannocystis exedens
|
scientific name
|
N. exedens
|
56
|
Polyangium cellulosum
|
synonym
|
P. cellulosum
|
56
|
Polyangium compositum
|
synonym
|
P. compositum
|
56
|
Sorangium cellulosum
|
scientific name
|
S. cellulosum
|
56
|
Sorangium compositum
|
synonym
|
S. compositum
|
56
|
Sorangium nigrescens
|
synonym
|
S. nigrescens
|
56
|
Sorangium nigrum
|
synonym
|
S. nigrum
|
61
|
Vitreoscilla stercoraria
|
scientific name
|
V. stercoraria
|
62
|
Vitreoscilla beggiatoides
|
scientific name
|
V. beggiatoides
|
63
|
Vitreoscilla filiformis
|
scientific name
|
V. filiformis
|
65
|
Herpetosiphon aurantiacus
|
scientific name
|
H. aurantiacus
|
69
|
Lysobacter enzymogenes
|
scientific name
|
L. enzymogenes
|
72
|
Caryophanon muelleri
|
synonym
|
C. muelleri
|
72
|
Simonsiella muelleri
|
scientific name
|
S. muelleri
|
83
|
Hyphomicrobium vulgare
|
scientific name
|
H. vulgare
|
84
|
Hyphomicrobium methylovorum
|
scientific name
|
H. methylovorum
|
86
|
Hyphomonas jannaschiana
|
scientific name
|
H. jannaschiana
|
89
|
Leptothrix crassa
|
synonym
|
L. crassa
|
89
|
Leptothrix discophora
|
scientific name
|
L. discophora
|
89
|
Megalothrix discophora
|
synonym
|
M. discophora
|
94
|
Stella humosa
|
scientific name
|
S. humosa
|
97
|
Chlamydothrix ferruginea
|
synonym
|
C. ferruginea
|
97
|
Gallionella ferruginea
|
scientific name
|
G. ferruginea
|
97
|
Spirillum ferrugineum
|
synonym
|
S. ferrugineum
|
97
|
Spirophyllum ferrugineum
|
synonym
|
S. ferrugineum
|
100
|
Ancylobacter aquaticus
|
scientific name
|
A. aquaticus
|
100
|
Microcyclus aquaticus
|
synonym
|
M. aquaticus
|
102
|
Flectobacillus glomeratus
|
synonym
|
F. glomeratus
|
102
|
Polaribacter glomeratus
|
scientific name
|
P. glomeratus
|
103
|
Flectobacillus major
|
scientific name
|
F. major
|
103
|
Microcyclus major
|
synonym
|
M. major
|
104
|
Cyclobacterium marinum
|
scientific name
|
C. marinum
|
104
|
Cyclobacterium marinus
|
synonym
|
C. marinus
|
104
|
Flectobacillus marinus
|
synonym
|
F. marinus
|
104
|
Microcyclus marinus
|
synonym
|
M. marinus
|
106
|
Runella slithyformis
|
scientific name
|
R. slithyformis
|
108
|
Spirosoma linguale
|
scientific name
|
S. linguale
|
110
|
Blastobacter viscosus
|
synonym
|
B. viscosus
|
110
|
Xanthobacter viscosus
|
scientific name
|
X. viscosus
|
114
|
Gemmata obscuriglobus
|
scientific name
|
G. obscuriglobus
|
119
|
Planctomyces brasiliensis
|
synonym
|
P. brasiliensis
|
119
|
Rubinisphaera brasiliensis
|
scientific name
|
R. brasiliensis
|
120
|
Planctomyces limnophilus
|
synonym
|
P. limnophilus
|
120
|
Planctopirus limnophila
|
scientific name
|
P. limnophila
|
120
|
Planctopirus limnophilus
|
synonym
|
P. limnophilus
|
122
|
Gimesia maris
|
scientific name
|
G. maris
|
124
|
Blastopirellula marina
|
scientific name
|
B. marina
|
124
|
Pirellula marina
|
synonym
|
P. marina
|
125
|
Pirellula staleyi
|
scientific name
|
P. staleyi
|
128
|
Isocystis pallida
|
synonym
|
I. pallida
|
128
|
Isosphaera pallida
|
scientific name
|
I. pallida
|
128
|
Torulopsidosira pallida
|
synonym
|
T. pallida
|
132
|
Tuberoidobacter mutans
|
scientific name
|
T. mutans
|
134
|
Methylocystis parvus
|
scientific name
|
M. parvus
|
End of preview. Expand
in Data Studio
The code used to generate the dataset is available at https://github.com/ChemBioHTP/EnzyExtract/blob/main/enzyextract/thesaurus/organism/ncbi_taxonomy.py.
The data comes from NCBI; see https://ftp.ncbi.nih.gov/pub/taxonomy/.
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