Datasets:

danielnobbe
/

mr-rate

license: cc-by-nc-sa-4.0
task_categories:
  - image-to-text
  - text-to-image
  - image-classification
tags:
  - brain-mri
  - multiparametric-mri
  - mpmri
  - radiology
  - 3d-medical-imaging
pretty_name: MR-RATE
size_categories:
  - 10K<n<100K
configs:
  - config_name: default
    data_files:
      - split: train
        path: train/*/*.parquet
      - split: validation
        path: val/*.parquet
  - config_name: traindevval
    data_files:
      - split: train
        path: train/0/*.parquet
      - split: dev
        path: train/1/*.parquet
      - split: val
        path: val/*.parquet

Conversion of Forithmus/MR-RATE to Parquet:

Inserted all images ('series') into the row of their corresponding study, along with metadata, into the images column.
Allows iterating over the rows, and reading the images (as nifti_bytes) along with their report text. Limited number of files to ~11k instead of the ~800k in the original repo. A smaller version of this dataset, for debugging purposes, is available under danielnobbe/mr-rate-toy-4000.

NOTE: The images in this repo are the ones from the base MR-RATE dataset, not any of the registered versions. The registered images typically are resampled, and larger than the original images.