ckg-benchmark / README.md
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metadata
license: cc-by-4.0
task_categories:
  - question-answering
  - text-retrieval
tags:
  - knowledge-graph
  - rag
  - retrieval
  - benchmark
  - llm
  - knowledge-representation
language:
  - en
pretty_name: CKG Benchmark
size_categories:
  - 10K<n<100K
configs:
  - config_name: domain_graphs
    data_files:
      - path: domains/*/learning-graph.csv
        split: train
  - config_name: results
    data_files:
      - path: results/*.csv
        split: train
  - config_name: queries
    data_files:
      - path: queries/*.jsonl
        split: train

CKG Benchmark

Pre-structured knowledge graphs outperform RAG by 4× F1 at 11× lower token cost — across 47 benchmarked domains.

System Macro F1 Tokens/query RDS Run Cost
CKG 0.4709 269 0.00175 $7.81
RAG 0.1231 2,982 0.0000413 $76.23
GraphRAG 0.1200 3,450 0.0000452 $44.43

42× more intelligence per token than RAG. Zero hallucinations by construction.

Dataset Contents

domains/{domain}/learning-graph.csv   — structured DAG (ConceptID, ConceptLabel, Dependencies, TaxonomyID)
queries/queries_{domain}.jsonl        — 7,928 benchmark queries (T1–T5 types)
results/                              — per-system JSONL results + summary CSVs

Domain Library (52 total)

Benchmarked Educational Domains (47)

Domain Category
algebra-1 Mathematics
asl-book Language
automating-instructional-design Education Technology
bioinformatics Life Sciences
biology Life Sciences
blockchain Computer Science
calculus Mathematics
chemistry Natural Science
circuits Engineering
claude-skills AI / LLM
computer-science Computer Science
conversational-ai AI / LLM
data-science-course Data Science
dementia Healthcare
digital-citizenship Social / Civic
digital-electronics Engineering
ecology Natural Science
economics-course Social Science
ethics-course Philosophy
fft-benchmarking Signal Processing
functions Mathematics
genetics Life Sciences
geometry-course Mathematics
glp1-obesity Healthcare / Pharma
infographics Design / Communication
intro-to-graph Computer Science
intro-to-physics-course Natural Science
it-management-graph IT Management
learning-linux Computer Science
linear-algebra Mathematics
machine-learning-textbook AI / Machine Learning
microsims Education Technology
modeling-healthcare-data Healthcare Analytics
moss Biology / Botany
organizational-analytics Business Analytics
personal-finance Finance
pre-calc Mathematics
prompt-class AI / LLM
quantum-computing Computer Science
reading-for-kindergarten Education
signal-processing Engineering
statistics-course Data Science
systems-thinking Systems Science
theory-of-knowledge Philosophy
tracking-ai-course AI / LLM
unicorns Business / Finance
us-geography Geography

Enterprise Domains (5, unbenchmarked — community contribution)

Domain Category Concepts
payer-formulary Healthcare Payer Analytics 75
drug-interactions Clinical Pharmacology 70
icd10-metabolic Medical Coding 70
cpt-em-coding Medical Billing 80
hipaa-compliance Healthcare Compliance 75

Query Types

Type Description Example
T1 Entity lookup "What is Composite Function?"
T2 Direct dependency "What are the prerequisites for Implicit Differentiation?"
T3 Multi-hop path "What is the prerequisite chain from Function to Taylor Series?"
T4 Category aggregate "List all FOUND concepts"
T5 Cross-concept relationship "How does Domain and Range relate to Inverse Function?"

Two-Track Design

Track 1 — McCreary Intelligent Textbook Corpus 44 open-source educational domains. Hand-authored learning-graph CSVs. STEM, Professional, Foundational.

Track 2 — Pipeline-Generated Commercial Domain GLP-1/Obesity pharmacology assembled from ClinicalTrials.gov API in one session. No expert curation. CKG F1 = 0.5298 — exceeds hand-curated average.

Key Finding: CKG improves with hop depth, RAG plateaus

hop depth CKG F1 RAG F1
0 0.374 0.073
1 0.519 0.066
2 0.573 0.226
3 0.671 0.138
4 0.751 0.166
5 0.772 0.170

Novel Metrics

  • RDS (Retrieval Density Score) = F1 / tokens_consumed — intelligence per token
  • Hop-Depth F1 — multi-hop reasoning quality vs. chain length
  • CPCA — cost per correct answer

Citation

@misc{yarmoluk2026ckg,
  title={Benchmarking Knowledge Retrieval Architectures Across Educational
         and Commercial Domains: RAG, GraphRAG, and Compact Knowledge Graphs},
  author={Yarmoluk, Daniel and McCreary, Dan},
  year={2026},
  note={Pre-print in preparation. v0.6.2. Patent pending App #64/040,804.}
}

Links

License

  • Dataset: CC BY 4.0
  • Source learning graphs: MIT (McCreary Intelligent Textbooks)
  • Enterprise domains: CC BY 4.0