schema stringclasses 471
values | key stringlengths 0 203 | description stringlengths 0 4.37k | object stringlengths 2 322k |
|---|---|---|---|
meta.schema.json | aliases | Alternate names/labels for the element. These do not alter the semantics of the schema, but may be useful to support search and alignment. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | alt_descriptions | A sourced alternative description for an element | {"additionalProperties": {"anyOf": [{}, {"type": "string"}]}, "type": "object"} |
meta.schema.json | additionalProperties | text of an attributed description | {"type": "string"} |
meta.schema.json | annotations | a collection of tag/text tuples with the semantics of OWL Annotation | {"additionalProperties": {}, "type": "object"} |
meta.schema.json | broad_mappings | A list of terms from different schemas or terminology systems that have broader meaning. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | categories | Controlled terms used to categorize an element. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | classes | An index to the collection of all class definitions in the schema | {"additionalProperties": {"anyOf": [{}, {"type": "null"}]}, "type": "object"} |
meta.schema.json | close_mappings | A list of terms from different schemas or terminology systems that have close meaning. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | comments | notes and comments about an element intended primarily for external consumption | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | conforms_to | An established standard to which the element conforms. | {"type": "string"} |
meta.schema.json | contributors | agent that contributed to the element | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | created_by | agent that created the element | {"type": "string"} |
meta.schema.json | created_on | time at which the element was created | {"format": "date-time", "type": "string"} |
meta.schema.json | default_curi_maps | ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | default_prefix | The prefix that is used for all elements within a schema | {"type": "string"} |
meta.schema.json | default_range | default slot range to be used if range element is omitted from a slot definition | {"type": "string"} |
meta.schema.json | definition_uri | The native URI of the element. This is always within the namespace of the containing schema. Contrast with the assigned URI, via class_uri or slot_uri | {"type": "string"} |
meta.schema.json | deprecated | Description of why and when this element will no longer be used | {"type": "string"} |
meta.schema.json | deprecated_element_has_exact_replacement | When an element is deprecated, it can be automatically replaced by this uri or curie | {"type": "string"} |
meta.schema.json | deprecated_element_has_possible_replacement | When an element is deprecated, it can be potentially replaced by this uri or curie | {"type": "string"} |
meta.schema.json | description | a textual description of the element's purpose and use | {"type": "string"} |
meta.schema.json | emit_prefixes | a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | enums | An index to the collection of all enum definitions in the schema | {"additionalProperties": {"anyOf": [{}, {"type": "null"}]}, "type": "object"} |
meta.schema.json | exact_mappings | A list of terms from different schemas or terminology systems that have identical meaning. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | examples | example usages of an element | {"items": {}, "type": "array"} |
meta.schema.json | extensions | a tag/text tuple attached to an arbitrary element | {"additionalProperties": {}, "type": "object"} |
meta.schema.json | from_schema | id of the schema that defined the element | {"type": "string"} |
meta.schema.json | generation_date | date and time that the schema was loaded/generated | {"format": "date-time", "type": "string"} |
meta.schema.json | id | The official schema URI | {"type": "string"} |
meta.schema.json | id_prefixes | An allowed list of prefixes for which identifiers must conform. The identifier of this class or slot must begin with the URIs referenced by this prefix | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | implements | An element in another schema which this element conforms to. The referenced element is not imported into the schema for the implementing element. However, the referenced schema may be used to check conformance of the implementing element. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | imported_from | the imports entry that this element was derived from. Empty means primary source | {"type": "string"} |
meta.schema.json | imports | A list of schemas that are to be included in this schema | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | in_language | the primary language used in the sources | {"type": "string"} |
meta.schema.json | in_subset | used to indicate membership of a term in a defined subset of terms used for a particular domain or application. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | instantiates | An element in another schema which this element instantiates. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | keywords | Keywords or tags used to describe the element | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | last_updated_on | time at which the element was last updated | {"format": "date-time", "type": "string"} |
meta.schema.json | license | license for the schema | {"type": "string"} |
meta.schema.json | additionalProperties | a name assigned to an element in a given ontology | {"type": "string"} |
meta.schema.json | mappings | A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | metamodel_version | Version of the metamodel used to load the schema | {"type": "string"} |
meta.schema.json | modified_by | agent that modified the element | {"type": "string"} |
meta.schema.json | name | a unique name for the schema that is both human-readable and consists of only characters from the NCName set | {"type": "string"} |
meta.schema.json | narrow_mappings | A list of terms from different schemas or terminology systems that have narrower meaning. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | notes | editorial notes about an element intended primarily for internal consumption | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | prefixes | A collection of prefix expansions that specify how CURIEs can be expanded to URIs | {"additionalProperties": {"anyOf": [{}, {"type": "string"}]}, "type": "object"} |
meta.schema.json | additionalProperties | The namespace to which a prefix expands to. | {"type": "string"} |
meta.schema.json | rank | the relative order in which the element occurs, lower values are given precedence | {"type": "integer"} |
meta.schema.json | related_mappings | A list of terms from different schemas or terminology systems that have related meaning. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | see_also | A list of related entities or URLs that may be of relevance | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | settings | A collection of global variable settings | {"additionalProperties": {"anyOf": [{}, {"type": "string"}]}, "type": "object"} |
meta.schema.json | additionalProperties | The value assigned for a setting | {"type": "string"} |
meta.schema.json | slot_names_unique | if true then induced/mangled slot names are not created for class_usage and attributes | {"type": "boolean"} |
meta.schema.json | slots | An index to the collection of all slot definitions in the schema | {"additionalProperties": {"anyOf": [{}, {"type": "null"}]}, "type": "object"} |
meta.schema.json | source | A related resource from which the element is derived. | {"type": "string"} |
meta.schema.json | source_file | name, uri or description of the source of the schema | {"type": "string"} |
meta.schema.json | source_file_date | modification date of the source of the schema | {"format": "date-time", "type": "string"} |
meta.schema.json | source_file_size | size in bytes of the source of the schema | {"type": "integer"} |
meta.schema.json | status | status of the element | {"type": "string"} |
meta.schema.json | structured_aliases | A list of structured_alias objects, used to provide aliases in conjunction with additional metadata. | {"items": {}, "type": "array"} |
meta.schema.json | subsets | An index to the collection of all subset definitions in the schema | {"additionalProperties": {"anyOf": [{}, {"type": "null"}]}, "type": "object"} |
meta.schema.json | title | A concise human-readable display label for the element. The title should mirror the name, and should use ordinary textual punctuation. | {"type": "string"} |
meta.schema.json | todos | Outstanding issues that needs resolution | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | types | An index to the collection of all type definitions in the schema | {"additionalProperties": {"anyOf": [{}, {"type": "null"}]}, "type": "object"} |
meta.schema.json | version | particular version of schema | {"type": "string"} |
meta.schema.json | Setting | assignment of a key to a value | {"additionalProperties": false, "properties": {"setting_key": {"type": "string"}, "setting_value": {"type": "string"}}, "required": ["setting_key", "setting_value"], "type": "object"} |
meta.schema.json | setting_key | the variable name for a setting | {"type": "string"} |
meta.schema.json | setting_value | The value assigned for a setting | {"type": "string"} |
meta.schema.json | Setting__identifier_optional | assignment of a key to a value | {"additionalProperties": false, "properties": {"setting_key": {"type": "string"}, "setting_value": {"type": "string"}}, "required": ["setting_value"], "type": "object"} |
meta.schema.json | setting_key | the variable name for a setting | {"type": "string"} |
meta.schema.json | setting_value | The value assigned for a setting | {"type": "string"} |
meta.schema.json | SlotDefinition | an element that describes how instances are related to other instances | {"additionalProperties": false, "properties": {"abstract": {"type": "boolean"}, "alias": {"type": "string"}, "aliases": {"items": {"type": "string"}, "type": "array"}, "all_members": {}, "all_of": {"items": {}, "type": "array"}, "alt_descriptions": {"additionalProperties": {"anyOf": [{}, {"type": "string"}]}, "type": "object"}, "annotations": {"additionalProperties": {}, "type": "object"}, "any_of": {"items": {}, "type": "array"}, "apply_to": {"items": {"type": "string"}, "type": "array"}, "asymmetric": {"type": "boolean"}, "broad_mappings": {"items": {"type": "string"}, "type": "array"}, "categories": {"items": {"type": "string"}, "type": "array"}, "children_are_mutually_disjoint": {"type": "boolean"}, "close_mappings": {"items": {"type": "string"}, "type": "array"}, "comments": {"items": {"type": "string"}, "type": "array"}, "conforms_to": {"type": "string"}, "contributors": {"items": {"type": "string"}, "type": "array"}, "created_by": {"type": "string"}, "created_on": {"format": "date-time", "type": "string"}, "definition_uri": {"type": "string"}, "deprecated": {"type": "string"}, "deprecated_element_has_exact_replacement": {"type": "string"}, "deprecated_element_has_possible_replacement": {"type": "string"}, "designates_type": {"type": "boolean"}, "disjoint_with": {"items": {"type": "string"}, "type": "array"}, "domain": {"type": "string"}, "domain_of": {"items": {"type": "string"}, "type": "array"}, "enum_range": {}, "equals_expression": {"type": "string"}, "equals_number": {"type": "integer"}, "equals_string": {"type": "string"}, "equals_string_in": {"items": {"type": "string"}, "type": "array"}, "exact_mappings": {"items": {"type": "string"}, "type": "array"}, "exactly_one_of": {"items": {}, "type": "array"}, "examples": {"items": {}, "type": "array"}, "extensions": {"additionalProperties": {}, "type": "object"}, "from_schema": {"type": "string"}, "has_member": {}, "id_prefixes": {"items": {"type": "string"}, "type": "array"}, "identifier": {"type": "boolean"}, "ifabsent": {"type": "string"}, "implements": {"items": {"type": "string"}, "type": "array"}, "implicit_prefix": {"type": "string"}, "imported_from": {"type": "string"}, "in_language": {"type": "string"}, "in_subset": {"items": {"type": "string"}, "type": "array"}, "inherited": {"type": "boolean"}, "inlined": {"type": "boolean"}, "inlined_as_list": {"type": "boolean"}, "instantiates": {"items": {"type": "string"}, "type": "array"}, "inverse": {"type": "string"}, "irreflexive": {"type": "boolean"}, "is_a": {"type": "string"}, "is_class_field": {"type": "boolean"}, "is_grouping_slot": {"type": "boolean"}, "is_usage_slot": {"type": "boolean"}, "key": {"type": "boolean"}, "keywords": {"items": {"type": "string"}, "type": "array"}, "last_updated_on": {"format": "date-time", "type": "string"}, "list_elements_ordered": {"type": "boolean"}, "list_elements_unique": {"type": "boolean"}, "local_names": {"additionalProperties": {"anyOf": [{}, {"type": "string"}]}, "type": "object"}, "locally_reflexive": {"type": "boolean"}, "mappings": {"items": {"type": "string"}, "type": "array"}, "maximum_cardinality": {"type": "integer"}, "maximum_value": {"type": "integer"}, "minimum_cardinality": {"type": "integer"}, "minimum_value": {"type": "integer"}, "mixin": {"type": "boolean"}, "mixins": {"items": {"type": "string"}, "type": "array"}, "modified_by": {"type": "string"}, "multivalued": {"type": "boolean"}, "name": {"type": "string"}, "narrow_mappings": {"items": {"type": "string"}, "type": "array"}, "none_of": {"items": {}, "type": "array"}, "notes": {"items": {"type": "string"}, "type": "array"}, "owner": {"type": "string"}, "path_rule": {}, "pattern": {"type": "string"}, "range": {"type": "string"}, "range_expression": {}, "rank": {"type": "integer"}, "readonly": {"type": "string"}, "recommended": {"type": "boolean"}, "reflexive": {"type": "boolean"}, "reflexive_transitive_form_of": {"type": "string"}, "related_mappings": {"items": {"type": "string"}, "type": "array"}, "relational_role": {}, "required": {"type": "boolean"}, "role": {"type": "string"}, "see_also": {"items": {"type": "string"}, "type": "array"}, "shared": {"type": "boolean"}, "singular_name": {"type": "string"}, "slot_group": {"type": "string"}, "slot_uri": {"type": "string"}, "source": {"type": "string"}, "status": {"type": "string"}, "string_serialization": {"type": "string"}, "structured_aliases": {"items": {}, "type": "array"}, "structured_pattern": {}, "subproperty_of": {"type": "string"}, "symmetric": {"type": "boolean"}, "todos": {"items": {"type": "string"}, "type": "array"}, "transitive": {"type": "boolean"}, "transitive_form_of": {"type": "string"}, "union_of": {"items": {"type": "string"}, "type": "array"}, "unit": {}, "usage_slot_name": {"type": "string"}, "value_presence": {}, "values_from": {"items": {"type": "string"}, "type": "array"}}, "required": ["name"], "type": "object"} |
meta.schema.json | abstract | Indicates the class or slot cannot be directly instantiated and is intended for grouping purposes. | {"type": "boolean"} |
meta.schema.json | alias | the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. | {"type": "string"} |
meta.schema.json | aliases | Alternate names/labels for the element. These do not alter the semantics of the schema, but may be useful to support search and alignment. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | all_members | the value of the slot is multivalued with all members satisfying the condition | {} |
meta.schema.json | all_of | holds if all of the expressions hold | {"items": {}, "type": "array"} |
meta.schema.json | alt_descriptions | A sourced alternative description for an element | {"additionalProperties": {"anyOf": [{}, {"type": "string"}]}, "type": "object"} |
meta.schema.json | additionalProperties | text of an attributed description | {"type": "string"} |
meta.schema.json | annotations | a collection of tag/text tuples with the semantics of OWL Annotation | {"additionalProperties": {}, "type": "object"} |
meta.schema.json | any_of | holds if at least one of the expressions hold | {"items": {}, "type": "array"} |
meta.schema.json | apply_to | Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | asymmetric | If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i | {"type": "boolean"} |
meta.schema.json | broad_mappings | A list of terms from different schemas or terminology systems that have broader meaning. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | categories | Controlled terms used to categorize an element. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | children_are_mutually_disjoint | If true then all direct is_a children are mutually disjoint and share no instances in common | {"type": "boolean"} |
meta.schema.json | close_mappings | A list of terms from different schemas or terminology systems that have close meaning. | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | comments | notes and comments about an element intended primarily for external consumption | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | conforms_to | An established standard to which the element conforms. | {"type": "string"} |
meta.schema.json | contributors | agent that contributed to the element | {"items": {"type": "string"}, "type": "array"} |
meta.schema.json | created_by | agent that created the element | {"type": "string"} |
meta.schema.json | created_on | time at which the element was created | {"format": "date-time", "type": "string"} |
meta.schema.json | definition_uri | The native URI of the element. This is always within the namespace of the containing schema. Contrast with the assigned URI, via class_uri or slot_uri | {"type": "string"} |
meta.schema.json | deprecated | Description of why and when this element will no longer be used | {"type": "string"} |
meta.schema.json | deprecated_element_has_exact_replacement | When an element is deprecated, it can be automatically replaced by this uri or curie | {"type": "string"} |
meta.schema.json | deprecated_element_has_possible_replacement | When an element is deprecated, it can be potentially replaced by this uri or curie | {"type": "string"} |
meta.schema.json | description | a textual description of the element's purpose and use | {"type": "string"} |
meta.schema.json | designates_type | True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition | {"type": "boolean"} |
meta.schema.json | disjoint_with | Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances | {"items": {"type": "string"}, "type": "array"} |
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