id stringlengths 40 40 | repo_name stringlengths 5 110 | path stringlengths 2 233 | content stringlengths 0 1.03M ⌀ | size int32 0 60M ⌀ | license stringclasses 15
values |
|---|---|---|---|---|---|
1d34b2fb6b5978320a1327544057faff64b25fc2 | jack6534/LIBRO | LIBROweight/LIBROweight.R | ### this is the code to plot the weight of portfolios formed by Markowitz method
### with or without crypto currencies.
# please change your working directory
# setwd('...')
rm(list = ls())
graphics.off()
libraries = c("xts")
lapply(libraries, function(x) if (!(x %in% installed.packages())) {
install.packages(x)... | 3,753 | gpl-3.0 |
aee9e5cef79043b0bcacd488fee9321abc27460f | hbwzhsh/RDMP | WebRoot/WEB-INF/classes/ustc/sse/r/test.R | #! /usr/bin/Rscript --vanilla
a<-1:10
print(a)
args <- commandArgs(TRUE)
# paste(c("I", "like", args[1], "and", args[2], "!"), collapse = " ")
print(args)
area<-function(r){pi*r^2} | 180 | gpl-2.0 |
aee9e5cef79043b0bcacd488fee9321abc27460f | starqiu/RDMP | src/ustc/sse/r/test.R | #! /usr/bin/Rscript --vanilla
a<-1:10
print(a)
args <- commandArgs(TRUE)
# paste(c("I", "like", args[1], "and", args[2], "!"), collapse = " ")
print(args)
area<-function(r){pi*r^2} | 180 | gpl-2.0 |
c5d0116f137a762a25160a24898be0ad71feb433 | kauralasoo/wiggleplotr | R/wiggleplotr.R | #' Quickly plot transcript structure without read coverage tracks
#'
#' @param exons list of GRanges objects, each object containing exons for one transcript.
#' The list must have names that correspond to transcript_id column in transript_annotations data.frame.
#' @param cdss list of GRanges objects, each object cont... | 23,240 | apache-2.0 |
aee9e5cef79043b0bcacd488fee9321abc27460f | starqiu/RDMP | WebRoot/WEB-INF/classes/ustc/sse/r/test.R | #! /usr/bin/Rscript --vanilla
a<-1:10
print(a)
args <- commandArgs(TRUE)
# paste(c("I", "like", args[1], "and", args[2], "!"), collapse = " ")
print(args)
area<-function(r){pi*r^2} | 180 | gpl-2.0 |
de836bbbbdf3b76c697fd620da2add6eec8184df | kthohr/kthohr.github.io | bmr/repl_files/dsge/LubikSchorfheide_gensys.R | #
# Lubik-Schorfheide (2007) Model
#
rm(list=ls())
library(BMR)
#
# Setting parameter values as per Lubik and Schorfheide (2007, Table 3, posterior means)
#
psi1 <- 1.30
psi2 <- 0.23
psi3 <- 0.14
#
rhoR <- 0.69
alpha <- 0.11
rSS <- 2.52
kappa <- 0.32
tau <- 0.31
#
rhoq <- 0.31
rhoz ... | 5,100 | apache-2.0 |
aee9e5cef79043b0bcacd488fee9321abc27460f | hbwzhsh/RDMP | src/ustc/sse/r/test.R | #! /usr/bin/Rscript --vanilla
a<-1:10
print(a)
args <- commandArgs(TRUE)
# paste(c("I", "like", args[1], "and", args[2], "!"), collapse = " ")
print(args)
area<-function(r){pi*r^2} | 180 | gpl-2.0 |
279f705a8ee418fec43ccb49853f8d9f4aaba957 | mitchest/optimus | tests/testthat.R | library(testthat)
library(optimus)
test_check("optimus")
| 58 | gpl-3.0 |
098a6d079fd3786e0bdb12cfabb241af7be03700 | fmakari/systemml | system-ml/src/test/scripts/functions/unary/scalar/DFTest_EXP_NOPARAMS.R | #-------------------------------------------------------------
#
# (C) Copyright IBM Corp. 2010, 2015
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LI... | 1,003 | apache-2.0 |
098a6d079fd3786e0bdb12cfabb241af7be03700 | ckadner/systemml | system-ml/src/test/scripts/functions/unary/scalar/DFTest_EXP_NOPARAMS.R | #-------------------------------------------------------------
#
# (C) Copyright IBM Corp. 2010, 2015
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LI... | 1,003 | apache-2.0 |
098a6d079fd3786e0bdb12cfabb241af7be03700 | wjuncdl/systemml | system-ml/src/test/scripts/functions/unary/scalar/DFTest_EXP_NOPARAMS.R | #-------------------------------------------------------------
#
# (C) Copyright IBM Corp. 2010, 2015
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LI... | 1,003 | apache-2.0 |
098a6d079fd3786e0bdb12cfabb241af7be03700 | Myasuka/systemml | system-ml/src/test/scripts/functions/unary/scalar/DFTest_EXP_NOPARAMS.R | #-------------------------------------------------------------
#
# (C) Copyright IBM Corp. 2010, 2015
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LI... | 1,003 | apache-2.0 |
098a6d079fd3786e0bdb12cfabb241af7be03700 | aloknsingh/systemml | system-ml/src/test/scripts/functions/unary/scalar/DFTest_EXP_NOPARAMS.R | #-------------------------------------------------------------
#
# (C) Copyright IBM Corp. 2010, 2015
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LI... | 1,003 | apache-2.0 |
098a6d079fd3786e0bdb12cfabb241af7be03700 | dusenberrymw/systemml_old | system-ml/src/test/scripts/functions/unary/scalar/DFTest_EXP_NOPARAMS.R | #-------------------------------------------------------------
#
# (C) Copyright IBM Corp. 2010, 2015
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LI... | 1,003 | apache-2.0 |
f1555fbe67abf3651f66d2da481a5d9da1052f21 | emmanuelparadis/coalescentMCMC | coalescentMCMC/R/dcoal.R | ## dcoal.R (2019-01-18)
## pdf of Various Time-Dependent Coalescent Models
## Copyright 2012-2019 Emmanuel Paradis
## This file is part of the R-package `coalescentMCMC'.
## See the file ../COPYING for licensing issues.
dcoal.step <- function(bt, theta0, theta1, tau, log = FALSE)
{
## if theta0 = theta1 use d... | 4,448 | gpl-2.0 |
789d144106513cf05bd67482be63140384460f3d | rho-devel/rho | src/extra/testr/filtered-test-suite/inherits/tc_inherits_3.R | expected <- eval(parse(text="FALSE"));
test(id=0, code={
argv <- eval(parse(text="list(structure(c(2, 3, 4, 5, 6, 7, 8, 9, 10, 11), .Tsp = c(2, 11, 1)), \"data.frame\", FALSE)"));
.Internal(`inherits`(argv[[1]], argv[[2]], argv[[3]]));
}, o=expected);
| 298 | gpl-2.0 |
789d144106513cf05bd67482be63140384460f3d | kmillar/cxxr | src/extra/testr/filtered-test-suite/inherits/tc_inherits_3.R | expected <- eval(parse(text="FALSE"));
test(id=0, code={
argv <- eval(parse(text="list(structure(c(2, 3, 4, 5, 6, 7, 8, 9, 10, 11), .Tsp = c(2, 11, 1)), \"data.frame\", FALSE)"));
.Internal(`inherits`(argv[[1]], argv[[2]], argv[[3]]));
}, o=expected);
| 298 | gpl-2.0 |
789d144106513cf05bd67482be63140384460f3d | kmillar/rho | src/extra/testr/filtered-test-suite/inherits/tc_inherits_3.R | expected <- eval(parse(text="FALSE"));
test(id=0, code={
argv <- eval(parse(text="list(structure(c(2, 3, 4, 5, 6, 7, 8, 9, 10, 11), .Tsp = c(2, 11, 1)), \"data.frame\", FALSE)"));
.Internal(`inherits`(argv[[1]], argv[[2]], argv[[3]]));
}, o=expected);
| 298 | gpl-2.0 |
789d144106513cf05bd67482be63140384460f3d | ArunChauhan/cxxr | src/extra/testr/filtered-test-suite/inherits/tc_inherits_3.R | expected <- eval(parse(text="FALSE"));
test(id=0, code={
argv <- eval(parse(text="list(structure(c(2, 3, 4, 5, 6, 7, 8, 9, 10, 11), .Tsp = c(2, 11, 1)), \"data.frame\", FALSE)"));
.Internal(`inherits`(argv[[1]], argv[[2]], argv[[3]]));
}, o=expected);
| 298 | gpl-2.0 |
789d144106513cf05bd67482be63140384460f3d | krlmlr/cxxr | src/extra/testr/filtered-test-suite/inherits/tc_inherits_3.R | expected <- eval(parse(text="FALSE"));
test(id=0, code={
argv <- eval(parse(text="list(structure(c(2, 3, 4, 5, 6, 7, 8, 9, 10, 11), .Tsp = c(2, 11, 1)), \"data.frame\", FALSE)"));
.Internal(`inherits`(argv[[1]], argv[[2]], argv[[3]]));
}, o=expected);
| 298 | gpl-2.0 |
41eb18092fa7cd9b0ad2e7ed425629f774d55473 | e3bo/pomp | tests/link.R | library(pomp)
options(verbose=FALSE)
cat("double simplefun (double x) { return(x+3); }",file="simplefun.c")
system2(R.home("bin/R"),args=c("CMD","COMPILE","simplefun.c"))
pompExample(ricker)
pomp(ricker,rmeasure=Csnippet("
double simplefun (double);
double m = simplefun(N);
y = rpois(phi*m);"),
statenames="... | 608 | gpl-3.0 |
67244230fa05b715a5a1742ea0dd20ec6aac247b | klmr/trna | chip/scripts/meme-analysis.R | source('scripts/de.R')
source('scripts/expressed-per-stage.R')
memeBin <- 'meme'
dustBin <- 'dust'
tomtomBin <- 'tomtom'
filterFastaBin <- '../common/scripts/filter-fasta'
markovModelBin <- '../common/scripts/markov-model-from-fasta'
trnaUpstreamFastaFile <- '../common/data/trna-upstream-with-ids.fasta'
memeDatabasePa... | 9,021 | apache-2.0 |
789d144106513cf05bd67482be63140384460f3d | cxxr-devel/cxxr | src/extra/testr/filtered-test-suite/inherits/tc_inherits_3.R | expected <- eval(parse(text="FALSE"));
test(id=0, code={
argv <- eval(parse(text="list(structure(c(2, 3, 4, 5, 6, 7, 8, 9, 10, 11), .Tsp = c(2, 11, 1)), \"data.frame\", FALSE)"));
.Internal(`inherits`(argv[[1]], argv[[2]], argv[[3]]));
}, o=expected);
| 298 | gpl-2.0 |
29207dd62e72af6d0ef7e804e025f986c1bf882b | LucFrachon/CourseraDataProducts | rawCode/rawCode.R | # Prep stage
library(caret); library(rpart); library(rattle); library(rpart.plot)
library(randomForest); library(dplyr); library(parallel); library(doParallel)
library(ipred); library(RANN)
set.seed(2077)
cluster <- makeCluster(detectCores())
registerDoParallel(cluster)
fitControl <- trainControl(allowParallel = TRU... | 8,904 | gpl-3.0 |
321fbcdc45f9e23a57fe6509d8386cbe6763c871 | LennonLab/flow-cytometry | bin/qaProcess.GenericImages.R | qaProcess.GenericImages <- function(
filenames,
frameIDs,
outdir="QAReport",
name="Gating Images",
flags = NULL,
width=200,
pdf = FALSE,
summary.graph = NULL,
...)
{
# This function generates a qaProcess object using images, which can be used to generate an HTML report about a flowset
# Args:
# file... | 4,276 | gpl-3.0 |
321fbcdc45f9e23a57fe6509d8386cbe6763c871 | meganllarsen/flow-cytometry | bin/qaProcess.GenericImages.R | qaProcess.GenericImages <- function(
filenames,
frameIDs,
outdir="QAReport",
name="Gating Images",
flags = NULL,
width=200,
pdf = FALSE,
summary.graph = NULL,
...)
{
# This function generates a qaProcess object using images, which can be used to generate an HTML report about a flowset
# Args:
# file... | 4,276 | gpl-3.0 |
321fbcdc45f9e23a57fe6509d8386cbe6763c871 | wrshoemaker/flow-cytometry | bin/qaProcess.GenericImages.R | qaProcess.GenericImages <- function(
filenames,
frameIDs,
outdir="QAReport",
name="Gating Images",
flags = NULL,
width=200,
pdf = FALSE,
summary.graph = NULL,
...)
{
# This function generates a qaProcess object using images, which can be used to generate an HTML report about a flowset
# Args:
# file... | 4,276 | gpl-3.0 |
6d91326c7c96da955faf6ef57774fc53732262e8 | latreach/HoraPosteoFinanciera | posteosFinancieras.R | # Librerías ---------------------------------------------------------------
library(magrittr)
c("data.table", "dplyr","tidyr","lubridate","vegetarian","vegan",
"lattice","ggplot2", "purrr","lme4", "xts","reshape2","Rfacebook",
"dygraphs") %>%
sapply(require, character.only=T)
# Conexión a Facebook -------------... | 3,032 | gpl-3.0 |
5733f335edb4833605803d9ab597c1979c1cb5fa | iainmstott/popdemo | 1.2-0/popdemo/demo/transfer.R | #=================================================
#Transfer function analyses
#Transfer function analysis is a means of exact
#perturbation analysis. It looks at how a change
#in the vital rates of the population (the matrix
#elements or their underlying parameters)
#translates to a change in population dynamics.
#po... | 4,822 | gpl-3.0 |
7d162bc3b26ba07e61aa6e3b667243c2ae2caa18 | anasrana/spector | R/aux-functions.R | #' @importFrom stringr str_detect
#'
checkGenome <- function(genome) {
#ToDo check for implementation to allow for different case and mixed case
if (str_detect(genome, "38|19|37")) {
if (str_detect(genome, "38")) {
genome <- "hg38"
} else if (str_detect(genome, "37|19")) {
genome <- "hg19"
}
... | 1,385 | gpl-3.0 |
5733f335edb4833605803d9ab597c1979c1cb5fa | iainmstott/popdemo | 1.2-1/popdemo/demo/transfer.R | #=================================================
#Transfer function analyses
#Transfer function analysis is a means of exact
#perturbation analysis. It looks at how a change
#in the vital rates of the population (the matrix
#elements or their underlying parameters)
#translates to a change in population dynamics.
#po... | 4,822 | gpl-3.0 |
5733f335edb4833605803d9ab597c1979c1cb5fa | iainmstott/popdemo | 1.1-1/popdemo/demo/transfer.R | #=================================================
#Transfer function analyses
#Transfer function analysis is a means of exact
#perturbation analysis. It looks at how a change
#in the vital rates of the population (the matrix
#elements or their underlying parameters)
#translates to a change in population dynamics.
#po... | 4,822 | gpl-3.0 |
a47ab25f607a91f6441a64df7829d6a11756169c | juancholkovich/coexnet | R/ppiNet.R | # Bioinformatics and Systems Biology | Universidad Nacional de Colombia
#' @export ppiNet
#' @author Juan David Henao <judhenaosa@unal.edu.co>
#' @title Create a protein-protein interaction network
#' @description Creates a protein-protein interaction network using an edge list with the relations between proteins or a... | 4,974 | gpl-3.0 |
a43f1c8868cfd6781317951cb2b36d273ecf96b6 | nlmixrdevelopment/nlmixr | build/test_install.R | # Installation test function
test_install <- function(){
# Test 1: Correct R version
if(sessionInfo()$R.version$major=="3" & as.numeric(sessionInfo()$R.version$minor)>=4.1){
cat(paste0("Correct R version: Yes, ",sessionInfo()$R.... | 7,624 | gpl-2.0 |
5d5ada5859c8658df142f23050c5c42c178c7eff | mwouts/jupytext | tests/notebooks/mirror/ipynb_to_percent/R notebook with invalid cell keys.R | # ---
# jupyter:
# kernelspec:
# display_name: R
# language: R
# name: ir
# ---
# %% [markdown]
# This notebook was created with IRKernel 0.8.12, and is not completely valid, as the code cell below contains an unexpected 'source' entry. This did cause https://github.com/mwouts/jupytext/issues/234. Note t... | 447 | mit |
050808a161860a8ca273f41dd03dd52347c62ced | vivekbhr/vivlib | R/DiffExp_wrapper.R |
#' A Wrapper for DESeq2 over featurecounts output
#'
#' @param fcountOutput featurecounts output (with control and test columns)
#' @param numReplicates Number of replicates (could be an integer if the number is same for control and test,
#' or a vector with number of replicates for control and fo... | 10,476 | gpl-3.0 |
5d5ada5859c8658df142f23050c5c42c178c7eff | mwouts/jupytext | tests/notebooks/mirror/ipynb_to_hydrogen/R notebook with invalid cell keys.R | # ---
# jupyter:
# kernelspec:
# display_name: R
# language: R
# name: ir
# ---
# %% [markdown]
# This notebook was created with IRKernel 0.8.12, and is not completely valid, as the code cell below contains an unexpected 'source' entry. This did cause https://github.com/mwouts/jupytext/issues/234. Note t... | 447 | mit |
27a362d35e554cfeb146b872a6daa081e50a363e | zwdzwd/wheatmap | R/gg.R | #' WGG object
#' form ggplot with coordinates
#'
#' @param ggobj ggplot plotting object
#' @param dm dimension
#' @param name name
#' @return WGG object
#' @export
WGG <- function(ggobj, dm=NULL, name='') {
if (is.null(dm)) {
dm <- WDim(0,0,1,1,nr=1, nc=1)
}
ggp <- list(ggobj=ggobj, dm=dm, name=nam... | 1,151 | mit |
5bd5758ec9810733464e2abe81168b490f7d1200 | ryan-ucd/gosner_boylii | ui.R | ## TO DO:
## Add a png of the GOSNER paper
## Add the specific stage next to each photo?
library(shiny)
headerPanel_2 <- function(title, h, windowTitle=title) {
tagList(
tags$head(tags$title(windowTitle)),
h(title)
)
}
shinyUI(fluidPage(
headerPanel_2(
HTML(
'<div ... | 1,495 | gpl-2.0 |
c4a34a8c4dc6ae5806336076154032bb2be948d1 | hanhanwu/Hanhan_Data_Science_Practice | insurance_spark_data.R | # Generate training, testing for Spark
#set working directory
path<- "[your root for training and testing data]"
setwd(path)
# load data, 298 features + 1 column of label
train <- read.csv("insurance_train.csv")
test <- read.csv("insurance_test.csv")
# quick explore data
dim(train)
dim(test)
str(train)
str(test)
sum... | 8,221 | mit |
033146695e43ec22f2d677ff1dd50a90cc4063ba | BigelowLab/nam218 | R/misc.R | #' Perform grepl on multiple patterns; it's like AND-ing or OR-ing successive grepl statements.
#'
#' @export
#' @param pattern character vector of patterns
#' @param x the character vector to search
#' @param op logical vector operator back quoted, defaults to `|`
#' @param ... further arguments for \code{grepl} like... | 4,913 | mit |
9fc46bc4b424457d547b6ce1919719dab5452a97 | fschueler/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | gweidner/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
dc3b8e87ece70755c40db131e5fb1c9636675e3e | bospetersen/h2o-3 | h2o-r/H2O_Load.R | # Change this global variable to match your own system's path
ANQIS.ROOT.PATH <- "/Users/anqi_fu/Documents/workspace/"
ANQIS.WIN.PATH <- "C:/Users/Anqi/Documents/Work/"
SPENCERS.ROOT.PATH <- "/Users/spencer/0xdata/"
ROOT.PATH <- SPENCERS.ROOT.PATH
DEV.PATH <- "h2o-3/h2o-r/h2o-package/R/"
FULL.PATH <- paste(ROOT.PATH, ... | 1,120 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | akchinSTC/systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | deroneriksson/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | iyounus/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | gweidner/systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | asurve/systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | nakul02/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | apache/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | niketanpansare/systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | asurve/arvind-sysml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | asurve/arvind-sysml2 | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | dusenberrymw/systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
dc3b8e87ece70755c40db131e5fb1c9636675e3e | tarasane/h2o-3 | h2o-r/H2O_Load.R | # Change this global variable to match your own system's path
ANQIS.ROOT.PATH <- "/Users/anqi_fu/Documents/workspace/"
ANQIS.WIN.PATH <- "C:/Users/Anqi/Documents/Work/"
SPENCERS.ROOT.PATH <- "/Users/spencer/0xdata/"
ROOT.PATH <- SPENCERS.ROOT.PATH
DEV.PATH <- "h2o-3/h2o-r/h2o-package/R/"
FULL.PATH <- paste(ROOT.PATH, ... | 1,120 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | dhutchis/systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | deroneriksson/systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | niketanpansare/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | nakul02/systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | dusenberrymw/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | Wenpei/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | asurve/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
9fc46bc4b424457d547b6ce1919719dab5452a97 | sandeep-n/incubator-systemml | src/test/scripts/functions/unary/scalar/DFTest_NORMAL.R | #-------------------------------------------------------------
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under... | 1,323 | apache-2.0 |
e142651b9b278e1fc0bb97ff9340ed9a8b77dc75 | bdetweiler/stat-8426-poster | DBDA2Eprograms/Jags-Ymet-XmetMulti-MrobustVarSelect-Example.R | # Example for Jags-Ymet-XmetMulti-MrobustVarSelect.R
#-------------------------------------------------------------------------------
# Optional generic preliminaries:
graphics.off() # This closes all of R's graphics windows.
rm(list=ls()) # Careful! This clears all of R's memory!
#----------------------------------... | 4,898 | mit |
e23a997335b74962eb42a96e113776ab4807fa03 | pwkraft/pmisc | R/arimax2.R | #' This is a quick fix of the original arimax function which works for the
#' following cases: (0,0,0) model with transfer! with this function, no fixed
#' parameters are possible! last change: 2013-10-01 by Patrick Original author of
#' the arima function in R stats: Brian Ripley. The arimax function is based on
#'... | 21,716 | gpl-2.0 |
308c90ff178936561235247a81a83968a21b53a7 | e-sensing/sits | tests/testthat/test-tibble.R | test_that("Align dates", {
timeline <- sits_timeline(point_mt_6bands)
start_date <- lubridate::as_date("2001-08-01")
end_date <- lubridate::as_date("2002-07-31")
ref_dates <- timeline[timeline > start_date]
ref_dates <- ref_dates[ref_dates < end_date]
new_data <- .tibble_align_dates(samples_m... | 3,492 | gpl-2.0 |
ccb57b5cf47deee9776e1cb773571908ff312fe6 | jcarlosmayo/helsinki_housing | shiny/server.R | shinyServer(function(input, output, session) {
# Subset the data according to user input
react_housing_data <- reactive({
data <- subset(housing, price >= input$price_slider[1] & price <= input$price_slider[2] &
size >= input$size_slider[1] & size <= input$size_slider[2] &
... | 3,493 | mit |
19aeb6425466b622e375299c22e1c9703bc15cb8 | leo42k/CourseRecommenderApp | rsconnect.R | # install.packages("rsconnect")
library(rsconnect)
rsconnect::setAccountInfo(name='jhubiostatistics', token='A12E679D3BDB7BD8EBDBB070ECB1A2DC', secret='cxQUJL4Nf+I56VBOIHa3Nq5DE0zQwCqOL2ueBune')
deployApp()
| 208 | mit |
9336d4ca3f24cd1e812fc362bcdb8db3615d0827 | ayacha/food-inspections-evaluation | CODE/23_generate_model_dat.R |
##==============================================================================
## INITIALIZE
##==============================================================================
## Remove all objects; perform garbage collection
rm(list=ls())
gc(reset=TRUE)
## Detach libraries that are not used
geneorama::detach_nonstand... | 9,573 | mit |
8e32684075f66585deb1a44578850590a832277f | AmeliaMN/MapExplorations | R/mapexplo/ui.R | shinyUI(fluidPage(
titlePanel("Playing with aggregation"),
sidebarLayout(
sidebarPanel(
sliderInput("lon", label="x-value", min=-120, max=-116, step=0.01, value=-119),
sliderInput("lat", label="y-value", min=32, max=35, step=0.01, value=32),
sliderInput("howmany", label="boxes", min=1, max=... | 387 | gpl-2.0 |
6b06dafc9f373f6ea494f946d90eac9cf91d2e47 | peterdesmet/favourite-fruit-color | src/analysis.R |
# Example script for github tutorial
| 38 | mit |
58d4ded7879bea663d49261b0404d9fb16b0956e | NGSchool2016/ngschool2016-materials | chip_seq/.R_library/3.3/Rsamtools/scripts/remote_test.R | suppressMessages(library(Rsamtools))
fl = "ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/data/NA19240/alignment/NA19240.chrom6.SLX.maq.SRP000032.2009_07.bam"
p1 <- ScanBamParam(which=RangesList("6"=IRanges(10000, 11000)))
res <- scanBam(fl, param=p1)[[1]]
res[["seq"]]
fl = "ftp://ftp-trace.ncbi.nih.gov/1000g... | 763 | gpl-3.0 |
58d4ded7879bea663d49261b0404d9fb16b0956e | nhayden/Rsamtools | inst/scripts/remote_test.R | suppressMessages(library(Rsamtools))
fl = "ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/data/NA19240/alignment/NA19240.chrom6.SLX.maq.SRP000032.2009_07.bam"
p1 <- ScanBamParam(which=RangesList("6"=IRanges(10000, 11000)))
res <- scanBam(fl, param=p1)[[1]]
res[["seq"]]
fl = "ftp://ftp-trace.ncbi.nih.gov/1000g... | 763 | mit |
5e0d4b2f1e46457e5709c805d11fa72f5e7fcdc4 | kauralasoo/Blood_ATAC | scripts/merge_QTLtools_PCAs.R | #Run QTLtools PCA
# QTLtools pca --bed CTCF.norm_prop.txt.gz --center --scale --out CTCF.pheno_pca
# QTLtools pca --vcf /gpfs/hpchome/a72094/rocket/datasets/CTCF/genotypes/vcf/GRCh38/CTCF_51_samples.GRCh38.final.vcf.gz --center --scale --out CTCF.geno_pca
#Import PCA results
phenotype_pca = readr::read_delim("processe... | 832 | apache-2.0 |
608614b53b54f289be11560370705a4f038eae55 | schifferl/LagSelectionBias | R/mortify_cohort.R | mortify_cohort <- function(filtered_data, current_year) {
for (x in unique(filtered_data$age_group)) {
for (y in unique(filtered_data$race)) {
for (z in unique(filtered_data$sex)) {
mortality_cohort <-
filtered_data %>%
filter(age_group == x) %>%
filter(race == y) %>%
... | 1,299 | mit |
58d4ded7879bea663d49261b0404d9fb16b0956e | CodeGit/SequenceImp | dependencies-bin/macosx/bin/R/lib/R/library/Rsamtools/scripts/remote_test.R | suppressMessages(library(Rsamtools))
fl = "ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/data/NA19240/alignment/NA19240.chrom6.SLX.maq.SRP000032.2009_07.bam"
p1 <- ScanBamParam(which=RangesList("6"=IRanges(10000, 11000)))
res <- scanBam(fl, param=p1)[[1]]
res[["seq"]]
fl = "ftp://ftp-trace.ncbi.nih.gov/1000g... | 763 | gpl-3.0 |
58d4ded7879bea663d49261b0404d9fb16b0956e | mtmorgan/Rsamtools | inst/scripts/remote_test.R | suppressMessages(library(Rsamtools))
fl = "ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/data/NA19240/alignment/NA19240.chrom6.SLX.maq.SRP000032.2009_07.bam"
p1 <- ScanBamParam(which=RangesList("6"=IRanges(10000, 11000)))
res <- scanBam(fl, param=p1)[[1]]
res[["seq"]]
fl = "ftp://ftp-trace.ncbi.nih.gov/1000g... | 763 | mit |
58d4ded7879bea663d49261b0404d9fb16b0956e | CodeGit/SequenceImp | dependencies-bin/linux/bin/R/lib64/R/library/Rsamtools/scripts/remote_test.R | suppressMessages(library(Rsamtools))
fl = "ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/data/NA19240/alignment/NA19240.chrom6.SLX.maq.SRP000032.2009_07.bam"
p1 <- ScanBamParam(which=RangesList("6"=IRanges(10000, 11000)))
res <- scanBam(fl, param=p1)[[1]]
res[["seq"]]
fl = "ftp://ftp-trace.ncbi.nih.gov/1000g... | 763 | gpl-3.0 |
58d4ded7879bea663d49261b0404d9fb16b0956e | jimhester/Rsamtools | inst/scripts/remote_test.R | suppressMessages(library(Rsamtools))
fl = "ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/data/NA19240/alignment/NA19240.chrom6.SLX.maq.SRP000032.2009_07.bam"
p1 <- ScanBamParam(which=RangesList("6"=IRanges(10000, 11000)))
res <- scanBam(fl, param=p1)[[1]]
res[["seq"]]
fl = "ftp://ftp-trace.ncbi.nih.gov/1000g... | 763 | mit |
58d4ded7879bea663d49261b0404d9fb16b0956e | CodeGit/SequenceImp | dependencies-bin/windows/bin/R/library/Rsamtools/scripts/remote_test.R | suppressMessages(library(Rsamtools))
fl = "ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/data/NA19240/alignment/NA19240.chrom6.SLX.maq.SRP000032.2009_07.bam"
p1 <- ScanBamParam(which=RangesList("6"=IRanges(10000, 11000)))
res <- scanBam(fl, param=p1)[[1]]
res[["seq"]]
fl = "ftp://ftp-trace.ncbi.nih.gov/1000g... | 763 | gpl-3.0 |
a531cb0af76484ed5516575de69f14a48e315b2e | variani/matlm | tests/testthat/test-orth.R | context("orth")
test_that("matlm_orth", {
N <- 50
# simulate data
set.seed(1)
y <- rnorm(N)
c1 <- rep(1, N)
c2 <- rbinom(N, 1, 0.5)
C <- cbind(c1, c2)
# orth. on c1
y_orth1 <- matlm_orth(c1, y)
# orth. on C = [c1, c2]
y_orth2 <- matlm_orth(C, y)
# expect
expect_true(abs(crosspr... | 800 | gpl-3.0 |
58d4ded7879bea663d49261b0404d9fb16b0956e | NGSchool2016/ngschool2016-materials | chip_seq/.R_library/3.2/Rsamtools/scripts/remote_test.R | suppressMessages(library(Rsamtools))
fl = "ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/data/NA19240/alignment/NA19240.chrom6.SLX.maq.SRP000032.2009_07.bam"
p1 <- ScanBamParam(which=RangesList("6"=IRanges(10000, 11000)))
res <- scanBam(fl, param=p1)[[1]]
res[["seq"]]
fl = "ftp://ftp-trace.ncbi.nih.gov/1000g... | 763 | gpl-3.0 |
58d4ded7879bea663d49261b0404d9fb16b0956e | genome-vendor/r-bioc-rsamtools | inst/scripts/remote_test.R | suppressMessages(library(Rsamtools))
fl = "ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/pilot_data/data/NA19240/alignment/NA19240.chrom6.SLX.maq.SRP000032.2009_07.bam"
p1 <- ScanBamParam(which=RangesList("6"=IRanges(10000, 11000)))
res <- scanBam(fl, param=p1)[[1]]
res[["seq"]]
fl = "ftp://ftp-trace.ncbi.nih.gov/1000g... | 763 | mit |
01770706aaeed2a99e06e1d5f6181af185e199af | cran/TIMP | R/skew.R | "skew" <-
function(numax, deltanu, b, nu, nupower=1)
{
arg <- 1 + (2 * b * (nu - numax))/deltanu
res <- arg
res[which(arg>0)] <- exp( - log(2) * (log(arg[which(arg>0)])/b)^2)
res[which(arg<=0)] <- 0
if(nupower!=1)
res <- res * nu^nupower
res
}
| 277 | gpl-2.0 |
184142efe0da321e5cee77a7bfdfce3b0b99c3ce | bospetersen/h2o-3 | h2o-r/demos/large/citibike_nyc.R | ## Set your working directory
setwd(normalizePath(dirname(R.utils::commandArgs(asValues=TRUE)$"f")))
# Explore a typical Data Science workflow with H2O and R
#
# Goal: assist the manager of data of NYC to load-balance the bicycles
# across the data network of stations, by predicting the number of bike
# trips taken fr... | 7,099 | apache-2.0 |
188761d64e2757045d705514946583e209557b1e | whitneyburrow/HighDim2Means | R/skTest.R | #' Srivastava-Kubokawa Test
#'
#' @param x Data set 1.
#' @param y Data set 2.
#'
#' @importFrom highD2pop SK.test
#'
#' @return
#' @export
skTest <- function(x, y) {
highD2pop::SK.test(x, y)[[1]]
}
| 204 | mit |
184142efe0da321e5cee77a7bfdfce3b0b99c3ce | tarasane/h2o-3 | h2o-r/demos/large/citibike_nyc.R | ## Set your working directory
setwd(normalizePath(dirname(R.utils::commandArgs(asValues=TRUE)$"f")))
# Explore a typical Data Science workflow with H2O and R
#
# Goal: assist the manager of data of NYC to load-balance the bicycles
# across the data network of stations, by predicting the number of bike
# trips taken fr... | 7,099 | apache-2.0 |
a315271a029faa4fa6b6413d295799f41170a26e | barakbri/AutoNeta | AutoTransMan/Function Project.R | ###########################
# Libraries Load ----------------------------------------------------------
library('ggplot2')
###########################
###########################
# Index Functions --------------------------------------------------------
## Creating index, currently only supports YULE
## Should alwa... | 16,806 | gpl-3.0 |
9faed8dbe2eabc97c28aaebd8b591fe44a7bde3c | edzer/gstat | R/krigeTg.R | # $Id: krigeTg.q,v 1.4 2009-07-07 15:42:39 edzer Exp $
phiInv <- function (x, lambda)
if (lambda==0) log(x) else (x^lambda-1)/lambda
phi <- function(x, lambda)
if (lambda==0) exp(x) else (x*lambda+1)^(1/lambda)
phiPrime <- function (x, lambda)
if (lambda==0) exp(x) else (x*lambda+1)^(1/lambda-1)
... | 2,299 | gpl-2.0 |
ec56c032a872149030977fc8c659b047f185e3a2 | hojsgaard/doBy | R/doby-utilities.R | #' @title Extract components from a formula with "conditioning bar"
#'
#' @description Extract components from a formula with the form
#' \code{y ~ x1 + ... + xn | g1 + ... + gm}
#'
#' @param form A formula of the form \code{y ~ x1 + ... + xn | g1 + ... + gm}
#' @return If the formula is \code{y ~ x1 + x2 | g1 + ... | 1,734 | gpl-2.0 |
0929ac6421df774d963961ea0c30191ffb2914c0 | PFgimenez/thesis | R-files/data_alarm.R | library(ggplot2)
#--------------------------------------------------------------------------------------------
#Parametres globaux
dataset_name = "alarm"
taille_img_x = 1024/2
taille_img_y = 720/2
#fin parametres globaux
#--------------------------------------------------------------------------------------------
#--... | 15,902 | gpl-3.0 |
0929ac6421df774d963961ea0c30191ffb2914c0 | PFgimenez/PhD | R-files/data_alarm.R | library(ggplot2)
#--------------------------------------------------------------------------------------------
#Parametres globaux
dataset_name = "alarm"
taille_img_x = 1024/2
taille_img_y = 720/2
#fin parametres globaux
#--------------------------------------------------------------------------------------------
#--... | 15,902 | gpl-3.0 |
6a9edefc38fc39d0e93b85fe3db1da9bc0fe151b | famuvie/breedR | tests/testthat/test-modelmatrix.R | ### Test the computation of model matrices ###
context("Model Matrix")
fullcoord <- expand.grid(list(x = seq(1, 100, length = 51),
y = seq(1001, 1100, length = 35)),
KEEP.OUT.ATTRS = FALSE)
fullN <- nrow(fullcoord)
rm.idx <- sample(fullN, fullN/10)
coord <- fullcoord... | 1,953 | gpl-3.0 |
a773ac03c9ec2df026b96019f94fe6354b2c582d | guzmanlopez/PAS-DINARA | shiny/loadSSS/global.R | # Source files
# Global data frame of extracted GPS positions
df_gps = data.frame()
# function sssExtractGPS (extract GPS positions from raw CSV Tritech StarFish SideScanSonar)
source("source/sssExtractGPS.R")
# function sssGPS2SHP (export positions from Tritech StarFish SideScanSonar to line shapefile)
source("sourc... | 336 | gpl-3.0 |
c893c7ccbb53a7317632cefd581d2a58223ef7b6 | kpurcell/EcosysMetricsGOM | Analysis/matrix_plot_data_prep_2013-7-15.R | # Matrix plot of species abundance
# 2013-5-21
# Script objective: To import SEAMAP data, calculate cpue (biomass)
# plot a color matrix of abundance and species(in trophic order)
#Clear the junk
graphics.off()
rm(list=ls(all=TRUE))
#Change working directory to the project folder
setwd("C:/Users/kevin.purcell/Docume... | 4,396 | mit |
952a1aa12d4d7897efdb50530e5c7e56a13c129a | Uni-Marburg-IGS-Statistik/Statistik-f-r-Sprachwissenschaftler | Loesungen/hausaufgabe03b.R | # Hausaufgabe 03
# Phillip Alday <phillip.alday@staff.uni-marburg.de>
# 2014-06-22
# Dieses Werk ist lizenziert unter einer CC-BY-NC-SA Lizenz.
# Sie sollten die Datei auch in Ihren Ordner kopieren und einen Commit machen,
# bevor Sie die Kopie weiter anpassen! Vergessen Sie dabei nicht, Namen, Datum
# und ggf. Lizen... | 4,647 | gpl-2.0 |
4872a6099dd561065536ea45e722398d293c129e | hughjonesd/lifeworld | server.R |
library(shiny)
library(leaflet)
library(refset)
minDist <- 100
mapTimeout <- 1000 * 10; # in millisecs
vars <- reactiveValues()
vars$dfr <- data.frame(id=character(0), lat=numeric(0), long=numeric(0),
alive=logical(0), time=numeric(0))
# for testing
testing <- TRUE
if (testing) {
nfake <- 250
vars$dfr <- ... | 3,665 | gpl-2.0 |
bf62f8b0bbe9b379d5aedebfb6d59b2b9112270d | njfreesurfer/statistical-learning | ch05/applied.R | #++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
#
# An Introduction to Statistical Learning
# with Applications in R
#
# Gareth James, Daniela Witten, Trevor Hastie, and Robert Tibshirani
#
# To get a free PDF of the book: http://www-bcf.usc.edu/~gareth/ISL/
#
#++++++++++++++++++++++++++++++++++... | 7,034 | gpl-2.0 |
38f8acde45c240df8e7a1e3e60ed2adee5266e66 | mclapham/guadalupian-abundance-paper | occurrence_acq.R | #SCRIPT TO ACQUIRE AND FILTER BRACHIOPOD OCCURRENCE DATA
#GENERATES MATRIX OF OCCURRENCE FREQUENCY (COLUMNS=TIME INTERVALS, ROWS=GENERA)
#ORDERED BY TIME INTERVAL FOR TETHYS AND EACH REGION (IRAN, S CHINA, PAKISTAN)
#Specifies input parameters
include_taxon<-"Brachiopoda"
maxinterval<-"Roadian"
mininterval<-"Changhsin... | 4,049 | cc0-1.0 |
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