dermalens-datasets / README.md
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---
license: cc-by-nc-sa-4.0
task_categories:
- image-classification
tags:
- dermatology
- skin-cancer
- medical-imaging
- HAM10000
pretty_name: DermaLens Skin Cancer Dataset
size_categories:
- 10K<n<100K
configs:
- config_name: default
data_files:
- split: train
path: data/train-*
- split: validation
path: data/validation-*
- split: test
path: data/test-*
dataset_info:
features:
- name: image
dtype: image
- name: image_id
dtype: string
- name: lesion_id
dtype: string
- name: dx
dtype: string
- name: dx_type
dtype: string
- name: age
dtype: float64
- name: sex
dtype: string
- name: localization
dtype: string
splits:
- name: train
num_bytes: 2650122851
num_examples: 9577
- name: validation
num_bytes: 689647139
num_examples: 2492
- name: test
num_bytes: 354617559
num_examples: 1285
download_size: 3693404553
dataset_size: 3694387549
---
# DermaLens Skin Cancer Dataset
This dataset repo documents the data pipeline used to train the **DermaLens V3** skin cancer classification model.
## Source Dataset
**HAM10000** (Human Against Machine with 10000 training images) — accessed via [`marmal88/skin_cancer`](https://huggingface.co/datasets/marmal88/skin_cancer) on HuggingFace.
```python
from datasets import load_dataset
ds = load_dataset("marmal88/skin_cancer")
```
## Dataset Statistics
| Split | Images | Malignant | Benign | Positive Rate |
|-------|--------|-----------|--------|---------------|
| Train | 10,683 | ~2,093 | ~8,590 | 19.6% |
| Validation | 1,335 | ~263 | ~1,072 | 19.7% |
| Test | 1,336 | ~253 | ~1,083 | 18.9% |
| **Total** | **13,354** | **~2,609** | **~10,745** | **19.5%** |
## Label Mapping (Binary)
| Original Class (`dx`) | Binary Label | Category |
|------------------------|-------------|----------|
| `melanoma` | 1 (Malignant) | Malignant melanocytic |
| `basal_cell_carcinoma` | 1 (Malignant) | Non-melanocytic malignant |
| `actinic_keratoses` | 1 (Malignant) | Pre-cancerous |
| `melanocytic_Nevi` | 0 (Benign) | Common moles |
| `benign_keratosis-like_lesions` | 0 (Benign) | Seborrheic keratoses etc. |
| `dermatofibroma` | 0 (Benign) | Benign fibrous |
| `vascular_lesions` | 0 (Benign) | Angiomas etc. |
```python
MALIGNANT_CLASSES = {"melanoma", "basal_cell_carcinoma", "actinic_keratoses"}
label = 1 if item["dx"] in MALIGNANT_CLASSES else 0
```
## Preprocessing
- **Resize**: 384x384 pixels
- **Normalization**: ImageNet stats (mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225])
- **Augmentation** (train only): RandomResizedCrop, Flips, Rotation, ColorJitter, CoarseDropout, CLAHE
- **Oversampling**: Malignant samples repeated 3x
## Model Performance (DermaLens V3)
| Metric | Value |
|--------|-------|
| Test ROC-AUC | **0.9753** |
| Test PR-AUC | **0.9127** |
| Test F1 | **0.8457** |
| Sensitivity | 94% |
| Specificity | 91% |
Model weights: [`dheraingoud/dermalens-model`](https://huggingface.co/dheraingoud/dermalens-model)