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"""Model, optimizer, and checkpoint setup for metadata training."""
from __future__ import annotations
import argparse
from pathlib import Path
import torch
from milk10k_effb2_metadata.checkpoints import (
infer_checkpoint_backend,
load_encoder_checkpoint,
resolve_backbone_backends,
)
from milk10k_effb2_metadata.models import (
DualEffB2MetadataClassifier,
is_one_encoder_image_fusion,
model_class_for_backbone,
)
def load_model_state_compat(model: DualEffB2MetadataClassifier, state: dict[str, torch.Tensor]) -> None:
"""Load checkpoints created before LWS added the class_scales parameter."""
incompatible = model.load_state_dict(state, strict=False)
missing = set(incompatible.missing_keys)
unexpected = set(incompatible.unexpected_keys)
allowed_missing = {"class_scales"}
if missing - allowed_missing or unexpected:
raise RuntimeError(
f"Checkpoint state mismatch: missing={sorted(missing)}, unexpected={sorted(unexpected)}"
)
if "class_scales" in missing:
model.class_scales.data.fill_(1.0)
def infer_branch_backend_from_state(state: dict[str, torch.Tensor], branch_prefix: str) -> str:
keys = [key.removeprefix(branch_prefix) for key in state if key.startswith(branch_prefix)]
timm_prefixes = ("conv_stem.", "bn1.", "blocks.", "conv_head.", "bn2.", "stages.", "stem.")
torchvision_prefixes = ("features.", "avgpool.", "classifier.")
timm_hits = sum(key.startswith(timm_prefixes) for key in keys)
torchvision_hits = sum(key.startswith(torchvision_prefixes) for key in keys)
if timm_hits > torchvision_hits:
return "timm"
if torchvision_hits > timm_hits:
return "torchvision"
if any(key.startswith("layer") for key in keys):
return "timm"
raise RuntimeError(f"Cannot infer backend for resume checkpoint branch prefix {branch_prefix!r}.")
def resolve_training_backbone_backends(args: argparse.Namespace, device: torch.device) -> tuple[str, str]:
image_fusion = getattr(args, "image_fusion", "concat")
if is_one_encoder_image_fusion(image_fusion):
if args.backbone_backend != "auto":
return args.backbone_backend, args.backbone_backend
if args.resume_checkpoint is not None:
checkpoint = torch.load(args.resume_checkpoint.expanduser().resolve(), map_location=device, weights_only=False)
state = checkpoint["model_state"]
backend = infer_branch_backend_from_state(state, "shared_encoder.")
checkpoint_args = checkpoint.get("args", {})
if checkpoint_args.get("backbone") and args.backbone == "efficientnet_b2":
args.backbone = checkpoint_args["backbone"]
print(f"Auto-detected resume shared backend: shared={backend}")
return backend, backend
print("One-encoder image fusion: using timm backbone initialized from ImageNet weights.")
return "timm", "timm"
if args.backbone_backend != "auto":
return args.backbone_backend, args.backbone_backend
if args.clinical_checkpoint is not None and args.dermoscopic_checkpoint is not None:
return resolve_backbone_backends(args, device)
if args.clinical_checkpoint is not None:
clinical_backend = infer_checkpoint_backend(args.clinical_checkpoint, device, "clinical")
print(
"Auto-detected clinical backbone backend: "
f"clinical={clinical_backend}, dermoscopic={clinical_backend} (ImageNet initialized)"
)
return clinical_backend, clinical_backend
if args.dermoscopic_checkpoint is not None:
dermoscopic_backend = infer_checkpoint_backend(args.dermoscopic_checkpoint, device, "dermoscopic")
print(
"Auto-detected dermoscopic backbone backend: "
f"clinical={dermoscopic_backend} (ImageNet initialized), dermoscopic={dermoscopic_backend}"
)
return dermoscopic_backend, dermoscopic_backend
if args.resume_checkpoint is None:
print("No branch checkpoints passed; using timm backbones initialized from ImageNet weights.")
return "timm", "timm"
checkpoint = torch.load(args.resume_checkpoint.expanduser().resolve(), map_location=device, weights_only=False)
state = checkpoint["model_state"]
clinical_backend = infer_branch_backend_from_state(state, "clinical_encoder.")
dermoscopic_backend = infer_branch_backend_from_state(state, "dermoscopic_encoder.")
checkpoint_args = checkpoint.get("args", {})
if checkpoint_args.get("backbone") and args.backbone == "efficientnet_b2":
args.backbone = checkpoint_args["backbone"]
print(f"Auto-detected resume backends: clinical={clinical_backend}, dermoscopic={dermoscopic_backend}")
return clinical_backend, dermoscopic_backend
def build_optimizer(
model: DualEffB2MetadataClassifier,
args: argparse.Namespace,
encoders_trainable: bool,
) -> torch.optim.Optimizer:
head_params = []
encoder_params = []
metadata_params = []
for name, param in model.named_parameters():
if not param.requires_grad:
continue
if name.startswith(("clinical_encoder.", "dermoscopic_encoder.", "shared_encoder.")):
encoder_params.append(param)
elif name.startswith(
(
"metadata_head.",
"clinical_metadata_gate.",
"dermoscopic_metadata_gate.",
"shared_metadata_gate.",
)
):
metadata_params.append(param)
else:
head_params.append(param)
groups = [{"params": head_params, "lr": args.head_lr}]
if metadata_params:
groups.append({"params": metadata_params, "lr": args.metadata_lr if args.metadata_lr is not None else args.head_lr})
if encoders_trainable and encoder_params:
groups.append({"params": encoder_params, "lr": args.encoder_lr})
return torch.optim.AdamW(groups, weight_decay=args.weight_decay)
def set_metadata_head_trainable(model: DualEffB2MetadataClassifier, trainable: bool) -> None:
for param in model.metadata_head.parameters():
param.requires_grad = trainable
for module_name in ("clinical_metadata_gate", "dermoscopic_metadata_gate", "shared_metadata_gate"):
module = getattr(model, module_name, None)
if module is not None:
for param in module.parameters():
param.requires_grad = trainable
def load_resume_checkpoint(
checkpoint_path: Path | None,
model: DualEffB2MetadataClassifier,
device: torch.device,
ema_model: torch.nn.Module | None = None,
) -> tuple[int, float, str | None]:
if checkpoint_path is None:
return 1, float("-inf"), None
checkpoint_path = checkpoint_path.expanduser().resolve()
if not checkpoint_path.exists():
raise FileNotFoundError(f"Resume checkpoint not found: {checkpoint_path}")
checkpoint = torch.load(checkpoint_path, map_location=device, weights_only=False)
load_model_state_compat(model, checkpoint["model_state"])
if ema_model is not None and "ema_model_state" in checkpoint:
ema_model.load_state_dict(checkpoint["ema_model_state"])
next_epoch = int(checkpoint.get("epoch", 0)) + 1
best_val_f1 = float(
checkpoint.get(
"best_selection_metric",
checkpoint.get("best_val_f1_macro", float("-inf")),
)
)
phase = checkpoint.get("phase")
selection_metric_name = checkpoint.get("selection_metric_name", "f1_macro")
print(
f"Resumed checkpoint: {checkpoint_path}, phase={phase}, "
f"last_epoch={next_epoch - 1}, best_{selection_metric_name}={best_val_f1:.4f}"
)
print("Optimizer is re-created from current CLI LR settings.")
return next_epoch, best_val_f1, str(phase) if phase is not None else None
def build_model(
class_names: list[str],
metadata_dim: int,
args: argparse.Namespace,
device: torch.device,
clinical_backbone_backend: str,
dermoscopic_backbone_backend: str,
) -> DualEffB2MetadataClassifier:
model_class = model_class_for_backbone(args.backbone)
model = model_class(
num_classes=len(class_names),
metadata_input_dim=metadata_dim,
branch_dim=args.branch_dim,
metadata_dim=args.metadata_dim,
classifier_hidden_dim=args.classifier_hidden_dim,
dropout=args.dropout,
imagenet_pretrained=args.imagenet_pretrained,
clinical_backbone_backend=clinical_backbone_backend,
dermoscopic_backbone_backend=dermoscopic_backbone_backend,
backbone=args.backbone,
disable_metadata=args.disable_metadata,
metadata_fusion=args.metadata_fusion,
image_fusion=getattr(args, "image_fusion", "concat"),
metadata_gate_hidden_dim=args.metadata_gate_hidden_dim,
classifier_style=getattr(args, "classifier_style", "legacy"),
logit_fusion_mode=args.logit_fusion_mode,
fusion_logit_weight=args.fusion_logit_weight,
clinical_logit_weight=args.clinical_logit_weight,
dermoscopic_logit_weight=args.dermoscopic_logit_weight,
).to(device)
if args.resume_checkpoint is None and not is_one_encoder_image_fusion(getattr(args, "image_fusion", "concat")):
if args.clinical_checkpoint is not None:
load_encoder_checkpoint(args.clinical_checkpoint, model.clinical_encoder, "clinical", device)
if args.dermoscopic_checkpoint is not None:
load_encoder_checkpoint(args.dermoscopic_checkpoint, model.dermoscopic_encoder, "dermoscopic", device)
if args.disable_metadata or args.freeze_metadata_head:
set_metadata_head_trainable(model, False)
return model